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Editing gene: CAPRIN1 (CAeditome ID:4076)

Gene summary for CAPRIN1

Gene summary

Gene information	Gene symbol	CAPRIN1
	Gene ID	4076
	Gene name	cell cycle associated protein 1
	Synonyms	GPIAP1\|GPIP137\|GRIP137\|M11S1\|RNG105\|p137GPI
	Cytomap	11p13
	Type of gene	protein-coding
	Description	caprin-1GPI-anchored membrane protein 1GPI-anchored protein p137GPI-p137RNA granule protein 105activation/proliferation-associated protein 1caprin 1cytoplasmic activation- and proliferation-associated protein 1cytoplasmic activation/proliferation-
	Modification date	20210518
	UniProtAcc	Q14444
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene	GO ID	GO term	PubMed ID
CAPRIN1	GO:0005737	Caprin-1	28733330
CAPRIN1	GO:0005829	Caprin-1	0000052
CAPRIN1	GO:0031252	Caprin-1	28733330

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RNA A-to-I events for CAPRIN1

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000135387.18

RNA A-to-I editing events in Cancer.

CAediting_805281(34057796, +), CAediting_805282(34058000, +), CAediting_805283(34059434, +), CAediting_805284(34059941, +), CAediting_805285(34060034, +), CAediting_805286(34060035, +), CAediting_805287(34060044, +), CAediting_805288(34060045, +), CAediting_805289(34060046, +), CAediting_805290(34060065, +), CAediting_805291(34060128, +), CAediting_805292(34060359, +), CAediting_805293(34060361, +), CAediting_805294(34060365, +), CAediting_805295(34060439, +), CAediting_805296(34060440, +), CAediting_805297(34060457, +), CAediting_805298(34060467, +), CAediting_805299(34060622, +), CAediting_805300(34060626, +), CAediting_805301(34060629, +), CAediting_805302(34060630, +), CAediting_805303(34060666, +), CAediting_805304(34060669, +), CAediting_805305(34060672, +), CAediting_805306(34060673, +), CAediting_805307(34060689, +), CAediting_805308(34060713, +), CAediting_805309(34060714, +), CAediting_805310(34060715, +), CAediting_805311(34060721, +), CAediting_805312(34060722, +), CAediting_805313(34060723, +), CAediting_805314(34060736, +), CAediting_805315(34060739, +), CAediting_805316(34060768, +), CAediting_805317(34060769, +), CAediting_805318(34061270, +), CAediting_805319(34061276, +), CAediting_805320(34061287, +), CAediting_805321(34061324, +), CAediting_805322(34061332, +), CAediting_805323(34061333, +), CAediting_805324(34061336, +), CAediting_805325(34061388, +), CAediting_805326(34061391, +), CAediting_805327(34061417, +), CAediting_805328(34061442, +), CAediting_805329(34061470, +), CAediting_805330(34061714, +), CAediting_805331(34061795, +), CAediting_805332(34061806, +), CAediting_805333(34061809, +), CAediting_805334(34061810, +), CAediting_805335(34061812, +), CAediting_805336(34061815, +), CAediting_805337(34061834, +), CAediting_805338(34061873, +), CAediting_805339(34061877, +), CAediting_805340(34061880, +), CAediting_805341(34061883, +), CAediting_805342(34061899, +), CAediting_805343(34061903, +), CAediting_805344(34061919, +), CAediting_805345(34061920, +), CAediting_805346(34061927, +), CAediting_805347(34061933, +), CAediting_805348(34061983, +), CAediting_805349(34061985, +), CAediting_805350(34062074, +), CAediting_805351(34062077, +), CAediting_805352(34062078, +), CAediting_805353(34062132, +), CAediting_805354(34062504, +), CAediting_805355(34063870, +), CAediting_805356(34065477, +), CAediting_805357(34070507, +), CAediting_805358(34070534, +), CAediting_805359(34071309, +), CAediting_805360(34071387, +), CAediting_805361(34071398, +), CAediting_805362(34071400, +), CAediting_805363(34071401, +), CAediting_805364(34071407, +), CAediting_805365(34071418, +), CAediting_805366(34071444, +), CAediting_805367(34071445, +), CAediting_805368(34071450, +), CAediting_805369(34071459, +), CAediting_805370(34076765, +), CAediting_805371(34076792, +), CAediting_805372(34076798, +), CAediting_805373(34076808, +), CAediting_805374(34076810, +), CAediting_805375(34076813, +), CAediting_805376(34076814, +), CAediting_805377(34076864, +), CAediting_805378(34076874, +), CAediting_805379(34076876, +), CAediting_805380(34079152, +), CAediting_805381(34079153, +), CAediting_805382(34079209, +), CAediting_805383(34079214, +), CAediting_805384(34079222, +), CAediting_805385(34079224, +), CAediting_805386(34079240, +), CAediting_805387(34079242, +), CAediting_805388(34079244, +), CAediting_805389(34079247, +), CAediting_805390(34079249, +), CAediting_805391(34079250, +), CAediting_805392(34079280, +), CAediting_805393(34079332, +), CAediting_805394(34079341, +), CAediting_805395(34079345, +), CAediting_805396(34079355, +), CAediting_805397(34082410, +), CAediting_805398(34083794, +), CAediting_805399(34083865, +), CAediting_805400(34084137, +), CAediting_805401(34084139, +), CAediting_805402(34084183, +), CAediting_805403(34084189, +), CAediting_805404(34084206, +), CAediting_805405(34084215, +), CAediting_805406(34084228, +), CAediting_805407(34084237, +), CAediting_805408(34085558, +), CAediting_805409(34085570, +), CAediting_805410(34085586, +), CAediting_805411(34085592, +), CAediting_805412(34085644, +), CAediting_805413(34085693, +), CAediting_805414(34088041, +), CAediting_805415(34088120, +), CAediting_805416(34088132, +), CAediting_805417(34088166, +), CAediting_805418(34088184, +), CAediting_805419(34088188, +), CAediting_805420(34088202, +), CAediting_805421(34088280, +), CAediting_805422(34088392, +), CAediting_805423(34088479, +), CAediting_805424(34088535, +), CAediting_805425(34088568, +), CAediting_805426(34088571, +), CAediting_805427(34089013, +), CAediting_805428(34089044, +), CAediting_805429(34089068, +), CAediting_805430(34089070, +), CAediting_805431(34089092, +), CAediting_805432(34089093, +), CAediting_805433(34089104, +), CAediting_805434(34089107, +), CAediting_805435(34089109, +), CAediting_805436(34089110, +), CAediting_805437(34089113, +), CAediting_805438(34089116, +), CAediting_805439(34089148, +), CAediting_805440(34089178, +), CAediting_805441(34089184, +), CAediting_805442(34089189, +), CAediting_805443(34092504, +), CAediting_805444(34092589, +), CAediting_805445(34092630, +), CAediting_805446(34092884, +), CAediting_805447(34092940, +), CAediting_805448(34092953, +), CAediting_805449(34092998, +), CAediting_805450(34093024, +), CAediting_805451(34093084, +), CAediting_805452(34093260, +), CAediting_805453(34093736, +), CAediting_805454(34093737, +), CAediting_805455(34093749, +), CAediting_805456(34093762, +), CAediting_805457(34093763, +), CAediting_805458(34093822, +), CAediting_805459(34094253, +), CAediting_805460(34094290, +), CAediting_805461(34094317, +), CAediting_805462(34094318, +), CAediting_805463(34094547, +), CAediting_805464(34094555, +), CAediting_805465(34094556, +), CAediting_805466(34094650, +), CAediting_805467(34094676, +), CAediting_805468(34094690, +), CAediting_805469(34094699, +), CAediting_805470(34094717, +), CAediting_805471(34094722, +), CAediting_805472(34094905, +), CAediting_805473(34094907, +), CAediting_805474(34094933, +), CAediting_805475(34094960, +), CAediting_805476(34094976, +), CAediting_805477(34094983, +), CAediting_805478(34094987, +), CAediting_805479(34095008, +), CAediting_805480(34095012, +), CAediting_805481(34095028, +), CAediting_805482(34095035, +), CAediting_805483(34095116, +), CAediting_805484(34095170, +), CAediting_805485(34095173, +), CAediting_805486(34098464, +),

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RNA editing positional annotations for CAPRIN1 using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_805281	chr11_34057796_+	ncRNA_intronic
CAediting_805282	chr11_34058000_+	ncRNA_intronic
CAediting_805283	chr11_34059434_+	ncRNA_intronic
CAediting_805284	chr11_34059941_+	ncRNA_intronic
CAediting_805285	chr11_34060034_+	ncRNA_intronic
CAediting_805286	chr11_34060035_+	ncRNA_intronic
CAediting_805287	chr11_34060044_+	ncRNA_intronic
CAediting_805288	chr11_34060045_+	ncRNA_intronic
CAediting_805289	chr11_34060046_+	ncRNA_intronic
CAediting_805290	chr11_34060065_+	ncRNA_intronic
CAediting_805291	chr11_34060128_+	ncRNA_intronic
CAediting_805292	chr11_34060359_+	ncRNA_intronic
CAediting_805293	chr11_34060361_+	ncRNA_intronic
CAediting_805294	chr11_34060365_+	ncRNA_intronic
CAediting_805295	chr11_34060439_+	ncRNA_intronic
CAediting_805296	chr11_34060440_+	ncRNA_intronic
CAediting_805297	chr11_34060457_+	ncRNA_intronic
CAediting_805298	chr11_34060467_+	ncRNA_intronic
CAediting_805299	chr11_34060622_+	ncRNA_intronic
CAediting_805300	chr11_34060626_+	ncRNA_intronic
CAediting_805301	chr11_34060629_+	ncRNA_intronic
CAediting_805302	chr11_34060630_+	ncRNA_intronic
CAediting_805303	chr11_34060666_+	ncRNA_intronic
CAediting_805304	chr11_34060669_+	ncRNA_intronic
CAediting_805305	chr11_34060672_+	ncRNA_intronic
CAediting_805306	chr11_34060673_+	ncRNA_intronic
CAediting_805307	chr11_34060689_+	ncRNA_intronic
CAediting_805308	chr11_34060713_+	ncRNA_intronic
CAediting_805309	chr11_34060714_+	ncRNA_intronic
CAediting_805310	chr11_34060715_+	ncRNA_intronic
CAediting_805311	chr11_34060721_+	ncRNA_intronic
CAediting_805312	chr11_34060722_+	ncRNA_intronic
CAediting_805313	chr11_34060723_+	ncRNA_intronic
CAediting_805314	chr11_34060736_+	ncRNA_intronic
CAediting_805315	chr11_34060739_+	ncRNA_intronic
CAediting_805316	chr11_34060768_+	ncRNA_intronic
CAediting_805317	chr11_34060769_+	ncRNA_intronic
CAediting_805318	chr11_34061270_+	ncRNA_intronic
CAediting_805319	chr11_34061276_+	ncRNA_intronic
CAediting_805320	chr11_34061287_+	ncRNA_intronic
CAediting_805321	chr11_34061324_+	ncRNA_intronic
CAediting_805322	chr11_34061332_+	ncRNA_intronic
CAediting_805323	chr11_34061333_+	ncRNA_intronic
CAediting_805324	chr11_34061336_+	ncRNA_intronic
CAediting_805325	chr11_34061388_+	ncRNA_intronic
CAediting_805326	chr11_34061391_+	ncRNA_intronic
CAediting_805327	chr11_34061417_+	ncRNA_intronic
CAediting_805328	chr11_34061442_+	ncRNA_intronic
CAediting_805329	chr11_34061470_+	ncRNA_intronic
CAediting_805330	chr11_34061714_+	ncRNA_intronic
CAediting_805331	chr11_34061795_+	ncRNA_intronic
CAediting_805332	chr11_34061806_+	ncRNA_intronic
CAediting_805333	chr11_34061809_+	ncRNA_intronic
CAediting_805334	chr11_34061810_+	ncRNA_intronic
CAediting_805335	chr11_34061812_+	ncRNA_intronic
CAediting_805336	chr11_34061815_+	ncRNA_intronic
CAediting_805337	chr11_34061834_+	ncRNA_intronic
CAediting_805338	chr11_34061873_+	ncRNA_intronic
CAediting_805339	chr11_34061877_+	ncRNA_intronic
CAediting_805340	chr11_34061880_+	ncRNA_intronic
CAediting_805341	chr11_34061883_+	ncRNA_intronic
CAediting_805342	chr11_34061899_+	ncRNA_intronic
CAediting_805343	chr11_34061903_+	ncRNA_intronic
CAediting_805344	chr11_34061919_+	ncRNA_intronic
CAediting_805345	chr11_34061920_+	ncRNA_intronic
CAediting_805346	chr11_34061927_+	ncRNA_intronic
CAediting_805347	chr11_34061933_+	ncRNA_intronic
CAediting_805348	chr11_34061983_+	ncRNA_intronic
CAediting_805349	chr11_34061985_+	ncRNA_intronic
CAediting_805350	chr11_34062074_+	ncRNA_intronic
CAediting_805351	chr11_34062077_+	ncRNA_intronic
CAediting_805352	chr11_34062078_+	ncRNA_intronic
CAediting_805353	chr11_34062132_+	ncRNA_intronic
CAediting_805354	chr11_34062504_+	ncRNA_intronic
CAediting_805355	chr11_34063870_+	ncRNA_intronic
CAediting_805356	chr11_34065477_+	ncRNA_intronic
CAediting_805357	chr11_34070507_+	ncRNA_intronic
CAediting_805358	chr11_34070534_+	ncRNA_intronic
CAediting_805359	chr11_34071309_+	ncRNA_intronic
CAediting_805360	chr11_34071387_+	ncRNA_intronic
CAediting_805361	chr11_34071398_+	ncRNA_intronic
CAediting_805362	chr11_34071400_+	ncRNA_intronic
CAediting_805363	chr11_34071401_+	ncRNA_intronic
CAediting_805364	chr11_34071407_+	ncRNA_intronic
CAediting_805365	chr11_34071418_+	ncRNA_intronic
CAediting_805366	chr11_34071444_+	ncRNA_intronic
CAediting_805367	chr11_34071445_+	ncRNA_intronic
CAediting_805368	chr11_34071450_+	ncRNA_intronic
CAediting_805369	chr11_34071459_+	ncRNA_intronic
CAediting_805370	chr11_34076765_+	ncRNA_intronic
CAediting_805371	chr11_34076792_+	ncRNA_intronic
CAediting_805372	chr11_34076798_+	ncRNA_intronic
CAediting_805373	chr11_34076808_+	ncRNA_intronic
CAediting_805374	chr11_34076810_+	ncRNA_intronic
CAediting_805375	chr11_34076813_+	ncRNA_intronic
CAediting_805376	chr11_34076814_+	ncRNA_intronic
CAediting_805377	chr11_34076864_+	ncRNA_intronic
CAediting_805378	chr11_34076874_+	ncRNA_intronic
CAediting_805379	chr11_34076876_+	ncRNA_intronic
CAediting_805380	chr11_34079152_+	ncRNA_intronic
CAediting_805381	chr11_34079153_+	ncRNA_intronic
CAediting_805382	chr11_34079209_+	ncRNA_intronic
CAediting_805383	chr11_34079214_+	ncRNA_intronic
CAediting_805384	chr11_34079222_+	ncRNA_intronic
CAediting_805385	chr11_34079224_+	ncRNA_intronic
CAediting_805386	chr11_34079240_+	ncRNA_intronic
CAediting_805387	chr11_34079242_+	ncRNA_intronic
CAediting_805388	chr11_34079244_+	ncRNA_intronic
CAediting_805389	chr11_34079247_+	ncRNA_intronic
CAediting_805390	chr11_34079249_+	ncRNA_intronic
CAediting_805391	chr11_34079250_+	ncRNA_intronic
CAediting_805392	chr11_34079280_+	ncRNA_intronic
CAediting_805393	chr11_34079332_+	ncRNA_intronic
CAediting_805394	chr11_34079341_+	ncRNA_intronic
CAediting_805395	chr11_34079345_+	ncRNA_intronic
CAediting_805396	chr11_34079355_+	ncRNA_intronic
CAediting_805397	chr11_34082410_+	ncRNA_intronic
CAediting_805398	chr11_34083794_+	ncRNA_intronic
CAediting_805399	chr11_34083865_+	ncRNA_intronic
CAediting_805400	chr11_34084137_+	ncRNA_intronic
CAediting_805401	chr11_34084139_+	ncRNA_intronic
CAediting_805402	chr11_34084183_+	ncRNA_intronic
CAediting_805403	chr11_34084189_+	ncRNA_intronic
CAediting_805404	chr11_34084206_+	ncRNA_intronic
CAediting_805405	chr11_34084215_+	ncRNA_intronic
CAediting_805406	chr11_34084228_+	ncRNA_intronic
CAediting_805407	chr11_34084237_+	ncRNA_intronic
CAediting_805408	chr11_34085558_+	ncRNA_intronic
CAediting_805409	chr11_34085570_+	ncRNA_intronic
CAediting_805410	chr11_34085586_+	ncRNA_intronic
CAediting_805411	chr11_34085592_+	ncRNA_intronic
CAediting_805412	chr11_34085644_+	ncRNA_intronic
CAediting_805413	chr11_34085693_+	ncRNA_intronic
CAediting_805414	chr11_34088041_+	ncRNA_intronic
CAediting_805415	chr11_34088120_+	ncRNA_intronic
CAediting_805416	chr11_34088132_+	ncRNA_intronic
CAediting_805417	chr11_34088166_+	ncRNA_intronic
CAediting_805418	chr11_34088184_+	ncRNA_intronic
CAediting_805419	chr11_34088188_+	ncRNA_intronic
CAediting_805420	chr11_34088202_+	ncRNA_intronic
CAediting_805421	chr11_34088280_+	ncRNA_intronic
CAediting_805422	chr11_34088392_+	ncRNA_intronic
CAediting_805423	chr11_34088479_+	ncRNA_intronic
CAediting_805424	chr11_34088535_+	ncRNA_intronic
CAediting_805425	chr11_34088568_+	ncRNA_intronic
CAediting_805426	chr11_34088571_+	ncRNA_intronic
CAediting_805427	chr11_34089013_+	ncRNA_intronic
CAediting_805428	chr11_34089044_+	ncRNA_intronic
CAediting_805429	chr11_34089068_+	ncRNA_intronic
CAediting_805430	chr11_34089070_+	ncRNA_intronic
CAediting_805431	chr11_34089092_+	ncRNA_intronic
CAediting_805432	chr11_34089093_+	ncRNA_intronic
CAediting_805433	chr11_34089104_+	ncRNA_intronic
CAediting_805434	chr11_34089107_+	ncRNA_intronic
CAediting_805435	chr11_34089109_+	ncRNA_intronic
CAediting_805436	chr11_34089110_+	ncRNA_intronic
CAediting_805437	chr11_34089113_+	ncRNA_intronic
CAediting_805438	chr11_34089116_+	ncRNA_intronic
CAediting_805439	chr11_34089148_+	ncRNA_intronic
CAediting_805440	chr11_34089178_+	ncRNA_intronic
CAediting_805441	chr11_34089184_+	ncRNA_intronic
CAediting_805442	chr11_34089189_+	ncRNA_intronic
CAediting_805443	chr11_34092504_+	ncRNA_intronic
CAediting_805444	chr11_34092589_+	ncRNA_intronic
CAediting_805445	chr11_34092630_+	ncRNA_intronic
CAediting_805446	chr11_34092884_+	ncRNA_intronic
CAediting_805447	chr11_34092940_+	ncRNA_intronic
CAediting_805448	chr11_34092953_+	ncRNA_intronic
CAediting_805449	chr11_34092998_+	ncRNA_intronic
CAediting_805450	chr11_34093024_+	ncRNA_intronic
CAediting_805451	chr11_34093084_+	ncRNA_intronic
CAediting_805452	chr11_34093260_+	ncRNA_intronic
CAediting_805453	chr11_34093736_+	ncRNA_intronic
CAediting_805454	chr11_34093737_+	ncRNA_intronic
CAediting_805455	chr11_34093749_+	ncRNA_intronic
CAediting_805456	chr11_34093762_+	ncRNA_intronic
CAediting_805457	chr11_34093763_+	ncRNA_intronic
CAediting_805458	chr11_34093822_+	ncRNA_intronic
CAediting_805459	chr11_34094253_+	ncRNA_intronic
CAediting_805460	chr11_34094290_+	ncRNA_intronic
CAediting_805461	chr11_34094317_+	ncRNA_intronic
CAediting_805462	chr11_34094318_+	ncRNA_intronic
CAediting_805463	chr11_34094547_+	ncRNA_intronic
CAediting_805464	chr11_34094555_+	ncRNA_intronic
CAediting_805465	chr11_34094556_+	ncRNA_intronic
CAediting_805466	chr11_34094650_+	ncRNA_intronic
CAediting_805467	chr11_34094676_+	ncRNA_intronic
CAediting_805468	chr11_34094690_+	ncRNA_intronic
CAediting_805469	chr11_34094699_+	ncRNA_intronic
CAediting_805470	chr11_34094717_+	ncRNA_intronic
CAediting_805471	chr11_34094722_+	ncRNA_intronic
CAediting_805472	chr11_34094905_+	ncRNA_intronic
CAediting_805473	chr11_34094907_+	ncRNA_intronic
CAediting_805474	chr11_34094933_+	ncRNA_intronic
CAediting_805475	chr11_34094960_+	ncRNA_intronic
CAediting_805476	chr11_34094976_+	ncRNA_intronic
CAediting_805477	chr11_34094983_+	ncRNA_intronic
CAediting_805478	chr11_34094987_+	ncRNA_intronic
CAediting_805479	chr11_34095008_+	ncRNA_intronic
CAediting_805480	chr11_34095012_+	ncRNA_intronic
CAediting_805481	chr11_34095028_+	ncRNA_intronic
CAediting_805482	chr11_34095035_+	ncRNA_intronic
CAediting_805483	chr11_34095116_+	ncRNA_intronic
CAediting_805484	chr11_34095170_+	ncRNA_intronic
CAediting_805485	chr11_34095173_+	ncRNA_intronic
CAediting_805486	chr11_34098464_+	ncRNA_intronic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_805281	chr11_34057796_+	SINE	Alu	AluSq2
CAediting_805282	chr11_34058000_+	SINE	Alu	AluSq2
CAediting_805283	chr11_34059434_+	SINE	Alu	AluSx3
CAediting_805284	chr11_34059941_+	SINE	Alu	AluSx
CAediting_805285	chr11_34060034_+	SINE	Alu	AluSx
CAediting_805286	chr11_34060035_+	SINE	Alu	AluSx
CAediting_805287	chr11_34060044_+	SINE	Alu	AluSx
CAediting_805288	chr11_34060045_+	SINE	Alu	AluSx
CAediting_805289	chr11_34060046_+	SINE	Alu	AluSx
CAediting_805290	chr11_34060065_+	SINE	Alu	AluSx
CAediting_805291	chr11_34060128_+	SINE	Alu	AluSx
CAediting_805292	chr11_34060359_+	SINE	Alu	AluJo
CAediting_805293	chr11_34060361_+	SINE	Alu	AluJo
CAediting_805294	chr11_34060365_+	SINE	Alu	AluJo
CAediting_805295	chr11_34060439_+	SINE	Alu	AluJo
CAediting_805296	chr11_34060440_+	SINE	Alu	AluJo
CAediting_805297	chr11_34060457_+	SINE	Alu	AluJo
CAediting_805298	chr11_34060467_+	SINE	Alu	AluJo
CAediting_805307	chr11_34060689_+	LINE	CR1	L3
CAediting_805308	chr11_34060713_+	LINE	CR1	L3
CAediting_805309	chr11_34060714_+	LINE	CR1	L3
CAediting_805310	chr11_34060715_+	LINE	CR1	L3
CAediting_805311	chr11_34060721_+	LINE	CR1	L3
CAediting_805312	chr11_34060722_+	LINE	CR1	L3
CAediting_805313	chr11_34060723_+	LINE	CR1	L3
CAediting_805314	chr11_34060736_+	LINE	CR1	L3
CAediting_805315	chr11_34060739_+	LINE	CR1	L3
CAediting_805318	chr11_34061270_+	SINE	Alu	AluSq2
CAediting_805319	chr11_34061276_+	SINE	Alu	AluSq2
CAediting_805320	chr11_34061287_+	SINE	Alu	AluSq2
CAediting_805321	chr11_34061324_+	SINE	Alu	AluSq2
CAediting_805322	chr11_34061332_+	SINE	Alu	AluSq2
CAediting_805323	chr11_34061333_+	SINE	Alu	AluSq2
CAediting_805324	chr11_34061336_+	SINE	Alu	AluSq2
CAediting_805325	chr11_34061388_+	SINE	Alu	AluSq2
CAediting_805326	chr11_34061391_+	SINE	Alu	AluSq2
CAediting_805327	chr11_34061417_+	SINE	Alu	AluSq2
CAediting_805328	chr11_34061442_+	SINE	Alu	AluSq2
CAediting_805329	chr11_34061470_+	SINE	Alu	AluSq2
CAediting_805330	chr11_34061714_+	SINE	Alu	AluSx
CAediting_805331	chr11_34061795_+	SINE	Alu	AluSx
CAediting_805332	chr11_34061806_+	SINE	Alu	AluSx
CAediting_805333	chr11_34061809_+	SINE	Alu	AluSx
CAediting_805334	chr11_34061810_+	SINE	Alu	AluSx
CAediting_805335	chr11_34061812_+	SINE	Alu	AluSx
CAediting_805336	chr11_34061815_+	SINE	Alu	AluSx
CAediting_805337	chr11_34061834_+	SINE	Alu	AluSx
CAediting_805338	chr11_34061873_+	SINE	Alu	AluSx
CAediting_805339	chr11_34061877_+	SINE	Alu	AluSx
CAediting_805340	chr11_34061880_+	SINE	Alu	AluSx
CAediting_805341	chr11_34061883_+	SINE	Alu	AluSx
CAediting_805342	chr11_34061899_+	SINE	Alu	AluSx
CAediting_805343	chr11_34061903_+	SINE	Alu	AluSx
CAediting_805344	chr11_34061919_+	SINE	Alu	AluSx
CAediting_805345	chr11_34061920_+	SINE	Alu	AluSx
CAediting_805346	chr11_34061927_+	SINE	Alu	AluSx
CAediting_805347	chr11_34061933_+	SINE	Alu	AluSx
CAediting_805348	chr11_34061983_+	SINE	Alu	AluSx
CAediting_805349	chr11_34061985_+	SINE	Alu	AluSx
CAediting_805350	chr11_34062074_+	LINE	CR1	L3
CAediting_805351	chr11_34062077_+	LINE	CR1	L3
CAediting_805352	chr11_34062078_+	LINE	CR1	L3
CAediting_805354	chr11_34062504_+	SINE	Alu	AluY
CAediting_805355	chr11_34063870_+	SINE	Alu	AluSp
CAediting_805356	chr11_34065477_+	DNA	hAT-Charlie	MER5A
CAediting_805357	chr11_34070507_+	SINE	Alu	AluSz
CAediting_805358	chr11_34070534_+	SINE	Alu	AluSz
CAediting_805359	chr11_34071309_+	SINE	Alu	AluSq2
CAediting_805360	chr11_34071387_+	SINE	Alu	AluSq2
CAediting_805361	chr11_34071398_+	SINE	Alu	AluSq2
CAediting_805362	chr11_34071400_+	SINE	Alu	AluSq2
CAediting_805363	chr11_34071401_+	SINE	Alu	AluSq2
CAediting_805364	chr11_34071407_+	SINE	Alu	AluSq2
CAediting_805365	chr11_34071418_+	SINE	Alu	AluSq2
CAediting_805366	chr11_34071444_+	SINE	Alu	AluSq2
CAediting_805367	chr11_34071445_+	SINE	Alu	AluSq2
CAediting_805368	chr11_34071450_+	SINE	Alu	AluSq2
CAediting_805369	chr11_34071459_+	SINE	Alu	AluSq2
CAediting_805370	chr11_34076765_+	SINE	Alu	AluSz
CAediting_805371	chr11_34076792_+	SINE	Alu	AluSz
CAediting_805372	chr11_34076798_+	SINE	Alu	AluSz
CAediting_805373	chr11_34076808_+	SINE	Alu	AluSz
CAediting_805374	chr11_34076810_+	SINE	Alu	AluSz
CAediting_805375	chr11_34076813_+	SINE	Alu	AluSz
CAediting_805376	chr11_34076814_+	SINE	Alu	AluSz
CAediting_805377	chr11_34076864_+	SINE	Alu	AluSz
CAediting_805378	chr11_34076874_+	SINE	Alu	AluSz
CAediting_805379	chr11_34076876_+	SINE	Alu	AluSz
CAediting_805380	chr11_34079152_+	SINE	Alu	AluSz6
CAediting_805381	chr11_34079153_+	SINE	Alu	AluSz6
CAediting_805382	chr11_34079209_+	SINE	Alu	AluSz6
CAediting_805383	chr11_34079214_+	SINE	Alu	AluSz6
CAediting_805384	chr11_34079222_+	SINE	Alu	AluSz6
CAediting_805385	chr11_34079224_+	SINE	Alu	AluSz6
CAediting_805386	chr11_34079240_+	SINE	Alu	AluSz6
CAediting_805387	chr11_34079242_+	SINE	Alu	AluSz6
CAediting_805388	chr11_34079244_+	SINE	Alu	AluSz6
CAediting_805389	chr11_34079247_+	SINE	Alu	AluSz6
CAediting_805390	chr11_34079249_+	SINE	Alu	AluSz6
CAediting_805391	chr11_34079250_+	SINE	Alu	AluSz6
CAediting_805392	chr11_34079280_+	SINE	Alu	AluSz6
CAediting_805393	chr11_34079332_+	SINE	Alu	AluSz6
CAediting_805394	chr11_34079341_+	SINE	Alu	AluSz6
CAediting_805395	chr11_34079345_+	SINE	Alu	AluSz6
CAediting_805396	chr11_34079355_+	SINE	Alu	AluSz6
CAediting_805397	chr11_34082410_+	SINE	Alu	AluSq2
CAediting_805398	chr11_34083794_+	SINE	Alu	AluSz6
CAediting_805399	chr11_34083865_+	SINE	Alu	AluSz6
CAediting_805400	chr11_34084137_+	SINE	Alu	AluSz
CAediting_805401	chr11_34084139_+	SINE	Alu	AluSz
CAediting_805402	chr11_34084183_+	SINE	Alu	AluSz
CAediting_805403	chr11_34084189_+	SINE	Alu	AluSz
CAediting_805404	chr11_34084206_+	SINE	Alu	AluSz
CAediting_805405	chr11_34084215_+	SINE	Alu	AluSz
CAediting_805406	chr11_34084228_+	SINE	Alu	AluSz
CAediting_805407	chr11_34084237_+	SINE	Alu	AluSz
CAediting_805408	chr11_34085558_+	SINE	Alu	AluSg7
CAediting_805409	chr11_34085570_+	SINE	Alu	AluSg7
CAediting_805410	chr11_34085586_+	SINE	Alu	AluSg7
CAediting_805411	chr11_34085592_+	SINE	Alu	AluSg7
CAediting_805412	chr11_34085644_+	SINE	Alu	AluSg7
CAediting_805413	chr11_34085693_+	SINE	Alu	AluSg7
CAediting_805414	chr11_34088041_+	SINE	Alu	AluSc
CAediting_805415	chr11_34088120_+	SINE	Alu	AluSc
CAediting_805416	chr11_34088132_+	SINE	Alu	AluSc
CAediting_805417	chr11_34088166_+	SINE	Alu	AluSc
CAediting_805418	chr11_34088184_+	SINE	Alu	AluSc
CAediting_805419	chr11_34088188_+	SINE	Alu	AluSc
CAediting_805420	chr11_34088202_+	SINE	Alu	AluSc
CAediting_805421	chr11_34088280_+	SINE	Alu	AluSc
CAediting_805422	chr11_34088392_+	SINE	Alu	AluJo
CAediting_805423	chr11_34088479_+	SINE	Alu	AluJo
CAediting_805424	chr11_34088535_+	SINE	Alu	AluJo
CAediting_805425	chr11_34088568_+	SINE	Alu	AluJo
CAediting_805426	chr11_34088571_+	SINE	Alu	AluJo
CAediting_805427	chr11_34089013_+	SINE	Alu	AluJb
CAediting_805428	chr11_34089044_+	SINE	Alu	AluJb
CAediting_805429	chr11_34089068_+	SINE	Alu	AluJb
CAediting_805430	chr11_34089070_+	SINE	Alu	AluJb
CAediting_805431	chr11_34089092_+	SINE	Alu	AluJb
CAediting_805432	chr11_34089093_+	SINE	Alu	AluJb
CAediting_805433	chr11_34089104_+	SINE	Alu	AluJb
CAediting_805434	chr11_34089107_+	SINE	Alu	AluJb
CAediting_805435	chr11_34089109_+	SINE	Alu	AluJb
CAediting_805436	chr11_34089110_+	SINE	Alu	AluJb
CAediting_805437	chr11_34089113_+	SINE	Alu	AluJb
CAediting_805438	chr11_34089116_+	SINE	Alu	AluJb
CAediting_805439	chr11_34089148_+	SINE	Alu	AluJb
CAediting_805440	chr11_34089178_+	SINE	Alu	AluJb
CAediting_805441	chr11_34089184_+	SINE	Alu	AluJb
CAediting_805442	chr11_34089189_+	SINE	Alu	AluJb
CAediting_805443	chr11_34092504_+	SINE	Alu	AluSx3
CAediting_805444	chr11_34092589_+	SINE	Alu	AluSx3
CAediting_805445	chr11_34092630_+	SINE	Alu	AluSx3
CAediting_805446	chr11_34092884_+	SINE	Alu	AluJr
CAediting_805447	chr11_34092940_+	SINE	Alu	AluJr
CAediting_805448	chr11_34092953_+	SINE	Alu	AluJr
CAediting_805449	chr11_34092998_+	SINE	Alu	AluJr
CAediting_805450	chr11_34093024_+	SINE	Alu	AluJr
CAediting_805451	chr11_34093084_+	SINE	Alu	AluJr
CAediting_805452	chr11_34093260_+	SINE	Alu	AluJb
CAediting_805453	chr11_34093736_+	SINE	Alu	AluSx3
CAediting_805454	chr11_34093737_+	SINE	Alu	AluSx3
CAediting_805455	chr11_34093749_+	SINE	Alu	AluSx3
CAediting_805456	chr11_34093762_+	SINE	Alu	AluSx3
CAediting_805457	chr11_34093763_+	SINE	Alu	AluSx3
CAediting_805458	chr11_34093822_+	SINE	Alu	AluSx3
CAediting_805460	chr11_34094290_+	SINE	Alu	AluSx
CAediting_805461	chr11_34094317_+	SINE	Alu	AluSx
CAediting_805462	chr11_34094318_+	SINE	Alu	AluSx
CAediting_805463	chr11_34094547_+	SINE	Alu	AluJo
CAediting_805464	chr11_34094555_+	SINE	Alu	AluJo
CAediting_805465	chr11_34094556_+	SINE	Alu	AluJo
CAediting_805466	chr11_34094650_+	SINE	Alu	AluJo
CAediting_805467	chr11_34094676_+	SINE	Alu	AluJo
CAediting_805468	chr11_34094690_+	SINE	Alu	AluJo
CAediting_805469	chr11_34094699_+	SINE	Alu	AluJo
CAediting_805470	chr11_34094717_+	SINE	Alu	AluJo
CAediting_805471	chr11_34094722_+	SINE	Alu	AluJo
CAediting_805472	chr11_34094905_+	SINE	Alu	AluJb
CAediting_805473	chr11_34094907_+	SINE	Alu	AluJb
CAediting_805474	chr11_34094933_+	SINE	Alu	AluJb
CAediting_805475	chr11_34094960_+	SINE	Alu	AluJb
CAediting_805476	chr11_34094976_+	SINE	Alu	AluJb
CAediting_805477	chr11_34094983_+	SINE	Alu	AluJb
CAediting_805478	chr11_34094987_+	SINE	Alu	AluJb
CAediting_805479	chr11_34095008_+	SINE	Alu	AluJb
CAediting_805480	chr11_34095012_+	SINE	Alu	AluJb
CAediting_805481	chr11_34095028_+	SINE	Alu	AluJb
CAediting_805482	chr11_34095035_+	SINE	Alu	AluJb
CAediting_805483	chr11_34095116_+	SINE	Alu	AluJb
CAediting_805484	chr11_34095170_+	SINE	Alu	AluJb
CAediting_805485	chr11_34095173_+	SINE	Alu	AluJb

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RNA A-to-I editing events in the alternative splicing sites for CAPRIN1

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000135387.18.CAPRIN1.

Correlation between RNA A-to-I editing and PSI for ENSG00000135387.18.CAPRIN1.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for CAPRIN1

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for CAPRIN1

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for CAPRIN1

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_524911	chr7_5495852_-	ENSG00000135387.18	ENST00000389645	hsa-miR-589-3p	34097891	34097897	7mer-m8	34097875	34097898	140	-17.97
CAediting_524911	chr7_5495852_-	ENSG00000135387.18	ENST00000530820	hsa-miR-589-3p	34097891	34097897	7mer-m8	34097875	34097898	140	-17.97

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_524911	chr7_5495852_-	ENSG00000135387.18	ENST00000389645	hsa-miR-589-3p	34097804	34097810	7mer-m8	34097788	34097811	149	-16.78
CAediting_980496	chr14_31014685_-	ENSG00000135387.18	ENST00000389645	hsa-miR-624-3p	34098712	34098719	8mer-1a	34098699	34098719	140	-9.76
CAediting_524911	chr7_5495852_-	ENSG00000135387.18	ENST00000530820	hsa-miR-589-3p	34097804	34097810	7mer-m8	34097788	34097811	149	-16.78
CAediting_980496	chr14_31014685_-	ENSG00000135387.18	ENST00000530820	hsa-miR-624-3p	34098712	34098719	8mer-1a	34098699	34098719	140	-9.76

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for CAPRIN1

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST

ENST type

RNA structure without RNA A-to-I editing.

RNA structure with RNA A-to-I editing.

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID

ENST

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

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Relation with ADAR for CAPRIN1

Correlation between ADAR gene expression and RNA editing frequency

Cancer

CAeditomID

position

ADAR1 (p-val)

ADAR1 (coeff.)

ADAR2 (p-val)

ADAR2 (coeff.)

ADAR3 (p-val)

ADAR3 (coeff.)

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Relation with cancer stages for CAPRIN1

Correlation between Cancer stages and RNA editing frequency

Cancer

Stage_type

CAeditomID

position

P-val

Coeff.

Top

Relation with survival for CAPRIN1

Correlation between RNA editing and survival

Cancer

CAeditomID

position

KMpvalue

Coxpvalue

CoxHR

Top

RelatedDrugs for CAPRIN1

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for CAPRIN1

Diseases associated with this gene.
(DisGeNet 7.0)

Gene

Disease ID

Disease name

# pubmeds

Source

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene