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Editing gene: VMAC (CAeditome ID:400673)

Gene summary for VMAC

Gene summary

Gene information	Gene symbol	VMAC
	Gene ID	400673
	Gene name	vimentin type intermediate filament associated coiled-coil protein
	Synonyms	-
	Cytomap	19p13.3
	Type of gene	protein-coding
	Description	vimentin-type intermediate filament-associated coiled-coil proteinvimentin-type IF-associated coiled-coil protein
	Modification date	20210518
	UniProtAcc	Q2NL98
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene

GO ID

GO term

PubMed ID

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RNA A-to-I events for VMAC

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000187650.3

RNA A-to-I editing events in Cancer.

CAediting_1280262(5905549, +), CAediting_1280263(5905559, +), CAediting_1280264(5906205, +), CAediting_1280265(5907501, +), CAediting_1280266(5907541, +), CAediting_1280267(5907548, +), CAediting_1280268(5907589, +), CAediting_1280269(5907665, +), CAediting_1280270(5907675, +), CAediting_1280271(5907688, +), CAediting_1280272(5907698, +), CAediting_1280273(5907736, +), CAediting_1280274(5907743, +), CAediting_1280275(5909498, +), CAediting_1280276(5909499, +), CAediting_1280277(5909505, +), CAediting_1280278(5909511, +), CAediting_1280279(5909535, +), CAediting_1280280(5909544, +), CAediting_1280281(5909553, +), CAediting_1280282(5909554, +), CAediting_1280283(5909560, +), CAediting_1280284(5909573, +), CAediting_1280285(5909579, +), CAediting_1280286(5909580, +), CAediting_1280287(5909584, +), CAediting_1280288(5909597, +), CAediting_1280289(5909609, +), CAediting_1280290(5909616, +), CAediting_1280291(5909619, +), CAediting_1280292(5909621, +), CAediting_1280293(5909629, +), CAediting_1280294(5909632, +), CAediting_1280295(5909635, +), CAediting_1280296(5909637, +), CAediting_1280297(5909643, +), CAediting_1280298(5909645, +), CAediting_1280299(5909650, +), CAediting_1280300(5909652, +), CAediting_1280301(5909661, +), CAediting_1280302(5909677, +), CAediting_1280303(5909687, +), CAediting_1280304(5909690, +), CAediting_1280305(5909699, +), CAediting_1280306(5909710, +), CAediting_1280307(5909711, +), CAediting_1280308(5909719, +), CAediting_1280309(5909724, +), CAediting_1280310(5909729, +), CAediting_1280311(5909750, +), CAediting_1280312(5909751, +), CAediting_1280313(5909760, +), CAediting_1280314(5909764, +), CAediting_1280315(5909766, +), CAediting_1280316(5909772, +), CAediting_1280317(5909773, +), CAediting_1280318(5909792, +), CAediting_1280319(5909814, +), CAediting_1280320(5909963, +), CAediting_1280321(5910004, +), CAediting_1280322(5910410, +), CAediting_1280323(5910414, +), CAediting_1280324(5910420, +), CAediting_1280325(5910439, +), CAediting_1280326(5910447, +), CAediting_1280327(5910448, +), CAediting_1280328(5910477, +), CAediting_1280329(5910482, +), CAediting_1280330(5910490, +), CAediting_1280331(5910496, +), CAediting_1280332(5910498, +), CAediting_1280333(5910501, +), CAediting_1280334(5910511, +), CAediting_1280335(5910520, +), CAediting_1280336(5910521, +), CAediting_1280337(5910532, +), CAediting_1280338(5910536, +), CAediting_1280339(5910537, +), CAediting_1280340(5910538, +), CAediting_1280341(5910541, +), CAediting_1280342(5910544, +), CAediting_1280343(5910545, +), CAediting_1280344(5910546, +), CAediting_1280345(5910547, +), CAediting_1280346(5910550, +), CAediting_1280347(5910576, +), CAediting_1280348(5910577, +), CAediting_1280349(5910590, +), CAediting_1280350(5910591, +), CAediting_1280351(5910615, +), CAediting_1280352(5910620, +), CAediting_1280353(5910622, +), CAediting_1280354(5910627, +), CAediting_1280355(5910630, +), CAediting_1280356(5910635, +), CAediting_1280357(5910640, +), CAediting_1280358(5910648, +), CAediting_1280359(5910652, +), CAediting_1280360(5910654, +), CAediting_1280361(5910658, +), CAediting_1280362(5910664, +), CAediting_1280363(5910670, +), CAediting_1280364(5910724, +), CAediting_1280365(5910834, +), CAediting_1280366(5910840, +), CAediting_1280367(5910841, +),

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RNA editing positional annotations for VMAC using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_1280262	chr19_5905549_+	intronic
CAediting_1280263	chr19_5905559_+	intronic
CAediting_1280264	chr19_5906205_+	intronic
CAediting_1280265	chr19_5907501_+	intronic
CAediting_1280266	chr19_5907541_+	intronic
CAediting_1280267	chr19_5907548_+	intronic
CAediting_1280268	chr19_5907589_+	intronic
CAediting_1280269	chr19_5907665_+	intronic
CAediting_1280270	chr19_5907675_+	intronic
CAediting_1280271	chr19_5907688_+	intronic
CAediting_1280272	chr19_5907698_+	intronic
CAediting_1280273	chr19_5907736_+	intronic
CAediting_1280274	chr19_5907743_+	intronic
CAediting_1280275	chr19_5909498_+	UTR3
CAediting_1280276	chr19_5909499_+	UTR3
CAediting_1280277	chr19_5909505_+	UTR3
CAediting_1280278	chr19_5909511_+	UTR3
CAediting_1280279	chr19_5909535_+	UTR3
CAediting_1280280	chr19_5909544_+	UTR3
CAediting_1280281	chr19_5909553_+	UTR3
CAediting_1280282	chr19_5909554_+	UTR3
CAediting_1280283	chr19_5909560_+	UTR3
CAediting_1280284	chr19_5909573_+	UTR3
CAediting_1280285	chr19_5909579_+	UTR3
CAediting_1280286	chr19_5909580_+	UTR3
CAediting_1280287	chr19_5909584_+	UTR3
CAediting_1280288	chr19_5909597_+	UTR3
CAediting_1280289	chr19_5909609_+	UTR3
CAediting_1280290	chr19_5909616_+	UTR3
CAediting_1280291	chr19_5909619_+	UTR3
CAediting_1280292	chr19_5909621_+	UTR3
CAediting_1280293	chr19_5909629_+	UTR3
CAediting_1280294	chr19_5909632_+	UTR3
CAediting_1280295	chr19_5909635_+	UTR3
CAediting_1280296	chr19_5909637_+	UTR3
CAediting_1280297	chr19_5909643_+	UTR3
CAediting_1280298	chr19_5909645_+	UTR3
CAediting_1280299	chr19_5909650_+	UTR3
CAediting_1280300	chr19_5909652_+	UTR3
CAediting_1280301	chr19_5909661_+	UTR3
CAediting_1280302	chr19_5909677_+	UTR3
CAediting_1280303	chr19_5909687_+	UTR3
CAediting_1280304	chr19_5909690_+	UTR3
CAediting_1280305	chr19_5909699_+	UTR3
CAediting_1280306	chr19_5909710_+	UTR3
CAediting_1280307	chr19_5909711_+	UTR3
CAediting_1280308	chr19_5909719_+	UTR3
CAediting_1280309	chr19_5909724_+	UTR3
CAediting_1280310	chr19_5909729_+	UTR3
CAediting_1280311	chr19_5909750_+	UTR3
CAediting_1280312	chr19_5909751_+	UTR3
CAediting_1280313	chr19_5909760_+	UTR3
CAediting_1280314	chr19_5909764_+	UTR3
CAediting_1280315	chr19_5909766_+	UTR3
CAediting_1280316	chr19_5909772_+	UTR3
CAediting_1280317	chr19_5909773_+	UTR3
CAediting_1280318	chr19_5909792_+	UTR3
CAediting_1280319	chr19_5909814_+	UTR3
CAediting_1280320	chr19_5909963_+	UTR3
CAediting_1280321	chr19_5910004_+	UTR3
CAediting_1280322	chr19_5910410_+	UTR3
CAediting_1280323	chr19_5910414_+	UTR3
CAediting_1280324	chr19_5910420_+	UTR3
CAediting_1280325	chr19_5910439_+	UTR3
CAediting_1280326	chr19_5910447_+	UTR3
CAediting_1280327	chr19_5910448_+	UTR3
CAediting_1280328	chr19_5910477_+	UTR3
CAediting_1280329	chr19_5910482_+	UTR3
CAediting_1280330	chr19_5910490_+	UTR3
CAediting_1280331	chr19_5910496_+	UTR3
CAediting_1280332	chr19_5910498_+	UTR3
CAediting_1280333	chr19_5910501_+	UTR3
CAediting_1280334	chr19_5910511_+	UTR3
CAediting_1280335	chr19_5910520_+	UTR3
CAediting_1280336	chr19_5910521_+	UTR3
CAediting_1280337	chr19_5910532_+	UTR3
CAediting_1280338	chr19_5910536_+	UTR3
CAediting_1280339	chr19_5910537_+	UTR3
CAediting_1280340	chr19_5910538_+	UTR3
CAediting_1280341	chr19_5910541_+	UTR3
CAediting_1280342	chr19_5910544_+	UTR3
CAediting_1280343	chr19_5910545_+	UTR3
CAediting_1280344	chr19_5910546_+	UTR3
CAediting_1280345	chr19_5910547_+	UTR3
CAediting_1280346	chr19_5910550_+	UTR3
CAediting_1280347	chr19_5910576_+	UTR3
CAediting_1280348	chr19_5910577_+	UTR3
CAediting_1280349	chr19_5910590_+	UTR3
CAediting_1280350	chr19_5910591_+	UTR3
CAediting_1280351	chr19_5910615_+	UTR3
CAediting_1280352	chr19_5910620_+	UTR3
CAediting_1280353	chr19_5910622_+	UTR3
CAediting_1280354	chr19_5910627_+	UTR3
CAediting_1280355	chr19_5910630_+	UTR3
CAediting_1280356	chr19_5910635_+	UTR3
CAediting_1280357	chr19_5910640_+	UTR3
CAediting_1280358	chr19_5910648_+	UTR3
CAediting_1280359	chr19_5910652_+	UTR3
CAediting_1280360	chr19_5910654_+	UTR3
CAediting_1280361	chr19_5910658_+	UTR3
CAediting_1280362	chr19_5910664_+	UTR3
CAediting_1280363	chr19_5910670_+	UTR3
CAediting_1280364	chr19_5910724_+	UTR3
CAediting_1280365	chr19_5910834_+	UTR3
CAediting_1280366	chr19_5910840_+	UTR3
CAediting_1280367	chr19_5910841_+	UTR3

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_1280262	chr19_5905549_+	SINE	Alu	AluSq2
CAediting_1280263	chr19_5905559_+	SINE	Alu	AluSq2
CAediting_1280264	chr19_5906205_+	SINE	Alu	AluJb
CAediting_1280265	chr19_5907501_+	SINE	Alu	AluSx
CAediting_1280266	chr19_5907541_+	SINE	Alu	AluSx
CAediting_1280267	chr19_5907548_+	SINE	Alu	AluSx
CAediting_1280268	chr19_5907589_+	SINE	Alu	AluSx
CAediting_1280269	chr19_5907665_+	SINE	Alu	AluSx
CAediting_1280270	chr19_5907675_+	SINE	Alu	AluSx
CAediting_1280271	chr19_5907688_+	SINE	Alu	AluSx
CAediting_1280272	chr19_5907698_+	SINE	Alu	AluSx
CAediting_1280273	chr19_5907736_+	SINE	Alu	AluSx
CAediting_1280274	chr19_5907743_+	SINE	Alu	AluSx
CAediting_1280275	chr19_5909498_+	SINE	Alu	AluSx1
CAediting_1280276	chr19_5909499_+	SINE	Alu	AluSx1
CAediting_1280277	chr19_5909505_+	SINE	Alu	AluSx1
CAediting_1280278	chr19_5909511_+	SINE	Alu	AluSx1
CAediting_1280279	chr19_5909535_+	SINE	Alu	AluSx1
CAediting_1280280	chr19_5909544_+	SINE	Alu	AluSx1
CAediting_1280281	chr19_5909553_+	SINE	Alu	AluSx1
CAediting_1280282	chr19_5909554_+	SINE	Alu	AluSx1
CAediting_1280283	chr19_5909560_+	SINE	Alu	AluSx1
CAediting_1280284	chr19_5909573_+	SINE	Alu	AluSx1
CAediting_1280285	chr19_5909579_+	SINE	Alu	AluSx1
CAediting_1280286	chr19_5909580_+	SINE	Alu	AluSx1
CAediting_1280287	chr19_5909584_+	SINE	Alu	AluSx1
CAediting_1280288	chr19_5909597_+	SINE	Alu	AluSx1
CAediting_1280289	chr19_5909609_+	SINE	Alu	AluSx1
CAediting_1280290	chr19_5909616_+	SINE	Alu	AluSx1
CAediting_1280291	chr19_5909619_+	SINE	Alu	AluSx1
CAediting_1280292	chr19_5909621_+	SINE	Alu	AluSx1
CAediting_1280293	chr19_5909629_+	SINE	Alu	AluSx1
CAediting_1280294	chr19_5909632_+	SINE	Alu	AluSx1
CAediting_1280295	chr19_5909635_+	SINE	Alu	AluSx1
CAediting_1280296	chr19_5909637_+	SINE	Alu	AluSx1
CAediting_1280297	chr19_5909643_+	SINE	Alu	AluSx1
CAediting_1280298	chr19_5909645_+	SINE	Alu	AluSx1
CAediting_1280299	chr19_5909650_+	SINE	Alu	AluSx1
CAediting_1280300	chr19_5909652_+	SINE	Alu	AluSx1
CAediting_1280301	chr19_5909661_+	SINE	Alu	AluSx1
CAediting_1280302	chr19_5909677_+	SINE	Alu	AluSx1
CAediting_1280303	chr19_5909687_+	SINE	Alu	AluSx1
CAediting_1280304	chr19_5909690_+	SINE	Alu	AluSx1
CAediting_1280305	chr19_5909699_+	SINE	Alu	AluSx1
CAediting_1280306	chr19_5909710_+	SINE	Alu	AluSx1
CAediting_1280307	chr19_5909711_+	SINE	Alu	AluSx1
CAediting_1280308	chr19_5909719_+	SINE	Alu	AluSx1
CAediting_1280309	chr19_5909724_+	SINE	Alu	AluSx1
CAediting_1280310	chr19_5909729_+	SINE	Alu	AluSx1
CAediting_1280311	chr19_5909750_+	SINE	Alu	AluSx1
CAediting_1280312	chr19_5909751_+	SINE	Alu	AluSx1
CAediting_1280313	chr19_5909760_+	SINE	Alu	AluSx1
CAediting_1280314	chr19_5909764_+	SINE	Alu	AluSx1
CAediting_1280315	chr19_5909766_+	SINE	Alu	AluSx1
CAediting_1280316	chr19_5909772_+	SINE	Alu	AluSx1
CAediting_1280317	chr19_5909773_+	SINE	Alu	AluSx1
CAediting_1280322	chr19_5910410_+	SINE	MIR	MIRb
CAediting_1280323	chr19_5910414_+	SINE	MIR	MIRb
CAediting_1280324	chr19_5910420_+	SINE	MIR	MIRb
CAediting_1280325	chr19_5910439_+	SINE	Alu	AluSx1
CAediting_1280326	chr19_5910447_+	SINE	Alu	AluSx1
CAediting_1280327	chr19_5910448_+	SINE	Alu	AluSx1
CAediting_1280328	chr19_5910477_+	SINE	Alu	AluSx1
CAediting_1280329	chr19_5910482_+	SINE	Alu	AluSx1
CAediting_1280330	chr19_5910490_+	SINE	Alu	AluSx1
CAediting_1280331	chr19_5910496_+	SINE	Alu	AluSx1
CAediting_1280332	chr19_5910498_+	SINE	Alu	AluSx1
CAediting_1280333	chr19_5910501_+	SINE	Alu	AluSx1
CAediting_1280334	chr19_5910511_+	SINE	Alu	AluSx1
CAediting_1280335	chr19_5910520_+	SINE	Alu	AluSx1
CAediting_1280336	chr19_5910521_+	SINE	Alu	AluSx1
CAediting_1280337	chr19_5910532_+	SINE	Alu	AluSx1
CAediting_1280338	chr19_5910536_+	SINE	Alu	AluSx1
CAediting_1280339	chr19_5910537_+	SINE	Alu	AluSx1
CAediting_1280340	chr19_5910538_+	SINE	Alu	AluSx1
CAediting_1280341	chr19_5910541_+	SINE	Alu	AluSx1
CAediting_1280342	chr19_5910544_+	SINE	Alu	AluSx1
CAediting_1280343	chr19_5910545_+	SINE	Alu	AluSx1
CAediting_1280344	chr19_5910546_+	SINE	Alu	AluSx1
CAediting_1280345	chr19_5910547_+	SINE	Alu	AluSx1
CAediting_1280346	chr19_5910550_+	SINE	Alu	AluSx1
CAediting_1280347	chr19_5910576_+	SINE	Alu	AluSx1
CAediting_1280348	chr19_5910577_+	SINE	Alu	AluSx1
CAediting_1280349	chr19_5910590_+	SINE	Alu	AluSx1
CAediting_1280350	chr19_5910591_+	SINE	Alu	AluSx1
CAediting_1280351	chr19_5910615_+	SINE	Alu	AluSx1
CAediting_1280352	chr19_5910620_+	SINE	Alu	AluSx1
CAediting_1280353	chr19_5910622_+	SINE	Alu	AluSx1
CAediting_1280354	chr19_5910627_+	SINE	Alu	AluSx1
CAediting_1280355	chr19_5910630_+	SINE	Alu	AluSx1
CAediting_1280356	chr19_5910635_+	SINE	Alu	AluSx1
CAediting_1280357	chr19_5910640_+	SINE	Alu	AluSx1
CAediting_1280358	chr19_5910648_+	SINE	Alu	AluSx1
CAediting_1280359	chr19_5910652_+	SINE	Alu	AluSx1
CAediting_1280360	chr19_5910654_+	SINE	Alu	AluSx1
CAediting_1280361	chr19_5910658_+	SINE	Alu	AluSx1
CAediting_1280362	chr19_5910664_+	SINE	Alu	AluSx1
CAediting_1280363	chr19_5910670_+	SINE	Alu	AluSx1
CAediting_1280364	chr19_5910724_+	SINE	MIR	MIRb
CAediting_1280365	chr19_5910834_+	SINE	Alu	AluJo
CAediting_1280366	chr19_5910840_+	SINE	Alu	AluJo
CAediting_1280367	chr19_5910841_+	SINE	Alu	AluJo

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RNA A-to-I editing events in the alternative splicing sites for VMAC

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000187650.3.VMAC.

Correlation between RNA A-to-I editing and PSI for ENSG00000187650.3.VMAC.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for VMAC

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for VMAC

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for VMAC

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1280275	chr19_5909498_+	ENSG00000187650.3	ENST00000339485	hsa-miR-371b-5p	5909493	5909500	8mer-1a	5909479	5909500	146.00	-9.99
CAediting_1280275	chr19_5909498_+	ENSG00000187650.3	ENST00000339485	hsa-miR-373-5p	5909493	5909500	8mer-1a	5909479	5909500	142.00	-10.05
CAediting_1280275	chr19_5909498_+	ENSG00000187650.3	ENST00000339485	hsa-miR-514b-5p	5909495	5909500	6mer	5909480	5909501	147.00	-13.80
CAediting_1280275	chr19_5909498_+	ENSG00000187650.3	ENST00000339485	hsa-miR-616-5p	5909493	5909500	8mer-1a	5909479	5909500	140.00	-5.71
CAediting_1280276	chr19_5909499_+	ENSG00000187650.3	ENST00000339485	hsa-miR-676-3p	5909496	5909502	7mer-m8	5909483	5909503	147.00	-17.16
CAediting_1280277	chr19_5909505_+	ENSG00000187650.3	ENST00000339485	hsa-miR-10a-5p	5909500	5909506	7mer-m8	5909485	5909507	140.00	-11.43
CAediting_1280277	chr19_5909505_+	ENSG00000187650.3	ENST00000339485	hsa-miR-10b-5p	5909500	5909506	7mer-m8	5909482	5909507	144.00	-11.43
CAediting_1280277	chr19_5909505_+	ENSG00000187650.3	ENST00000339485	hsa-miR-339-5p	5909499	5909505	7mer-m8	5909484	5909506	149.00	-14.31
CAediting_1280277	chr19_5909505_+	ENSG00000187650.3	ENST00000339485	hsa-miR-4725-5p	5909501	5909507	7mer-m8	5909488	5909508	140.00	-14.16
CAediting_1280277	chr19_5909505_+	ENSG00000187650.3	ENST00000339485	hsa-miR-504-5p	5909501	5909507	7mer-m8	5909488	5909508	146.00	-16.09
CAediting_1280277	chr19_5909505_+	ENSG00000187650.3	ENST00000339485	hsa-miR-5699-3p	5909498	5909504	7mer-m8	5909484	5909505	145.00	-16.38
CAediting_1280281	chr19_5909553_+	ENSG00000187650.3	ENST00000339485	hsa-miR-3157-5p	5909547	5909553	7mer-m8	5909533	5909554	153.00	-18.37
CAediting_1280282	chr19_5909554_+	ENSG00000187650.3	ENST00000339485	hsa-miR-1301-3p	5909552	5909559	8mer-1a	5909535	5909559	157.00	-21.24
CAediting_1280282	chr19_5909554_+	ENSG00000187650.3	ENST00000339485	hsa-miR-5047	5909552	5909559	8mer-1a	5909541	5909559	143.00	-14.80
CAediting_1280283	chr19_5909560_+	ENSG00000187650.3	ENST00000339485	hsa-miR-17-3p	5909553	5909559	7mer-m8	5909540	5909560	145.00	-15.23
CAediting_1280283	chr19_5909560_+	ENSG00000187650.3	ENST00000339485	hsa-miR-485-5p	5909557	5909563	7mer-m8	5909544	5909564	145.00	-15.77
CAediting_1280283	chr19_5909560_+	ENSG00000187650.3	ENST00000339485	hsa-miR-6884-5p	5909557	5909563	7mer-m8	5909541	5909564	146.00	-16.50
CAediting_1280284	chr19_5909573_+	ENSG00000187650.3	ENST00000339485	hsa-miR-1247-3p	5909568	5909574	7mer-m8	5909553	5909575	152.00	-25.25
CAediting_1280284	chr19_5909573_+	ENSG00000187650.3	ENST00000339485	hsa-miR-6746-5p	5909567	5909572	6mer	5909552	5909573	142.00	-31.28
CAediting_1280286	chr19_5909580_+	ENSG00000187650.3	ENST00000339485	hsa-miR-4539	5909574	5909579	6mer	5909561	5909580	141.00	-21.18
CAediting_1280286	chr19_5909580_+	ENSG00000187650.3	ENST00000339485	hsa-miR-6078	5909576	5909583	8mer-1a	5909565	5909583	149.00	-21.50
CAediting_1280289	chr19_5909609_+	ENSG00000187650.3	ENST00000339485	hsa-miR-4691-3p	5909606	5909612	7mer-m8	5909592	5909613	148.00	-25.25
CAediting_1280289	chr19_5909609_+	ENSG00000187650.3	ENST00000339485	hsa-miR-6777-3p	5909603	5909609	7mer-m8	5909591	5909610	141.00	-14.84
CAediting_1280293	chr19_5909629_+	ENSG00000187650.3	ENST00000339485	hsa-miR-4767	5909623	5909629	7mer-m8	5909608	5909630	153.00	-26.31
CAediting_1280293	chr19_5909629_+	ENSG00000187650.3	ENST00000339485	hsa-miR-6499-5p	5909622	5909628	7mer-m8	5909606	5909629	142.00	-20.92
CAediting_1280294	chr19_5909632_+	ENSG00000187650.3	ENST00000339485	hsa-miR-6786-5p	5909625	5909631	7mer-m8	5909611	5909632	148.00	-25.30
CAediting_1280305	chr19_5909699_+	ENSG00000187650.3	ENST00000339485	hsa-miR-3940-3p	5909696	5909702	7mer-m8	5909682	5909703	142.00	-21.28
CAediting_1280307	chr19_5909711_+	ENSG00000187650.3	ENST00000339485	hsa-miR-12119	5909706	5909711	6mer	5909685	5909712	141.00	-18.10
CAediting_1280307	chr19_5909711_+	ENSG00000187650.3	ENST00000339485	hsa-miR-4294	5909709	5909715	7mer-m8	5909699	5909716	150.00	-18.29
CAediting_1280307	chr19_5909711_+	ENSG00000187650.3	ENST00000339485	hsa-miR-4329	5909704	5909711	8mer-1a	5909691	5909711	147.00	-14.90
CAediting_1280308	chr19_5909719_+	ENSG00000187650.3	ENST00000339485	hsa-miR-4753-5p	5909716	5909723	8mer-1a	5909701	5909723	151.00	-19.89
CAediting_1280316	chr19_5909772_+	ENSG00000187650.3	ENST00000339485	hsa-miR-1228-3p	5909765	5909772	8mer-1a	5909753	5909772	141.00	-16.27
CAediting_1280316	chr19_5909772_+	ENSG00000187650.3	ENST00000339485	hsa-miR-342-3p	5909767	5909773	7mer-m8	5909751	5909774	155.00	-16.40
CAediting_1280316	chr19_5909772_+	ENSG00000187650.3	ENST00000339485	hsa-miR-4284	5909769	5909776	8mer-1a	5909759	5909776	151.00	-19.56
CAediting_1280323	chr19_5910414_+	ENSG00000187650.3	ENST00000339485	hsa-miR-296-5p	5910412	5910419	8mer-1a	5910399	5910419	144.00	-18.79
CAediting_1280323	chr19_5910414_+	ENSG00000187650.3	ENST00000339485	hsa-miR-4286	5910409	5910415	7mer-m8	5910400	5910416	140.00	-14.53
CAediting_1280323	chr19_5910414_+	ENSG00000187650.3	ENST00000339485	hsa-miR-4758-3p	5910410	5910416	7mer-m8	5910395	5910417	146.00	-18.73
CAediting_1280323	chr19_5910414_+	ENSG00000187650.3	ENST00000339485	hsa-miR-874-5p	5910411	5910417	7mer-m8	5910396	5910418	155.00	-25.48
CAediting_1280324	chr19_5910420_+	ENSG00000187650.3	ENST00000339485	hsa-miR-1538	5910417	5910423	7mer-m8	5910403	5910424	163.00	-35.76
CAediting_1280324	chr19_5910420_+	ENSG00000187650.3	ENST00000339485	hsa-miR-4745-3p	5910417	5910423	7mer-m8	5910399	5910424	151.00	-31.84
CAediting_1280324	chr19_5910420_+	ENSG00000187650.3	ENST00000339485	hsa-miR-6749-5p	5910413	5910419	7mer-m8	5910399	5910420	142.00	-20.67
CAediting_1280325	chr19_5910439_+	ENSG00000187650.3	ENST00000339485	hsa-miR-4634	5910436	5910442	7mer-m8	5910420	5910443	155.00	-34.29
CAediting_1280327	chr19_5910448_+	ENSG00000187650.3	ENST00000339485	hsa-miR-8052	5910446	5910452	7mer-1a	5910434	5910452	140.00	-23.18
CAediting_1280351	chr19_5910615_+	ENSG00000187650.3	ENST00000339485	hsa-miR-324-3p	5910608	5910614	7mer-m8	5910593	5910615	145.00	-24.59
CAediting_1280352	chr19_5910620_+	ENSG00000187650.3	ENST00000339485	hsa-miR-4286	5910614	5910621	8mer-1a	5910605	5910621	151.00	-22.36
CAediting_1280359	chr19_5910652_+	ENSG00000187650.3	ENST00000339485	hsa-miR-340-3p	5910646	5910653	8mer-1a	5910632	5910653	140.00	-16.40
CAediting_1280359	chr19_5910652_+	ENSG00000187650.3	ENST00000339485	hsa-miR-6827-3p	5910646	5910653	8mer-1a	5910633	5910653	147.00	-17.53
CAediting_1280361	chr19_5910658_+	ENSG00000187650.3	ENST00000339485	hsa-miR-3156-3p	5910653	5910659	7mer-m8	5910643	5910660	142.00	-16.19
CAediting_1280361	chr19_5910658_+	ENSG00000187650.3	ENST00000339485	hsa-miR-3156-3p	5910653	5910659	7mer-m8	5910643	5910660	142.00	-16.19
CAediting_1280361	chr19_5910658_+	ENSG00000187650.3	ENST00000339485	hsa-miR-4433a-5p	5910654	5910660	7mer-m8	5910642	5910661	145.00	-18.49
CAediting_1280361	chr19_5910658_+	ENSG00000187650.3	ENST00000339485	hsa-miR-5588-3p	5910655	5910661	7mer-m8	5910644	5910662	150.00	-19.70
CAediting_1280361	chr19_5910658_+	ENSG00000187650.3	ENST00000339485	hsa-miR-6777-3p	5910651	5910657	7mer-m8	5910640	5910658	142.00	-22.48
CAediting_1280364	chr19_5910724_+	ENSG00000187650.3	ENST00000339485	hsa-miR-6749-5p	5910717	5910723	7mer-m8	5910703	5910724	151.00	-24.76
CAediting_1280280	chr19_5909544_+	ENSG00000187650.3	ENST00000339485	hsa-miR-548at-3p	5909541	5909547	7mer-m8	5909529	5909548	154.00	-19.27
CAediting_1280280	chr19_5909544_+	ENSG00000187650.3	ENST00000339485	hsa-miR-548ay-3p	5909541	5909547	7mer-m8	5909528	5909548	158.00	-22.32
CAediting_1280280	chr19_5909544_+	ENSG00000187650.3	ENST00000339485	hsa-miR-548o-3p	5909543	5909548	6mer	5909529	5909549	147.00	-21.52
CAediting_1280280	chr19_5909544_+	ENSG00000187650.3	ENST00000339485	hsa-miR-548o-3p	5909543	5909548	6mer	5909529	5909549	147.00	-21.52
CAediting_1280287	chr19_5909584_+	ENSG00000187650.3	ENST00000339485	hsa-miR-589-5p	5909582	5909588	7mer-m8	5909569	5909589	150.00	-15.69
CAediting_1280300	chr19_5909652_+	ENSG00000187650.3	ENST00000339485	hsa-miR-4803	5909647	5909653	7mer-m8	5909633	5909654	149.00	-10.75
CAediting_1280304	chr19_5909690_+	ENSG00000187650.3	ENST00000339485	hsa-miR-433-5p	5909684	5909690	7mer-m8	5909670	5909691	147.00	-21.62
CAediting_1280309	chr19_5909724_+	ENSG00000187650.3	ENST00000339485	hsa-miR-6814-5p	5909719	5909725	7mer-m8	5909705	5909726	147.00	-18.03
CAediting_1280310	chr19_5909729_+	ENSG00000187650.3	ENST00000339485	hsa-miR-4776-5p	5909726	5909732	7mer-m8	5909711	5909733	147.00	-23.08
CAediting_1280310	chr19_5909729_+	ENSG00000187650.3	ENST00000339485	hsa-miR-4776-5p	5909726	5909732	7mer-m8	5909711	5909733	147.00	-23.08
CAediting_1280310	chr19_5909729_+	ENSG00000187650.3	ENST00000339485	hsa-miR-4800-5p	5909727	5909733	7mer-m8	5909714	5909734	152.00	-25.02
CAediting_1280312	chr19_5909751_+	ENSG00000187650.3	ENST00000339485	hsa-miR-4639-3p	5909748	5909754	7mer-m8	5909736	5909755	140.00	-11.99
CAediting_1280318	chr19_5909792_+	ENSG00000187650.3	ENST00000339485	hsa-miR-3918	5909785	5909791	7mer-m8	5909772	5909792	146.00	-22.85
CAediting_1280318	chr19_5909792_+	ENSG00000187650.3	ENST00000339485	hsa-miR-4685-5p	5909786	5909792	7mer-m8	5909767	5909793	167.00	-33.66
CAediting_1280318	chr19_5909792_+	ENSG00000187650.3	ENST00000339485	hsa-miR-5704	5909790	5909796	7mer-m8	5909776	5909797	140.00	-17.17
CAediting_1280318	chr19_5909792_+	ENSG00000187650.3	ENST00000339485	hsa-miR-6837-5p	5909786	5909792	7mer-m8	5909773	5909793	148.00	-23.75
CAediting_1280326	chr19_5910447_+	ENSG00000187650.3	ENST00000339485	hsa-miR-513a-5p	5910441	5910447	7mer-m8	5910428	5910448	147.00	-18.35
CAediting_1280326	chr19_5910447_+	ENSG00000187650.3	ENST00000339485	hsa-miR-513a-5p	5910441	5910447	7mer-m8	5910428	5910448	147.00	-18.35
CAediting_1280326	chr19_5910447_+	ENSG00000187650.3	ENST00000339485	hsa-miR-638	5910446	5910452	7mer-1a	5910428	5910452	163.00	-34.87
CAediting_1280329	chr19_5910482_+	ENSG00000187650.3	ENST00000339485	hsa-miR-4726-3p	5910476	5910482	7mer-m8	5910460	5910483	151.00	-25.47
CAediting_1280330	chr19_5910490_+	ENSG00000187650.3	ENST00000339485	hsa-miR-4732-3p	5910483	5910489	7mer-m8	5910470	5910490	155.00	-20.69
CAediting_1280331	chr19_5910496_+	ENSG00000187650.3	ENST00000339485	hsa-miR-4281	5910493	5910500	8mer-1a	5910483	5910500	142.00	-19.48
CAediting_1280331	chr19_5910496_+	ENSG00000187650.3	ENST00000339485	hsa-miR-6716-3p	5910489	5910495	7mer-m8	5910477	5910496	152.00	-23.74
CAediting_1280332	chr19_5910498_+	ENSG00000187650.3	ENST00000339485	hsa-miR-6878-3p	5910494	5910500	7mer-m8	5910479	5910501	150.00	-19.39
CAediting_1280333	chr19_5910501_+	ENSG00000187650.3	ENST00000339485	hsa-miR-3141	5910498	5910504	7mer-m8	5910486	5910505	141.00	-19.09
CAediting_1280334	chr19_5910511_+	ENSG00000187650.3	ENST00000339485	hsa-miR-3190-5p	5910504	5910510	7mer-m8	5910492	5910511	150.00	-18.87
CAediting_1280335	chr19_5910520_+	ENSG00000187650.3	ENST00000339485	hsa-miR-1229-3p	5910514	5910520	7mer-m8	5910497	5910521	146.00	-16.14
CAediting_1280335	chr19_5910520_+	ENSG00000187650.3	ENST00000339485	hsa-miR-6511a-3p	5910513	5910520	8mer-1a	5910499	5910520	145.00	-15.20
CAediting_1280335	chr19_5910520_+	ENSG00000187650.3	ENST00000339485	hsa-miR-6511a-3p	5910513	5910520	8mer-1a	5910499	5910520	145.00	-15.20
CAediting_1280335	chr19_5910520_+	ENSG00000187650.3	ENST00000339485	hsa-miR-6511a-3p	5910513	5910520	8mer-1a	5910499	5910520	145.00	-15.20
CAediting_1280335	chr19_5910520_+	ENSG00000187650.3	ENST00000339485	hsa-miR-6511a-3p	5910513	5910520	8mer-1a	5910499	5910520	145.00	-15.20
CAediting_1280335	chr19_5910520_+	ENSG00000187650.3	ENST00000339485	hsa-miR-6511b-3p	5910513	5910520	8mer-1a	5910498	5910520	140.00	-13.68
CAediting_1280335	chr19_5910520_+	ENSG00000187650.3	ENST00000339485	hsa-miR-6511b-3p	5910513	5910520	8mer-1a	5910498	5910520	140.00	-13.68
CAediting_1280336	chr19_5910521_+	ENSG00000187650.3	ENST00000339485	hsa-miR-412-3p	5910514	5910520	7mer-m8	5910499	5910521	151.00	-16.53
CAediting_1280336	chr19_5910521_+	ENSG00000187650.3	ENST00000339485	hsa-miR-4508	5910519	5910525	7mer-m8	5910510	5910526	140.00	-21.85
CAediting_1280336	chr19_5910521_+	ENSG00000187650.3	ENST00000339485	hsa-miR-6754-3p	5910514	5910520	7mer-m8	5910501	5910521	144.00	-15.76
CAediting_1280337	chr19_5910532_+	ENSG00000187650.3	ENST00000339485	hsa-miR-374b-3p	5910529	5910536	8mer-1a	5910514	5910536	147.00	-12.57
CAediting_1280338	chr19_5910536_+	ENSG00000187650.3	ENST00000339485	hsa-miR-325	5910529	5910536	8mer-1a	5910514	5910536	141.00	-10.26
CAediting_1280339	chr19_5910537_+	ENSG00000187650.3	ENST00000339485	hsa-miR-630	5910535	5910541	7mer-m8	5910522	5910542	158.00	-17.41
CAediting_1280341	chr19_5910541_+	ENSG00000187650.3	ENST00000339485	hsa-miR-153-5p	5910534	5910540	7mer-m8	5910519	5910541	144.00	-8.17
CAediting_1280342	chr19_5910544_+	ENSG00000187650.3	ENST00000339485	hsa-miR-16-1-3p	5910537	5910544	8mer-1a	5910523	5910544	140.00	-9.64
CAediting_1280342	chr19_5910544_+	ENSG00000187650.3	ENST00000339485	hsa-miR-205-3p	5910541	5910547	7mer-m8	5910528	5910548	146.00	-13.52
CAediting_1280342	chr19_5910544_+	ENSG00000187650.3	ENST00000339485	hsa-miR-30a-3p	5910540	5910546	7mer-m8	5910529	5910547	146.00	-8.19
CAediting_1280342	chr19_5910544_+	ENSG00000187650.3	ENST00000339485	hsa-miR-30d-3p	5910540	5910546	7mer-m8	5910529	5910547	148.00	-8.24
CAediting_1280342	chr19_5910544_+	ENSG00000187650.3	ENST00000339485	hsa-miR-30e-3p	5910540	5910546	7mer-m8	5910529	5910547	150.00	-6.98
CAediting_1280347	chr19_5910576_+	ENSG00000187650.3	ENST00000339485	hsa-miR-513a-5p	5910570	5910576	7mer-m8	5910560	5910577	148.00	-19.54
CAediting_1280347	chr19_5910576_+	ENSG00000187650.3	ENST00000339485	hsa-miR-513a-5p	5910570	5910576	7mer-m8	5910560	5910577	148.00	-19.54
CAediting_1280347	chr19_5910576_+	ENSG00000187650.3	ENST00000339485	hsa-miR-638	5910575	5910581	7mer-1a	5910557	5910581	151.00	-33.21
CAediting_1280355	chr19_5910630_+	ENSG00000187650.3	ENST00000339485	hsa-miR-4746-3p	5910624	5910630	7mer-m8	5910611	5910631	140.00	-20.11
CAediting_1280357	chr19_5910640_+	ENSG00000187650.3	ENST00000339485	hsa-miR-4743-5p	5910636	5910642	7mer-m8	5910621	5910643	147.00	-23.57
CAediting_1280360	chr19_5910654_+	ENSG00000187650.3	ENST00000339485	hsa-miR-10a-5p	5910649	5910655	7mer-m8	5910636	5910656	146.00	-21.17
CAediting_1280360	chr19_5910654_+	ENSG00000187650.3	ENST00000339485	hsa-miR-10b-5p	5910649	5910655	7mer-m8	5910634	5910656	140.00	-20.23
CAediting_1280360	chr19_5910654_+	ENSG00000187650.3	ENST00000339485	hsa-miR-339-5p	5910648	5910654	7mer-m8	5910633	5910655	163.00	-28.59
CAediting_1280360	chr19_5910654_+	ENSG00000187650.3	ENST00000339485	hsa-miR-3620-3p	5910650	5910657	8mer-1a	5910636	5910657	155.00	-25.22
CAediting_1280360	chr19_5910654_+	ENSG00000187650.3	ENST00000339485	hsa-miR-4421	5910647	5910653	7mer-m8	5910632	5910654	146.00	-21.68
CAediting_1280360	chr19_5910654_+	ENSG00000187650.3	ENST00000339485	hsa-miR-6784-3p	5910652	5910659	8mer-1a	5910638	5910659	147.00	-25.34
CAediting_1280360	chr19_5910654_+	ENSG00000187650.3	ENST00000339485	hsa-miR-6862-3p	5910652	5910659	8mer-1a	5910635	5910659	166.00	-27.72
CAediting_1280360	chr19_5910654_+	ENSG00000187650.3	ENST00000339485	hsa-miR-6862-3p	5910652	5910659	8mer-1a	5910635	5910659	166.00	-27.72
CAediting_1280367	chr19_5910841_+	ENSG00000187650.3	ENST00000339485	hsa-miR-3664-5p	5910837	5910843	7mer-m8	5910823	5910844	151.00	-15.54
CAediting_1280367	chr19_5910841_+	ENSG00000187650.3	ENST00000339485	hsa-miR-4522	5910838	5910844	7mer-m8	5910825	5910845	149.00	-13.13
CAediting_1280367	chr19_5910841_+	ENSG00000187650.3	ENST00000339485	hsa-miR-6888-3p	5910835	5910841	7mer-m8	5910822	5910842	145.00	-12.70
CAediting_1280295	chr19_5909635_+	ENSG00000187650.3	ENST00000339485	hsa-miR-4466	5909632	5909638	7mer-m8	5909620	5909639	146.00	-28.95
CAediting_1280295	chr19_5909635_+	ENSG00000187650.3	ENST00000339485	hsa-miR-675-5p	5909632	5909638	7mer-m8	5909616	5909639	152.00	-25.42
CAediting_1280350	chr19_5910591_+	ENSG00000187650.3	ENST00000339485	hsa-miR-24-3p	5910586	5910592	7mer-m8	5910574	5910593	156.00	-19.14
CAediting_1280350	chr19_5910591_+	ENSG00000187650.3	ENST00000339485	hsa-miR-24-3p	5910586	5910592	7mer-m8	5910574	5910593	156.00	-19.14
CAediting_1280350	chr19_5910591_+	ENSG00000187650.3	ENST00000339485	hsa-miR-4437	5910587	5910593	7mer-m8	5910574	5910594	145.00	-19.77
CAediting_1280350	chr19_5910591_+	ENSG00000187650.3	ENST00000339485	hsa-miR-4797-3p	5910584	5910590	7mer-m8	5910571	5910591	153.00	-14.46
CAediting_1280358	chr19_5910648_+	ENSG00000187650.3	ENST00000339485	hsa-miR-361-3p	5910642	5910649	8mer-1a	5910627	5910649	153.00	-24.26

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1280326	chr19_5910447_+	ENSG00000187650.3	ENST00000339485	hsa-miR-10399-5p	5910442	5910448	7mer-m8	5910432	5910449	143	-10.9
CAediting_1280327	chr19_5910448_+	ENSG00000187650.3	ENST00000339485	hsa-miR-10399-5p	5910442	5910448	7mer-m8	5910432	5910449	143	-10.9
CAediting_1280347	chr19_5910576_+	ENSG00000187650.3	ENST00000339485	hsa-miR-10399-5p	5910571	5910577	7mer-m8	5910555	5910578	141	-15.08
CAediting_1280348	chr19_5910577_+	ENSG00000187650.3	ENST00000339485	hsa-miR-10399-5p	5910571	5910577	7mer-m8	5910555	5910578	141	-15.08
CAediting_1280313	chr19_5909760_+	ENSG00000187650.3	ENST00000339485	hsa-miR-1184	5909754	5909760	7mer-m8	5909738	5909761	161	-22.82
CAediting_1280313	chr19_5909760_+	ENSG00000187650.3	ENST00000339485	hsa-miR-1184	5909754	5909760	7mer-m8	5909738	5909761	161	-22.82
CAediting_1280313	chr19_5909760_+	ENSG00000187650.3	ENST00000339485	hsa-miR-1184	5909754	5909760	7mer-m8	5909738	5909761	161	-22.82
CAediting_1280321	chr19_5910004_+	ENSG00000187650.3	ENST00000339485	hsa-miR-1200	5910000	5910007	8mer-1a	5909986	5910007	140	-13.4
CAediting_1280324	chr19_5910420_+	ENSG00000187650.3	ENST00000339485	hsa-miR-1234-3p	5910418	5910424	7mer-m8	5910405	5910425	147	-22.51
CAediting_1280328	chr19_5910477_+	ENSG00000187650.3	ENST00000339485	hsa-miR-125a-3p	5910474	5910481	8mer-1a	5910460	5910481	144	-19.84
CAediting_1280278	chr19_5909511_+	ENSG00000187650.3	ENST00000339485	hsa-miR-1296-3p	5909507	5909512	6mer	5909493	5909513	142	-20.81
CAediting_1280318	chr19_5909792_+	ENSG00000187650.3	ENST00000339485	hsa-miR-1296-5p	5909785	5909791	7mer-m8	5909772	5909792	145	-18.42
CAediting_1280335	chr19_5910520_+	ENSG00000187650.3	ENST00000339485	hsa-miR-193b-5p	5910518	5910524	7mer-m8	5910504	5910525	142	-20.42
CAediting_1280336	chr19_5910521_+	ENSG00000187650.3	ENST00000339485	hsa-miR-193b-5p	5910518	5910524	7mer-m8	5910504	5910525	142	-20.42
CAediting_1280349	chr19_5910590_+	ENSG00000187650.3	ENST00000339485	hsa-miR-222-5p	5910583	5910590	8mer-1a	5910569	5910590	147	-13.74
CAediting_1280288	chr19_5909597_+	ENSG00000187650.3	ENST00000339485	hsa-miR-2392	5909595	5909600	6mer	5909581	5909601	140	-20.64
CAediting_1280299	chr19_5909650_+	ENSG00000187650.3	ENST00000339485	hsa-miR-3163	5909644	5909651	8mer-1a	5909630	5909651	141	-12.44
CAediting_1280332	chr19_5910498_+	ENSG00000187650.3	ENST00000339485	hsa-miR-323a-5p	5910496	5910502	7mer-m8	5910482	5910503	143	-20.19
CAediting_1280333	chr19_5910501_+	ENSG00000187650.3	ENST00000339485	hsa-miR-323a-5p	5910496	5910502	7mer-m8	5910482	5910503	143	-20.19
CAediting_1280279	chr19_5909535_+	ENSG00000187650.3	ENST00000339485	hsa-miR-324-3p	5909532	5909538	7mer-m8	5909515	5909539	155	-25.31
CAediting_1280364	chr19_5910724_+	ENSG00000187650.3	ENST00000339485	hsa-miR-326	5910720	5910726	7mer-m8	5910708	5910727	153	-25.22
CAediting_1280357	chr19_5910640_+	ENSG00000187650.3	ENST00000339485	hsa-miR-3652	5910636	5910642	7mer-m8	5910624	5910643	148	-21.89
CAediting_1280305	chr19_5909699_+	ENSG00000187650.3	ENST00000339485	hsa-miR-3663-5p	5909694	5909699	6mer	5909680	5909700	140	-25.1
CAediting_1280363	chr19_5910670_+	ENSG00000187650.3	ENST00000339485	hsa-miR-3672	5910663	5910670	8mer-1a	5910650	5910670	145	-14.35
CAediting_1280351	chr19_5910615_+	ENSG00000187650.3	ENST00000339485	hsa-miR-3680-5p	5910610	5910616	7mer-m8	5910595	5910617	141	-17.24
CAediting_1280351	chr19_5910615_+	ENSG00000187650.3	ENST00000339485	hsa-miR-3680-5p	5910610	5910616	7mer-m8	5910595	5910617	141	-17.24
CAediting_1280284	chr19_5909573_+	ENSG00000187650.3	ENST00000339485	hsa-miR-3689a-3p	5909566	5909572	7mer-m8	5909553	5909573	150	-24.97
CAediting_1280308	chr19_5909719_+	ENSG00000187650.3	ENST00000339485	hsa-miR-3974	5909716	5909723	8mer-1a	5909698	5909723	142	-13.41
CAediting_1280313	chr19_5909760_+	ENSG00000187650.3	ENST00000339485	hsa-miR-4418	5909755	5909761	7mer-m8	5909745	5909762	152	-15.15
CAediting_1280295	chr19_5909635_+	ENSG00000187650.3	ENST00000339485	hsa-miR-4455	5909633	5909639	7mer-m8	5909625	5909640	148	-16.9
CAediting_1280296	chr19_5909637_+	ENSG00000187650.3	ENST00000339485	hsa-miR-4455	5909633	5909639	7mer-m8	5909625	5909640	148	-16.9
CAediting_1280278	chr19_5909511_+	ENSG00000187650.3	ENST00000339485	hsa-miR-4481	5909507	5909513	7mer-m8	5909498	5909514	142	-16.81
CAediting_1280333	chr19_5910501_+	ENSG00000187650.3	ENST00000339485	hsa-miR-4483	5910497	5910503	7mer-m8	5910488	5910504	150	-19.35
CAediting_1280362	chr19_5910664_+	ENSG00000187650.3	ENST00000339485	hsa-miR-4499	5910661	5910667	7mer-m8	5910652	5910668	145	-13.56
CAediting_1280277	chr19_5909505_+	ENSG00000187650.3	ENST00000339485	hsa-miR-4522	5909501	5909507	7mer-m8	5909489	5909508	150	-12.43
CAediting_1280278	chr19_5909511_+	ENSG00000187650.3	ENST00000339485	hsa-miR-4648	5909505	5909511	7mer-m8	5909493	5909512	145	-14.84
CAediting_1280281	chr19_5909553_+	ENSG00000187650.3	ENST00000339485	hsa-miR-4662a-5p	5909546	5909553	8mer-1a	5909532	5909553	149	-17.17
CAediting_1280330	chr19_5910490_+	ENSG00000187650.3	ENST00000339485	hsa-miR-4680-5p	5910488	5910493	6mer	5910474	5910494	146	-20.71
CAediting_1280301	chr19_5909661_+	ENSG00000187650.3	ENST00000339485	hsa-miR-4684-5p	5909658	5909664	7mer-m8	5909644	5909665	147	-9.57
CAediting_1280358	chr19_5910648_+	ENSG00000187650.3	ENST00000339485	hsa-miR-4713-5p	5910643	5910649	7mer-m8	5910629	5910650	140	-14.63
CAediting_1280334	chr19_5910511_+	ENSG00000187650.3	ENST00000339485	hsa-miR-4716-5p	5910509	5910515	7mer-m8	5910495	5910516	140	-11.3
CAediting_1280344	chr19_5910546_+	ENSG00000187650.3	ENST00000339485	hsa-miR-4735-5p	5910544	5910550	7mer-m8	5910530	5910551	148	-5.48
CAediting_1280345	chr19_5910547_+	ENSG00000187650.3	ENST00000339485	hsa-miR-4735-5p	5910544	5910550	7mer-m8	5910530	5910551	148	-5.48
CAediting_1280346	chr19_5910550_+	ENSG00000187650.3	ENST00000339485	hsa-miR-4735-5p	5910544	5910550	7mer-m8	5910530	5910551	148	-5.48
CAediting_1280365	chr19_5910834_+	ENSG00000187650.3	ENST00000339485	hsa-miR-4753-3p	5910831	5910837	7mer-m8	5910817	5910838	140	-5.86
CAediting_1280321	chr19_5910004_+	ENSG00000187650.3	ENST00000339485	hsa-miR-4758-5p	5909998	5910003	6mer	5909984	5910004	145	-25.79
CAediting_1280343	chr19_5910545_+	ENSG00000187650.3	ENST00000339485	hsa-miR-4775	5910543	5910549	7mer-m8	5910528	5910550	149	-6.02
CAediting_1280344	chr19_5910546_+	ENSG00000187650.3	ENST00000339485	hsa-miR-4775	5910543	5910549	7mer-m8	5910528	5910550	149	-6.02
CAediting_1280345	chr19_5910547_+	ENSG00000187650.3	ENST00000339485	hsa-miR-4775	5910543	5910549	7mer-m8	5910528	5910550	149	-6.02
CAediting_1280346	chr19_5910550_+	ENSG00000187650.3	ENST00000339485	hsa-miR-4775	5910543	5910549	7mer-m8	5910528	5910550	149	-6.02
CAediting_1280334	chr19_5910511_+	ENSG00000187650.3	ENST00000339485	hsa-miR-4781-3p	5910507	5910513	7mer-m8	5910493	5910514	140	-14.54
CAediting_1280284	chr19_5909573_+	ENSG00000187650.3	ENST00000339485	hsa-miR-490-3p	5909570	5909576	7mer-m8	5909555	5909577	146	-17.33
CAediting_1280279	chr19_5909535_+	ENSG00000187650.3	ENST00000339485	hsa-miR-500a-3p	5909529	5909534	6mer	5909514	5909535	144	-20.15
CAediting_1280356	chr19_5910635_+	ENSG00000187650.3	ENST00000339485	hsa-miR-504-3p	5910632	5910639	8mer-1a	5910619	5910639	152	-23.54
CAediting_1280327	chr19_5910448_+	ENSG00000187650.3	ENST00000339485	hsa-miR-5089-5p	5910446	5910452	7mer-m8	5910433	5910453	144	-12.73
CAediting_1280348	chr19_5910577_+	ENSG00000187650.3	ENST00000339485	hsa-miR-5089-5p	5910575	5910581	7mer-m8	5910563	5910582	148	-15.19
CAediting_1280313	chr19_5909760_+	ENSG00000187650.3	ENST00000339485	hsa-miR-509-3-5p	5909755	5909761	7mer-m8	5909740	5909762	144	-17.6
CAediting_1280313	chr19_5909760_+	ENSG00000187650.3	ENST00000339485	hsa-miR-509-5p	5909755	5909761	7mer-m8	5909741	5909762	144	-15.96
CAediting_1280313	chr19_5909760_+	ENSG00000187650.3	ENST00000339485	hsa-miR-509-5p	5909755	5909761	7mer-m8	5909741	5909762	144	-15.96
CAediting_1280293	chr19_5909629_+	ENSG00000187650.3	ENST00000339485	hsa-miR-541-3p	5909624	5909631	8mer-1a	5909608	5909631	147	-22.35
CAediting_1280320	chr19_5909963_+	ENSG00000187650.3	ENST00000339485	hsa-miR-542-3p	5909957	5909963	7mer-m8	5909943	5909964	148	-15.96
CAediting_1280289	chr19_5909609_+	ENSG00000187650.3	ENST00000339485	hsa-miR-5690	5909606	5909612	7mer-m8	5909593	5909613	145	-16.77
CAediting_1280357	chr19_5910640_+	ENSG00000187650.3	ENST00000339485	hsa-miR-5787	5910637	5910642	6mer	5910623	5910643	145	-27.7
CAediting_1280342	chr19_5910544_+	ENSG00000187650.3	ENST00000339485	hsa-miR-590-3p	5910542	5910549	8mer-1a	5910530	5910549	151	-9.67
CAediting_1280343	chr19_5910545_+	ENSG00000187650.3	ENST00000339485	hsa-miR-590-3p	5910542	5910549	8mer-1a	5910530	5910549	151	-9.67
CAediting_1280344	chr19_5910546_+	ENSG00000187650.3	ENST00000339485	hsa-miR-590-3p	5910542	5910549	8mer-1a	5910530	5910549	151	-9.67
CAediting_1280345	chr19_5910547_+	ENSG00000187650.3	ENST00000339485	hsa-miR-590-3p	5910542	5910549	8mer-1a	5910530	5910549	151	-9.67
CAediting_1280283	chr19_5909560_+	ENSG00000187650.3	ENST00000339485	hsa-miR-6086	5909557	5909563	7mer-m8	5909544	5909564	145	-20.69
CAediting_1280362	chr19_5910664_+	ENSG00000187650.3	ENST00000339485	hsa-miR-627-5p	5910657	5910663	7mer-m8	5910643	5910664	145	-12.17
CAediting_1280328	chr19_5910477_+	ENSG00000187650.3	ENST00000339485	hsa-miR-640	5910470	5910476	7mer-m8	5910457	5910477	142	-18.22
CAediting_1280326	chr19_5910447_+	ENSG00000187650.3	ENST00000339485	hsa-miR-6504-3p	5910442	5910448	7mer-m8	5910430	5910449	140	-7.64
CAediting_1280327	chr19_5910448_+	ENSG00000187650.3	ENST00000339485	hsa-miR-6504-3p	5910442	5910448	7mer-m8	5910430	5910449	140	-7.64
CAediting_1280283	chr19_5909560_+	ENSG00000187650.3	ENST00000339485	hsa-miR-6516-5p	5909553	5909559	7mer-m8	5909539	5909560	142	-12.29
CAediting_1280293	chr19_5909629_+	ENSG00000187650.3	ENST00000339485	hsa-miR-654-5p	5909624	5909631	8mer-1a	5909611	5909631	144	-21.31
CAediting_1280292	chr19_5909621_+	ENSG00000187650.3	ENST00000339485	hsa-miR-6720-3p	5909619	5909625	7mer-m8	5909605	5909626	148	-18.9
CAediting_1280284	chr19_5909573_+	ENSG00000187650.3	ENST00000339485	hsa-miR-6779-5p	5909566	5909572	7mer-m8	5909555	5909573	152	-25.71
CAediting_1280284	chr19_5909573_+	ENSG00000187650.3	ENST00000339485	hsa-miR-6780a-5p	5909566	5909572	7mer-m8	5909550	5909573	146	-21.2
CAediting_1280360	chr19_5910654_+	ENSG00000187650.3	ENST00000339485	hsa-miR-6794-3p	5910651	5910657	7mer-m8	5910639	5910658	151	-21.65
CAediting_1280361	chr19_5910658_+	ENSG00000187650.3	ENST00000339485	hsa-miR-6794-3p	5910651	5910657	7mer-m8	5910639	5910658	151	-21.65
CAediting_1280279	chr19_5909535_+	ENSG00000187650.3	ENST00000339485	hsa-miR-6807-3p	5909531	5909536	6mer	5909515	5909537	152	-27.87
CAediting_1280366	chr19_5910840_+	ENSG00000187650.3	ENST00000339485	hsa-miR-6818-3p	5910833	5910840	8mer-1a	5910819	5910840	145	-12.25
CAediting_1280337	chr19_5910532_+	ENSG00000187650.3	ENST00000339485	hsa-miR-6832-5p	5910526	5910532	7mer-m8	5910511	5910533	142	-16.66
CAediting_1280331	chr19_5910496_+	ENSG00000187650.3	ENST00000339485	hsa-miR-6843-3p	5910494	5910500	7mer-m8	5910482	5910501	152	-19.12
CAediting_1280332	chr19_5910498_+	ENSG00000187650.3	ENST00000339485	hsa-miR-6843-3p	5910494	5910500	7mer-m8	5910482	5910501	152	-19.12
CAediting_1280333	chr19_5910501_+	ENSG00000187650.3	ENST00000339485	hsa-miR-6843-3p	5910494	5910500	7mer-m8	5910482	5910501	152	-19.12
CAediting_1280331	chr19_5910496_+	ENSG00000187650.3	ENST00000339485	hsa-miR-6848-3p	5910494	5910500	7mer-m8	5910484	5910501	142	-17.69
CAediting_1280332	chr19_5910498_+	ENSG00000187650.3	ENST00000339485	hsa-miR-6848-3p	5910494	5910500	7mer-m8	5910484	5910501	142	-17.69
CAediting_1280333	chr19_5910501_+	ENSG00000187650.3	ENST00000339485	hsa-miR-6848-3p	5910494	5910500	7mer-m8	5910484	5910501	142	-17.69
CAediting_1280284	chr19_5909573_+	ENSG00000187650.3	ENST00000339485	hsa-miR-6852-5p	5909569	5909574	6mer	5909555	5909575	140	-21.22
CAediting_1280362	chr19_5910664_+	ENSG00000187650.3	ENST00000339485	hsa-miR-6857-3p	5910660	5910666	7mer-m8	5910647	5910667	152	-16.92
CAediting_1280363	chr19_5910670_+	ENSG00000187650.3	ENST00000339485	hsa-miR-6864-3p	5910663	5910670	8mer-1a	5910649	5910670	153	-16.62
CAediting_1280359	chr19_5910652_+	ENSG00000187650.3	ENST00000339485	hsa-miR-6888-3p	5910647	5910653	7mer-m8	5910634	5910654	145	-16.11
CAediting_1280360	chr19_5910654_+	ENSG00000187650.3	ENST00000339485	hsa-miR-6888-3p	5910647	5910653	7mer-m8	5910634	5910654	145	-16.11
CAediting_1280277	chr19_5909505_+	ENSG00000187650.3	ENST00000339485	hsa-miR-6888-3p	5909498	5909504	7mer-m8	5909485	5909505	143	-9.4
CAediting_1280324	chr19_5910420_+	ENSG00000187650.3	ENST00000339485	hsa-miR-7107-5p	5910418	5910424	7mer-m8	5910404	5910425	150	-24.34
CAediting_1280326	chr19_5910447_+	ENSG00000187650.3	ENST00000339485	hsa-miR-7151-3p	5910440	5910447	8mer-1a	5910426	5910447	146	-17.65
CAediting_1280347	chr19_5910576_+	ENSG00000187650.3	ENST00000339485	hsa-miR-7151-3p	5910569	5910576	8mer-1a	5910556	5910576	140	-11.7
CAediting_1280278	chr19_5909511_+	ENSG00000187650.3	ENST00000339485	hsa-miR-759	5909509	5909515	7mer-m8	5909494	5909516	143	-15.54
CAediting_1280303	chr19_5909687_+	ENSG00000187650.3	ENST00000339485	hsa-miR-7855-5p	5909684	5909689	6mer	5909669	5909690	142	-24.6
CAediting_1280304	chr19_5909690_+	ENSG00000187650.3	ENST00000339485	hsa-miR-7855-5p	5909684	5909689	6mer	5909669	5909690	142	-24.6
CAediting_1280290	chr19_5909616_+	ENSG00000187650.3	ENST00000339485	hsa-miR-7977	5909609	5909615	7mer-m8	5909599	5909616	142	-13
CAediting_1280280	chr19_5909544_+	ENSG00000187650.3	ENST00000339485	hsa-miR-8063	5909542	5909548	7mer-m8	5909530	5909549	141	-14.17
CAediting_1280362	chr19_5910664_+	ENSG00000187650.3	ENST00000339485	hsa-miR-873-3p	5910662	5910669	8mer-1a	5910648	5910669	145	-16.19
CAediting_1280361	chr19_5910658_+	ENSG00000187650.3	ENST00000339485	hsa-miR-924	5910657	5910663	7mer-1a	5910644	5910663	146	-18.6

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_86358	chr1_109598906_+	ENSG00000187650.3	ENST00000339485	hsa-miR-197-5p	5909729	5909735	7mer-m8	5909708	5909736	142	-30.16
CAediting_468389	chr6_31355314_-	ENSG00000187650.3	ENST00000339485	hsa-miR-6891-5p	5909992	5909999	8mer-1a	5909981	5909999	148	-26.09

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for VMAC

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST

ENST type

RNA structure without RNA A-to-I editing.

RNA structure with RNA A-to-I editing.

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID

ENST

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

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Relation with ADAR for VMAC

Correlation between ADAR gene expression and RNA editing frequency

Cancer	CAeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
BRCA	CAediting_1280275	chr19_5909498_+	5.54779018036673e-13	0.274754366706098	.	.	.	.
LUSC	CAediting_1280275	chr19_5909498_+	0.00597763931209543	0.226491805916312	0.00867430742163623	0.216494445582314	.	.
PRAD	CAediting_1280275	chr19_5909498_+	0.034323045064906	0.117615988656887	.	.	.	.
THCA	CAediting_1280275	chr19_5909498_+	0.00913168349327407	0.174615456504799	.	.	.	.
UCEC	CAediting_1280275	chr19_5909498_+	0.00969176197205084	0.244541503648829	.	.	.	.
LAML	CAediting_1280275	chr19_5909498_+	.	.	.	.	0.0113273746207641	0.327552749479846
SKCM	CAediting_1280275	chr19_5909498_+	.	.	0.0116499831929136	0.190850251558712	.	.
THYM	CAediting_1280275	chr19_5909498_+	0.00129980363742043	0.412304176741389	.	.	.	.
THCA	CAediting_1280278	chr19_5909511_+	.	.	.	.	0.00570073705322123	0.277316931309745
OV	CAediting_1280278	chr19_5909511_+	.	.	.	.	0.0207070525493041	0.274120464472899
BLCA	CAediting_1280282	chr19_5909554_+	.	.	0.00171899190661231	0.30964278265169	.	.
LUAD	CAediting_1280282	chr19_5909554_+	.	.	0.0257509511247633	0.177404105175298	.	.
COAD	CAediting_1280282	chr19_5909554_+	.	.	0.0103616465898128	0.323350772091195	.	.
LUSC	CAediting_1280282	chr19_5909554_+	.	.	1.74790827689764e-05	0.369704430579056	.	.
PRAD	CAediting_1280282	chr19_5909554_+	.	.	4.93794774958645e-11	0.33431584619705	.	.
STAD	CAediting_1280282	chr19_5909554_+	.	.	0.00718897661909096	0.252687547877478	0.00021170869326699	0.343208999692428
KIRP	CAediting_1280282	chr19_5909554_+	.	.	4.31382159846999e-07	0.49829615163827	.	.
ESCA	CAediting_1280282	chr19_5909554_+	.	.	3.3740048219697e-05	0.528408880918018	.	.
SKCM	CAediting_1280282	chr19_5909554_+	.	.	0.000127634455480837	0.272989740172393	.	.
SARC	CAediting_1280282	chr19_5909554_+	.	.	0.000996418238415139	0.306921739383091	.	.
THYM	CAediting_1280282	chr19_5909554_+	.	.	0.00558190149054155	0.347974776913899	.	.
ESCA	CAediting_1280283	chr19_5909560_+	.	.	0.0398764341182968	0.25364957090945	.	.
SKCM	CAediting_1280283	chr19_5909560_+	.	.	0.00916868812033636	0.245195590307684	.	.
SARC	CAediting_1280283	chr19_5909560_+	0.0324973803219705	0.283655448566204	.	.	.	.
STAD	CAediting_1280284	chr19_5909573_+	.	.	.	.	0.0482693885511832	0.167238926230001
UCEC	CAediting_1280284	chr19_5909573_+	.	.	.	.	0.0453978165595891	0.182269693485478
OV	CAediting_1280284	chr19_5909573_+	.	.	0.0192023809022249	0.225038852466183	.	.
SKCM	CAediting_1280284	chr19_5909573_+	.	.	0.000149426178163998	0.343529684358293	.	.
SARC	CAediting_1280284	chr19_5909573_+	.	.	.	.	0.0268371350922289	0.270495032904531
BLCA	CAediting_1280289	chr19_5909609_+	.	.	0.0456536285821474	0.183587217395492	.	.
BRCA	CAediting_1280289	chr19_5909609_+	1.64601227124096e-06	0.197466761016246	.	.	.	.
LUAD	CAediting_1280289	chr19_5909609_+	0.0274813208101041	0.171657808054537	.	.	.	.
GBM	CAediting_1280289	chr19_5909609_+	0.0303933129619458	0.257156253162993	.	.	.	.
PRAD	CAediting_1280289	chr19_5909609_+	2.08038481280641e-07	0.352227584157204	.	.	.	.
THCA	CAediting_1280289	chr19_5909609_+	0.0048889649793229	0.217452094931662	.	.	.	.
UCEC	CAediting_1280289	chr19_5909609_+	0.00720070798171485	0.23289906554064	.	.	.	.
ESCA	CAediting_1280289	chr19_5909609_+	.	.	0.000467467849947587	0.343483986654838	.	.
PCPG	CAediting_1280289	chr19_5909609_+	0.000788010717728815	0.353332479133897	.	.	.	.
SARC	CAediting_1280289	chr19_5909609_+	0.00701413785919286	0.279296913781095	.	.	.	.
THYM	CAediting_1280289	chr19_5909609_+	1.91117368406379e-07	0.644496017737014	.	.	.	.
BRCA	CAediting_1280291	chr19_5909619_+	0.0134113643416082	0.12129523598401	.	.	.	.
LUAD	CAediting_1280291	chr19_5909619_+	0.0122127225419795	0.237134505729127	.	.	.	.
PRAD	CAediting_1280291	chr19_5909619_+	0.0077557945623567	0.172201024601319	.	.	.	.
ESCA	CAediting_1280291	chr19_5909619_+	.	.	0.0154067767520688	0.278856482997463	.	.
BRCA	CAediting_1280299	chr19_5909650_+	1.67551858881579e-06	0.223518325037802	.	.	.	.
LUSC	CAediting_1280299	chr19_5909650_+	.	.	0.0444544432855033	0.193808632361002	.	.
PRAD	CAediting_1280299	chr19_5909650_+	0.0239688112833775	0.188748685886592	.	.	.	.
UCEC	CAediting_1280299	chr19_5909650_+	7.23034118001865e-05	0.423908908875349	.	.	.	.
SKCM	CAediting_1280299	chr19_5909650_+	0.0180343299537104	0.212101224321854	.	.	.	.
BLCA	CAediting_1280306	chr19_5909710_+	8.14334118021263e-06	0.248792661998861	.	.	.	.
LGG	CAediting_1280306	chr19_5909710_+	0.00950465010886174	0.185768530315952	.	.	0.0042968728624384	0.204168605029977
BRCA	CAediting_1280306	chr19_5909710_+	3.30545139457375e-05	0.132871165729836	.	.	.	.
LIHC	CAediting_1280306	chr19_5909710_+	0.0151195402072721	0.221340848075047	.	.	0.0268618057114769	0.202091367103663
CESC	CAediting_1280306	chr19_5909710_+	0.00240378986380703	0.24366980829561	0.0237594847384265	0.182747266031111	.	.
LUAD	CAediting_1280306	chr19_5909710_+	.	.	0.00556322044609157	0.163835999509513	.	.
LUSC	CAediting_1280306	chr19_5909710_+	0.000153291412979378	0.211058466984117	0.00122563460264562	0.180790439915302	.	.
GBM	CAediting_1280306	chr19_5909710_+	0.00159514612883057	0.329864028038602	.	.	.	.
PRAD	CAediting_1280306	chr19_5909710_+	7.9784383490249e-12	0.304247762021411	8.81571960559827e-05	0.177275181333698	0.00886056917643824	0.118857490458294
STAD	CAediting_1280306	chr19_5909710_+	.	.	1.37416371790647e-07	0.290212352349822	.	.
THCA	CAediting_1280306	chr19_5909710_+	0.00013715489328405	0.18813557084445	.	.	.	.
KIRC	CAediting_1280306	chr19_5909710_+	0.000517859587312338	0.239211221612156	0.00904937009198002	0.181015228335047	.	.
UCEC	CAediting_1280306	chr19_5909710_+	1.20605691152557e-06	0.248576367213626	.	.	.	.
KIRP	CAediting_1280306	chr19_5909710_+	0.00208042059913672	0.241654429967968	.	.	.	.
ESCA	CAediting_1280306	chr19_5909710_+	0.039617483198831	0.165477888177806	0.0363038445393374	0.168315441352802	.	.
OV	CAediting_1280306	chr19_5909710_+	.	.	0.00521381102981259	0.144562133761207	.	.
PCPG	CAediting_1280306	chr19_5909710_+	0.000619800395623727	0.379102278424785	0.00744578211913028	0.300825546921359	.	.
SKCM	CAediting_1280306	chr19_5909710_+	0.0236677703035641	0.125486825593723	0.0337213697116564	0.117827765137653	.	.
MESO	CAediting_1280306	chr19_5909710_+	0.0366886190959569	0.277412061660066	0.0218229479059703	0.303298343859631	.	.
SARC	CAediting_1280306	chr19_5909710_+	0.00155702192913016	0.254483600518448	.	.	.	.
THYM	CAediting_1280306	chr19_5909710_+	4.18428126948963e-05	0.383517733956914	.	.	.	.
BLCA	CAediting_1280307	chr19_5909711_+	1.16973303605392e-05	0.254243869860942	.	.	.	.
LGG	CAediting_1280307	chr19_5909711_+	0.0224887432743358	0.16463951733495	.	.	0.00655279663188343	0.19558780439585
BRCA	CAediting_1280307	chr19_5909711_+	5.45115678136753e-06	0.148068461637146	.	.	.	.
CESC	CAediting_1280307	chr19_5909711_+	0.0019751035949799	0.261163581473351	0.0234679651229662	0.192811981549296	.	.
LUAD	CAediting_1280307	chr19_5909711_+	.	.	0.00164906890534624	0.194618558848108	.	.
LUSC	CAediting_1280307	chr19_5909711_+	7.24193133145098e-05	0.237377254747462	0.00010089508878574	0.232738747941538	.	.
GBM	CAediting_1280307	chr19_5909711_+	0.00218699188955837	0.341886009283928	.	.	.	.
PRAD	CAediting_1280307	chr19_5909711_+	8.58490361161672e-17	0.368189105673548	1.18017790240189e-05	0.198907218117422	0.0441293363206317	0.0921114473385106
STAD	CAediting_1280307	chr19_5909711_+	.	.	4.41557203626326e-05	0.233912202113121	.	.
THCA	CAediting_1280307	chr19_5909711_+	1.13422767317792e-05	0.22308584687466	.	.	.	.
KIRC	CAediting_1280307	chr19_5909711_+	1.82802888261351e-05	0.304643909587436	0.00357401164412451	0.209838735085393	.	.
UCEC	CAediting_1280307	chr19_5909711_+	2.38320285539601e-11	0.360006293995193	0.0346945261878164	0.117375896348422	.	.
KIRP	CAediting_1280307	chr19_5909711_+	0.0074003391756469	0.215042268910647	.	.	.	.
ESCA	CAediting_1280307	chr19_5909711_+	.	.	0.00113835357344669	0.265801090419379	.	.
LAML	CAediting_1280307	chr19_5909711_+	0.0189453432748109	0.225509393145713	.	.	.	.
OV	CAediting_1280307	chr19_5909711_+	0.00013453161651634	0.198532041664655	6.59178842922899e-07	0.256802480430973	.	.
PAAD	CAediting_1280307	chr19_5909711_+	0.0336396808450009	0.203687231782822	.	.	.	.
PCPG	CAediting_1280307	chr19_5909711_+	0.000172988197521561	0.407882869401706	0.0179872054840004	0.263958199384436	.	.
SKCM	CAediting_1280307	chr19_5909711_+	0.0024079187288651	0.174013589620351	0.00827850188728317	0.151692217890575	.	.
SARC	CAediting_1280307	chr19_5909711_+	1.13988755045908e-05	0.352118485580457	.	.	.	.
THYM	CAediting_1280307	chr19_5909711_+	9.37548453360142e-10	0.555439994531651	.	.	0.000539067213962523	0.333592300896622
LGG	CAediting_1280316	chr19_5909772_+	.	.	5.67094646684219e-05	0.237783213244924	0.0104182261207233	0.152598240644311
BRCA	CAediting_1280316	chr19_5909772_+	0.000155761017012159	0.127795796137336	0.00377516445305062	0.0980437559876609	.	.
CESC	CAediting_1280316	chr19_5909772_+	0.00135771652320882	0.280205560999535	.	.	.	.
LUAD	CAediting_1280316	chr19_5909772_+	.	.	0.000344162351960857	0.219493125486738	0.0473859577484556	0.122623550174339
COAD	CAediting_1280316	chr19_5909772_+	0.0014032874214097	0.295683288820587	0.00050851024451496	0.320479519072504	.	.
LUSC	CAediting_1280316	chr19_5909772_+	0.00669465041996521	0.166201736975209	2.82133491652749e-07	0.309141791111891	.	.
GBM	CAediting_1280316	chr19_5909772_+	0.024555790565346	0.230607093344989	.	.	.	.
PRAD	CAediting_1280316	chr19_5909772_+	6.67658040166394e-07	0.228072387941654	1.3067134664573e-08	0.259802844240724	.	.
STAD	CAediting_1280316	chr19_5909772_+	.	.	1.8184838148195e-10	0.363708459173459	.	.
THCA	CAediting_1280316	chr19_5909772_+	2.38475484938347e-05	0.216902844891963	.	.	.	.
KIRC	CAediting_1280316	chr19_5909772_+	0.00121446051818992	0.220257423445763	0.00205255846646351	0.210084890526607	.	.
UCEC	CAediting_1280316	chr19_5909772_+	0.0036978472492401	0.169086294915635	.	.	.	.
KIRP	CAediting_1280316	chr19_5909772_+	.	.	7.03431899828817e-05	0.297507562591259	.	.
ESCA	CAediting_1280316	chr19_5909772_+	.	.	0.00119760573612235	0.26919174341141	.	.
OV	CAediting_1280316	chr19_5909772_+	.	.	0.000612929794141739	0.187902077888502	.	.
PAAD	CAediting_1280316	chr19_5909772_+	0.0164476797774366	0.22427251595333	0.000662146934782957	0.314233443590356	.	.
PCPG	CAediting_1280316	chr19_5909772_+	0.000353127665315188	0.326143505903375	0.00161820200613259	0.28955087433918	.	.
SKCM	CAediting_1280316	chr19_5909772_+	.	.	3.00696736150342e-05	0.2335332477761	.	.
UVM	CAediting_1280316	chr19_5909772_+	.	.	0.000124194825868448	0.490502404101623	.	.
SARC	CAediting_1280316	chr19_5909772_+	0.000832721540097148	0.253954118259786	0.00408054737059994	0.21919426835687	.	.
THYM	CAediting_1280316	chr19_5909772_+	9.58066040474813e-07	0.458954529770556	0.00151105637293619	0.307246690188689	.	.
BRCA	CAediting_1280317	chr19_5909773_+	4.74284171166893e-10	0.239677253763172	.	.	.	.
CESC	CAediting_1280317	chr19_5909773_+	0.000362060486109022	0.396135818429891	.	.	.	.
PRAD	CAediting_1280317	chr19_5909773_+	2.91763157496574e-10	0.320516826941708	0.000251881854104559	0.189463785185406	.	.
HNSC	CAediting_1280317	chr19_5909773_+	0.0385423408688883	0.234777794197308	.	.	.	.
UCEC	CAediting_1280317	chr19_5909773_+	0.001551351378343	0.2223773410594	.	.	.	.
KIRP	CAediting_1280317	chr19_5909773_+	0.0197078527914741	0.234068183328124	.	.	.	.
ESCA	CAediting_1280317	chr19_5909773_+	0.0363951987720028	0.201622814146493	.	.	.	.
OV	CAediting_1280317	chr19_5909773_+	.	.	0.0395500867776199	0.145687770255325	.	.
PAAD	CAediting_1280317	chr19_5909773_+	.	.	0.0253846976646395	0.251464942115615	.	.
SKCM	CAediting_1280317	chr19_5909773_+	.	.	0.00368135520514266	0.200056066848734	.	.
SARC	CAediting_1280317	chr19_5909773_+	0.00343189214825166	0.256804358307594	.	.	.	.
THYM	CAediting_1280317	chr19_5909773_+	4.72605723515453e-11	0.657279735013335	.	.	0.017872437568507	0.265872002636722
BRCA	CAediting_1280323	chr19_5910414_+	0.0249265370310441	0.18369677217015	.	.	.	.
LGG	CAediting_1280351	chr19_5910615_+	0.0227266804879046	0.291336476869076	.	.	.	.
BRCA	CAediting_1280351	chr19_5910615_+	4.58581437449318e-05	0.272985949423206	.	.	.	.
PRAD	CAediting_1280351	chr19_5910615_+	0.0284814227307902	0.196786081626857	.	.	.	.
UCEC	CAediting_1280351	chr19_5910615_+	8.22084047280863e-05	0.436099739576243	.	.	.	.

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Relation with cancer stages for VMAC

Correlation between Cancer stages and RNA editing frequency

Cancer	Stage_type	CAeditomID	position	P-val	Coeff.
CESC	clinical_stage	CAediting_1280317	chr19_5909773_+	0.00901817414845561	0.299605757968665
KIRP	pathologic_stage	CAediting_1280282	chr19_5909554_+	0.0379898488198632	-0.224173287218173
LIHC	pathologic_stage	CAediting_1280291	chr19_5909619_+	0.0015262254889547	0.400359736152131
LIHC	pathologic_stage	CAediting_1280306	chr19_5909710_+	0.014750580619212	-0.228880773075895
LIHC	pathologic_stage	CAediting_1280316	chr19_5909772_+	0.0406452268468989	-0.187968055636725
LIHC	pathologic_stage	CAediting_1280317	chr19_5909773_+	0.0399199293795991	-0.233182262227309
LUSC	pathologic_stage	CAediting_1280307	chr19_5909711_+	0.0421882345703444	0.12351244810052
LUSC	pathologic_stage	CAediting_1280316	chr19_5909772_+	0.0414224735133456	0.126086552894913
OV	clinical_stage	CAediting_1280275	chr19_5909498_+	0.0265554977056123	-0.174275513151697
OV	clinical_stage	CAediting_1280289	chr19_5909609_+	0.0470682534114645	-0.160280924091459
OV	clinical_stage	CAediting_1280299	chr19_5909650_+	0.0149220044827094	-0.300743202331966
PAAD	pathologic_stage	CAediting_1280307	chr19_5909711_+	0.0190891741833219	-0.225245419001059
STAD	pathologic_stage	CAediting_1280283	chr19_5909560_+	0.00581004803271897	0.275337946415645
THCA	pathologic_stage	CAediting_1280284	chr19_5909573_+	0.0342779153717847	0.186549166937158

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Relation with survival for VMAC

Correlation between RNA editing and survival

Cancer	CAeditomID	position	KMpvalue	Coxpvalue	CoxHR
BLCA	CAediting_1280282	chr19_5909554_+	0.0385425661041601	0.0231483	6.83549e-05
LGG	CAediting_1280289	chr19_5909609_+	0.0125896229604568	0.0492993	0.0378023
KIRC	CAediting_1280281	chr19_5909553_+	0.000433738503027081	0.00679711	0.00156949
KIRP	CAediting_1280289	chr19_5909609_+	0.00786156748553724	0.0470118	219746
SKCM	CAediting_1280283	chr19_5909560_+	0.0128588639208045	0.00929326	0.00121241
SKCM	CAediting_1280306	chr19_5909710_+	0.046318229890556	0.00160781	0.1828

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RelatedDrugs for VMAC

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for VMAC

Diseases associated with this gene.
(DisGeNet 7.0)

Gene

Disease ID

Disease name

# pubmeds

Source

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene