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Editing gene: EPCAM (CAeditome ID:4072)

Gene summary for EPCAM

Gene summary

Gene information	Gene symbol	EPCAM
	Gene ID	4072
	Gene name	epithelial cell adhesion molecule
	Synonyms	DIAR5\|EGP-2\|EGP314\|EGP40\|ESA\|HNPCC8\|KS1/4\|KSA\|M4S1\|MIC18\|MK-1\|TACSTD1\|TROP1
	Cytomap	2p21
	Type of gene	protein-coding
	Description	epithelial cell adhesion moleculeadenocarcinoma-associated antigencell surface glycoprotein Trop-1epithelial glycoprotein 314human epithelial glycoprotein-2major gastrointestinal tumor-associated protein GA733-2membrane component, chromosome 4, surf
	Modification date	20210518
	UniProtAcc	P16422
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene	GO ID	GO term	PubMed ID
EPCAM	GO:0044877	Epithelial cell adhesion molecule	19136966
EPCAM	GO:0008284	Epithelial cell adhesion molecule	15195135
EPCAM	GO:0045944	Epithelial cell adhesion molecule	15195135
EPCAM	GO:0045944	Epithelial cell adhesion molecule	15922867
EPCAM	GO:2000048	Epithelial cell adhesion molecule	9382878
EPCAM	GO:0005886	Epithelial cell adhesion molecule	0000052
EPCAM	GO:0005886	Epithelial cell adhesion molecule	15195135
EPCAM	GO:0005886	Epithelial cell adhesion molecule	19785009
EPCAM	GO:0005923	Epithelial cell adhesion molecule	16054130
EPCAM	GO:0016323	Epithelial cell adhesion molecule	18025791
EPCAM	GO:0016324	Epithelial cell adhesion molecule	18025791
EPCAM	GO:0016328	Epithelial cell adhesion molecule	16054130

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RNA A-to-I events for EPCAM

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000119888.9

RNA A-to-I editing events in Cancer.

CAediting_177950(47350526, +), CAediting_177951(47350879, +), CAediting_177952(47350919, +), CAediting_177953(47350923, +), CAediting_177954(47351203, +), CAediting_177955(47351218, +), CAediting_177956(47351235, +), CAediting_177957(47351254, +), CAediting_177958(47351259, +), CAediting_177959(47351260, +), CAediting_177960(47351271, +), CAediting_177961(47351284, +), CAediting_177962(47351288, +), CAediting_177963(47351289, +), CAediting_177964(47351293, +), CAediting_177965(47351314, +), CAediting_177966(47352170, +), CAediting_177967(47352187, +), CAediting_177968(47352196, +), CAediting_177969(47352197, +), CAediting_177970(47353773, +), CAediting_177971(47355481, +), CAediting_177972(47358708, +), CAediting_177973(47359141, +), CAediting_177974(47359971, +), CAediting_177975(47359977, +), CAediting_177976(47360046, +), CAediting_177977(47360156, +), CAediting_177978(47361983, +), CAediting_177979(47365710, +), CAediting_177980(47366106, +), CAediting_177981(47366194, +), CAediting_177982(47366236, +), CAediting_177983(47366400, +), CAediting_177984(47366468, +), CAediting_177985(47367518, +), CAediting_177986(47370418, +), CAediting_177987(47370443, +), CAediting_177988(47370784, +), CAediting_177989(47370845, +), CAediting_177990(47370897, +), CAediting_177991(47370975, +), CAediting_177992(47372512, +), CAediting_177993(47372519, +), CAediting_177994(47372596, +), CAediting_177995(47372625, +), CAediting_177996(47372651, +), CAediting_177997(47372661, +), CAediting_177998(47372729, +), CAediting_177999(47372928, +), CAediting_178000(47372950, +), CAediting_178001(47372951, +), CAediting_178002(47372996, +), CAediting_178003(47373004, +), CAediting_178004(47373006, +), CAediting_178005(47373007, +), CAediting_178006(47373010, +), CAediting_178007(47373029, +), CAediting_178008(47373030, +), CAediting_178009(47373055, +), CAediting_178010(47373058, +), CAediting_178011(47373062, +), CAediting_178012(47373084, +), CAediting_178013(47373094, +), CAediting_178014(47373149, +), CAediting_178015(47373151, +), CAediting_178016(47373154, +), CAediting_178017(47374911, +), CAediting_178018(47375775, +), CAediting_178019(47375806, +), CAediting_178020(47375831, +), CAediting_178021(47375835, +), CAediting_178022(47375880, +), CAediting_178023(47375886, +), CAediting_178024(47375892, +), CAediting_178025(47375903, +), CAediting_178026(47375908, +), CAediting_178027(47375936, +), CAediting_178028(47375943, +), CAediting_178029(47375965, +), CAediting_178030(47375978, +), CAediting_178031(47376321, +), CAediting_178032(47376356, +), CAediting_178033(47376357, +), CAediting_178034(47376383, +), CAediting_178035(47376386, +), CAediting_178036(47376512, +), CAediting_178037(47376552, +), CAediting_178038(47377255, +), CAediting_178039(47377256, +), CAediting_178040(47377260, +), CAediting_178041(47377330, +), CAediting_178042(47377336, +), CAediting_178043(47377341, +), CAediting_178044(47377347, +), CAediting_178045(47377354, +), CAediting_178046(47377366, +), CAediting_178047(47377382, +), CAediting_178048(47377398, +), CAediting_178049(47377411, +), CAediting_178050(47377417, +), CAediting_178051(47377489, +), CAediting_178052(47377498, +), CAediting_178053(47377499, +), CAediting_178054(47377511, +), CAediting_178055(47377683, +), CAediting_178056(47377684, +), CAediting_178057(47377750, +), CAediting_178058(47377758, +), CAediting_178059(47377959, +), CAediting_178060(47377977, +), CAediting_178061(47377978, +), CAediting_178062(47377983, +), CAediting_178063(47377986, +), CAediting_178064(47378004, +), CAediting_178065(47378013, +), CAediting_178066(47378015, +), CAediting_178067(47378016, +), CAediting_178068(47378018, +), CAediting_178069(47378045, +), CAediting_178070(47378047, +), CAediting_178071(47378049, +), CAediting_178072(47378054, +), CAediting_178073(47378055, +), CAediting_178074(47378069, +), CAediting_178075(47378070, +), CAediting_178076(47378080, +), CAediting_178077(47378081, +), CAediting_178078(47378082, +), CAediting_178079(47378084, +), CAediting_178080(47378110, +), CAediting_178081(47378134, +), CAediting_178082(47378138, +), CAediting_178083(47378141, +), CAediting_178084(47378152, +), CAediting_178085(47378153, +), CAediting_178086(47378173, +), CAediting_178087(47378177, +), CAediting_178088(47378182, +), CAediting_178089(47378184, +), CAediting_178090(47378366, +), CAediting_178091(47378379, +), CAediting_178092(47378395, +), CAediting_178093(47378401, +), CAediting_178094(47378402, +), CAediting_178095(47378419, +), CAediting_178096(47378441, +), CAediting_178097(47378482, +), CAediting_178098(47378485, +), CAediting_178099(47378549, +), CAediting_178100(47378554, +), CAediting_178101(47378562, +), CAediting_178102(47378563, +), CAediting_178103(47378564, +), CAediting_178104(47378576, +), CAediting_178105(47378585, +), CAediting_178106(47380054, +), CAediting_178107(47380061, +), CAediting_178108(47380067, +), CAediting_178109(47380083, +), CAediting_178110(47380087, +), CAediting_178111(47380106, +), CAediting_178112(47380115, +), CAediting_178113(47380117, +), CAediting_178114(47380140, +), CAediting_178115(47380154, +), CAediting_178116(47380155, +), CAediting_178117(47380157, +), CAediting_178118(47380158, +), CAediting_178119(47380165, +), CAediting_178120(47380169, +), CAediting_178121(47380175, +), CAediting_178122(47380180, +), CAediting_178123(47380189, +), CAediting_178124(47380209, +), CAediting_178125(47380232, +), CAediting_178126(47380242, +), CAediting_178127(47380250, +), CAediting_178128(47380252, +), CAediting_178129(47380266, +), CAediting_178130(47380274, +), CAediting_178131(47380277, +), CAediting_178132(47380301, +), CAediting_178133(47380811, +), CAediting_178134(47380833, +), CAediting_178135(47380834, +), CAediting_178136(47380850, +), CAediting_178137(47380874, +), CAediting_178138(47380879, +), CAediting_178139(47380903, +), CAediting_178140(47380937, +), CAediting_178141(47380944, +), CAediting_178142(47380988, +), CAediting_178143(47380992, +), CAediting_178144(47381000, +), CAediting_178145(47381006, +), CAediting_178146(47381007, +), CAediting_178147(47381015, +), CAediting_178148(47381035, +), CAediting_178149(47381041, +), CAediting_178150(47381133, +), CAediting_178151(47381226, +), CAediting_178152(47381232, +), CAediting_178153(47381244, +), CAediting_178154(47381246, +), CAediting_178155(47381249, +), CAediting_178156(47381257, +), CAediting_178157(47381275, +), CAediting_178158(47381276, +), CAediting_178159(47381281, +), CAediting_178160(47381285, +), CAediting_178161(47381289, +), CAediting_178162(47381302, +), CAediting_178163(47381305, +), CAediting_178164(47381307, +), CAediting_178165(47381308, +), CAediting_178166(47381311, +), CAediting_178167(47381317, +), CAediting_178168(47381347, +), CAediting_178169(47381371, +), CAediting_178170(47381786, +), CAediting_178171(47381788, +), CAediting_178172(47381806, +), CAediting_178173(47381817, +), CAediting_178174(47381825, +), CAediting_178175(47381836, +), CAediting_178176(47381846, +), CAediting_178177(47381866, +), CAediting_178178(47381870, +), CAediting_178179(47381892, +), CAediting_178180(47381900, +), CAediting_178181(47381924, +), CAediting_178182(47381933, +), CAediting_178183(47381950, +), CAediting_178184(47381996, +), CAediting_178185(47382002, +), CAediting_178186(47382030, +), CAediting_178187(47382042, +), CAediting_178188(47382048, +), CAediting_178189(47382409, +), CAediting_178190(47382431, +), CAediting_178191(47382432, +), CAediting_178192(47382437, +), CAediting_178193(47382448, +), CAediting_178194(47382462, +), CAediting_178195(47382467, +), CAediting_178196(47382472, +), CAediting_178197(47382497, +), CAediting_178198(47382501, +), CAediting_178199(47382503, +), CAediting_178200(47382510, +), CAediting_178201(47382511, +), CAediting_178202(47382522, +), CAediting_178203(47382525, +), CAediting_178204(47382528, +), CAediting_178205(47382531, +), CAediting_178206(47382535, +), CAediting_178207(47382536, +), CAediting_178208(47382543, +), CAediting_178209(47382579, +), CAediting_178210(47382601, +), CAediting_178211(47382606, +), CAediting_178212(47382607, +), CAediting_178213(47382611, +), CAediting_178214(47382641, +), CAediting_178215(47382646, +), CAediting_178216(47383051, +), CAediting_178217(47383073, +), CAediting_178218(47383078, +), CAediting_178219(47383087, +), CAediting_178220(47383191, +), CAediting_178221(47383234, +), CAediting_178222(47383378, +), CAediting_178223(47383403, +), CAediting_178224(47383433, +), CAediting_178225(47383443, +), CAediting_178226(47383452, +), CAediting_178227(47383469, +), CAediting_178228(47383470, +), CAediting_178229(47383478, +), CAediting_178230(47383488, +), CAediting_178231(47383527, +), CAediting_178232(47383774, +), CAediting_178233(47383837, +), CAediting_178234(47383852, +), CAediting_178235(47384125, +), CAediting_178236(47384127, +), CAediting_178237(47384157, +), CAediting_178238(47384203, +), CAediting_178239(47384204, +), CAediting_178240(47384269, +), CAediting_178241(47384301, +), CAediting_178242(47384313, +), CAediting_178243(47384338, +), CAediting_178244(47384343, +), CAediting_178245(47384372, +), CAediting_178246(47384373, +), CAediting_178247(47384378, +), CAediting_178248(47384410, +), CAediting_178249(47384431, +), CAediting_178250(47384445, +), CAediting_178251(47384478, +), CAediting_178252(47384539, +), CAediting_178253(47384543, +), CAediting_178254(47384555, +), CAediting_178255(47384580, +), CAediting_178256(47384596, +), CAediting_178257(47384599, +), CAediting_178258(47384652, +), CAediting_178259(47384730, +), CAediting_178260(47384777, +), CAediting_178261(47384810, +), CAediting_178262(47384811, +), CAediting_178263(47384824, +), CAediting_178264(47384836, +), CAediting_178265(47384846, +), CAediting_178266(47384848, +), CAediting_178267(47384864, +), CAediting_178268(47384881, +), CAediting_178269(47384890, +), CAediting_178270(47384904, +), CAediting_178271(47384927, +), CAediting_178272(47384941, +), CAediting_178273(47384969, +), CAediting_178274(47387262, +), CAediting_178275(47387274, +), CAediting_178276(47387301, +), CAediting_178277(47387320, +),

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RNA editing positional annotations for EPCAM using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_177950	chr2_47350526_+	intronic
CAediting_177951	chr2_47350879_+	intronic
CAediting_177952	chr2_47350919_+	intronic
CAediting_177953	chr2_47350923_+	intronic
CAediting_177954	chr2_47351203_+	intronic
CAediting_177955	chr2_47351218_+	intronic
CAediting_177956	chr2_47351235_+	intronic
CAediting_177957	chr2_47351254_+	intronic
CAediting_177958	chr2_47351259_+	intronic
CAediting_177959	chr2_47351260_+	intronic
CAediting_177960	chr2_47351271_+	intronic
CAediting_177961	chr2_47351284_+	intronic
CAediting_177962	chr2_47351288_+	intronic
CAediting_177963	chr2_47351289_+	intronic
CAediting_177964	chr2_47351293_+	intronic
CAediting_177965	chr2_47351314_+	intronic
CAediting_177966	chr2_47352170_+	intronic
CAediting_177967	chr2_47352187_+	intronic
CAediting_177968	chr2_47352196_+	intronic
CAediting_177969	chr2_47352197_+	intronic
CAediting_177970	chr2_47353773_+	intronic
CAediting_177971	chr2_47355481_+	intronic
CAediting_177972	chr2_47358708_+	intronic
CAediting_177973	chr2_47359141_+	intronic
CAediting_177974	chr2_47359971_+	intronic
CAediting_177975	chr2_47359977_+	intronic
CAediting_177976	chr2_47360046_+	intronic
CAediting_177977	chr2_47360156_+	intronic
CAediting_177978	chr2_47361983_+	intronic
CAediting_177979	chr2_47365710_+	intronic
CAediting_177980	chr2_47366106_+	intronic
CAediting_177981	chr2_47366194_+	intronic
CAediting_177982	chr2_47366236_+	intronic
CAediting_177983	chr2_47366400_+	intronic
CAediting_177984	chr2_47366468_+	intronic
CAediting_177985	chr2_47367518_+	intronic
CAediting_177986	chr2_47370418_+	ncRNA_intronic
CAediting_177987	chr2_47370443_+	ncRNA_intronic
CAediting_177988	chr2_47370784_+	ncRNA_intronic
CAediting_177989	chr2_47370845_+	ncRNA_intronic
CAediting_177990	chr2_47370897_+	ncRNA_intronic
CAediting_177991	chr2_47370975_+	ncRNA_intronic
CAediting_177992	chr2_47372512_+	ncRNA_intronic
CAediting_177993	chr2_47372519_+	ncRNA_intronic
CAediting_177994	chr2_47372596_+	ncRNA_intronic
CAediting_177995	chr2_47372625_+	ncRNA_intronic
CAediting_177996	chr2_47372651_+	ncRNA_intronic
CAediting_177997	chr2_47372661_+	ncRNA_intronic
CAediting_177998	chr2_47372729_+	ncRNA_intronic
CAediting_177999	chr2_47372928_+	ncRNA_intronic
CAediting_178000	chr2_47372950_+	ncRNA_intronic
CAediting_178001	chr2_47372951_+	ncRNA_intronic
CAediting_178002	chr2_47372996_+	ncRNA_intronic
CAediting_178003	chr2_47373004_+	ncRNA_intronic
CAediting_178004	chr2_47373006_+	ncRNA_intronic
CAediting_178005	chr2_47373007_+	ncRNA_intronic
CAediting_178006	chr2_47373010_+	ncRNA_intronic
CAediting_178007	chr2_47373029_+	ncRNA_intronic
CAediting_178008	chr2_47373030_+	ncRNA_intronic
CAediting_178009	chr2_47373055_+	ncRNA_intronic
CAediting_178010	chr2_47373058_+	ncRNA_intronic
CAediting_178011	chr2_47373062_+	ncRNA_intronic
CAediting_178012	chr2_47373084_+	ncRNA_intronic
CAediting_178013	chr2_47373094_+	ncRNA_intronic
CAediting_178014	chr2_47373149_+	ncRNA_intronic
CAediting_178015	chr2_47373151_+	ncRNA_intronic
CAediting_178016	chr2_47373154_+	ncRNA_intronic
CAediting_178017	chr2_47374911_+	ncRNA_intronic
CAediting_178018	chr2_47375775_+	ncRNA_intronic
CAediting_178019	chr2_47375806_+	ncRNA_intronic
CAediting_178020	chr2_47375831_+	ncRNA_intronic
CAediting_178021	chr2_47375835_+	ncRNA_intronic
CAediting_178022	chr2_47375880_+	ncRNA_intronic
CAediting_178023	chr2_47375886_+	ncRNA_intronic
CAediting_178024	chr2_47375892_+	ncRNA_intronic
CAediting_178025	chr2_47375903_+	ncRNA_intronic
CAediting_178026	chr2_47375908_+	ncRNA_intronic
CAediting_178027	chr2_47375936_+	ncRNA_intronic
CAediting_178028	chr2_47375943_+	ncRNA_intronic
CAediting_178029	chr2_47375965_+	ncRNA_intronic
CAediting_178030	chr2_47375978_+	ncRNA_intronic
CAediting_178031	chr2_47376321_+	ncRNA_intronic
CAediting_178032	chr2_47376356_+	ncRNA_intronic
CAediting_178033	chr2_47376357_+	ncRNA_intronic
CAediting_178034	chr2_47376383_+	ncRNA_intronic
CAediting_178035	chr2_47376386_+	ncRNA_intronic
CAediting_178036	chr2_47376512_+	ncRNA_intronic
CAediting_178037	chr2_47376552_+	ncRNA_intronic
CAediting_178038	chr2_47377255_+	ncRNA_intronic
CAediting_178039	chr2_47377256_+	ncRNA_intronic
CAediting_178040	chr2_47377260_+	ncRNA_intronic
CAediting_178041	chr2_47377330_+	ncRNA_intronic
CAediting_178042	chr2_47377336_+	ncRNA_intronic
CAediting_178043	chr2_47377341_+	ncRNA_intronic
CAediting_178044	chr2_47377347_+	ncRNA_intronic
CAediting_178045	chr2_47377354_+	ncRNA_intronic
CAediting_178046	chr2_47377366_+	ncRNA_intronic
CAediting_178047	chr2_47377382_+	ncRNA_intronic
CAediting_178048	chr2_47377398_+	ncRNA_intronic
CAediting_178049	chr2_47377411_+	ncRNA_intronic
CAediting_178050	chr2_47377417_+	ncRNA_intronic
CAediting_178051	chr2_47377489_+	ncRNA_intronic
CAediting_178052	chr2_47377498_+	ncRNA_intronic
CAediting_178053	chr2_47377499_+	ncRNA_intronic
CAediting_178054	chr2_47377511_+	ncRNA_intronic
CAediting_178055	chr2_47377683_+	ncRNA_exonic
CAediting_178056	chr2_47377684_+	ncRNA_exonic
CAediting_178057	chr2_47377750_+	ncRNA_exonic
CAediting_178058	chr2_47377758_+	ncRNA_exonic
CAediting_178059	chr2_47377959_+	ncRNA_intronic
CAediting_178060	chr2_47377977_+	ncRNA_intronic
CAediting_178061	chr2_47377978_+	ncRNA_intronic
CAediting_178062	chr2_47377983_+	ncRNA_intronic
CAediting_178063	chr2_47377986_+	ncRNA_intronic
CAediting_178064	chr2_47378004_+	ncRNA_intronic
CAediting_178065	chr2_47378013_+	ncRNA_intronic
CAediting_178066	chr2_47378015_+	ncRNA_intronic
CAediting_178067	chr2_47378016_+	ncRNA_intronic
CAediting_178068	chr2_47378018_+	ncRNA_intronic
CAediting_178069	chr2_47378045_+	ncRNA_intronic
CAediting_178070	chr2_47378047_+	ncRNA_intronic
CAediting_178071	chr2_47378049_+	ncRNA_intronic
CAediting_178072	chr2_47378054_+	ncRNA_intronic
CAediting_178073	chr2_47378055_+	ncRNA_intronic
CAediting_178074	chr2_47378069_+	ncRNA_intronic
CAediting_178075	chr2_47378070_+	ncRNA_intronic
CAediting_178076	chr2_47378080_+	ncRNA_intronic
CAediting_178077	chr2_47378081_+	ncRNA_intronic
CAediting_178078	chr2_47378082_+	ncRNA_intronic
CAediting_178079	chr2_47378084_+	ncRNA_intronic
CAediting_178080	chr2_47378110_+	ncRNA_intronic
CAediting_178081	chr2_47378134_+	ncRNA_intronic
CAediting_178082	chr2_47378138_+	ncRNA_intronic
CAediting_178083	chr2_47378141_+	ncRNA_intronic
CAediting_178084	chr2_47378152_+	ncRNA_intronic
CAediting_178085	chr2_47378153_+	ncRNA_intronic
CAediting_178086	chr2_47378173_+	ncRNA_intronic
CAediting_178087	chr2_47378177_+	ncRNA_intronic
CAediting_178088	chr2_47378182_+	ncRNA_intronic
CAediting_178089	chr2_47378184_+	ncRNA_intronic
CAediting_178090	chr2_47378366_+	ncRNA_intronic
CAediting_178091	chr2_47378379_+	ncRNA_intronic
CAediting_178092	chr2_47378395_+	ncRNA_intronic
CAediting_178093	chr2_47378401_+	ncRNA_intronic
CAediting_178094	chr2_47378402_+	ncRNA_intronic
CAediting_178095	chr2_47378419_+	ncRNA_intronic
CAediting_178096	chr2_47378441_+	ncRNA_intronic
CAediting_178097	chr2_47378482_+	ncRNA_intronic
CAediting_178098	chr2_47378485_+	ncRNA_intronic
CAediting_178099	chr2_47378549_+	ncRNA_intronic
CAediting_178100	chr2_47378554_+	ncRNA_intronic
CAediting_178101	chr2_47378562_+	ncRNA_intronic
CAediting_178102	chr2_47378563_+	ncRNA_intronic
CAediting_178103	chr2_47378564_+	ncRNA_intronic
CAediting_178104	chr2_47378576_+	ncRNA_intronic
CAediting_178105	chr2_47378585_+	ncRNA_intronic
CAediting_178106	chr2_47380054_+	ncRNA_intronic
CAediting_178107	chr2_47380061_+	ncRNA_intronic
CAediting_178108	chr2_47380067_+	ncRNA_intronic
CAediting_178109	chr2_47380083_+	ncRNA_intronic
CAediting_178110	chr2_47380087_+	ncRNA_intronic
CAediting_178111	chr2_47380106_+	ncRNA_intronic
CAediting_178112	chr2_47380115_+	ncRNA_intronic
CAediting_178113	chr2_47380117_+	ncRNA_intronic
CAediting_178114	chr2_47380140_+	ncRNA_intronic
CAediting_178115	chr2_47380154_+	ncRNA_intronic
CAediting_178116	chr2_47380155_+	ncRNA_intronic
CAediting_178117	chr2_47380157_+	ncRNA_intronic
CAediting_178118	chr2_47380158_+	ncRNA_intronic
CAediting_178119	chr2_47380165_+	ncRNA_intronic
CAediting_178120	chr2_47380169_+	ncRNA_intronic
CAediting_178121	chr2_47380175_+	ncRNA_intronic
CAediting_178122	chr2_47380180_+	ncRNA_intronic
CAediting_178123	chr2_47380189_+	ncRNA_intronic
CAediting_178124	chr2_47380209_+	ncRNA_intronic
CAediting_178125	chr2_47380232_+	ncRNA_intronic
CAediting_178126	chr2_47380242_+	ncRNA_intronic
CAediting_178127	chr2_47380250_+	ncRNA_intronic
CAediting_178128	chr2_47380252_+	ncRNA_intronic
CAediting_178129	chr2_47380266_+	ncRNA_intronic
CAediting_178130	chr2_47380274_+	ncRNA_intronic
CAediting_178131	chr2_47380277_+	ncRNA_intronic
CAediting_178132	chr2_47380301_+	ncRNA_intronic
CAediting_178133	chr2_47380811_+	ncRNA_intronic
CAediting_178134	chr2_47380833_+	ncRNA_intronic
CAediting_178135	chr2_47380834_+	ncRNA_intronic
CAediting_178136	chr2_47380850_+	ncRNA_intronic
CAediting_178137	chr2_47380874_+	ncRNA_intronic
CAediting_178138	chr2_47380879_+	ncRNA_intronic
CAediting_178139	chr2_47380903_+	ncRNA_intronic
CAediting_178140	chr2_47380937_+	ncRNA_intronic
CAediting_178141	chr2_47380944_+	ncRNA_intronic
CAediting_178142	chr2_47380988_+	ncRNA_intronic
CAediting_178143	chr2_47380992_+	ncRNA_intronic
CAediting_178144	chr2_47381000_+	ncRNA_intronic
CAediting_178145	chr2_47381006_+	ncRNA_intronic
CAediting_178146	chr2_47381007_+	ncRNA_intronic
CAediting_178147	chr2_47381015_+	ncRNA_intronic
CAediting_178148	chr2_47381035_+	ncRNA_intronic
CAediting_178149	chr2_47381041_+	ncRNA_intronic
CAediting_178150	chr2_47381133_+	ncRNA_intronic
CAediting_178151	chr2_47381226_+	ncRNA_intronic
CAediting_178152	chr2_47381232_+	ncRNA_intronic
CAediting_178153	chr2_47381244_+	ncRNA_intronic
CAediting_178154	chr2_47381246_+	ncRNA_intronic
CAediting_178155	chr2_47381249_+	ncRNA_intronic
CAediting_178156	chr2_47381257_+	ncRNA_intronic
CAediting_178157	chr2_47381275_+	ncRNA_intronic
CAediting_178158	chr2_47381276_+	ncRNA_intronic
CAediting_178159	chr2_47381281_+	ncRNA_intronic
CAediting_178160	chr2_47381285_+	ncRNA_intronic
CAediting_178161	chr2_47381289_+	ncRNA_intronic
CAediting_178162	chr2_47381302_+	ncRNA_intronic
CAediting_178163	chr2_47381305_+	ncRNA_intronic
CAediting_178164	chr2_47381307_+	ncRNA_intronic
CAediting_178165	chr2_47381308_+	ncRNA_intronic
CAediting_178166	chr2_47381311_+	ncRNA_intronic
CAediting_178167	chr2_47381317_+	ncRNA_intronic
CAediting_178168	chr2_47381347_+	ncRNA_intronic
CAediting_178169	chr2_47381371_+	ncRNA_intronic
CAediting_178170	chr2_47381786_+	ncRNA_intronic
CAediting_178171	chr2_47381788_+	ncRNA_intronic
CAediting_178172	chr2_47381806_+	ncRNA_intronic
CAediting_178173	chr2_47381817_+	ncRNA_intronic
CAediting_178174	chr2_47381825_+	ncRNA_intronic
CAediting_178175	chr2_47381836_+	ncRNA_intronic
CAediting_178176	chr2_47381846_+	ncRNA_intronic
CAediting_178177	chr2_47381866_+	ncRNA_intronic
CAediting_178178	chr2_47381870_+	ncRNA_intronic
CAediting_178179	chr2_47381892_+	ncRNA_intronic
CAediting_178180	chr2_47381900_+	ncRNA_intronic
CAediting_178181	chr2_47381924_+	ncRNA_intronic
CAediting_178182	chr2_47381933_+	ncRNA_intronic
CAediting_178183	chr2_47381950_+	ncRNA_intronic
CAediting_178184	chr2_47381996_+	ncRNA_intronic
CAediting_178185	chr2_47382002_+	ncRNA_intronic
CAediting_178186	chr2_47382030_+	ncRNA_intronic
CAediting_178187	chr2_47382042_+	ncRNA_intronic
CAediting_178188	chr2_47382048_+	ncRNA_intronic
CAediting_178189	chr2_47382409_+	ncRNA_intronic
CAediting_178190	chr2_47382431_+	ncRNA_intronic
CAediting_178191	chr2_47382432_+	ncRNA_intronic
CAediting_178192	chr2_47382437_+	ncRNA_intronic
CAediting_178193	chr2_47382448_+	ncRNA_intronic
CAediting_178194	chr2_47382462_+	ncRNA_intronic
CAediting_178195	chr2_47382467_+	ncRNA_intronic
CAediting_178196	chr2_47382472_+	ncRNA_intronic
CAediting_178197	chr2_47382497_+	ncRNA_intronic
CAediting_178198	chr2_47382501_+	ncRNA_intronic
CAediting_178199	chr2_47382503_+	ncRNA_intronic
CAediting_178200	chr2_47382510_+	ncRNA_intronic
CAediting_178201	chr2_47382511_+	ncRNA_intronic
CAediting_178202	chr2_47382522_+	ncRNA_intronic
CAediting_178203	chr2_47382525_+	ncRNA_intronic
CAediting_178204	chr2_47382528_+	ncRNA_intronic
CAediting_178205	chr2_47382531_+	ncRNA_intronic
CAediting_178206	chr2_47382535_+	ncRNA_intronic
CAediting_178207	chr2_47382536_+	ncRNA_intronic
CAediting_178208	chr2_47382543_+	ncRNA_intronic
CAediting_178209	chr2_47382579_+	ncRNA_intronic
CAediting_178210	chr2_47382601_+	ncRNA_intronic
CAediting_178211	chr2_47382606_+	ncRNA_intronic
CAediting_178212	chr2_47382607_+	ncRNA_intronic
CAediting_178213	chr2_47382611_+	ncRNA_intronic
CAediting_178214	chr2_47382641_+	ncRNA_intronic
CAediting_178215	chr2_47382646_+	ncRNA_intronic
CAediting_178216	chr2_47383051_+	ncRNA_intronic
CAediting_178217	chr2_47383073_+	ncRNA_intronic
CAediting_178218	chr2_47383078_+	ncRNA_intronic
CAediting_178219	chr2_47383087_+	ncRNA_intronic
CAediting_178220	chr2_47383191_+	ncRNA_exonic
CAediting_178221	chr2_47383234_+	ncRNA_exonic
CAediting_178222	chr2_47383378_+	ncRNA_exonic
CAediting_178223	chr2_47383403_+	ncRNA_exonic
CAediting_178224	chr2_47383433_+	ncRNA_intronic
CAediting_178225	chr2_47383443_+	ncRNA_intronic
CAediting_178226	chr2_47383452_+	ncRNA_intronic
CAediting_178227	chr2_47383469_+	ncRNA_intronic
CAediting_178228	chr2_47383470_+	ncRNA_intronic
CAediting_178229	chr2_47383478_+	ncRNA_intronic
CAediting_178230	chr2_47383488_+	ncRNA_intronic
CAediting_178231	chr2_47383527_+	ncRNA_intronic
CAediting_178232	chr2_47383774_+	ncRNA_intronic
CAediting_178233	chr2_47383837_+	ncRNA_intronic
CAediting_178234	chr2_47383852_+	ncRNA_intronic
CAediting_178235	chr2_47384125_+	ncRNA_intronic
CAediting_178236	chr2_47384127_+	ncRNA_intronic
CAediting_178237	chr2_47384157_+	ncRNA_intronic
CAediting_178238	chr2_47384203_+	ncRNA_intronic
CAediting_178239	chr2_47384204_+	ncRNA_intronic
CAediting_178240	chr2_47384269_+	ncRNA_intronic
CAediting_178241	chr2_47384301_+	ncRNA_intronic
CAediting_178242	chr2_47384313_+	ncRNA_intronic
CAediting_178243	chr2_47384338_+	ncRNA_intronic
CAediting_178244	chr2_47384343_+	ncRNA_intronic
CAediting_178245	chr2_47384372_+	ncRNA_intronic
CAediting_178246	chr2_47384373_+	ncRNA_intronic
CAediting_178247	chr2_47384378_+	ncRNA_intronic
CAediting_178248	chr2_47384410_+	ncRNA_intronic
CAediting_178249	chr2_47384431_+	ncRNA_intronic
CAediting_178250	chr2_47384445_+	ncRNA_intronic
CAediting_178251	chr2_47384478_+	ncRNA_intronic
CAediting_178252	chr2_47384539_+	ncRNA_intronic
CAediting_178253	chr2_47384543_+	ncRNA_intronic
CAediting_178254	chr2_47384555_+	ncRNA_intronic
CAediting_178255	chr2_47384580_+	ncRNA_intronic
CAediting_178256	chr2_47384596_+	ncRNA_intronic
CAediting_178257	chr2_47384599_+	ncRNA_intronic
CAediting_178258	chr2_47384652_+	ncRNA_intronic
CAediting_178259	chr2_47384730_+	ncRNA_intronic
CAediting_178260	chr2_47384777_+	ncRNA_intronic
CAediting_178261	chr2_47384810_+	ncRNA_intronic
CAediting_178262	chr2_47384811_+	ncRNA_intronic
CAediting_178263	chr2_47384824_+	ncRNA_intronic
CAediting_178264	chr2_47384836_+	ncRNA_intronic
CAediting_178265	chr2_47384846_+	ncRNA_intronic
CAediting_178266	chr2_47384848_+	ncRNA_intronic
CAediting_178267	chr2_47384864_+	ncRNA_intronic
CAediting_178268	chr2_47384881_+	ncRNA_intronic
CAediting_178269	chr2_47384890_+	ncRNA_intronic
CAediting_178270	chr2_47384904_+	ncRNA_intronic
CAediting_178271	chr2_47384927_+	ncRNA_intronic
CAediting_178272	chr2_47384941_+	ncRNA_intronic
CAediting_178273	chr2_47384969_+	ncRNA_intronic
CAediting_178274	chr2_47387262_+	intronic
CAediting_178275	chr2_47387274_+	intronic
CAediting_178276	chr2_47387301_+	intronic
CAediting_178277	chr2_47387320_+	intronic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_177950	chr2_47350526_+	SINE	Alu	AluJb
CAediting_177951	chr2_47350879_+	SINE	Alu	AluY
CAediting_177952	chr2_47350919_+	SINE	Alu	AluY
CAediting_177953	chr2_47350923_+	SINE	Alu	AluY
CAediting_177954	chr2_47351203_+	SINE	Alu	AluSz6
CAediting_177955	chr2_47351218_+	SINE	Alu	AluSz6
CAediting_177956	chr2_47351235_+	SINE	Alu	AluSz6
CAediting_177957	chr2_47351254_+	SINE	Alu	AluSz6
CAediting_177958	chr2_47351259_+	SINE	Alu	AluSz6
CAediting_177959	chr2_47351260_+	SINE	Alu	AluSz6
CAediting_177960	chr2_47351271_+	SINE	Alu	AluSz6
CAediting_177961	chr2_47351284_+	SINE	Alu	AluSz6
CAediting_177962	chr2_47351288_+	SINE	Alu	AluSz6
CAediting_177963	chr2_47351289_+	SINE	Alu	AluSz6
CAediting_177964	chr2_47351293_+	SINE	Alu	AluSz6
CAediting_177965	chr2_47351314_+	SINE	Alu	AluSz6
CAediting_177966	chr2_47352170_+	SINE	Alu	AluJb
CAediting_177967	chr2_47352187_+	SINE	Alu	AluJb
CAediting_177968	chr2_47352196_+	SINE	Alu	AluJb
CAediting_177969	chr2_47352197_+	SINE	Alu	AluJb
CAediting_177970	chr2_47353773_+	SINE	Alu	AluSz6
CAediting_177971	chr2_47355481_+	SINE	Alu	AluJb
CAediting_177972	chr2_47358708_+	SINE	Alu	AluSg
CAediting_177973	chr2_47359141_+	SINE	Alu	AluYj4
CAediting_177974	chr2_47359971_+	SINE	Alu	AluSz
CAediting_177975	chr2_47359977_+	SINE	Alu	AluSz
CAediting_177976	chr2_47360046_+	SINE	Alu	AluSz
CAediting_177977	chr2_47360156_+	SINE	Alu	AluSz
CAediting_177978	chr2_47361983_+	SINE	Alu	AluSx
CAediting_177979	chr2_47365710_+	SINE	Alu	AluSq2
CAediting_177980	chr2_47366106_+	SINE	Alu	AluSq2
CAediting_177981	chr2_47366194_+	SINE	Alu	AluSq2
CAediting_177982	chr2_47366236_+	SINE	Alu	AluSq2
CAediting_177983	chr2_47366400_+	SINE	Alu	AluSg
CAediting_177984	chr2_47366468_+	SINE	Alu	AluSg
CAediting_177985	chr2_47367518_+	SINE	Alu	AluSq2
CAediting_177986	chr2_47370418_+	SINE	Alu	AluSg
CAediting_177987	chr2_47370443_+	SINE	Alu	AluSg
CAediting_177988	chr2_47370784_+	SINE	Alu	AluSq2
CAediting_177989	chr2_47370845_+	SINE	Alu	AluSq2
CAediting_177990	chr2_47370897_+	SINE	Alu	AluSq2
CAediting_177991	chr2_47370975_+	SINE	Alu	AluSq2
CAediting_177992	chr2_47372512_+	SINE	Alu	AluSx4
CAediting_177993	chr2_47372519_+	SINE	Alu	AluSx4
CAediting_177994	chr2_47372596_+	SINE	Alu	AluSx4
CAediting_177995	chr2_47372625_+	SINE	Alu	AluSx4
CAediting_177996	chr2_47372651_+	SINE	Alu	AluSx4
CAediting_177997	chr2_47372661_+	SINE	Alu	AluSx4
CAediting_177998	chr2_47372729_+	SINE	Alu	AluSx4
CAediting_177999	chr2_47372928_+	SINE	Alu	AluJb
CAediting_178000	chr2_47372950_+	SINE	Alu	AluJb
CAediting_178001	chr2_47372951_+	SINE	Alu	AluJb
CAediting_178002	chr2_47372996_+	SINE	Alu	AluJb
CAediting_178003	chr2_47373004_+	SINE	Alu	AluJb
CAediting_178004	chr2_47373006_+	SINE	Alu	AluJb
CAediting_178005	chr2_47373007_+	SINE	Alu	AluJb
CAediting_178006	chr2_47373010_+	SINE	Alu	AluJb
CAediting_178007	chr2_47373029_+	SINE	Alu	AluJb
CAediting_178008	chr2_47373030_+	SINE	Alu	AluJb
CAediting_178009	chr2_47373055_+	SINE	Alu	AluJb
CAediting_178010	chr2_47373058_+	SINE	Alu	AluJb
CAediting_178011	chr2_47373062_+	SINE	Alu	AluJb
CAediting_178012	chr2_47373084_+	SINE	Alu	AluJb
CAediting_178013	chr2_47373094_+	SINE	Alu	AluJb
CAediting_178014	chr2_47373149_+	SINE	Alu	AluJb
CAediting_178015	chr2_47373151_+	SINE	Alu	AluJb
CAediting_178016	chr2_47373154_+	SINE	Alu	AluJb
CAediting_178017	chr2_47374911_+	SINE	Alu	AluSq
CAediting_178018	chr2_47375775_+	SINE	Alu	AluSx4
CAediting_178019	chr2_47375806_+	SINE	Alu	AluSx4
CAediting_178020	chr2_47375831_+	SINE	Alu	AluSx4
CAediting_178021	chr2_47375835_+	SINE	Alu	AluSx4
CAediting_178022	chr2_47375880_+	SINE	Alu	AluSx4
CAediting_178023	chr2_47375886_+	SINE	Alu	AluSx4
CAediting_178024	chr2_47375892_+	SINE	Alu	AluSx4
CAediting_178025	chr2_47375903_+	SINE	Alu	AluSx4
CAediting_178026	chr2_47375908_+	SINE	Alu	AluSx4
CAediting_178027	chr2_47375936_+	SINE	Alu	AluSx4
CAediting_178028	chr2_47375943_+	SINE	Alu	AluSx4
CAediting_178029	chr2_47375965_+	SINE	Alu	AluSx4
CAediting_178030	chr2_47375978_+	SINE	Alu	AluSx4
CAediting_178031	chr2_47376321_+	SINE	Alu	AluSp
CAediting_178032	chr2_47376356_+	SINE	Alu	AluSp
CAediting_178033	chr2_47376357_+	SINE	Alu	AluSp
CAediting_178034	chr2_47376383_+	SINE	Alu	AluSp
CAediting_178035	chr2_47376386_+	SINE	Alu	AluSp
CAediting_178036	chr2_47376512_+	SINE	Alu	AluSp
CAediting_178037	chr2_47376552_+	SINE	Alu	AluSp
CAediting_178038	chr2_47377255_+	SINE	Alu	AluSz6
CAediting_178039	chr2_47377256_+	SINE	Alu	AluSz6
CAediting_178040	chr2_47377260_+	SINE	Alu	AluSz6
CAediting_178041	chr2_47377330_+	SINE	Alu	AluSz6
CAediting_178042	chr2_47377336_+	SINE	Alu	AluSz6
CAediting_178043	chr2_47377341_+	SINE	Alu	AluSz6
CAediting_178044	chr2_47377347_+	SINE	Alu	AluSz6
CAediting_178045	chr2_47377354_+	SINE	Alu	AluSz6
CAediting_178046	chr2_47377366_+	SINE	Alu	AluSz6
CAediting_178047	chr2_47377382_+	SINE	Alu	AluSz6
CAediting_178048	chr2_47377398_+	SINE	Alu	AluSz6
CAediting_178049	chr2_47377411_+	SINE	Alu	AluSz6
CAediting_178050	chr2_47377417_+	SINE	Alu	AluSz6
CAediting_178051	chr2_47377489_+	SINE	Alu	AluSz6
CAediting_178052	chr2_47377498_+	SINE	Alu	AluSz6
CAediting_178053	chr2_47377499_+	SINE	Alu	AluSz6
CAediting_178054	chr2_47377511_+	SINE	Alu	AluSz6
CAediting_178059	chr2_47377959_+	SINE	Alu	AluY
CAediting_178060	chr2_47377977_+	SINE	Alu	AluY
CAediting_178061	chr2_47377978_+	SINE	Alu	AluY
CAediting_178062	chr2_47377983_+	SINE	Alu	AluY
CAediting_178063	chr2_47377986_+	SINE	Alu	AluY
CAediting_178064	chr2_47378004_+	SINE	Alu	AluY
CAediting_178065	chr2_47378013_+	SINE	Alu	AluY
CAediting_178066	chr2_47378015_+	SINE	Alu	AluY
CAediting_178067	chr2_47378016_+	SINE	Alu	AluY
CAediting_178068	chr2_47378018_+	SINE	Alu	AluY
CAediting_178069	chr2_47378045_+	SINE	Alu	AluY
CAediting_178070	chr2_47378047_+	SINE	Alu	AluY
CAediting_178071	chr2_47378049_+	SINE	Alu	AluY
CAediting_178072	chr2_47378054_+	SINE	Alu	AluY
CAediting_178073	chr2_47378055_+	SINE	Alu	AluY
CAediting_178074	chr2_47378069_+	SINE	Alu	AluY
CAediting_178075	chr2_47378070_+	SINE	Alu	AluY
CAediting_178076	chr2_47378080_+	SINE	Alu	AluY
CAediting_178077	chr2_47378081_+	SINE	Alu	AluY
CAediting_178078	chr2_47378082_+	SINE	Alu	AluY
CAediting_178079	chr2_47378084_+	SINE	Alu	AluY
CAediting_178080	chr2_47378110_+	SINE	Alu	AluY
CAediting_178081	chr2_47378134_+	SINE	Alu	AluY
CAediting_178082	chr2_47378138_+	SINE	Alu	AluY
CAediting_178083	chr2_47378141_+	SINE	Alu	AluY
CAediting_178084	chr2_47378152_+	SINE	Alu	AluY
CAediting_178085	chr2_47378153_+	SINE	Alu	AluY
CAediting_178086	chr2_47378173_+	SINE	Alu	AluY
CAediting_178087	chr2_47378177_+	SINE	Alu	AluY
CAediting_178088	chr2_47378182_+	SINE	Alu	AluY
CAediting_178089	chr2_47378184_+	SINE	Alu	AluY
CAediting_178090	chr2_47378366_+	SINE	Alu	AluSp
CAediting_178091	chr2_47378379_+	SINE	Alu	AluSp
CAediting_178092	chr2_47378395_+	SINE	Alu	AluSp
CAediting_178093	chr2_47378401_+	SINE	Alu	AluSp
CAediting_178094	chr2_47378402_+	SINE	Alu	AluSp
CAediting_178095	chr2_47378419_+	SINE	Alu	AluSp
CAediting_178096	chr2_47378441_+	SINE	Alu	AluSp
CAediting_178097	chr2_47378482_+	SINE	Alu	AluSp
CAediting_178098	chr2_47378485_+	SINE	Alu	AluSp
CAediting_178099	chr2_47378549_+	SINE	Alu	AluSp
CAediting_178100	chr2_47378554_+	SINE	Alu	AluSp
CAediting_178101	chr2_47378562_+	SINE	Alu	AluSp
CAediting_178102	chr2_47378563_+	SINE	Alu	AluSp
CAediting_178103	chr2_47378564_+	SINE	Alu	AluSp
CAediting_178104	chr2_47378576_+	SINE	Alu	AluSp
CAediting_178105	chr2_47378585_+	SINE	Alu	AluSp
CAediting_178106	chr2_47380054_+	SINE	Alu	AluJb
CAediting_178107	chr2_47380061_+	SINE	Alu	AluJb
CAediting_178108	chr2_47380067_+	SINE	Alu	AluJb
CAediting_178109	chr2_47380083_+	SINE	Alu	AluJb
CAediting_178110	chr2_47380087_+	SINE	Alu	AluJb
CAediting_178111	chr2_47380106_+	SINE	Alu	AluJb
CAediting_178112	chr2_47380115_+	SINE	Alu	AluJb
CAediting_178113	chr2_47380117_+	SINE	Alu	AluJb
CAediting_178114	chr2_47380140_+	SINE	Alu	AluJb
CAediting_178115	chr2_47380154_+	SINE	Alu	AluJb
CAediting_178116	chr2_47380155_+	SINE	Alu	AluJb
CAediting_178117	chr2_47380157_+	SINE	Alu	AluJb
CAediting_178118	chr2_47380158_+	SINE	Alu	AluJb
CAediting_178119	chr2_47380165_+	SINE	Alu	AluJb
CAediting_178120	chr2_47380169_+	SINE	Alu	AluJb
CAediting_178121	chr2_47380175_+	SINE	Alu	AluJb
CAediting_178122	chr2_47380180_+	SINE	Alu	AluJb
CAediting_178123	chr2_47380189_+	SINE	Alu	AluJb
CAediting_178124	chr2_47380209_+	SINE	Alu	AluJb
CAediting_178125	chr2_47380232_+	SINE	Alu	AluJb
CAediting_178126	chr2_47380242_+	SINE	Alu	AluJb
CAediting_178127	chr2_47380250_+	SINE	Alu	AluJb
CAediting_178128	chr2_47380252_+	SINE	Alu	AluJb
CAediting_178129	chr2_47380266_+	SINE	Alu	AluJb
CAediting_178130	chr2_47380274_+	SINE	Alu	AluJb
CAediting_178131	chr2_47380277_+	SINE	Alu	AluJb
CAediting_178132	chr2_47380301_+	SINE	Alu	AluJb
CAediting_178133	chr2_47380811_+	SINE	Alu	AluSz
CAediting_178134	chr2_47380833_+	SINE	Alu	AluSz
CAediting_178135	chr2_47380834_+	SINE	Alu	AluSz
CAediting_178136	chr2_47380850_+	SINE	Alu	AluSz
CAediting_178137	chr2_47380874_+	SINE	Alu	AluSz
CAediting_178138	chr2_47380879_+	SINE	Alu	AluSz
CAediting_178139	chr2_47380903_+	SINE	Alu	AluSz
CAediting_178140	chr2_47380937_+	SINE	Alu	AluSz
CAediting_178141	chr2_47380944_+	SINE	Alu	AluSz
CAediting_178142	chr2_47380988_+	SINE	Alu	AluSz
CAediting_178143	chr2_47380992_+	SINE	Alu	AluSz
CAediting_178144	chr2_47381000_+	SINE	Alu	AluSz
CAediting_178145	chr2_47381006_+	SINE	Alu	AluSz
CAediting_178146	chr2_47381007_+	SINE	Alu	AluSz
CAediting_178147	chr2_47381015_+	SINE	Alu	AluSz
CAediting_178148	chr2_47381035_+	SINE	Alu	AluSz
CAediting_178149	chr2_47381041_+	SINE	Alu	AluSz
CAediting_178150	chr2_47381133_+	SINE	Alu	AluSp
CAediting_178151	chr2_47381226_+	SINE	Alu	AluSp
CAediting_178152	chr2_47381232_+	SINE	Alu	AluSp
CAediting_178153	chr2_47381244_+	SINE	Alu	AluSp
CAediting_178154	chr2_47381246_+	SINE	Alu	AluSp
CAediting_178155	chr2_47381249_+	SINE	Alu	AluSp
CAediting_178156	chr2_47381257_+	SINE	Alu	AluSp
CAediting_178157	chr2_47381275_+	SINE	Alu	AluSp
CAediting_178158	chr2_47381276_+	SINE	Alu	AluSp
CAediting_178159	chr2_47381281_+	SINE	Alu	AluSp
CAediting_178160	chr2_47381285_+	SINE	Alu	AluSp
CAediting_178161	chr2_47381289_+	SINE	Alu	AluSp
CAediting_178162	chr2_47381302_+	SINE	Alu	AluSp
CAediting_178163	chr2_47381305_+	SINE	Alu	AluSp
CAediting_178164	chr2_47381307_+	SINE	Alu	AluSp
CAediting_178165	chr2_47381308_+	SINE	Alu	AluSp
CAediting_178166	chr2_47381311_+	SINE	Alu	AluSp
CAediting_178167	chr2_47381317_+	SINE	Alu	AluSp
CAediting_178168	chr2_47381347_+	SINE	Alu	AluSp
CAediting_178169	chr2_47381371_+	SINE	Alu	AluSp
CAediting_178170	chr2_47381786_+	SINE	Alu	AluJo
CAediting_178171	chr2_47381788_+	SINE	Alu	AluJo
CAediting_178172	chr2_47381806_+	SINE	Alu	AluJo
CAediting_178173	chr2_47381817_+	SINE	Alu	AluJo
CAediting_178174	chr2_47381825_+	SINE	Alu	AluJo
CAediting_178175	chr2_47381836_+	SINE	Alu	AluJo
CAediting_178176	chr2_47381846_+	SINE	Alu	AluJo
CAediting_178177	chr2_47381866_+	SINE	Alu	AluJo
CAediting_178178	chr2_47381870_+	SINE	Alu	AluJo
CAediting_178179	chr2_47381892_+	SINE	Alu	AluJo
CAediting_178180	chr2_47381900_+	SINE	Alu	AluJo
CAediting_178181	chr2_47381924_+	SINE	Alu	AluJo
CAediting_178182	chr2_47381933_+	SINE	Alu	AluJo
CAediting_178183	chr2_47381950_+	SINE	Alu	AluJo
CAediting_178184	chr2_47381996_+	SINE	Alu	AluJo
CAediting_178185	chr2_47382002_+	SINE	Alu	AluJo
CAediting_178186	chr2_47382030_+	SINE	Alu	AluJo
CAediting_178187	chr2_47382042_+	SINE	Alu	AluJo
CAediting_178188	chr2_47382048_+	SINE	Alu	AluJo
CAediting_178189	chr2_47382409_+	SINE	Alu	AluSp
CAediting_178190	chr2_47382431_+	SINE	Alu	AluSp
CAediting_178191	chr2_47382432_+	SINE	Alu	AluSp
CAediting_178192	chr2_47382437_+	SINE	Alu	AluSp
CAediting_178193	chr2_47382448_+	SINE	Alu	AluSp
CAediting_178194	chr2_47382462_+	SINE	Alu	AluSp
CAediting_178195	chr2_47382467_+	SINE	Alu	AluSp
CAediting_178196	chr2_47382472_+	SINE	Alu	AluSp
CAediting_178197	chr2_47382497_+	SINE	Alu	AluSp
CAediting_178198	chr2_47382501_+	SINE	Alu	AluSp
CAediting_178199	chr2_47382503_+	SINE	Alu	AluSp
CAediting_178200	chr2_47382510_+	SINE	Alu	AluSp
CAediting_178201	chr2_47382511_+	SINE	Alu	AluSp
CAediting_178202	chr2_47382522_+	SINE	Alu	AluSp
CAediting_178203	chr2_47382525_+	SINE	Alu	AluSp
CAediting_178204	chr2_47382528_+	SINE	Alu	AluSp
CAediting_178205	chr2_47382531_+	SINE	Alu	AluSp
CAediting_178206	chr2_47382535_+	SINE	Alu	AluSp
CAediting_178207	chr2_47382536_+	SINE	Alu	AluSp
CAediting_178208	chr2_47382543_+	SINE	Alu	AluSp
CAediting_178209	chr2_47382579_+	SINE	Alu	AluSp
CAediting_178210	chr2_47382601_+	SINE	Alu	AluSp
CAediting_178211	chr2_47382606_+	SINE	Alu	AluSp
CAediting_178212	chr2_47382607_+	SINE	Alu	AluSp
CAediting_178213	chr2_47382611_+	SINE	Alu	AluSp
CAediting_178214	chr2_47382641_+	SINE	Alu	AluSp
CAediting_178215	chr2_47382646_+	SINE	Alu	AluSp
CAediting_178216	chr2_47383051_+	SINE	Alu	AluY
CAediting_178217	chr2_47383073_+	SINE	Alu	AluY
CAediting_178218	chr2_47383078_+	SINE	Alu	AluY
CAediting_178219	chr2_47383087_+	SINE	Alu	AluY
CAediting_178220	chr2_47383191_+	SINE	Alu	AluY
CAediting_178221	chr2_47383234_+	SINE	Alu	AluY
CAediting_178222	chr2_47383378_+	SINE	Alu	AluSx4
CAediting_178223	chr2_47383403_+	SINE	Alu	AluSx4
CAediting_178224	chr2_47383433_+	SINE	Alu	AluSx4
CAediting_178225	chr2_47383443_+	SINE	Alu	AluSx4
CAediting_178226	chr2_47383452_+	SINE	Alu	AluSx4
CAediting_178227	chr2_47383469_+	SINE	Alu	AluSx4
CAediting_178228	chr2_47383470_+	SINE	Alu	AluSx4
CAediting_178229	chr2_47383478_+	SINE	Alu	AluSx4
CAediting_178230	chr2_47383488_+	SINE	Alu	AluSx4
CAediting_178231	chr2_47383527_+	SINE	Alu	AluSx4
CAediting_178232	chr2_47383774_+	SINE	Alu	AluSx
CAediting_178233	chr2_47383837_+	SINE	Alu	AluSx
CAediting_178234	chr2_47383852_+	SINE	Alu	AluSx
CAediting_178235	chr2_47384125_+	SINE	Alu	AluSx1
CAediting_178236	chr2_47384127_+	SINE	Alu	AluSx1
CAediting_178237	chr2_47384157_+	SINE	Alu	AluSx1
CAediting_178238	chr2_47384203_+	SINE	Alu	AluSx1
CAediting_178239	chr2_47384204_+	SINE	Alu	AluSx1
CAediting_178240	chr2_47384269_+	SINE	Alu	AluSx1
CAediting_178241	chr2_47384301_+	SINE	Alu	AluSx1
CAediting_178242	chr2_47384313_+	SINE	Alu	AluSx1
CAediting_178243	chr2_47384338_+	SINE	Alu	AluSx1
CAediting_178244	chr2_47384343_+	SINE	Alu	AluSx1
CAediting_178245	chr2_47384372_+	SINE	Alu	AluSx1
CAediting_178246	chr2_47384373_+	SINE	Alu	AluSx1
CAediting_178247	chr2_47384378_+	SINE	Alu	AluSx1
CAediting_178248	chr2_47384410_+	SINE	Alu	AluSx1
CAediting_178249	chr2_47384431_+	SINE	Alu	AluSx1
CAediting_178250	chr2_47384445_+	SINE	Alu	AluSx1
CAediting_178251	chr2_47384478_+	SINE	Alu	AluSx1
CAediting_178252	chr2_47384539_+	SINE	Alu	AluSx1
CAediting_178253	chr2_47384543_+	SINE	Alu	AluSx1
CAediting_178254	chr2_47384555_+	SINE	Alu	AluSx1
CAediting_178255	chr2_47384580_+	SINE	Alu	AluSx1
CAediting_178256	chr2_47384596_+	SINE	Alu	AluSx1
CAediting_178257	chr2_47384599_+	SINE	Alu	AluSx1
CAediting_178258	chr2_47384652_+	SINE	Alu	AluSx1
CAediting_178259	chr2_47384730_+	SINE	Alu	AluSx
CAediting_178260	chr2_47384777_+	SINE	Alu	AluSx
CAediting_178261	chr2_47384810_+	SINE	Alu	AluSx
CAediting_178262	chr2_47384811_+	SINE	Alu	AluSx
CAediting_178263	chr2_47384824_+	SINE	Alu	AluSx
CAediting_178264	chr2_47384836_+	SINE	Alu	AluSx
CAediting_178265	chr2_47384846_+	SINE	Alu	AluSx
CAediting_178266	chr2_47384848_+	SINE	Alu	AluSx
CAediting_178267	chr2_47384864_+	SINE	Alu	AluSx
CAediting_178268	chr2_47384881_+	SINE	Alu	AluSx
CAediting_178269	chr2_47384890_+	SINE	Alu	AluSx
CAediting_178270	chr2_47384904_+	SINE	Alu	AluSx
CAediting_178271	chr2_47384927_+	SINE	Alu	AluSx
CAediting_178272	chr2_47384941_+	SINE	Alu	AluSx
CAediting_178273	chr2_47384969_+	SINE	Alu	AluSx
CAediting_178274	chr2_47387262_+	SINE	Alu	AluSx4
CAediting_178275	chr2_47387274_+	SINE	Alu	AluSx4
CAediting_178276	chr2_47387301_+	SINE	Alu	AluSx4
CAediting_178277	chr2_47387320_+	SINE	Alu	AluSx4

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RNA A-to-I editing events in the alternative splicing sites for EPCAM

RNA A-to-I editing(s) in the alternative splicing sites.

AStype	CAeditomID	Editing position	AS position	AS direction	Exonic location	Wildtype sequence	Wildtype splicing strength	RNA edited sequence	RNA edited splicing strength
ES	CAediting_178041	chr2_47377330_+	47377329:47377337	5SS	2+0i	AAGGTTCAA	1.3	AGGGTTCAA	-6.59
ES	CAediting_178042	chr2_47377336_+	47377329:47377337	5SS	0+5i	AAGGTTCAA	1.3	AAGGTTCGA	5.49

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000119888.9.EPCAM.

Correlation between RNA A-to-I editing and PSI for ENSG00000119888.9.EPCAM.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for EPCAM

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for EPCAM

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for EPCAM

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1229415	chr17_67471547_+	ENSG00000119888.9	ENST00000405271	hsa-miR-548aa	47386777	47386784	8mer-1a	47386755	47386784	146	-11.28
CAediting_1229415	chr17_67471547_+	ENSG00000119888.9	ENST00000456133	hsa-miR-548aa	47386777	47386784	8mer-1a	47386755	47386784	146	-11.28

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for EPCAM

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST

ENST type

RNA structure without RNA A-to-I editing.

RNA structure with RNA A-to-I editing.

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID

ENST

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

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Relation with ADAR for EPCAM

Correlation between ADAR gene expression and RNA editing frequency

Cancer	CAeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
STAD	CAediting_178100	chr2_47378554_+	.	.	.	.	0.0454084858133796	0.281460513442105

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Relation with cancer stages for EPCAM

Correlation between Cancer stages and RNA editing frequency

Cancer	Stage_type	CAeditomID	position	P-val	Coeff.
STAD	pathologic_stage	CAediting_178080	chr2_47378110_+	0.0335274000661644	0.254454446838289

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Relation with survival for EPCAM

Correlation between RNA editing and survival

Cancer	CAeditomID	position	KMpvalue	Coxpvalue	CoxHR
STAD	CAediting_178124	chr2_47380209_+	0.0245664156543071	0.00262581	41.8247

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RelatedDrugs for EPCAM

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene	UniProtAcc	DrugBank ID	Drug name	Drug activity	Drug type	Drug status
EPCAM	P16422	DB11075	Hypromellose	Epithelial cell adhesion molecule	SmallMoleculeDrug	approved
EPCAM	P16422	DB06607	Catumaxomab	Epithelial cell adhesion molecule	BiotechDrug	approved\|investigational\|withdrawn
EPCAM	P16422	DB09336	Technetium Tc-99m nofetumomab merpentan	Epithelial cell adhesion molecule	SmallMoleculeDrug	approved\|withdrawn

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RelatedDiseases for EPCAM

Diseases associated with this gene.
(DisGeNet 7.0)

Gene	Disease ID	Disease name	# pubmeds	Source
EPCAM	C2750471	COLORECTAL CANCER, HEREDITARY NONPOLYPOSIS, TYPE 8	7	CLINGEN;CTD_human;GENOMICS_ENGLAND
EPCAM	C1333990	Hereditary Nonpolyposis Colorectal Cancer	3	CTD_human;ORPHANET
EPCAM	C2750737	DIARRHEA 5, WITH TUFTING ENTEROPATHY, CONGENITAL	3	CTD_human;GENOMICS_ENGLAND;ORPHANET;UNIPROT
EPCAM	C1112155	Hereditary non-polyposis colorectal cancer syndrome	2	ORPHANET
EPCAM	C0007097	Carcinoma	1	CTD_human
EPCAM	C0009405	Hereditary Nonpolyposis Colorectal Neoplasms	1	CTD_human
EPCAM	C0023893	Liver Cirrhosis, Experimental	1	CTD_human
EPCAM	C0024667	Animal Mammary Neoplasms	1	CTD_human
EPCAM	C0024668	Mammary Neoplasms, Experimental	1	CTD_human
EPCAM	C0030297	Pancreatic Neoplasm	1	CTD_human
EPCAM	C0033578	Prostatic Neoplasms	1	CTD_human
EPCAM	C0205696	Anaplastic carcinoma	1	CTD_human
EPCAM	C0205697	Carcinoma, Spindle-Cell	1	CTD_human
EPCAM	C0205698	Undifferentiated carcinoma	1	CTD_human
EPCAM	C0205699	Carcinomatosis	1	CTD_human
EPCAM	C0346647	Malignant neoplasm of pancreas	1	CTD_human
EPCAM	C0376358	Malignant neoplasm of prostate	1	CTD_human
EPCAM	C0919267	ovarian neoplasm	1	CTD_human
EPCAM	C1140680	Malignant neoplasm of ovary	1	CTD_human
EPCAM	C1257925	Mammary Carcinoma, Animal	1	CTD_human
EPCAM	C2931459	Lynch syndrome I (site-specific colonic cancer)	1	CTD_human
EPCAM	C4552100	Lynch Syndrome	1	CTD_human;GENOMICS_ENGLAND

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene