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Editing gene: LINC00884 (CAeditome ID:401106)

Gene summary for LINC00884

Gene summary

Gene information	Gene symbol	LINC00884
	Gene ID	401106
	Gene name	long intergenic non-protein coding RNA 884
	Synonyms	-
	Cytomap	3q29
	Type of gene	ncRNA
	Description	-
	Modification date	20210518
	UniProtAcc	.
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene

GO ID

GO term

PubMed ID

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RNA A-to-I events for LINC00884

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000233058.1

RNA A-to-I editing events in Cancer.

CAediting_334801(194501675, +), CAediting_334802(194501681, +), CAediting_334803(194501682, +), CAediting_334804(194501704, +), CAediting_334805(194501712, +), CAediting_334806(194501725, +), CAediting_334807(194501736, +), CAediting_334808(194501783, +), CAediting_334809(194501784, +), CAediting_334810(194501785, +), CAediting_334811(194501788, +), CAediting_334812(194501814, +), CAediting_334813(194501815, +), CAediting_334814(194501828, +), CAediting_334815(194501860, +), CAediting_334816(194501890, +), CAediting_334817(194502073, +), CAediting_334818(194502075, +), CAediting_334819(194502585, +), CAediting_334820(194502593, +), CAediting_334821(194502612, +), CAediting_334822(194502641, +), CAediting_334823(194502655, +), CAediting_334824(194502661, +), CAediting_334825(194502662, +), CAediting_334826(194502679, +), CAediting_334827(194502696, +), CAediting_334828(194502701, +), CAediting_334829(194502703, +), CAediting_334830(194502719, +), CAediting_334831(194502723, +), CAediting_334832(194502745, +), CAediting_334833(194502759, +), CAediting_334834(194502765, +), CAediting_334835(194502779, +), CAediting_334836(194502780, +), CAediting_334837(194502823, +), CAediting_334838(194502824, +), CAediting_334839(194502836, +), CAediting_334840(194502838, +), CAediting_334841(194502842, +), CAediting_334842(194503937, +), CAediting_334843(194503941, +), CAediting_334844(194503949, +), CAediting_334845(194503996, +), CAediting_334846(194503997, +), CAediting_334847(194504009, +), CAediting_334848(194504036, +), CAediting_334849(194504042, +), CAediting_334850(194504087, +), CAediting_334851(194504539, +), CAediting_334852(194504546, +), CAediting_334853(194504552, +), CAediting_334854(194504606, +), CAediting_334855(194504619, +), CAediting_334856(194504640, +), CAediting_334857(194504649, +), CAediting_334858(194504650, +), CAediting_334859(194504680, +), CAediting_334860(194504681, +), CAediting_334861(194504693, +), CAediting_334862(194504707, +), CAediting_334863(194504744, +), CAediting_334864(194504766, +), CAediting_334865(194504774, +), CAediting_334866(194505014, +), CAediting_334867(194505037, +), CAediting_334868(194505061, +), CAediting_334869(194505074, +), CAediting_334870(194505077, +), CAediting_334871(194505078, +), CAediting_334872(194505081, +), CAediting_334873(194505082, +), CAediting_334874(194505089, +), CAediting_334875(194505090, +), CAediting_334876(194505093, +), CAediting_334877(194505097, +), CAediting_334878(194505119, +), CAediting_334879(194505146, +), CAediting_334880(194505155, +), CAediting_334881(194505160, +), CAediting_334882(194505165, +), CAediting_334883(194505175, +), CAediting_334884(194506771, +), CAediting_334885(194506777, +), CAediting_334886(194506778, +), CAediting_334887(194506800, +), CAediting_334888(194506834, +), CAediting_334889(194506851, +), CAediting_334890(194506872, +), CAediting_334891(194506873, +), CAediting_334892(194506874, +), CAediting_334893(194506878, +), CAediting_334894(194506882, +), CAediting_334895(194506883, +), CAediting_334896(194506887, +), CAediting_334897(194506923, +), CAediting_334898(194506936, +), CAediting_334899(194506940, +), CAediting_334900(194506941, +), CAediting_334901(194506946, +), CAediting_334902(194506954, +), CAediting_334903(194506955, +), CAediting_334904(194506963, +), CAediting_334905(194506969, +), CAediting_334906(194506975, +), CAediting_334907(194508161, +), CAediting_334908(194508169, +), CAediting_334909(194508223, +), CAediting_334910(194508230, +), CAediting_334911(194508247, +), CAediting_334912(194508256, +), CAediting_334913(194508259, +), CAediting_334914(194508264, +), CAediting_334915(194508291, +), CAediting_334916(194508315, +), CAediting_334917(194508332, +), CAediting_334918(194508367, +), CAediting_334919(194509307, +), CAediting_334920(194509323, +), CAediting_334921(194509363, +), CAediting_334922(194509370, +), CAediting_334923(194509377, +), CAediting_334924(194509383, +), CAediting_334925(194509387, +), CAediting_334926(194509401, +), CAediting_334927(194509402, +), CAediting_334928(194509413, +), CAediting_334929(194509436, +), CAediting_334930(194509449, +), CAediting_334931(194509450, +), CAediting_334932(194509458, +), CAediting_334933(194509467, +), CAediting_334934(194509512, +), CAediting_334935(194509519, +), CAediting_334936(194509520, +), CAediting_334937(194509530, +), CAediting_334938(194509535, +), CAediting_334939(194509544, +), CAediting_334940(194509545, +), CAediting_334941(194509551, +), CAediting_334942(194509552, +), CAediting_334943(194509557, +), CAediting_334944(194509559, +), CAediting_334945(194509563, +), CAediting_334946(194509634, +), CAediting_334947(194509663, +), CAediting_334948(194509696, +), CAediting_334949(194509701, +), CAediting_334950(194509723, +), CAediting_334951(194509839, +), CAediting_334952(194509840, +), CAediting_334953(194509853, +), CAediting_334954(194509854, +), CAediting_334955(194509871, +), CAediting_334956(194509893, +), CAediting_334957(194509896, +), CAediting_334958(194509901, +), CAediting_334959(194509902, +), CAediting_334960(194510477, +), CAediting_334961(194510493, +), CAediting_334962(194510515, +), CAediting_334963(194510525, +), CAediting_334964(194510538, +), CAediting_334965(194510542, +), CAediting_334966(194510556, +), CAediting_334967(194510561, +), CAediting_334968(194510564, +), CAediting_334969(194510603, +), CAediting_334970(194510618, +), CAediting_334971(194510631, +), CAediting_334972(194510648, +), CAediting_334973(194510650, +), CAediting_334974(194510653, +), CAediting_334975(194510796, +), CAediting_334976(194510804, +), CAediting_334977(194510806, +), CAediting_334978(194510812, +), CAediting_334979(194510813, +), CAediting_334980(194510818, +), CAediting_334981(194510821, +), CAediting_334982(194510829, +), CAediting_334983(194510848, +), CAediting_334984(194510858, +), CAediting_334985(194510869, +), CAediting_334986(194510872, +), CAediting_334987(194510889, +), CAediting_334988(194510891, +), CAediting_334989(194510901, +), CAediting_334990(194510902, +), CAediting_334991(194510903, +), CAediting_334992(194510904, +), CAediting_334993(194510906, +), CAediting_334994(194510908, +), CAediting_334995(194510909, +), CAediting_334996(194510910, +), CAediting_334997(194510911, +), CAediting_334998(194510912, +), CAediting_334999(194510913, +), CAediting_335000(194510916, +), CAediting_335001(194510920, +), CAediting_335002(194510921, +), CAediting_335003(194510932, +), CAediting_335004(194510936, +), CAediting_335005(194510942, +), CAediting_335006(194510943, +), CAediting_335007(194510948, +), CAediting_335008(194510951, +), CAediting_335009(194510952, +), CAediting_335010(194510956, +), CAediting_335011(194510959, +), CAediting_335012(194510965, +), CAediting_335013(194510972, +), CAediting_335014(194510975, +), CAediting_335015(194510983, +), CAediting_335016(194510984, +), CAediting_335017(194510995, +), CAediting_335018(194511010, +), CAediting_335019(194511022, +), CAediting_335020(194511025, +), CAediting_335021(194511044, +), CAediting_335022(194511049, +), CAediting_335023(194511858, +), CAediting_335024(194512381, +), CAediting_335025(194512495, +), CAediting_335026(194512503, +), CAediting_335027(194512507, +), CAediting_335028(194512513, +), CAediting_335029(194512549, +), CAediting_335030(194512562, +), CAediting_335031(194513446, +), CAediting_335032(194513493, +), CAediting_335033(194513560, +), CAediting_335034(194513561, +), CAediting_335035(194513575, +), CAediting_335036(194513577, +), CAediting_335037(194513583, +), CAediting_335038(194513591, +), CAediting_335039(194513596, +), CAediting_335040(194513601, +), CAediting_335041(194513606, +), CAediting_335042(194513617, +), CAediting_335043(194513620, +), CAediting_335044(194513632, +), CAediting_335045(194513637, +), CAediting_335046(194513638, +), CAediting_335047(194513639, +), CAediting_335048(194513640, +), CAediting_335049(194513645, +), CAediting_335050(194513660, +), CAediting_335051(194513665, +), CAediting_335052(194513669, +), CAediting_335053(194513673, +), CAediting_335054(194513689, +), CAediting_335055(194513724, +), CAediting_335056(194513730, +), CAediting_335057(194513735, +), CAediting_335058(194513747, +), CAediting_335059(194513764, +), CAediting_335060(194513765, +), CAediting_335061(194513775, +), CAediting_335062(194514579, +), CAediting_335063(194515404, +), CAediting_335064(194518211, +), CAediting_335065(194518213, +), CAediting_335066(194518243, +), CAediting_335067(194518263, +),

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RNA editing positional annotations for LINC00884 using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_334801	chr3_194501675_+	ncRNA_intronic
CAediting_334802	chr3_194501681_+	ncRNA_intronic
CAediting_334803	chr3_194501682_+	ncRNA_intronic
CAediting_334804	chr3_194501704_+	ncRNA_intronic
CAediting_334805	chr3_194501712_+	ncRNA_intronic
CAediting_334806	chr3_194501725_+	ncRNA_intronic
CAediting_334807	chr3_194501736_+	ncRNA_intronic
CAediting_334808	chr3_194501783_+	ncRNA_intronic
CAediting_334809	chr3_194501784_+	ncRNA_intronic
CAediting_334810	chr3_194501785_+	ncRNA_intronic
CAediting_334811	chr3_194501788_+	ncRNA_intronic
CAediting_334812	chr3_194501814_+	ncRNA_intronic
CAediting_334813	chr3_194501815_+	ncRNA_intronic
CAediting_334814	chr3_194501828_+	ncRNA_intronic
CAediting_334815	chr3_194501860_+	ncRNA_intronic
CAediting_334816	chr3_194501890_+	ncRNA_intronic
CAediting_334817	chr3_194502073_+	ncRNA_intronic
CAediting_334818	chr3_194502075_+	ncRNA_intronic
CAediting_334819	chr3_194502585_+	ncRNA_intronic
CAediting_334820	chr3_194502593_+	ncRNA_intronic
CAediting_334821	chr3_194502612_+	ncRNA_intronic
CAediting_334822	chr3_194502641_+	ncRNA_intronic
CAediting_334823	chr3_194502655_+	ncRNA_intronic
CAediting_334824	chr3_194502661_+	ncRNA_intronic
CAediting_334825	chr3_194502662_+	ncRNA_intronic
CAediting_334826	chr3_194502679_+	ncRNA_intronic
CAediting_334827	chr3_194502696_+	ncRNA_intronic
CAediting_334828	chr3_194502701_+	ncRNA_intronic
CAediting_334829	chr3_194502703_+	ncRNA_intronic
CAediting_334830	chr3_194502719_+	ncRNA_intronic
CAediting_334831	chr3_194502723_+	ncRNA_intronic
CAediting_334832	chr3_194502745_+	ncRNA_intronic
CAediting_334833	chr3_194502759_+	ncRNA_intronic
CAediting_334834	chr3_194502765_+	ncRNA_intronic
CAediting_334835	chr3_194502779_+	ncRNA_intronic
CAediting_334836	chr3_194502780_+	ncRNA_intronic
CAediting_334837	chr3_194502823_+	ncRNA_intronic
CAediting_334838	chr3_194502824_+	ncRNA_intronic
CAediting_334839	chr3_194502836_+	ncRNA_intronic
CAediting_334840	chr3_194502838_+	ncRNA_intronic
CAediting_334841	chr3_194502842_+	ncRNA_intronic
CAediting_334842	chr3_194503937_+	ncRNA_intronic
CAediting_334843	chr3_194503941_+	ncRNA_intronic
CAediting_334844	chr3_194503949_+	ncRNA_intronic
CAediting_334845	chr3_194503996_+	ncRNA_intronic
CAediting_334846	chr3_194503997_+	ncRNA_intronic
CAediting_334847	chr3_194504009_+	ncRNA_intronic
CAediting_334848	chr3_194504036_+	ncRNA_intronic
CAediting_334849	chr3_194504042_+	ncRNA_intronic
CAediting_334850	chr3_194504087_+	ncRNA_intronic
CAediting_334851	chr3_194504539_+	ncRNA_intronic
CAediting_334852	chr3_194504546_+	ncRNA_intronic
CAediting_334853	chr3_194504552_+	ncRNA_intronic
CAediting_334854	chr3_194504606_+	ncRNA_intronic
CAediting_334855	chr3_194504619_+	ncRNA_intronic
CAediting_334856	chr3_194504640_+	ncRNA_intronic
CAediting_334857	chr3_194504649_+	ncRNA_intronic
CAediting_334858	chr3_194504650_+	ncRNA_intronic
CAediting_334859	chr3_194504680_+	ncRNA_intronic
CAediting_334860	chr3_194504681_+	ncRNA_intronic
CAediting_334861	chr3_194504693_+	ncRNA_intronic
CAediting_334862	chr3_194504707_+	ncRNA_intronic
CAediting_334863	chr3_194504744_+	ncRNA_intronic
CAediting_334864	chr3_194504766_+	ncRNA_intronic
CAediting_334865	chr3_194504774_+	ncRNA_intronic
CAediting_334866	chr3_194505014_+	ncRNA_intronic
CAediting_334867	chr3_194505037_+	ncRNA_intronic
CAediting_334868	chr3_194505061_+	ncRNA_intronic
CAediting_334869	chr3_194505074_+	ncRNA_intronic
CAediting_334870	chr3_194505077_+	ncRNA_intronic
CAediting_334871	chr3_194505078_+	ncRNA_intronic
CAediting_334872	chr3_194505081_+	ncRNA_intronic
CAediting_334873	chr3_194505082_+	ncRNA_intronic
CAediting_334874	chr3_194505089_+	ncRNA_intronic
CAediting_334875	chr3_194505090_+	ncRNA_intronic
CAediting_334876	chr3_194505093_+	ncRNA_intronic
CAediting_334877	chr3_194505097_+	ncRNA_intronic
CAediting_334878	chr3_194505119_+	ncRNA_intronic
CAediting_334879	chr3_194505146_+	ncRNA_intronic
CAediting_334880	chr3_194505155_+	ncRNA_intronic
CAediting_334881	chr3_194505160_+	ncRNA_intronic
CAediting_334882	chr3_194505165_+	ncRNA_intronic
CAediting_334883	chr3_194505175_+	ncRNA_intronic
CAediting_334884	chr3_194506771_+	ncRNA_intronic
CAediting_334885	chr3_194506777_+	ncRNA_intronic
CAediting_334886	chr3_194506778_+	ncRNA_intronic
CAediting_334887	chr3_194506800_+	ncRNA_intronic
CAediting_334888	chr3_194506834_+	ncRNA_intronic
CAediting_334889	chr3_194506851_+	ncRNA_intronic
CAediting_334890	chr3_194506872_+	ncRNA_intronic
CAediting_334891	chr3_194506873_+	ncRNA_intronic
CAediting_334892	chr3_194506874_+	ncRNA_intronic
CAediting_334893	chr3_194506878_+	ncRNA_intronic
CAediting_334894	chr3_194506882_+	ncRNA_intronic
CAediting_334895	chr3_194506883_+	ncRNA_intronic
CAediting_334896	chr3_194506887_+	ncRNA_intronic
CAediting_334897	chr3_194506923_+	ncRNA_intronic
CAediting_334898	chr3_194506936_+	ncRNA_intronic
CAediting_334899	chr3_194506940_+	ncRNA_intronic
CAediting_334900	chr3_194506941_+	ncRNA_intronic
CAediting_334901	chr3_194506946_+	ncRNA_intronic
CAediting_334902	chr3_194506954_+	ncRNA_intronic
CAediting_334903	chr3_194506955_+	ncRNA_intronic
CAediting_334904	chr3_194506963_+	ncRNA_intronic
CAediting_334905	chr3_194506969_+	ncRNA_intronic
CAediting_334906	chr3_194506975_+	ncRNA_intronic
CAediting_334907	chr3_194508161_+	ncRNA_intronic
CAediting_334908	chr3_194508169_+	ncRNA_intronic
CAediting_334909	chr3_194508223_+	ncRNA_intronic
CAediting_334910	chr3_194508230_+	ncRNA_intronic
CAediting_334911	chr3_194508247_+	ncRNA_intronic
CAediting_334912	chr3_194508256_+	ncRNA_intronic
CAediting_334913	chr3_194508259_+	ncRNA_intronic
CAediting_334914	chr3_194508264_+	ncRNA_intronic
CAediting_334915	chr3_194508291_+	ncRNA_intronic
CAediting_334916	chr3_194508315_+	ncRNA_intronic
CAediting_334917	chr3_194508332_+	ncRNA_intronic
CAediting_334918	chr3_194508367_+	ncRNA_intronic
CAediting_334919	chr3_194509307_+	ncRNA_intronic
CAediting_334920	chr3_194509323_+	ncRNA_intronic
CAediting_334921	chr3_194509363_+	ncRNA_intronic
CAediting_334922	chr3_194509370_+	ncRNA_intronic
CAediting_334923	chr3_194509377_+	ncRNA_intronic
CAediting_334924	chr3_194509383_+	ncRNA_intronic
CAediting_334925	chr3_194509387_+	ncRNA_intronic
CAediting_334926	chr3_194509401_+	ncRNA_intronic
CAediting_334927	chr3_194509402_+	ncRNA_intronic
CAediting_334928	chr3_194509413_+	ncRNA_intronic
CAediting_334929	chr3_194509436_+	ncRNA_intronic
CAediting_334930	chr3_194509449_+	ncRNA_intronic
CAediting_334931	chr3_194509450_+	ncRNA_intronic
CAediting_334932	chr3_194509458_+	ncRNA_intronic
CAediting_334933	chr3_194509467_+	ncRNA_intronic
CAediting_334934	chr3_194509512_+	ncRNA_intronic
CAediting_334935	chr3_194509519_+	ncRNA_intronic
CAediting_334936	chr3_194509520_+	ncRNA_intronic
CAediting_334937	chr3_194509530_+	ncRNA_intronic
CAediting_334938	chr3_194509535_+	ncRNA_intronic
CAediting_334939	chr3_194509544_+	ncRNA_intronic
CAediting_334940	chr3_194509545_+	ncRNA_intronic
CAediting_334941	chr3_194509551_+	ncRNA_intronic
CAediting_334942	chr3_194509552_+	ncRNA_intronic
CAediting_334943	chr3_194509557_+	ncRNA_intronic
CAediting_334944	chr3_194509559_+	ncRNA_intronic
CAediting_334945	chr3_194509563_+	ncRNA_intronic
CAediting_334946	chr3_194509634_+	ncRNA_intronic
CAediting_334947	chr3_194509663_+	ncRNA_intronic
CAediting_334948	chr3_194509696_+	ncRNA_intronic
CAediting_334949	chr3_194509701_+	ncRNA_intronic
CAediting_334950	chr3_194509723_+	ncRNA_intronic
CAediting_334951	chr3_194509839_+	ncRNA_intronic
CAediting_334952	chr3_194509840_+	ncRNA_intronic
CAediting_334953	chr3_194509853_+	ncRNA_intronic
CAediting_334954	chr3_194509854_+	ncRNA_intronic
CAediting_334955	chr3_194509871_+	ncRNA_intronic
CAediting_334956	chr3_194509893_+	ncRNA_intronic
CAediting_334957	chr3_194509896_+	ncRNA_intronic
CAediting_334958	chr3_194509901_+	ncRNA_intronic
CAediting_334959	chr3_194509902_+	ncRNA_intronic
CAediting_334960	chr3_194510477_+	ncRNA_exonic
CAediting_334961	chr3_194510493_+	ncRNA_exonic
CAediting_334962	chr3_194510515_+	ncRNA_exonic
CAediting_334963	chr3_194510525_+	ncRNA_exonic
CAediting_334964	chr3_194510538_+	ncRNA_exonic
CAediting_334965	chr3_194510542_+	ncRNA_exonic
CAediting_334966	chr3_194510556_+	ncRNA_exonic
CAediting_334967	chr3_194510561_+	ncRNA_exonic
CAediting_334968	chr3_194510564_+	ncRNA_exonic
CAediting_334969	chr3_194510603_+	ncRNA_exonic
CAediting_334970	chr3_194510618_+	ncRNA_exonic
CAediting_334971	chr3_194510631_+	ncRNA_exonic
CAediting_334972	chr3_194510648_+	ncRNA_intronic
CAediting_334973	chr3_194510650_+	ncRNA_intronic
CAediting_334974	chr3_194510653_+	ncRNA_intronic
CAediting_334975	chr3_194510796_+	ncRNA_intronic
CAediting_334976	chr3_194510804_+	ncRNA_intronic
CAediting_334977	chr3_194510806_+	ncRNA_intronic
CAediting_334978	chr3_194510812_+	ncRNA_intronic
CAediting_334979	chr3_194510813_+	ncRNA_intronic
CAediting_334980	chr3_194510818_+	ncRNA_intronic
CAediting_334981	chr3_194510821_+	ncRNA_intronic
CAediting_334982	chr3_194510829_+	ncRNA_intronic
CAediting_334983	chr3_194510848_+	ncRNA_intronic
CAediting_334984	chr3_194510858_+	ncRNA_intronic
CAediting_334985	chr3_194510869_+	ncRNA_intronic
CAediting_334986	chr3_194510872_+	ncRNA_intronic
CAediting_334987	chr3_194510889_+	ncRNA_intronic
CAediting_334988	chr3_194510891_+	ncRNA_intronic
CAediting_334989	chr3_194510901_+	ncRNA_intronic
CAediting_334990	chr3_194510902_+	ncRNA_intronic
CAediting_334991	chr3_194510903_+	ncRNA_intronic
CAediting_334992	chr3_194510904_+	ncRNA_intronic
CAediting_334993	chr3_194510906_+	ncRNA_intronic
CAediting_334994	chr3_194510908_+	ncRNA_intronic
CAediting_334995	chr3_194510909_+	ncRNA_intronic
CAediting_334996	chr3_194510910_+	ncRNA_intronic
CAediting_334997	chr3_194510911_+	ncRNA_intronic
CAediting_334998	chr3_194510912_+	ncRNA_intronic
CAediting_334999	chr3_194510913_+	ncRNA_intronic
CAediting_335000	chr3_194510916_+	ncRNA_intronic
CAediting_335001	chr3_194510920_+	ncRNA_intronic
CAediting_335002	chr3_194510921_+	ncRNA_intronic
CAediting_335003	chr3_194510932_+	ncRNA_intronic
CAediting_335004	chr3_194510936_+	ncRNA_intronic
CAediting_335005	chr3_194510942_+	ncRNA_intronic
CAediting_335006	chr3_194510943_+	ncRNA_intronic
CAediting_335007	chr3_194510948_+	ncRNA_intronic
CAediting_335008	chr3_194510951_+	ncRNA_intronic
CAediting_335009	chr3_194510952_+	ncRNA_intronic
CAediting_335010	chr3_194510956_+	ncRNA_intronic
CAediting_335011	chr3_194510959_+	ncRNA_intronic
CAediting_335012	chr3_194510965_+	ncRNA_intronic
CAediting_335013	chr3_194510972_+	ncRNA_intronic
CAediting_335014	chr3_194510975_+	ncRNA_intronic
CAediting_335015	chr3_194510983_+	ncRNA_intronic
CAediting_335016	chr3_194510984_+	ncRNA_intronic
CAediting_335017	chr3_194510995_+	ncRNA_intronic
CAediting_335018	chr3_194511010_+	ncRNA_intronic
CAediting_335019	chr3_194511022_+	ncRNA_intronic
CAediting_335020	chr3_194511025_+	ncRNA_intronic
CAediting_335021	chr3_194511044_+	ncRNA_intronic
CAediting_335022	chr3_194511049_+	ncRNA_intronic
CAediting_335023	chr3_194511858_+	ncRNA_intronic
CAediting_335024	chr3_194512381_+	ncRNA_intronic
CAediting_335025	chr3_194512495_+	ncRNA_intronic
CAediting_335026	chr3_194512503_+	ncRNA_intronic
CAediting_335027	chr3_194512507_+	ncRNA_intronic
CAediting_335028	chr3_194512513_+	ncRNA_intronic
CAediting_335029	chr3_194512549_+	ncRNA_intronic
CAediting_335030	chr3_194512562_+	ncRNA_intronic
CAediting_335031	chr3_194513446_+	ncRNA_intronic
CAediting_335032	chr3_194513493_+	ncRNA_intronic
CAediting_335033	chr3_194513560_+	ncRNA_intronic
CAediting_335034	chr3_194513561_+	ncRNA_intronic
CAediting_335035	chr3_194513575_+	ncRNA_intronic
CAediting_335036	chr3_194513577_+	ncRNA_intronic
CAediting_335037	chr3_194513583_+	ncRNA_intronic
CAediting_335038	chr3_194513591_+	ncRNA_intronic
CAediting_335039	chr3_194513596_+	ncRNA_intronic
CAediting_335040	chr3_194513601_+	ncRNA_intronic
CAediting_335041	chr3_194513606_+	ncRNA_intronic
CAediting_335042	chr3_194513617_+	ncRNA_intronic
CAediting_335043	chr3_194513620_+	ncRNA_intronic
CAediting_335044	chr3_194513632_+	ncRNA_intronic
CAediting_335045	chr3_194513637_+	ncRNA_intronic
CAediting_335046	chr3_194513638_+	ncRNA_intronic
CAediting_335047	chr3_194513639_+	ncRNA_intronic
CAediting_335048	chr3_194513640_+	ncRNA_intronic
CAediting_335049	chr3_194513645_+	ncRNA_intronic
CAediting_335050	chr3_194513660_+	ncRNA_intronic
CAediting_335051	chr3_194513665_+	ncRNA_intronic
CAediting_335052	chr3_194513669_+	ncRNA_intronic
CAediting_335053	chr3_194513673_+	ncRNA_intronic
CAediting_335054	chr3_194513689_+	ncRNA_intronic
CAediting_335055	chr3_194513724_+	ncRNA_intronic
CAediting_335056	chr3_194513730_+	ncRNA_intronic
CAediting_335057	chr3_194513735_+	ncRNA_intronic
CAediting_335058	chr3_194513747_+	ncRNA_intronic
CAediting_335059	chr3_194513764_+	ncRNA_intronic
CAediting_335060	chr3_194513765_+	ncRNA_intronic
CAediting_335061	chr3_194513775_+	ncRNA_intronic
CAediting_335062	chr3_194514579_+	ncRNA_intronic
CAediting_335063	chr3_194515404_+	ncRNA_intronic
CAediting_335064	chr3_194518211_+	ncRNA_exonic
CAediting_335065	chr3_194518213_+	ncRNA_exonic
CAediting_335066	chr3_194518243_+	ncRNA_exonic
CAediting_335067	chr3_194518263_+	ncRNA_exonic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_334801	chr3_194501675_+	SINE	Alu	AluSg
CAediting_334802	chr3_194501681_+	SINE	Alu	AluSg
CAediting_334803	chr3_194501682_+	SINE	Alu	AluSg
CAediting_334804	chr3_194501704_+	SINE	Alu	AluSg
CAediting_334805	chr3_194501712_+	SINE	Alu	AluSg
CAediting_334806	chr3_194501725_+	SINE	Alu	AluSg
CAediting_334807	chr3_194501736_+	SINE	Alu	AluSg
CAediting_334808	chr3_194501783_+	SINE	Alu	AluSg
CAediting_334809	chr3_194501784_+	SINE	Alu	AluSg
CAediting_334810	chr3_194501785_+	SINE	Alu	AluSg
CAediting_334811	chr3_194501788_+	SINE	Alu	AluSg
CAediting_334812	chr3_194501814_+	SINE	Alu	AluSg
CAediting_334813	chr3_194501815_+	SINE	Alu	AluSg
CAediting_334814	chr3_194501828_+	SINE	Alu	AluSg
CAediting_334815	chr3_194501860_+	SINE	Alu	AluSg
CAediting_334816	chr3_194501890_+	SINE	Alu	AluSg
CAediting_334817	chr3_194502073_+	SINE	Alu	FLAM_C
CAediting_334818	chr3_194502075_+	SINE	Alu	FLAM_C
CAediting_334819	chr3_194502585_+	SINE	Alu	AluSx
CAediting_334820	chr3_194502593_+	SINE	Alu	AluSx
CAediting_334821	chr3_194502612_+	SINE	Alu	AluSx
CAediting_334822	chr3_194502641_+	SINE	Alu	AluSx
CAediting_334823	chr3_194502655_+	SINE	Alu	AluSx
CAediting_334824	chr3_194502661_+	SINE	Alu	AluSx
CAediting_334825	chr3_194502662_+	SINE	Alu	AluSx
CAediting_334826	chr3_194502679_+	SINE	Alu	AluSx
CAediting_334827	chr3_194502696_+	SINE	Alu	AluSx
CAediting_334828	chr3_194502701_+	SINE	Alu	AluSx
CAediting_334829	chr3_194502703_+	SINE	Alu	AluSx
CAediting_334830	chr3_194502719_+	SINE	Alu	AluSx
CAediting_334831	chr3_194502723_+	SINE	Alu	AluSx
CAediting_334832	chr3_194502745_+	SINE	Alu	AluSx
CAediting_334833	chr3_194502759_+	SINE	Alu	AluSx
CAediting_334834	chr3_194502765_+	SINE	Alu	AluSx
CAediting_334835	chr3_194502779_+	SINE	Alu	AluSx
CAediting_334836	chr3_194502780_+	SINE	Alu	AluSx
CAediting_334837	chr3_194502823_+	SINE	Alu	AluSx
CAediting_334838	chr3_194502824_+	SINE	Alu	AluSx
CAediting_334839	chr3_194502836_+	SINE	Alu	AluSx
CAediting_334840	chr3_194502838_+	SINE	Alu	AluSx
CAediting_334841	chr3_194502842_+	SINE	Alu	AluSx
CAediting_334842	chr3_194503937_+	SINE	Alu	AluJr
CAediting_334843	chr3_194503941_+	SINE	Alu	AluJr
CAediting_334844	chr3_194503949_+	SINE	Alu	AluJr
CAediting_334845	chr3_194503996_+	SINE	Alu	AluJr
CAediting_334846	chr3_194503997_+	SINE	Alu	AluJr
CAediting_334847	chr3_194504009_+	SINE	Alu	AluJr
CAediting_334848	chr3_194504036_+	SINE	Alu	AluJr
CAediting_334849	chr3_194504042_+	SINE	Alu	AluJr
CAediting_334850	chr3_194504087_+	SINE	Alu	AluJr
CAediting_334851	chr3_194504539_+	SINE	Alu	AluSx1
CAediting_334852	chr3_194504546_+	SINE	Alu	AluSx1
CAediting_334853	chr3_194504552_+	SINE	Alu	AluSx1
CAediting_334854	chr3_194504606_+	SINE	Alu	AluSx1
CAediting_334855	chr3_194504619_+	SINE	Alu	AluSx1
CAediting_334856	chr3_194504640_+	SINE	Alu	AluSx1
CAediting_334857	chr3_194504649_+	SINE	Alu	AluSx1
CAediting_334858	chr3_194504650_+	SINE	Alu	AluSx1
CAediting_334859	chr3_194504680_+	SINE	Alu	AluSx1
CAediting_334860	chr3_194504681_+	SINE	Alu	AluSx1
CAediting_334861	chr3_194504693_+	SINE	Alu	AluSx1
CAediting_334862	chr3_194504707_+	SINE	Alu	AluSx1
CAediting_334863	chr3_194504744_+	SINE	Alu	AluSx1
CAediting_334864	chr3_194504766_+	SINE	Alu	AluSx1
CAediting_334865	chr3_194504774_+	SINE	Alu	AluSx1
CAediting_334866	chr3_194505014_+	SINE	Alu	AluJb
CAediting_334867	chr3_194505037_+	SINE	Alu	AluJb
CAediting_334868	chr3_194505061_+	SINE	Alu	AluJb
CAediting_334869	chr3_194505074_+	SINE	Alu	AluJb
CAediting_334870	chr3_194505077_+	SINE	Alu	AluJb
CAediting_334871	chr3_194505078_+	SINE	Alu	AluJb
CAediting_334872	chr3_194505081_+	SINE	Alu	AluJb
CAediting_334873	chr3_194505082_+	SINE	Alu	AluJb
CAediting_334874	chr3_194505089_+	SINE	Alu	AluJb
CAediting_334875	chr3_194505090_+	SINE	Alu	AluJb
CAediting_334876	chr3_194505093_+	SINE	Alu	AluJb
CAediting_334877	chr3_194505097_+	SINE	Alu	AluJb
CAediting_334878	chr3_194505119_+	SINE	Alu	AluJb
CAediting_334879	chr3_194505146_+	SINE	Alu	AluJb
CAediting_334880	chr3_194505155_+	SINE	Alu	AluJb
CAediting_334881	chr3_194505160_+	SINE	Alu	AluJb
CAediting_334882	chr3_194505165_+	SINE	Alu	AluJb
CAediting_334883	chr3_194505175_+	SINE	Alu	AluJb
CAediting_334884	chr3_194506771_+	SINE	Alu	AluSx1
CAediting_334885	chr3_194506777_+	SINE	Alu	AluSx1
CAediting_334886	chr3_194506778_+	SINE	Alu	AluSx1
CAediting_334887	chr3_194506800_+	SINE	Alu	AluSx1
CAediting_334888	chr3_194506834_+	SINE	Alu	AluSx1
CAediting_334889	chr3_194506851_+	SINE	Alu	AluSx1
CAediting_334890	chr3_194506872_+	SINE	Alu	AluSx1
CAediting_334891	chr3_194506873_+	SINE	Alu	AluSx1
CAediting_334892	chr3_194506874_+	SINE	Alu	AluSx1
CAediting_334893	chr3_194506878_+	SINE	Alu	AluSx1
CAediting_334894	chr3_194506882_+	SINE	Alu	AluSx1
CAediting_334895	chr3_194506883_+	SINE	Alu	AluSx1
CAediting_334896	chr3_194506887_+	SINE	Alu	AluSx1
CAediting_334897	chr3_194506923_+	SINE	Alu	AluSx1
CAediting_334898	chr3_194506936_+	SINE	Alu	AluSx1
CAediting_334899	chr3_194506940_+	SINE	Alu	AluSx1
CAediting_334900	chr3_194506941_+	SINE	Alu	AluSx1
CAediting_334901	chr3_194506946_+	SINE	Alu	AluSx1
CAediting_334902	chr3_194506954_+	SINE	Alu	AluSx1
CAediting_334903	chr3_194506955_+	SINE	Alu	AluSx1
CAediting_334904	chr3_194506963_+	SINE	Alu	AluSx1
CAediting_334905	chr3_194506969_+	SINE	Alu	AluSx1
CAediting_334906	chr3_194506975_+	SINE	Alu	AluSx1
CAediting_334907	chr3_194508161_+	SINE	Alu	AluSz
CAediting_334908	chr3_194508169_+	SINE	Alu	AluSz
CAediting_334909	chr3_194508223_+	SINE	Alu	AluSz
CAediting_334910	chr3_194508230_+	SINE	Alu	AluSz
CAediting_334911	chr3_194508247_+	SINE	Alu	AluSz
CAediting_334912	chr3_194508256_+	SINE	Alu	AluSz
CAediting_334913	chr3_194508259_+	SINE	Alu	AluSz
CAediting_334914	chr3_194508264_+	SINE	Alu	AluSz
CAediting_334915	chr3_194508291_+	SINE	Alu	AluSz
CAediting_334916	chr3_194508315_+	SINE	Alu	AluSz
CAediting_334917	chr3_194508332_+	SINE	Alu	AluSz
CAediting_334918	chr3_194508367_+	SINE	Alu	AluSz
CAediting_334919	chr3_194509307_+	SINE	Alu	AluJb
CAediting_334920	chr3_194509323_+	SINE	Alu	AluJb
CAediting_334921	chr3_194509363_+	SINE	Alu	AluJb
CAediting_334922	chr3_194509370_+	SINE	Alu	AluJb
CAediting_334923	chr3_194509377_+	SINE	Alu	AluJb
CAediting_334924	chr3_194509383_+	SINE	Alu	AluJb
CAediting_334925	chr3_194509387_+	SINE	Alu	AluJb
CAediting_334926	chr3_194509401_+	SINE	Alu	AluJb
CAediting_334927	chr3_194509402_+	SINE	Alu	AluJb
CAediting_334928	chr3_194509413_+	SINE	Alu	AluJb
CAediting_334929	chr3_194509436_+	SINE	Alu	AluJb
CAediting_334930	chr3_194509449_+	SINE	Alu	AluJb
CAediting_334931	chr3_194509450_+	SINE	Alu	AluJb
CAediting_334932	chr3_194509458_+	SINE	Alu	AluJb
CAediting_334933	chr3_194509467_+	SINE	Alu	AluJb
CAediting_334934	chr3_194509512_+	SINE	Alu	AluJb
CAediting_334935	chr3_194509519_+	SINE	Alu	AluJb
CAediting_334936	chr3_194509520_+	SINE	Alu	AluJb
CAediting_334937	chr3_194509530_+	SINE	Alu	AluJb
CAediting_334938	chr3_194509535_+	SINE	Alu	AluJb
CAediting_334939	chr3_194509544_+	SINE	Alu	AluJb
CAediting_334940	chr3_194509545_+	SINE	Alu	AluJb
CAediting_334941	chr3_194509551_+	SINE	Alu	AluJb
CAediting_334942	chr3_194509552_+	SINE	Alu	AluJb
CAediting_334943	chr3_194509557_+	SINE	Alu	AluJb
CAediting_334944	chr3_194509559_+	SINE	Alu	AluJb
CAediting_334945	chr3_194509563_+	SINE	Alu	AluJb
CAediting_334946	chr3_194509634_+	SINE	Alu	AluJb
CAediting_334947	chr3_194509663_+	SINE	Alu	AluJb
CAediting_334948	chr3_194509696_+	SINE	Alu	AluJb
CAediting_334949	chr3_194509701_+	SINE	Alu	AluJb
CAediting_334950	chr3_194509723_+	SINE	Alu	AluJb
CAediting_334951	chr3_194509839_+	SINE	Alu	AluJb
CAediting_334952	chr3_194509840_+	SINE	Alu	AluJb
CAediting_334953	chr3_194509853_+	SINE	Alu	AluJb
CAediting_334954	chr3_194509854_+	SINE	Alu	AluJb
CAediting_334955	chr3_194509871_+	SINE	Alu	AluJb
CAediting_334956	chr3_194509893_+	SINE	Alu	AluJb
CAediting_334957	chr3_194509896_+	SINE	Alu	AluJb
CAediting_334958	chr3_194509901_+	SINE	Alu	AluJb
CAediting_334959	chr3_194509902_+	SINE	Alu	AluJb
CAediting_334962	chr3_194510515_+	SINE	Alu	FAM
CAediting_334963	chr3_194510525_+	SINE	Alu	FAM
CAediting_334964	chr3_194510538_+	SINE	Alu	FAM
CAediting_334965	chr3_194510542_+	SINE	Alu	FAM
CAediting_334966	chr3_194510556_+	SINE	Alu	FAM
CAediting_334967	chr3_194510561_+	SINE	Alu	FAM
CAediting_334968	chr3_194510564_+	SINE	Alu	FAM
CAediting_334969	chr3_194510603_+	SINE	Alu	FAM
CAediting_334970	chr3_194510618_+	SINE	Alu	FAM
CAediting_334971	chr3_194510631_+	SINE	Alu	FAM
CAediting_334972	chr3_194510648_+	SINE	Alu	FAM
CAediting_334973	chr3_194510650_+	SINE	Alu	FAM
CAediting_334974	chr3_194510653_+	SINE	Alu	FAM
CAediting_334975	chr3_194510796_+	SINE	Alu	AluSx1
CAediting_334976	chr3_194510804_+	SINE	Alu	AluSx1
CAediting_334977	chr3_194510806_+	SINE	Alu	AluSx1
CAediting_334978	chr3_194510812_+	SINE	Alu	AluSx1
CAediting_334979	chr3_194510813_+	SINE	Alu	AluSx1
CAediting_334980	chr3_194510818_+	SINE	Alu	AluSx1
CAediting_334981	chr3_194510821_+	SINE	Alu	AluSx1
CAediting_334982	chr3_194510829_+	SINE	Alu	AluSx1
CAediting_334983	chr3_194510848_+	SINE	Alu	AluSx1
CAediting_334984	chr3_194510858_+	SINE	Alu	AluSx1
CAediting_334985	chr3_194510869_+	SINE	Alu	AluSx1
CAediting_334986	chr3_194510872_+	SINE	Alu	AluSx1
CAediting_334987	chr3_194510889_+	SINE	Alu	AluSx1
CAediting_334988	chr3_194510891_+	SINE	Alu	AluSx1
CAediting_334989	chr3_194510901_+	SINE	Alu	AluSx1
CAediting_334990	chr3_194510902_+	SINE	Alu	AluSx1
CAediting_334991	chr3_194510903_+	SINE	Alu	AluSx1
CAediting_334992	chr3_194510904_+	SINE	Alu	AluSx1
CAediting_334993	chr3_194510906_+	SINE	Alu	AluSx1
CAediting_334994	chr3_194510908_+	SINE	Alu	AluSx1
CAediting_334995	chr3_194510909_+	SINE	Alu	AluSx1
CAediting_334996	chr3_194510910_+	SINE	Alu	AluSx1
CAediting_334997	chr3_194510911_+	SINE	Alu	AluSx1
CAediting_334998	chr3_194510912_+	SINE	Alu	AluSx1
CAediting_334999	chr3_194510913_+	SINE	Alu	AluSx1
CAediting_335000	chr3_194510916_+	SINE	Alu	AluSx1
CAediting_335001	chr3_194510920_+	SINE	Alu	AluSx1
CAediting_335002	chr3_194510921_+	SINE	Alu	AluSx1
CAediting_335003	chr3_194510932_+	SINE	Alu	AluSx1
CAediting_335004	chr3_194510936_+	SINE	Alu	AluSx1
CAediting_335005	chr3_194510942_+	SINE	Alu	AluSx1
CAediting_335006	chr3_194510943_+	SINE	Alu	AluSx1
CAediting_335007	chr3_194510948_+	SINE	Alu	AluSx1
CAediting_335008	chr3_194510951_+	SINE	Alu	AluSx1
CAediting_335009	chr3_194510952_+	SINE	Alu	AluSx1
CAediting_335010	chr3_194510956_+	SINE	Alu	AluSx1
CAediting_335011	chr3_194510959_+	SINE	Alu	AluSx1
CAediting_335012	chr3_194510965_+	SINE	Alu	AluSx1
CAediting_335013	chr3_194510972_+	SINE	Alu	AluSx1
CAediting_335014	chr3_194510975_+	SINE	Alu	AluSx1
CAediting_335015	chr3_194510983_+	SINE	Alu	AluSx1
CAediting_335016	chr3_194510984_+	SINE	Alu	AluSx1
CAediting_335017	chr3_194510995_+	SINE	Alu	AluSx1
CAediting_335018	chr3_194511010_+	SINE	Alu	AluSx1
CAediting_335019	chr3_194511022_+	SINE	Alu	AluSx1
CAediting_335020	chr3_194511025_+	SINE	Alu	AluSx1
CAediting_335021	chr3_194511044_+	SINE	Alu	AluSx1
CAediting_335022	chr3_194511049_+	SINE	Alu	AluSx1
CAediting_335023	chr3_194511858_+	SINE	Alu	AluSz
CAediting_335024	chr3_194512381_+	SINE	Alu	AluJr
CAediting_335025	chr3_194512495_+	SINE	Alu	AluJr
CAediting_335026	chr3_194512503_+	SINE	Alu	AluJr
CAediting_335027	chr3_194512507_+	SINE	Alu	AluJr
CAediting_335028	chr3_194512513_+	SINE	Alu	AluJr
CAediting_335029	chr3_194512549_+	SINE	Alu	AluJr
CAediting_335030	chr3_194512562_+	SINE	Alu	AluJr
CAediting_335031	chr3_194513446_+	SINE	Alu	AluJb
CAediting_335032	chr3_194513493_+	SINE	Alu	AluJb
CAediting_335033	chr3_194513560_+	SINE	Alu	AluJb
CAediting_335034	chr3_194513561_+	SINE	Alu	AluJb
CAediting_335035	chr3_194513575_+	SINE	Alu	AluJb
CAediting_335036	chr3_194513577_+	SINE	Alu	AluJb
CAediting_335037	chr3_194513583_+	SINE	Alu	AluJb
CAediting_335038	chr3_194513591_+	SINE	Alu	AluJb
CAediting_335039	chr3_194513596_+	SINE	Alu	AluJb
CAediting_335040	chr3_194513601_+	SINE	Alu	AluJb
CAediting_335041	chr3_194513606_+	SINE	Alu	AluJb
CAediting_335042	chr3_194513617_+	SINE	Alu	AluJb
CAediting_335043	chr3_194513620_+	SINE	Alu	AluJb
CAediting_335044	chr3_194513632_+	SINE	Alu	AluJb
CAediting_335045	chr3_194513637_+	SINE	Alu	AluJb
CAediting_335046	chr3_194513638_+	SINE	Alu	AluJb
CAediting_335047	chr3_194513639_+	SINE	Alu	AluJb
CAediting_335048	chr3_194513640_+	SINE	Alu	AluJb
CAediting_335049	chr3_194513645_+	SINE	Alu	AluJb
CAediting_335050	chr3_194513660_+	SINE	Alu	AluJb
CAediting_335051	chr3_194513665_+	SINE	Alu	AluJb
CAediting_335052	chr3_194513669_+	SINE	Alu	AluJb
CAediting_335053	chr3_194513673_+	SINE	Alu	AluJb
CAediting_335054	chr3_194513689_+	SINE	Alu	AluJb
CAediting_335055	chr3_194513724_+	SINE	Alu	AluJb
CAediting_335056	chr3_194513730_+	SINE	Alu	AluJb
CAediting_335057	chr3_194513735_+	SINE	Alu	AluJb
CAediting_335058	chr3_194513747_+	SINE	Alu	AluJb
CAediting_335059	chr3_194513764_+	SINE	Alu	AluJb
CAediting_335060	chr3_194513765_+	SINE	Alu	AluJb
CAediting_335061	chr3_194513775_+	SINE	Alu	AluJb
CAediting_335062	chr3_194514579_+	SINE	Alu	AluSq
CAediting_335063	chr3_194515404_+	SINE	MIR	MIR
CAediting_335064	chr3_194518211_+	SINE	Alu	FLAM_C
CAediting_335065	chr3_194518213_+	SINE	Alu	FLAM_C
CAediting_335066	chr3_194518243_+	SINE	Alu	FLAM_C
CAediting_335067	chr3_194518263_+	SINE	Alu	FLAM_C

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RNA A-to-I editing events in the alternative splicing sites for LINC00884

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000233058.1.LINC00884.

Correlation between RNA A-to-I editing and PSI for ENSG00000233058.1.LINC00884.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for LINC00884

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for LINC00884

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for LINC00884

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for LINC00884

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST	ENST type	RNA structure without RNA A-to-I editing.	RNA structure with RNA A-to-I editing.
ENST00000437597.1	antisense
ENST00000448892.1	antisense

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID	ENST	Editing_Position	MFE_withoneAI	MFE_withoutAI	MFE_withmultipleAI
CAediting_334960	ENST00000437597.1	chr3_194510477_+	-159.70	-156.60	-166.70
CAediting_334961	ENST00000437597.1	chr3_194510493_+	-156.80	-156.60	-166.70
CAediting_334962	ENST00000437597.1	chr3_194510515_+	-155.70	-156.60	-166.70
CAediting_334963	ENST00000437597.1	chr3_194510525_+	-156.90	-156.60	-166.70
CAediting_334964	ENST00000437597.1	chr3_194510538_+	-158.70	-156.60	-166.70
CAediting_334965	ENST00000437597.1	chr3_194510542_+	-159.20	-156.60	-166.70
CAediting_334966	ENST00000437597.1	chr3_194510556_+	-157.40	-156.60	-166.70
CAediting_334967	ENST00000437597.1	chr3_194510561_+	-155.30	-156.60	-166.70
CAediting_334968	ENST00000437597.1	chr3_194510564_+	-157.60	-156.60	-166.70
CAediting_334969	ENST00000437597.1	chr3_194510603_+	-156.60	-156.60	-166.70
CAediting_334970	ENST00000437597.1	chr3_194510618_+	-156.30	-156.60	-166.70
CAediting_334971	ENST00000437597.1	chr3_194510631_+	-160.60	-156.60	-166.70
CAediting_335064	ENST00000448892.1	chr3_194518211_+	-907.40	-906.20	-912.30
CAediting_335065	ENST00000448892.1	chr3_194518213_+	-912.80	-906.20	-912.30
CAediting_335066	ENST00000448892.1	chr3_194518243_+	-905.90	-906.20	-912.30
CAediting_335067	ENST00000448892.1	chr3_194518263_+	-905.90	-906.20	-912.30

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Relation with ADAR for LINC00884

Correlation between ADAR gene expression and RNA editing frequency

Cancer	CAeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
OV	CAediting_334980	chr3_194510818_+	0.0130621345398246	0.22415643587745	.	.	.	.
OV	CAediting_335005	chr3_194510942_+	.	.	0.0320052874871204	0.20462417282148	.	.
OV	CAediting_335006	chr3_194510943_+	0.0437378686159597	0.196286519498383	.	.	.	.

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Relation with cancer stages for LINC00884

Correlation between Cancer stages and RNA editing frequency

Cancer	Stage_type	CAeditomID	position	P-val	Coeff.
OV	clinical_stage	CAediting_334993	chr3_194510906_+	0.0181984216608475	0.304016040971932
OV	clinical_stage	CAediting_335002	chr3_194510921_+	0.00433908810760969	0.351999492880476
OV	clinical_stage	CAediting_335006	chr3_194510943_+	0.0314359831369163	0.210131007075694

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Relation with survival for LINC00884

Correlation between RNA editing and survival

Cancer	CAeditomID	position	KMpvalue	Coxpvalue	CoxHR
OV	CAediting_334979	chr3_194510813_+	0.0225481264120906	0.0108642	13.3919

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RelatedDrugs for LINC00884

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for LINC00884

Diseases associated with this gene.
(DisGeNet 7.0)

Gene

Disease ID

Disease name

# pubmeds

Source

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene