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![]() | Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples |
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![]() | The effects of the RNA editing to the stability of the RNA structures |
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Editing gene: MIR27A (CAeditome ID:407018) |
Gene summary for MIR27A |
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Gene information | Gene symbol | MIR27A | Gene ID | 407018 |
Gene name | microRNA 27a | |
Synonyms | MIR27|MIRN27A|mir-27a | |
Cytomap | 19p13.12 | |
Type of gene | ncRNA | |
Description | hsa-mir-27a | |
Modification date | 20210531 | |
UniProtAcc | . | |
Context | - 30365154(miR27a promotes human breast cancer cell migration by inducing EMT in a FBXW7dependent manner) |
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Gene | GO ID | GO term | PubMed ID |
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RNA A-to-I events for MIR27A |
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CAediting_1306321(13836454, -), CAediting_1306322(13836455, -), CAediting_1306323(13836462, -), CAediting_1306324(13836464, -), CAediting_1306325(13836501, -), CAediting_1306326(13836508, -), CAediting_1306327(13836514, -), |
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RNA editing positional annotations for MIR27A using Annovar |
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CAeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
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CAeditome ID | Position | Variant type |
CAediting_1306321 | chr19_13836454_- | ncRNA_exonic |
CAediting_1306322 | chr19_13836455_- | ncRNA_exonic |
CAediting_1306323 | chr19_13836462_- | ncRNA_exonic |
CAediting_1306324 | chr19_13836464_- | ncRNA_exonic |
CAediting_1306325 | chr19_13836501_- | ncRNA_exonic |
CAediting_1306326 | chr19_13836508_- | ncRNA_exonic |
CAediting_1306327 | chr19_13836514_- | ncRNA_exonic |
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CAeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
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RNA A-to-I editing events in the alternative splicing sites for MIR27A |
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AStype | CAeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
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Differntial gene expression between RNA A-to-I edited versus non-edited samples for MIR27A |
![]() * The grey color means N/A. |
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Protein coding region RNA A-to-I editings for MIR27A |
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The effects of the RNA editing to the miRNA binding sites for MIR27A |
**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page. |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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The effects of the RNA editing to the stability of the RNA structures for MIR27A |
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ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
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CAeditom_ID | ENST | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
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Relation with ADAR for MIR27A |
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Cancer | CAeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
BRCA | CAediting_1306327 | chr19_13836514_- | 0.000146727906305859 | 0.494030948436936 | . | . | . | . |
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Relation with cancer stages for MIR27A |
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Cancer | Stage_type | CAeditomID | position | P-val | Coeff. |
KIRC | pathologic_stage | CAediting_1306327 | chr19_13836514_- | 0.00442370430029354 | 0.353992448424949 |
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Relation with survival for MIR27A |
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Cancer | CAeditomID | position | KMpvalue | Coxpvalue | CoxHR |
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RelatedDrugs for MIR27A |
![]() (DrugBank Version 5.1.8 2021-01-03) |
Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for MIR27A |
![]() (DisGeNet 7.0) |
Gene | Disease ID | Disease name | # pubmeds | Source |
MIR27A | C0011860 | Diabetes Mellitus, Non-Insulin-Dependent | 1 | CTD_human |
MIR27A | C0027055 | Myocardial Reperfusion Injury | 1 | CTD_human |
MIR27A | C0030305 | Pancreatitis | 1 | CTD_human |