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Editing gene: ZNF880 (CAeditome ID:400713)

Gene summary for ZNF880

Gene summary

Gene information	Gene symbol	ZNF880
	Gene ID	400713
	Gene name	zinc finger protein 880
	Synonyms	-
	Cytomap	19q13.41
	Type of gene	protein-coding
	Description	zinc finger protein 880zinc finger protein LOC400713
	Modification date	20210518
	UniProtAcc	Q6PDB4
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene

GO ID

GO term

PubMed ID

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RNA A-to-I events for ZNF880

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000221923.7

RNA A-to-I editing events in Cancer.

CAediting_1381253(52371445, +), CAediting_1381254(52372722, +), CAediting_1381255(52372723, +), CAediting_1381256(52372724, +), CAediting_1381257(52374514, +), CAediting_1381258(52374557, +), CAediting_1381259(52374572, +), CAediting_1381260(52374599, +), CAediting_1381261(52374614, +), CAediting_1381262(52378443, +), CAediting_1381263(52379421, +), CAediting_1381264(52379460, +), CAediting_1381265(52379476, +), CAediting_1381266(52379495, +), CAediting_1381267(52379496, +), CAediting_1381268(52379499, +), CAediting_1381269(52379529, +), CAediting_1381270(52379535, +), CAediting_1381271(52379578, +), CAediting_1381272(52379580, +), CAediting_1381273(52379584, +), CAediting_1381274(52379592, +), CAediting_1381275(52379609, +), CAediting_1381276(52379611, +), CAediting_1381277(52379624, +), CAediting_1381278(52379630, +), CAediting_1381279(52379673, +), CAediting_1381280(52379678, +), CAediting_1381281(52379696, +), CAediting_1381282(52379706, +), CAediting_1381283(52379718, +), CAediting_1381284(52379724, +), CAediting_1381285(52379918, +), CAediting_1381286(52379922, +), CAediting_1381287(52379938, +), CAediting_1381288(52379947, +), CAediting_1381289(52379957, +), CAediting_1381290(52379961, +), CAediting_1381291(52379967, +), CAediting_1381292(52379972, +), CAediting_1381293(52379977, +), CAediting_1381294(52379978, +), CAediting_1381295(52379991, +), CAediting_1381296(52379997, +), CAediting_1381297(52379998, +), CAediting_1381298(52380010, +), CAediting_1381299(52380015, +), CAediting_1381300(52380023, +), CAediting_1381301(52380027, +), CAediting_1381302(52380037, +), CAediting_1381303(52380039, +), CAediting_1381304(52380055, +), CAediting_1381305(52380059, +), CAediting_1381306(52380063, +), CAediting_1381307(52380064, +), CAediting_1381308(52380080, +), CAediting_1381309(52380081, +), CAediting_1381310(52380083, +), CAediting_1381311(52380089, +), CAediting_1381312(52380097, +), CAediting_1381313(52380100, +), CAediting_1381314(52380109, +), CAediting_1381315(52380134, +), CAediting_1381316(52380139, +), CAediting_1381317(52380143, +), CAediting_1381318(52380152, +), CAediting_1381319(52380161, +), CAediting_1381320(52380162, +), CAediting_1381321(52380174, +), CAediting_1381322(52380176, +), CAediting_1381323(52380746, +), CAediting_1381324(52380776, +), CAediting_1381325(52380794, +), CAediting_1381326(52380806, +), CAediting_1381327(52380816, +), CAediting_1381328(52380818, +), CAediting_1381329(52380868, +), CAediting_1381330(52380939, +), CAediting_1381331(52380952, +), CAediting_1381332(52380955, +), CAediting_1381333(52381130, +), CAediting_1381334(52381133, +), CAediting_1381335(52381159, +), CAediting_1381336(52381172, +), CAediting_1381337(52381178, +), CAediting_1381338(52381188, +), CAediting_1381339(52381189, +), CAediting_1381340(52381230, +), CAediting_1381341(52382127, +), CAediting_1381342(52382151, +), CAediting_1381343(52382153, +), CAediting_1381344(52382154, +),

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RNA editing positional annotations for ZNF880 using Annovar

Protein coding RNA editing(s).

CAeditome ID	Position	Variant type	ENST	NTchange	AAchange	SIFT_score	Polyphen2_HVAR_score	PROVEAN_pred
CAediting_1381257	chr19_52374514_+	nonsynonymous SNV	ENST00000344085.8	c.A266G	p.E89G	D	.	N
CAediting_1381266	chr19_52379495_+	nonsynonymous SNV	ENST00000424032.5	c.A343G	p.K115E	D	.	N
CAediting_1381266	chr19_52379495_+	nonsynonymous SNV	ENST00000600321.4	c.A343G	p.K115E	D	.	N
CAediting_1381267	chr19_52379496_+	nonsynonymous SNV	ENST00000424032.5	c.A344G	p.K115R	D	.	N
CAediting_1381267	chr19_52379496_+	nonsynonymous SNV	ENST00000600321.4	c.A344G	p.K115R	D	.	N
CAediting_1381268	chr19_52379499_+	nonsynonymous SNV	ENST00000424032.5	c.A347G	p.Q116R	D	.	N
CAediting_1381268	chr19_52379499_+	nonsynonymous SNV	ENST00000600321.4	c.A347G	p.Q116R	D	.	N

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_1381253	chr19_52371445_+	ncRNA_intronic
CAediting_1381254	chr19_52372722_+	ncRNA_intronic
CAediting_1381255	chr19_52372723_+	ncRNA_intronic
CAediting_1381256	chr19_52372724_+	ncRNA_intronic
CAediting_1381257	chr19_52374514_+	exonic
CAediting_1381258	chr19_52374557_+	UTR3
CAediting_1381259	chr19_52374572_+	UTR3
CAediting_1381260	chr19_52374599_+	UTR3
CAediting_1381261	chr19_52374614_+	UTR3
CAediting_1381262	chr19_52378443_+	intronic
CAediting_1381263	chr19_52379421_+	exonic
CAediting_1381264	chr19_52379460_+	exonic
CAediting_1381265	chr19_52379476_+	exonic
CAediting_1381266	chr19_52379495_+	exonic
CAediting_1381267	chr19_52379496_+	exonic
CAediting_1381268	chr19_52379499_+	exonic
CAediting_1381269	chr19_52379529_+	exonic
CAediting_1381270	chr19_52379535_+	UTR3
CAediting_1381271	chr19_52379578_+	UTR3
CAediting_1381272	chr19_52379580_+	UTR3
CAediting_1381273	chr19_52379584_+	UTR3
CAediting_1381274	chr19_52379592_+	UTR3
CAediting_1381275	chr19_52379609_+	UTR3
CAediting_1381276	chr19_52379611_+	UTR3
CAediting_1381277	chr19_52379624_+	UTR3
CAediting_1381278	chr19_52379630_+	UTR3
CAediting_1381279	chr19_52379673_+	UTR3
CAediting_1381280	chr19_52379678_+	UTR3
CAediting_1381281	chr19_52379696_+	UTR3
CAediting_1381282	chr19_52379706_+	UTR3
CAediting_1381283	chr19_52379718_+	UTR3
CAediting_1381284	chr19_52379724_+	UTR3
CAediting_1381285	chr19_52379918_+	UTR3
CAediting_1381286	chr19_52379922_+	UTR3
CAediting_1381287	chr19_52379938_+	UTR3
CAediting_1381288	chr19_52379947_+	UTR3
CAediting_1381289	chr19_52379957_+	UTR3
CAediting_1381290	chr19_52379961_+	UTR3
CAediting_1381291	chr19_52379967_+	UTR3
CAediting_1381292	chr19_52379972_+	UTR3
CAediting_1381293	chr19_52379977_+	UTR3
CAediting_1381294	chr19_52379978_+	UTR3
CAediting_1381295	chr19_52379991_+	UTR3
CAediting_1381296	chr19_52379997_+	UTR3
CAediting_1381297	chr19_52379998_+	UTR3
CAediting_1381298	chr19_52380010_+	UTR3
CAediting_1381299	chr19_52380015_+	UTR3
CAediting_1381300	chr19_52380023_+	UTR3
CAediting_1381301	chr19_52380027_+	UTR3
CAediting_1381302	chr19_52380037_+	UTR3
CAediting_1381303	chr19_52380039_+	UTR3
CAediting_1381304	chr19_52380055_+	UTR3
CAediting_1381305	chr19_52380059_+	UTR3
CAediting_1381306	chr19_52380063_+	UTR3
CAediting_1381307	chr19_52380064_+	UTR3
CAediting_1381308	chr19_52380080_+	intronic
CAediting_1381309	chr19_52380081_+	intronic
CAediting_1381310	chr19_52380083_+	intronic
CAediting_1381311	chr19_52380089_+	intronic
CAediting_1381312	chr19_52380097_+	intronic
CAediting_1381313	chr19_52380100_+	intronic
CAediting_1381314	chr19_52380109_+	intronic
CAediting_1381315	chr19_52380134_+	intronic
CAediting_1381316	chr19_52380139_+	intronic
CAediting_1381317	chr19_52380143_+	intronic
CAediting_1381318	chr19_52380152_+	intronic
CAediting_1381319	chr19_52380161_+	intronic
CAediting_1381320	chr19_52380162_+	intronic
CAediting_1381321	chr19_52380174_+	intronic
CAediting_1381322	chr19_52380176_+	intronic
CAediting_1381323	chr19_52380746_+	intronic
CAediting_1381324	chr19_52380776_+	intronic
CAediting_1381325	chr19_52380794_+	intronic
CAediting_1381326	chr19_52380806_+	intronic
CAediting_1381327	chr19_52380816_+	intronic
CAediting_1381328	chr19_52380818_+	intronic
CAediting_1381329	chr19_52380868_+	intronic
CAediting_1381330	chr19_52380939_+	intronic
CAediting_1381331	chr19_52380952_+	intronic
CAediting_1381332	chr19_52380955_+	intronic
CAediting_1381333	chr19_52381130_+	intronic
CAediting_1381334	chr19_52381133_+	intronic
CAediting_1381335	chr19_52381159_+	intronic
CAediting_1381336	chr19_52381172_+	intronic
CAediting_1381337	chr19_52381178_+	intronic
CAediting_1381338	chr19_52381188_+	intronic
CAediting_1381339	chr19_52381189_+	intronic
CAediting_1381340	chr19_52381230_+	intronic
CAediting_1381341	chr19_52382127_+	intronic
CAediting_1381342	chr19_52382151_+	intronic
CAediting_1381343	chr19_52382153_+	intronic
CAediting_1381344	chr19_52382154_+	intronic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_1381253	chr19_52371445_+	SINE	Alu	AluSx1
CAediting_1381254	chr19_52372722_+	SINE	Alu	AluY
CAediting_1381255	chr19_52372723_+	SINE	Alu	AluY
CAediting_1381256	chr19_52372724_+	SINE	Alu	AluY
CAediting_1381257	chr19_52374514_+	SINE	Alu	AluJo
CAediting_1381258	chr19_52374557_+	SINE	Alu	AluJo
CAediting_1381259	chr19_52374572_+	SINE	Alu	AluJo
CAediting_1381260	chr19_52374599_+	SINE	Alu	AluJo
CAediting_1381261	chr19_52374614_+	SINE	Alu	AluJo
CAediting_1381262	chr19_52378443_+	SINE	Alu	AluSc
CAediting_1381263	chr19_52379421_+	SINE	Alu	AluSx
CAediting_1381264	chr19_52379460_+	SINE	Alu	AluSx
CAediting_1381265	chr19_52379476_+	SINE	Alu	AluSx
CAediting_1381266	chr19_52379495_+	SINE	Alu	AluSx
CAediting_1381267	chr19_52379496_+	SINE	Alu	AluSx
CAediting_1381268	chr19_52379499_+	SINE	Alu	AluSx
CAediting_1381269	chr19_52379529_+	SINE	Alu	AluSx
CAediting_1381270	chr19_52379535_+	SINE	Alu	AluSx
CAediting_1381271	chr19_52379578_+	SINE	Alu	AluSx
CAediting_1381272	chr19_52379580_+	SINE	Alu	AluSx
CAediting_1381273	chr19_52379584_+	SINE	Alu	AluSx
CAediting_1381274	chr19_52379592_+	SINE	Alu	AluSx
CAediting_1381275	chr19_52379609_+	SINE	Alu	AluSx
CAediting_1381276	chr19_52379611_+	SINE	Alu	AluSx
CAediting_1381277	chr19_52379624_+	SINE	Alu	AluSx
CAediting_1381278	chr19_52379630_+	SINE	Alu	AluSx
CAediting_1381279	chr19_52379673_+	SINE	Alu	AluSx
CAediting_1381280	chr19_52379678_+	SINE	Alu	AluSx
CAediting_1381281	chr19_52379696_+	SINE	Alu	AluSx
CAediting_1381282	chr19_52379706_+	SINE	Alu	AluSx
CAediting_1381283	chr19_52379718_+	SINE	Alu	AluSx
CAediting_1381284	chr19_52379724_+	SINE	Alu	AluSx
CAediting_1381285	chr19_52379918_+	SINE	Alu	AluSz6
CAediting_1381286	chr19_52379922_+	SINE	Alu	AluSz6
CAediting_1381287	chr19_52379938_+	SINE	Alu	AluSz6
CAediting_1381288	chr19_52379947_+	SINE	Alu	AluSz6
CAediting_1381289	chr19_52379957_+	SINE	Alu	AluSz6
CAediting_1381290	chr19_52379961_+	SINE	Alu	AluSz6
CAediting_1381291	chr19_52379967_+	SINE	Alu	AluSz6
CAediting_1381292	chr19_52379972_+	SINE	Alu	AluSz6
CAediting_1381293	chr19_52379977_+	SINE	Alu	AluSz6
CAediting_1381294	chr19_52379978_+	SINE	Alu	AluSz6
CAediting_1381295	chr19_52379991_+	SINE	Alu	AluSz6
CAediting_1381296	chr19_52379997_+	SINE	Alu	AluSz6
CAediting_1381297	chr19_52379998_+	SINE	Alu	AluSz6
CAediting_1381298	chr19_52380010_+	SINE	Alu	AluSz6
CAediting_1381299	chr19_52380015_+	SINE	Alu	AluSz6
CAediting_1381300	chr19_52380023_+	SINE	Alu	AluSz6
CAediting_1381301	chr19_52380027_+	SINE	Alu	AluSz6
CAediting_1381302	chr19_52380037_+	SINE	Alu	AluSz6
CAediting_1381303	chr19_52380039_+	SINE	Alu	AluSz6
CAediting_1381304	chr19_52380055_+	SINE	Alu	AluSz6
CAediting_1381305	chr19_52380059_+	SINE	Alu	AluSz6
CAediting_1381306	chr19_52380063_+	SINE	Alu	AluSz6
CAediting_1381307	chr19_52380064_+	SINE	Alu	AluSz6
CAediting_1381308	chr19_52380080_+	SINE	Alu	AluSz6
CAediting_1381309	chr19_52380081_+	SINE	Alu	AluSz6
CAediting_1381310	chr19_52380083_+	SINE	Alu	AluSz6
CAediting_1381311	chr19_52380089_+	SINE	Alu	AluSz6
CAediting_1381312	chr19_52380097_+	SINE	Alu	AluSz6
CAediting_1381313	chr19_52380100_+	SINE	Alu	AluSz6
CAediting_1381314	chr19_52380109_+	SINE	Alu	AluSz6
CAediting_1381315	chr19_52380134_+	SINE	Alu	AluSz6
CAediting_1381316	chr19_52380139_+	SINE	Alu	AluSz6
CAediting_1381317	chr19_52380143_+	SINE	Alu	AluSz6
CAediting_1381318	chr19_52380152_+	SINE	Alu	AluSz6
CAediting_1381319	chr19_52380161_+	SINE	Alu	AluSz6
CAediting_1381320	chr19_52380162_+	SINE	Alu	AluSz6
CAediting_1381321	chr19_52380174_+	SINE	Alu	AluSz6
CAediting_1381322	chr19_52380176_+	SINE	Alu	AluSz6
CAediting_1381323	chr19_52380746_+	SINE	Alu	AluJo
CAediting_1381324	chr19_52380776_+	SINE	Alu	AluJo
CAediting_1381325	chr19_52380794_+	SINE	Alu	AluJo
CAediting_1381326	chr19_52380806_+	SINE	Alu	AluJo
CAediting_1381327	chr19_52380816_+	SINE	Alu	AluJo
CAediting_1381328	chr19_52380818_+	SINE	Alu	AluJo
CAediting_1381329	chr19_52380868_+	SINE	Alu	AluJo
CAediting_1381330	chr19_52380939_+	SINE	Alu	AluJo
CAediting_1381331	chr19_52380952_+	SINE	Alu	AluJo
CAediting_1381332	chr19_52380955_+	SINE	Alu	AluJo
CAediting_1381333	chr19_52381130_+	SINE	Alu	AluJo
CAediting_1381334	chr19_52381133_+	SINE	Alu	AluJo
CAediting_1381335	chr19_52381159_+	SINE	Alu	AluJo
CAediting_1381336	chr19_52381172_+	SINE	Alu	AluJo
CAediting_1381337	chr19_52381178_+	SINE	Alu	AluJo
CAediting_1381338	chr19_52381188_+	SINE	Alu	AluJo
CAediting_1381339	chr19_52381189_+	SINE	Alu	AluJo
CAediting_1381340	chr19_52381230_+	SINE	Alu	AluJo
CAediting_1381341	chr19_52382127_+	SINE	Alu	AluSx
CAediting_1381342	chr19_52382151_+	SINE	Alu	AluSx
CAediting_1381343	chr19_52382153_+	SINE	Alu	AluSx
CAediting_1381344	chr19_52382154_+	SINE	Alu	AluSx

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RNA A-to-I editing events in the alternative splicing sites for ZNF880

RNA A-to-I editing(s) in the alternative splicing sites.

AStype	CAeditomID	Editing position	AS position	AS direction	Exonic location	Wildtype sequence	Wildtype splicing strength	RNA edited sequence	RNA edited splicing strength
IR	CAediting_1381257	chr19_52374514_+	52374493:52374515	3SS	2+0i	CTGTCACCCAGGCTGTCGTAGAG	-23.17	CTGTCACCCAGGCTGTCGTAGGG	-28.76
ES	CAediting_1381263	chr19_52379421_+	52379400:52379422	3SS	2+0i	TTCTTTTTTTTTTTTTGATAGAG	-8.51	TTCTTTTTTTTTTTTTGATAGGG	-8.57
ES	CAediting_1381280	chr19_52379678_+	52379677:52379685	5SS	2+0i	CAGGTGATC	4.28	CGGGTGATC	1.21

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000221923.7.ZNF880.

Correlation between RNA A-to-I editing and PSI for ENSG00000221923.7.ZNF880.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for ZNF880

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for ZNF880

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for ZNF880

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1381273	chr19_52379584_+	ENSG00000221923.7	ENST00000600321	hsa-miR-340-3p	52379578	52379584	7mer-m8	52379563	52379585	147.00	-15.89
CAediting_1381273	chr19_52379584_+	ENSG00000221923.7	ENST00000600321	hsa-miR-6827-3p	52379578	52379584	7mer-m8	52379565	52379585	145.00	-16.55
CAediting_1381286	chr19_52379922_+	ENSG00000221923.7	ENST00000600321	hsa-miR-340-3p	52379916	52379922	7mer-m8	52379901	52379923	145.00	-16.24
CAediting_1381286	chr19_52379922_+	ENSG00000221923.7	ENST00000600321	hsa-miR-6827-3p	52379916	52379922	7mer-m8	52379903	52379923	140.00	-14.37
CAediting_1381287	chr19_52379938_+	ENSG00000221923.7	ENST00000600321	hsa-miR-1273c	52379933	52379938	6mer	52379918	52379939	148.00	-33.17
CAediting_1381287	chr19_52379938_+	ENSG00000221923.7	ENST00000600321	hsa-miR-1285-3p	52379937	52379942	6mer	52379922	52379943	156.00	-32.76
CAediting_1381287	chr19_52379938_+	ENSG00000221923.7	ENST00000600321	hsa-miR-1285-3p	52379937	52379942	6mer	52379922	52379943	156.00	-32.76
CAediting_1381287	chr19_52379938_+	ENSG00000221923.7	ENST00000600321	hsa-miR-4486	52379936	52379942	7mer-m8	52379925	52379943	146.00	-18.52
CAediting_1381297	chr19_52379998_+	ENSG00000221923.7	ENST00000600321	hsa-miR-3622a-3p	52379994	52380001	8mer-1a	52379979	52380001	146.00	-18.21
CAediting_1381297	chr19_52379998_+	ENSG00000221923.7	ENST00000600321	hsa-miR-3622b-3p	52379994	52380001	8mer-1a	52379981	52380001	147.00	-18.77
CAediting_1381297	chr19_52379998_+	ENSG00000221923.7	ENST00000600321	hsa-miR-4539	52379992	52379997	6mer	52379979	52379998	141.00	-20.99
CAediting_1381261	chr19_52374614_+	ENSG00000221923.7	ENST00000344085	hsa-miR-6514-3p	52374610	52374616	7mer-m8	52374597	52374617	163.00	-21.90
CAediting_1381261	chr19_52374614_+	ENSG00000221923.7	ENST00000597976	hsa-miR-6514-3p	52374610	52374616	7mer-m8	52374597	52374617	163.00	-21.90
CAediting_1381271	chr19_52379578_+	ENSG00000221923.7	ENST00000600321	hsa-miR-3613-3p	52379571	52379577	7mer-m8	52379553	52379578	148.00	-5.27
CAediting_1381271	chr19_52379578_+	ENSG00000221923.7	ENST00000600321	hsa-miR-515-5p	52379575	52379581	7mer-m8	52379559	52379582	161.00	-13.85
CAediting_1381271	chr19_52379578_+	ENSG00000221923.7	ENST00000600321	hsa-miR-515-5p	52379575	52379581	7mer-m8	52379559	52379582	161.00	-13.85
CAediting_1381271	chr19_52379578_+	ENSG00000221923.7	ENST00000600321	hsa-miR-519d-5p	52379574	52379581	8mer-1a	52379557	52379581	148.00	-12.06
CAediting_1381271	chr19_52379578_+	ENSG00000221923.7	ENST00000600321	hsa-miR-519e-5p	52379575	52379581	7mer-m8	52379561	52379582	153.00	-13.79
CAediting_1381271	chr19_52379578_+	ENSG00000221923.7	ENST00000600321	hsa-miR-5695	52379575	52379581	7mer-1a	52379560	52379581	147.00	-13.28
CAediting_1381275	chr19_52379609_+	ENSG00000221923.7	ENST00000600321	hsa-miR-5586-5p	52379605	52379611	7mer-m8	52379591	52379612	151.00	-17.61
CAediting_1381275	chr19_52379609_+	ENSG00000221923.7	ENST00000600321	hsa-miR-6512-3p	52379604	52379610	7mer-m8	52379590	52379611	140.00	-17.60
CAediting_1381275	chr19_52379609_+	ENSG00000221923.7	ENST00000600321	hsa-miR-6720-5p	52379604	52379610	7mer-m8	52379589	52379611	155.00	-23.04
CAediting_1381275	chr19_52379609_+	ENSG00000221923.7	ENST00000600321	hsa-miR-6849-3p	52379603	52379610	8mer-1a	52379589	52379610	148.00	-18.13
CAediting_1381276	chr19_52379611_+	ENSG00000221923.7	ENST00000600321	hsa-miR-4715-3p	52379609	52379615	7mer-m8	52379592	52379616	158.00	-24.13
CAediting_1381277	chr19_52379624_+	ENSG00000221923.7	ENST00000600321	hsa-miR-548at-3p	52379622	52379629	8mer-1a	52379610	52379629	154.00	-14.76
CAediting_1381277	chr19_52379624_+	ENSG00000221923.7	ENST00000600321	hsa-miR-548ay-3p	52379622	52379629	8mer-1a	52379609	52379629	158.00	-17.05
CAediting_1381278	chr19_52379630_+	ENSG00000221923.7	ENST00000600321	hsa-miR-1323	52379623	52379629	7mer-m8	52379605	52379630	146.00	-17.56
CAediting_1381278	chr19_52379630_+	ENSG00000221923.7	ENST00000600321	hsa-miR-551a	52379628	52379634	7mer-m8	52379615	52379635	142.00	-21.15
CAediting_1381278	chr19_52379630_+	ENSG00000221923.7	ENST00000600321	hsa-miR-551b-3p	52379628	52379634	7mer-m8	52379615	52379635	150.00	-20.89
CAediting_1381282	chr19_52379706_+	ENSG00000221923.7	ENST00000600321	hsa-miR-3189-3p	52379700	52379706	7mer-m8	52379684	52379707	157.00	-25.36
CAediting_1381282	chr19_52379706_+	ENSG00000221923.7	ENST00000600321	hsa-miR-6813-3p	52379701	52379707	7mer-m8	52379688	52379708	140.00	-12.13
CAediting_1381284	chr19_52379724_+	ENSG00000221923.7	ENST00000600321	hsa-miR-4798-3p	52379722	52379728	7mer-m8	52379705	52379729	149.00	-19.15
CAediting_1381288	chr19_52379947_+	ENSG00000221923.7	ENST00000600321	hsa-miR-4793-5p	52379940	52379946	7mer-m8	52379924	52379947	154.00	-22.09
CAediting_1381291	chr19_52379967_+	ENSG00000221923.7	ENST00000600321	hsa-miR-4523	52379962	52379968	7mer-m8	52379949	52379969	140.00	-17.58
CAediting_1381294	chr19_52379978_+	ENSG00000221923.7	ENST00000600321	hsa-miR-485-5p	52379975	52379981	7mer-m8	52379959	52379982	156.00	-17.68
CAediting_1381294	chr19_52379978_+	ENSG00000221923.7	ENST00000600321	hsa-miR-604	52379974	52379979	6mer	52379960	52379980	140.00	-20.53
CAediting_1381294	chr19_52379978_+	ENSG00000221923.7	ENST00000600321	hsa-miR-6884-5p	52379975	52379981	7mer-m8	52379959	52379982	150.00	-21.70
CAediting_1381295	chr19_52379991_+	ENSG00000221923.7	ENST00000600321	hsa-miR-1247-3p	52379986	52379992	7mer-m8	52379971	52379993	154.00	-26.98
CAediting_1381300	chr19_52380023_+	ENSG00000221923.7	ENST00000600321	hsa-miR-6771-5p	52380017	52380023	7mer-m8	52380003	52380024	148.00	-29.41
CAediting_1381301	chr19_52380027_+	ENSG00000221923.7	ENST00000600321	hsa-miR-3614-5p	52380020	52380026	7mer-m8	52380005	52380027	147.00	-24.19
CAediting_1381301	chr19_52380027_+	ENSG00000221923.7	ENST00000600321	hsa-miR-4691-3p	52380024	52380030	7mer-m8	52380005	52380031	157.00	-32.00
CAediting_1381304	chr19_52380055_+	ENSG00000221923.7	ENST00000600321	hsa-miR-3622b-5p	52380050	52380056	7mer-m8	52380038	52380057	151.00	-22.36
CAediting_1381304	chr19_52380055_+	ENSG00000221923.7	ENST00000600321	hsa-miR-4253	52380051	52380058	8mer-1a	52380041	52380058	140.00	-16.86
CAediting_1381304	chr19_52380055_+	ENSG00000221923.7	ENST00000600321	hsa-miR-6862-5p	52380051	52380058	8mer-1a	52380036	52380058	151.00	-18.20
CAediting_1381304	chr19_52380055_+	ENSG00000221923.7	ENST00000600321	hsa-miR-6862-5p	52380051	52380058	8mer-1a	52380036	52380058	151.00	-18.20
CAediting_1381305	chr19_52380059_+	ENSG00000221923.7	ENST00000600321	hsa-miR-137-5p	52380052	52380058	7mer-m8	52380037	52380059	140.00	-18.60
CAediting_1381305	chr19_52380059_+	ENSG00000221923.7	ENST00000600321	hsa-miR-483-5p	52380055	52380062	8mer-1a	52380040	52380062	144.00	-17.05
CAediting_1381307	chr19_52380064_+	ENSG00000221923.7	ENST00000600321	hsa-miR-28-3p	52380058	52380064	7mer-m8	52380044	52380065	142.00	-10.10
CAediting_1381307	chr19_52380064_+	ENSG00000221923.7	ENST00000600321	hsa-miR-548ae-3p	52380062	52380068	7mer-m8	52380049	52380069	143.00	-8.88
CAediting_1381307	chr19_52380064_+	ENSG00000221923.7	ENST00000600321	hsa-miR-548ae-3p	52380062	52380068	7mer-m8	52380049	52380069	143.00	-8.88
CAediting_1381307	chr19_52380064_+	ENSG00000221923.7	ENST00000600321	hsa-miR-548ah-3p	52380062	52380068	7mer-m8	52380048	52380069	143.00	-9.68
CAediting_1381307	chr19_52380064_+	ENSG00000221923.7	ENST00000600321	hsa-miR-548aj-3p	52380062	52380068	7mer-m8	52380049	52380069	143.00	-6.77
CAediting_1381307	chr19_52380064_+	ENSG00000221923.7	ENST00000600321	hsa-miR-548aj-3p	52380062	52380068	7mer-m8	52380049	52380069	143.00	-6.77
CAediting_1381307	chr19_52380064_+	ENSG00000221923.7	ENST00000600321	hsa-miR-548am-3p	52380062	52380068	7mer-m8	52380048	52380069	143.00	-8.95
CAediting_1381307	chr19_52380064_+	ENSG00000221923.7	ENST00000600321	hsa-miR-548aq-3p	52380062	52380068	7mer-m8	52380048	52380069	143.00	-9.11
CAediting_1381307	chr19_52380064_+	ENSG00000221923.7	ENST00000600321	hsa-miR-548j-3p	52380062	52380068	7mer-m8	52380049	52380069	148.00	-8.97
CAediting_1381307	chr19_52380064_+	ENSG00000221923.7	ENST00000600321	hsa-miR-548x-3p	52380062	52380068	7mer-m8	52380050	52380069	143.00	-6.77
CAediting_1381307	chr19_52380064_+	ENSG00000221923.7	ENST00000600321	hsa-miR-548x-3p	52380062	52380068	7mer-m8	52380050	52380069	143.00	-6.77
CAediting_1381307	chr19_52380064_+	ENSG00000221923.7	ENST00000600321	hsa-miR-708-3p	52380059	52380065	7mer-m8	52380046	52380066	143.00	-9.23
CAediting_1381307	chr19_52380064_+	ENSG00000221923.7	ENST00000600321	hsa-miR-7844-5p	52380060	52380066	7mer-m8	52380046	52380067	160.00	-18.67
CAediting_1381259	chr19_52374572_+	ENSG00000221923.7	ENST00000344085	hsa-miR-3622a-3p	52374568	52374575	8mer-1a	52374554	52374575	140.00	-16.04
CAediting_1381259	chr19_52374572_+	ENSG00000221923.7	ENST00000344085	hsa-miR-3622b-3p	52374568	52374575	8mer-1a	52374555	52374575	149.00	-20.42
CAediting_1381259	chr19_52374572_+	ENSG00000221923.7	ENST00000344085	hsa-miR-4324	52374566	52374572	7mer-m8	52374554	52374573	150.00	-17.07
CAediting_1381259	chr19_52374572_+	ENSG00000221923.7	ENST00000344085	hsa-miR-4329	52374565	52374571	7mer-m8	52374553	52374572	150.00	-21.13
CAediting_1381259	chr19_52374572_+	ENSG00000221923.7	ENST00000597976	hsa-miR-3622a-3p	52374568	52374575	8mer-1a	52374554	52374575	140.00	-16.04
CAediting_1381259	chr19_52374572_+	ENSG00000221923.7	ENST00000597976	hsa-miR-3622b-3p	52374568	52374575	8mer-1a	52374555	52374575	149.00	-20.42
CAediting_1381259	chr19_52374572_+	ENSG00000221923.7	ENST00000597976	hsa-miR-4324	52374566	52374572	7mer-m8	52374554	52374573	150.00	-17.07
CAediting_1381259	chr19_52374572_+	ENSG00000221923.7	ENST00000597976	hsa-miR-4329	52374565	52374571	7mer-m8	52374553	52374572	150.00	-21.13
CAediting_1381298	chr19_52380010_+	ENSG00000221923.7	ENST00000600321	hsa-miR-3622a-5p	52380007	52380012	6mer	52379993	52380013	146.00	-23.43
CAediting_1381298	chr19_52380010_+	ENSG00000221923.7	ENST00000600321	hsa-miR-5582-5p	52380006	52380012	7mer-m8	52379995	52380013	143.00	-11.86

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1381286	chr19_52379922_+	ENSG00000221923.7	ENST00000600321	hsa-miR-10a-5p	52379919	52379925	7mer-m8	52379906	52379926	144	-15.84
CAediting_1381273	chr19_52379584_+	ENSG00000221923.7	ENST00000600321	hsa-miR-10a-5p	52379581	52379587	7mer-m8	52379568	52379588	142	-13.67
CAediting_1381286	chr19_52379922_+	ENSG00000221923.7	ENST00000600321	hsa-miR-10b-5p	52379919	52379925	7mer-m8	52379902	52379926	145	-15.82
CAediting_1381273	chr19_52379584_+	ENSG00000221923.7	ENST00000600321	hsa-miR-10b-5p	52379581	52379587	7mer-m8	52379564	52379588	146	-12.68
CAediting_1381300	chr19_52380023_+	ENSG00000221923.7	ENST00000600321	hsa-miR-12126	52380019	52380026	8mer-1a	52380003	52380026	147	-13
CAediting_1381287	chr19_52379938_+	ENSG00000221923.7	ENST00000600321	hsa-miR-1262	52379935	52379941	7mer-m8	52379921	52379942	146	-16.51
CAediting_1381295	chr19_52379991_+	ENSG00000221923.7	ENST00000600321	hsa-miR-1273h-5p	52379985	52379990	6mer	52379971	52379991	151	-30.09
CAediting_1381275	chr19_52379609_+	ENSG00000221923.7	ENST00000600321	hsa-miR-1287-3p	52379604	52379610	7mer-m8	52379590	52379611	152	-16.96
CAediting_1381276	chr19_52379611_+	ENSG00000221923.7	ENST00000600321	hsa-miR-1287-3p	52379604	52379610	7mer-m8	52379590	52379611	152	-16.96
CAediting_1381291	chr19_52379967_+	ENSG00000221923.7	ENST00000600321	hsa-miR-203b-3p	52379965	52379971	7mer-m8	52379947	52379972	150	-14.12
CAediting_1381292	chr19_52379972_+	ENSG00000221923.7	ENST00000600321	hsa-miR-203b-3p	52379965	52379971	7mer-m8	52379947	52379972	150	-14.12
CAediting_1381279	chr19_52379673_+	ENSG00000221923.7	ENST00000600321	hsa-miR-204-3p	52379667	52379673	7mer-m8	52379653	52379674	151	-21.01
CAediting_1381295	chr19_52379991_+	ENSG00000221923.7	ENST00000600321	hsa-miR-30b-3p	52379985	52379990	6mer	52379970	52379991	152	-26.17
CAediting_1381277	chr19_52379624_+	ENSG00000221923.7	ENST00000600321	hsa-miR-3130-3p	52379618	52379624	7mer-m8	52379605	52379625	142	-19.65
CAediting_1381277	chr19_52379624_+	ENSG00000221923.7	ENST00000600321	hsa-miR-3130-3p	52379618	52379624	7mer-m8	52379605	52379625	142	-19.65
CAediting_1381286	chr19_52379922_+	ENSG00000221923.7	ENST00000600321	hsa-miR-339-5p	52379918	52379924	7mer-m8	52379904	52379925	150	-16.3
CAediting_1381273	chr19_52379584_+	ENSG00000221923.7	ENST00000600321	hsa-miR-339-5p	52379580	52379586	7mer-m8	52379564	52379587	152	-18.05
CAediting_1381296	chr19_52379997_+	ENSG00000221923.7	ENST00000600321	hsa-miR-3614-5p	52379995	52380001	7mer-1a	52379978	52380001	151	-22.47
CAediting_1381297	chr19_52379998_+	ENSG00000221923.7	ENST00000600321	hsa-miR-3614-5p	52379995	52380001	7mer-1a	52379978	52380001	151	-22.47
CAediting_1381280	chr19_52379678_+	ENSG00000221923.7	ENST00000600321	hsa-miR-3622a-3p	52379675	52379682	8mer-1a	52379661	52379682	147	-14.49
CAediting_1381280	chr19_52379678_+	ENSG00000221923.7	ENST00000600321	hsa-miR-3622b-3p	52379675	52379682	8mer-1a	52379662	52379682	155	-20.76
CAediting_1381300	chr19_52380023_+	ENSG00000221923.7	ENST00000600321	hsa-miR-3689a-3p	52380016	52380023	8mer-1a	52380001	52380023	151	-17.3
CAediting_1381295	chr19_52379991_+	ENSG00000221923.7	ENST00000600321	hsa-miR-3689b-3p	52379985	52379990	6mer	52379971	52379991	142	-26.09
CAediting_1381300	chr19_52380023_+	ENSG00000221923.7	ENST00000600321	hsa-miR-3689b-3p	52380016	52380023	8mer-1a	52380001	52380023	151	-17.09
CAediting_1381295	chr19_52379991_+	ENSG00000221923.7	ENST00000600321	hsa-miR-3689c	52379985	52379990	6mer	52379971	52379991	142	-26.09
CAediting_1381300	chr19_52380023_+	ENSG00000221923.7	ENST00000600321	hsa-miR-3689c	52380016	52380023	8mer-1a	52380001	52380023	151	-17.09
CAediting_1381293	chr19_52379977_+	ENSG00000221923.7	ENST00000600321	hsa-miR-377-5p	52379975	52379981	7mer-m8	52379965	52379982	151	-20.43
CAediting_1381294	chr19_52379978_+	ENSG00000221923.7	ENST00000600321	hsa-miR-377-5p	52379975	52379981	7mer-m8	52379965	52379982	151	-20.43
CAediting_1381299	chr19_52380015_+	ENSG00000221923.7	ENST00000600321	hsa-miR-3929	52380012	52380018	7mer-m8	52379997	52380019	153	-23.81
CAediting_1381281	chr19_52379696_+	ENSG00000221923.7	ENST00000600321	hsa-miR-4478	52379693	52379699	7mer-m8	52379684	52379700	150	-23.73
CAediting_1381299	chr19_52380015_+	ENSG00000221923.7	ENST00000600321	hsa-miR-4478	52380012	52380018	7mer-m8	52380002	52380019	150	-20.62
CAediting_1381281	chr19_52379696_+	ENSG00000221923.7	ENST00000600321	hsa-miR-4649-3p	52379690	52379696	7mer-m8	52379675	52379697	145	-16.41
CAediting_1381287	chr19_52379938_+	ENSG00000221923.7	ENST00000600321	hsa-miR-4701-3p	52379935	52379941	7mer-m8	52379924	52379942	155	-21.06
CAediting_1381281	chr19_52379696_+	ENSG00000221923.7	ENST00000600321	hsa-miR-485-5p	52379694	52379700	7mer-m8	52379680	52379701	153	-16.79
CAediting_1381299	chr19_52380015_+	ENSG00000221923.7	ENST00000600321	hsa-miR-485-5p	52380013	52380019	7mer-m8	52379999	52380020	153	-19.19
CAediting_1381295	chr19_52379991_+	ENSG00000221923.7	ENST00000600321	hsa-miR-490-3p	52379988	52379994	7mer-m8	52379974	52379995	153	-16.86
CAediting_1381290	chr19_52379961_+	ENSG00000221923.7	ENST00000600321	hsa-miR-508-3p	52379957	52379963	7mer-m8	52379941	52379964	142	-11.31
CAediting_1381290	chr19_52379961_+	ENSG00000221923.7	ENST00000600321	hsa-miR-5186	52379959	52379966	8mer-1a	52379947	52379966	144	-10.93
CAediting_1381271	chr19_52379578_+	ENSG00000221923.7	ENST00000600321	hsa-miR-520f-5p	52379574	52379581	8mer-1a	52379560	52379581	148	-10.04
CAediting_1381272	chr19_52379580_+	ENSG00000221923.7	ENST00000600321	hsa-miR-520f-5p	52379574	52379581	8mer-1a	52379560	52379581	148	-10.04
CAediting_1381277	chr19_52379624_+	ENSG00000221923.7	ENST00000600321	hsa-miR-548a-3p	52379622	52379629	8mer-1a	52379607	52379629	151	-11.66
CAediting_1381277	chr19_52379624_+	ENSG00000221923.7	ENST00000600321	hsa-miR-548a-3p	52379622	52379629	8mer-1a	52379607	52379629	151	-11.66
CAediting_1381277	chr19_52379624_+	ENSG00000221923.7	ENST00000600321	hsa-miR-548a-3p	52379622	52379629	8mer-1a	52379607	52379629	151	-11.66
CAediting_1381277	chr19_52379624_+	ENSG00000221923.7	ENST00000600321	hsa-miR-548ar-3p	52379622	52379629	8mer-1a	52379610	52379629	154	-16.38
CAediting_1381277	chr19_52379624_+	ENSG00000221923.7	ENST00000600321	hsa-miR-548av-3p	52379621	52379627	7mer-m8	52379610	52379628	153	-15
CAediting_1381277	chr19_52379624_+	ENSG00000221923.7	ENST00000600321	hsa-miR-548bc	52379622	52379629	8mer-1a	52379610	52379629	154	-12.62
CAediting_1381277	chr19_52379624_+	ENSG00000221923.7	ENST00000600321	hsa-miR-548e-3p	52379622	52379629	8mer-1a	52379609	52379629	154	-14.64
CAediting_1381277	chr19_52379624_+	ENSG00000221923.7	ENST00000600321	hsa-miR-548f-3p	52379622	52379629	8mer-1a	52379612	52379629	154	-12.45
CAediting_1381277	chr19_52379624_+	ENSG00000221923.7	ENST00000600321	hsa-miR-548f-3p	52379622	52379629	8mer-1a	52379612	52379629	154	-12.45
CAediting_1381277	chr19_52379624_+	ENSG00000221923.7	ENST00000600321	hsa-miR-548f-3p	52379622	52379629	8mer-1a	52379612	52379629	154	-12.45
CAediting_1381277	chr19_52379624_+	ENSG00000221923.7	ENST00000600321	hsa-miR-548f-3p	52379622	52379629	8mer-1a	52379612	52379629	154	-12.45
CAediting_1381277	chr19_52379624_+	ENSG00000221923.7	ENST00000600321	hsa-miR-548f-3p	52379622	52379629	8mer-1a	52379612	52379629	154	-12.45
CAediting_1381277	chr19_52379624_+	ENSG00000221923.7	ENST00000600321	hsa-miR-548g-3p	52379622	52379627	6mer	52379608	52379628	142	-13.09
CAediting_1381274	chr19_52379592_+	ENSG00000221923.7	ENST00000600321	hsa-miR-5586-3p	52379589	52379595	7mer-m8	52379575	52379596	154	-18.69
CAediting_1381301	chr19_52380027_+	ENSG00000221923.7	ENST00000600321	hsa-miR-5690	52380024	52380030	7mer-m8	52380011	52380031	145	-16.74
CAediting_1381286	chr19_52379922_+	ENSG00000221923.7	ENST00000600321	hsa-miR-5699-3p	52379917	52379923	7mer-m8	52379903	52379924	141	-16.39
CAediting_1381273	chr19_52379584_+	ENSG00000221923.7	ENST00000600321	hsa-miR-5699-3p	52379579	52379585	7mer-m8	52379565	52379586	146	-16.39
CAediting_1381293	chr19_52379977_+	ENSG00000221923.7	ENST00000600321	hsa-miR-6086	52379975	52379981	7mer-m8	52379963	52379982	146	-21.65
CAediting_1381294	chr19_52379978_+	ENSG00000221923.7	ENST00000600321	hsa-miR-6086	52379975	52379981	7mer-m8	52379963	52379982	146	-21.65
CAediting_1381284	chr19_52379724_+	ENSG00000221923.7	ENST00000600321	hsa-miR-6514-3p	52379717	52379723	7mer-m8	52379704	52379724	155	-17.08
CAediting_1381293	chr19_52379977_+	ENSG00000221923.7	ENST00000600321	hsa-miR-6516-5p	52379971	52379977	7mer-m8	52379956	52379978	152	-14.03
CAediting_1381294	chr19_52379978_+	ENSG00000221923.7	ENST00000600321	hsa-miR-6516-5p	52379971	52379977	7mer-m8	52379956	52379978	152	-14.03
CAediting_1381286	chr19_52379922_+	ENSG00000221923.7	ENST00000600321	hsa-miR-6732-3p	52379920	52379926	7mer-m8	52379906	52379927	151	-16.58
CAediting_1381287	chr19_52379938_+	ENSG00000221923.7	ENST00000600321	hsa-miR-6736-5p	52379935	52379941	7mer-m8	52379922	52379942	143	-20.99
CAediting_1381281	chr19_52379696_+	ENSG00000221923.7	ENST00000600321	hsa-miR-6765-5p	52379689	52379695	7mer-m8	52379672	52379696	150	-26.95
CAediting_1381287	chr19_52379938_+	ENSG00000221923.7	ENST00000600321	hsa-miR-6776-5p	52379936	52379942	7mer-m8	52379924	52379943	152	-22.15
CAediting_1381300	chr19_52380023_+	ENSG00000221923.7	ENST00000600321	hsa-miR-6779-5p	52380016	52380023	8mer-1a	52380005	52380023	150	-20.32
CAediting_1381300	chr19_52380023_+	ENSG00000221923.7	ENST00000600321	hsa-miR-6780a-5p	52380016	52380023	8mer-1a	52379998	52380023	146	-19.32
CAediting_1381295	chr19_52379991_+	ENSG00000221923.7	ENST00000600321	hsa-miR-6788-5p	52379984	52379990	7mer-m8	52379966	52379991	152	-25.07
CAediting_1381277	chr19_52379624_+	ENSG00000221923.7	ENST00000600321	hsa-miR-6807-3p	52379620	52379625	6mer	52379601	52379626	147	-23.41
CAediting_1381272	chr19_52379580_+	ENSG00000221923.7	ENST00000600321	hsa-miR-6818-3p	52379577	52379583	7mer-m8	52379563	52379584	140	-11.1
CAediting_1381273	chr19_52379584_+	ENSG00000221923.7	ENST00000600321	hsa-miR-6818-3p	52379577	52379583	7mer-m8	52379563	52379584	140	-11.1
CAediting_1381295	chr19_52379991_+	ENSG00000221923.7	ENST00000600321	hsa-miR-6852-5p	52379987	52379992	6mer	52379973	52379993	140	-22.13
CAediting_1381299	chr19_52380015_+	ENSG00000221923.7	ENST00000600321	hsa-miR-6884-5p	52380013	52380019	7mer-m8	52379999	52380020	150	-18.38
CAediting_1381281	chr19_52379696_+	ENSG00000221923.7	ENST00000600321	hsa-miR-7160-5p	52379691	52379697	7mer-m8	52379681	52379698	148	-21.21
CAediting_1381299	chr19_52380015_+	ENSG00000221923.7	ENST00000600321	hsa-miR-7160-5p	52380010	52380016	7mer-m8	52379997	52380017	154	-18.84
CAediting_1381299	chr19_52380015_+	ENSG00000221923.7	ENST00000600321	hsa-miR-7162-3p	52380009	52380015	7mer-m8	52379997	52380016	152	-15.45
CAediting_1381274	chr19_52379592_+	ENSG00000221923.7	ENST00000600321	hsa-miR-759	52379590	52379596	7mer-m8	52379577	52379597	153	-19.35
CAediting_1381300	chr19_52380023_+	ENSG00000221923.7	ENST00000600321	hsa-miR-887-5p	52380017	52380023	7mer-m8	52380005	52380024	143	-18.93
CAediting_1381260	chr19_52374599_+	ENSG00000221923.7	ENST00000344085	hsa-miR-1255b-2-3p	52374597	52374603	7mer-m8	52374583	52374604	150	-13.23
CAediting_1381260	chr19_52374599_+	ENSG00000221923.7	ENST00000597976	hsa-miR-1255b-2-3p	52374597	52374603	7mer-m8	52374583	52374604	150	-13.23

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_228905	chr2_188297554_+	ENSG00000221923.7	ENST00000422689	hsa-miR-561-3p	52385406	52385412	7mer-m8	52385392	52385413	150	-9.25
CAediting_1368054	chr19_46709310_-	ENSG00000221923.7	ENST00000600321	hsa-miR-320e	52379670	52379677	8mer-1a	52379660	52379677	156	-22.63
CAediting_86358	chr1_109598906_+	ENSG00000221923.7	ENST00000600321	hsa-miR-197-5p	52379683	52379689	7mer-m8	52379666	52379690	147	-31.96
CAediting_396018	chr5_1062918_-	ENSG00000221923.7	ENST00000344085	hsa-miR-4635	52374567	52374572	6mer	52374553	52374573	142	-17.52
CAediting_396018	chr5_1062918_-	ENSG00000221923.7	ENST00000597976	hsa-miR-4635	52374567	52374572	6mer	52374553	52374573	142	-17.52

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

Differentially expressed gene-miRNA network

Top

The effects of the RNA editing to the stability of the RNA structures for ZNF880

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST

ENST type

RNA structure without RNA A-to-I editing.

RNA structure with RNA A-to-I editing.

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID

ENST

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

Top

Relation with ADAR for ZNF880

Correlation between ADAR gene expression and RNA editing frequency

Cancer

CAeditomID

position

ADAR1 (p-val)

ADAR1 (coeff.)

ADAR2 (p-val)

ADAR2 (coeff.)

ADAR3 (p-val)

ADAR3 (coeff.)

Top

Relation with cancer stages for ZNF880

Correlation between Cancer stages and RNA editing frequency

Cancer

Stage_type

CAeditomID

position

P-val

Coeff.

Top

Relation with survival for ZNF880

Correlation between RNA editing and survival

Cancer

CAeditomID

position

KMpvalue

Coxpvalue

CoxHR

Top

RelatedDrugs for ZNF880

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

Top

RelatedDiseases for ZNF880

Diseases associated with this gene.
(DisGeNet 7.0)

Gene

Disease ID

Disease name

# pubmeds

Source

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene