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Editing gene: LAMTOR4 (CAeditome ID:389541)

Gene summary for LAMTOR4

Gene summary

Gene information	Gene symbol	LAMTOR4
	Gene ID	389541
	Gene name	late endosomal/lysosomal adaptor, MAPK and MTOR activator 4
	Synonyms	C7orf59
	Cytomap	7q22.1
	Type of gene	protein-coding
	Description	ragulator complex protein LAMTOR4UPF0539 protein C7orf59late endosomal/lysosomal adaptor and MAPK and MTOR activator 4
	Modification date	20210518
	UniProtAcc	Q0VGL1
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene	GO ID	GO term	PubMed ID
LAMTOR4	GO:0005085	Ragulator complex protein LAMTOR4	22980980
LAMTOR4	GO:0060090	Ragulator complex protein LAMTOR4	22980980
LAMTOR4	GO:0005764	Ragulator complex protein LAMTOR4	22980980
LAMTOR4	GO:0043231	Ragulator complex protein LAMTOR4	0000052
LAMTOR4	GO:0071986	Ragulator complex protein LAMTOR4	22980980

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RNA A-to-I events for LAMTOR4

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000188186.9

RNA A-to-I editing events in Cancer.

CAediting_579952(100149796, +), CAediting_579953(100149819, +), CAediting_579954(100149856, +), CAediting_579955(100149875, +), CAediting_579956(100149876, +), CAediting_579957(100149893, +), CAediting_579958(100149905, +), CAediting_579959(100149917, +), CAediting_579960(100149942, +), CAediting_579961(100149957, +), CAediting_579962(100149960, +), CAediting_579963(100149963, +), CAediting_579964(100149964, +), CAediting_579965(100149982, +), CAediting_579966(100149986, +), CAediting_579967(100149997, +), CAediting_579968(100150011, +), CAediting_579969(100150020, +), CAediting_579970(100150029, +), CAediting_579971(100150039, +), CAediting_579972(100150378, +), CAediting_579973(100150730, +), CAediting_579974(100150731, +), CAediting_579975(100150747, +), CAediting_579976(100150752, +), CAediting_579977(100150774, +), CAediting_579978(100150798, +), CAediting_579979(100150807, +), CAediting_579980(100150808, +), CAediting_579981(100150846, +), CAediting_579982(100150868, +), CAediting_579983(100150874, +), CAediting_579984(100150878, +), CAediting_579985(100150886, +), CAediting_579986(100150895, +), CAediting_579987(100150898, +), CAediting_579988(100150901, +), CAediting_579989(100150909, +), CAediting_579990(100150910, +), CAediting_579991(100150917, +), CAediting_579992(100150941, +), CAediting_579993(100150944, +), CAediting_579994(100150946, +), CAediting_579995(100150949, +), CAediting_579996(100150959, +), CAediting_579997(100150976, +), CAediting_579998(100151098, +), CAediting_579999(100151144, +), CAediting_580000(100151174, +), CAediting_580001(100151175, +), CAediting_580002(100151192, +), CAediting_580003(100151204, +), CAediting_580004(100151208, +), CAediting_580005(100151214, +), CAediting_580006(100151216, +), CAediting_580007(100151249, +), CAediting_580008(100151258, +), CAediting_580009(100151264, +), CAediting_580010(100151275, +), CAediting_580011(100151297, +), CAediting_580012(100151309, +), CAediting_580013(100151325, +), CAediting_580014(100151452, +), CAediting_580015(100151463, +), CAediting_580016(100151469, +), CAediting_580017(100151488, +), CAediting_580018(100151518, +), CAediting_580019(100151528, +), CAediting_580020(100151573, +), CAediting_580021(100151587, +), CAediting_580022(100151590, +), CAediting_580023(100151595, +), CAediting_580024(100151599, +), CAediting_580025(100151648, +), CAediting_580026(100151649, +), CAediting_580027(100151650, +), CAediting_580028(100151659, +), CAediting_580029(100151662, +), CAediting_580030(100151716, +), CAediting_580031(100151717, +), CAediting_580032(100151719, +), CAediting_580033(100151721, +), CAediting_580034(100151723, +), CAediting_580035(100151783, +), CAediting_580036(100151796, +), CAediting_580037(100151797, +), CAediting_580038(100151800, +), CAediting_580039(100151814, +), CAediting_580040(100151823, +), CAediting_580041(100151826, +), CAediting_580042(100151827, +), CAediting_580043(100151830, +), CAediting_580044(100151832, +), CAediting_580045(100151833, +), CAediting_580046(100151836, +), CAediting_580047(100151838, +), CAediting_580048(100151924, +), CAediting_580049(100151926, +), CAediting_580050(100151964, +), CAediting_580051(100151966, +), CAediting_580052(100151973, +), CAediting_580053(100151975, +), CAediting_580054(100151978, +), CAediting_580055(100152146, +), CAediting_580056(100152154, +), CAediting_580057(100152155, +), CAediting_580058(100152163, +), CAediting_580059(100152195, +), CAediting_580060(100152209, +), CAediting_580061(100152211, +), CAediting_580062(100152219, +), CAediting_580063(100152223, +), CAediting_580064(100152224, +), CAediting_580065(100152248, +), CAediting_580066(100152250, +), CAediting_580067(100152251, +), CAediting_580068(100152255, +), CAediting_580069(100152268, +), CAediting_580070(100152271, +), CAediting_580071(100152273, +), CAediting_580072(100152281, +), CAediting_580073(100152282, +), CAediting_580074(100152287, +), CAediting_580075(100152304, +), CAediting_580076(100152308, +), CAediting_580077(100152313, +), CAediting_580078(100152314, +), CAediting_580079(100152322, +), CAediting_580080(100152323, +), CAediting_580081(100152334, +), CAediting_580082(100152351, +), CAediting_580083(100152354, +), CAediting_580084(100152402, +), CAediting_580085(100152403, +), CAediting_580086(100152409, +), CAediting_580087(100152411, +), CAediting_580088(100152414, +), CAediting_580089(100152425, +), CAediting_580090(100152876, +), CAediting_580091(100152890, +), CAediting_580092(100152898, +), CAediting_580093(100152921, +), CAediting_580094(100152929, +), CAediting_580095(100152945, +), CAediting_580096(100152966, +), CAediting_580097(100152974, +), CAediting_580098(100152975, +), CAediting_580099(100152976, +), CAediting_580100(100152977, +), CAediting_580101(100152992, +), CAediting_580102(100152993, +), CAediting_580103(100152994, +), CAediting_580104(100152995, +), CAediting_580105(100152997, +), CAediting_580106(100153000, +), CAediting_580107(100153002, +), CAediting_580108(100153003, +), CAediting_580109(100153004, +), CAediting_580110(100153007, +), CAediting_580111(100153039, +), CAediting_580112(100153040, +), CAediting_580113(100153049, +), CAediting_580114(100153056, +), CAediting_580115(100153062, +), CAediting_580116(100153066, +), CAediting_580117(100153075, +), CAediting_580118(100153096, +), CAediting_580119(100153114, +), CAediting_580120(100153126, +), CAediting_580121(100153129, +), CAediting_580122(100153132, +),

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RNA editing positional annotations for LAMTOR4 using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_579952	chr7_100149796_+	ncRNA_exonic
CAediting_579953	chr7_100149819_+	ncRNA_exonic
CAediting_579954	chr7_100149856_+	ncRNA_exonic
CAediting_579955	chr7_100149875_+	ncRNA_exonic
CAediting_579956	chr7_100149876_+	ncRNA_exonic
CAediting_579957	chr7_100149893_+	intronic
CAediting_579958	chr7_100149905_+	intronic
CAediting_579959	chr7_100149917_+	intronic
CAediting_579960	chr7_100149942_+	intronic
CAediting_579961	chr7_100149957_+	intronic
CAediting_579962	chr7_100149960_+	intronic
CAediting_579963	chr7_100149963_+	intronic
CAediting_579964	chr7_100149964_+	intronic
CAediting_579965	chr7_100149982_+	intronic
CAediting_579966	chr7_100149986_+	intronic
CAediting_579967	chr7_100149997_+	intronic
CAediting_579968	chr7_100150011_+	intronic
CAediting_579969	chr7_100150020_+	intronic
CAediting_579970	chr7_100150029_+	intronic
CAediting_579971	chr7_100150039_+	intronic
CAediting_579972	chr7_100150378_+	intronic
CAediting_579973	chr7_100150730_+	intronic
CAediting_579974	chr7_100150731_+	intronic
CAediting_579975	chr7_100150747_+	intronic
CAediting_579976	chr7_100150752_+	intronic
CAediting_579977	chr7_100150774_+	intronic
CAediting_579978	chr7_100150798_+	intronic
CAediting_579979	chr7_100150807_+	intronic
CAediting_579980	chr7_100150808_+	intronic
CAediting_579981	chr7_100150846_+	intronic
CAediting_579982	chr7_100150868_+	intronic
CAediting_579983	chr7_100150874_+	intronic
CAediting_579984	chr7_100150878_+	intronic
CAediting_579985	chr7_100150886_+	intronic
CAediting_579986	chr7_100150895_+	intronic
CAediting_579987	chr7_100150898_+	intronic
CAediting_579988	chr7_100150901_+	intronic
CAediting_579989	chr7_100150909_+	intronic
CAediting_579990	chr7_100150910_+	intronic
CAediting_579991	chr7_100150917_+	intronic
CAediting_579992	chr7_100150941_+	intronic
CAediting_579993	chr7_100150944_+	intronic
CAediting_579994	chr7_100150946_+	intronic
CAediting_579995	chr7_100150949_+	intronic
CAediting_579996	chr7_100150959_+	intronic
CAediting_579997	chr7_100150976_+	intronic
CAediting_579998	chr7_100151098_+	intronic
CAediting_579999	chr7_100151144_+	intronic
CAediting_580000	chr7_100151174_+	intronic
CAediting_580001	chr7_100151175_+	intronic
CAediting_580002	chr7_100151192_+	intronic
CAediting_580003	chr7_100151204_+	intronic
CAediting_580004	chr7_100151208_+	intronic
CAediting_580005	chr7_100151214_+	intronic
CAediting_580006	chr7_100151216_+	intronic
CAediting_580007	chr7_100151249_+	intronic
CAediting_580008	chr7_100151258_+	intronic
CAediting_580009	chr7_100151264_+	intronic
CAediting_580010	chr7_100151275_+	intronic
CAediting_580011	chr7_100151297_+	intronic
CAediting_580012	chr7_100151309_+	intronic
CAediting_580013	chr7_100151325_+	intronic
CAediting_580014	chr7_100151452_+	intronic
CAediting_580015	chr7_100151463_+	intronic
CAediting_580016	chr7_100151469_+	intronic
CAediting_580017	chr7_100151488_+	intronic
CAediting_580018	chr7_100151518_+	intronic
CAediting_580019	chr7_100151528_+	intronic
CAediting_580020	chr7_100151573_+	intronic
CAediting_580021	chr7_100151587_+	intronic
CAediting_580022	chr7_100151590_+	intronic
CAediting_580023	chr7_100151595_+	intronic
CAediting_580024	chr7_100151599_+	intronic
CAediting_580025	chr7_100151648_+	intronic
CAediting_580026	chr7_100151649_+	intronic
CAediting_580027	chr7_100151650_+	intronic
CAediting_580028	chr7_100151659_+	intronic
CAediting_580029	chr7_100151662_+	intronic
CAediting_580030	chr7_100151716_+	intronic
CAediting_580031	chr7_100151717_+	intronic
CAediting_580032	chr7_100151719_+	intronic
CAediting_580033	chr7_100151721_+	intronic
CAediting_580034	chr7_100151723_+	intronic
CAediting_580035	chr7_100151783_+	intronic
CAediting_580036	chr7_100151796_+	intronic
CAediting_580037	chr7_100151797_+	intronic
CAediting_580038	chr7_100151800_+	intronic
CAediting_580039	chr7_100151814_+	intronic
CAediting_580040	chr7_100151823_+	intronic
CAediting_580041	chr7_100151826_+	intronic
CAediting_580042	chr7_100151827_+	intronic
CAediting_580043	chr7_100151830_+	intronic
CAediting_580044	chr7_100151832_+	intronic
CAediting_580045	chr7_100151833_+	intronic
CAediting_580046	chr7_100151836_+	intronic
CAediting_580047	chr7_100151838_+	intronic
CAediting_580048	chr7_100151924_+	intronic
CAediting_580049	chr7_100151926_+	intronic
CAediting_580050	chr7_100151964_+	intronic
CAediting_580051	chr7_100151966_+	intronic
CAediting_580052	chr7_100151973_+	intronic
CAediting_580053	chr7_100151975_+	intronic
CAediting_580054	chr7_100151978_+	intronic
CAediting_580055	chr7_100152146_+	intronic
CAediting_580056	chr7_100152154_+	intronic
CAediting_580057	chr7_100152155_+	intronic
CAediting_580058	chr7_100152163_+	intronic
CAediting_580059	chr7_100152195_+	intronic
CAediting_580060	chr7_100152209_+	intronic
CAediting_580061	chr7_100152211_+	intronic
CAediting_580062	chr7_100152219_+	intronic
CAediting_580063	chr7_100152223_+	intronic
CAediting_580064	chr7_100152224_+	intronic
CAediting_580065	chr7_100152248_+	intronic
CAediting_580066	chr7_100152250_+	intronic
CAediting_580067	chr7_100152251_+	intronic
CAediting_580068	chr7_100152255_+	intronic
CAediting_580069	chr7_100152268_+	intronic
CAediting_580070	chr7_100152271_+	intronic
CAediting_580071	chr7_100152273_+	intronic
CAediting_580072	chr7_100152281_+	intronic
CAediting_580073	chr7_100152282_+	intronic
CAediting_580074	chr7_100152287_+	intronic
CAediting_580075	chr7_100152304_+	intronic
CAediting_580076	chr7_100152308_+	intronic
CAediting_580077	chr7_100152313_+	intronic
CAediting_580078	chr7_100152314_+	intronic
CAediting_580079	chr7_100152322_+	intronic
CAediting_580080	chr7_100152323_+	intronic
CAediting_580081	chr7_100152334_+	intronic
CAediting_580082	chr7_100152351_+	intronic
CAediting_580083	chr7_100152354_+	intronic
CAediting_580084	chr7_100152402_+	intronic
CAediting_580085	chr7_100152403_+	intronic
CAediting_580086	chr7_100152409_+	intronic
CAediting_580087	chr7_100152411_+	intronic
CAediting_580088	chr7_100152414_+	intronic
CAediting_580089	chr7_100152425_+	intronic
CAediting_580090	chr7_100152876_+	ncRNA_intronic
CAediting_580091	chr7_100152890_+	ncRNA_intronic
CAediting_580092	chr7_100152898_+	ncRNA_intronic
CAediting_580093	chr7_100152921_+	ncRNA_intronic
CAediting_580094	chr7_100152929_+	ncRNA_intronic
CAediting_580095	chr7_100152945_+	ncRNA_intronic
CAediting_580096	chr7_100152966_+	ncRNA_intronic
CAediting_580097	chr7_100152974_+	ncRNA_intronic
CAediting_580098	chr7_100152975_+	ncRNA_intronic
CAediting_580099	chr7_100152976_+	ncRNA_intronic
CAediting_580100	chr7_100152977_+	ncRNA_intronic
CAediting_580101	chr7_100152992_+	ncRNA_intronic
CAediting_580102	chr7_100152993_+	ncRNA_intronic
CAediting_580103	chr7_100152994_+	ncRNA_intronic
CAediting_580104	chr7_100152995_+	ncRNA_intronic
CAediting_580105	chr7_100152997_+	ncRNA_intronic
CAediting_580106	chr7_100153000_+	ncRNA_intronic
CAediting_580107	chr7_100153002_+	ncRNA_intronic
CAediting_580108	chr7_100153003_+	ncRNA_intronic
CAediting_580109	chr7_100153004_+	ncRNA_intronic
CAediting_580110	chr7_100153007_+	ncRNA_intronic
CAediting_580111	chr7_100153039_+	ncRNA_intronic
CAediting_580112	chr7_100153040_+	ncRNA_intronic
CAediting_580113	chr7_100153049_+	ncRNA_intronic
CAediting_580114	chr7_100153056_+	ncRNA_intronic
CAediting_580115	chr7_100153062_+	ncRNA_intronic
CAediting_580116	chr7_100153066_+	ncRNA_intronic
CAediting_580117	chr7_100153075_+	ncRNA_intronic
CAediting_580118	chr7_100153096_+	ncRNA_intronic
CAediting_580119	chr7_100153114_+	ncRNA_intronic
CAediting_580120	chr7_100153126_+	ncRNA_intronic
CAediting_580121	chr7_100153129_+	ncRNA_intronic
CAediting_580122	chr7_100153132_+	ncRNA_intronic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_579952	chr7_100149796_+	SINE	Alu	AluSq
CAediting_579953	chr7_100149819_+	SINE	Alu	AluSq
CAediting_579954	chr7_100149856_+	SINE	Alu	AluSq
CAediting_579955	chr7_100149875_+	SINE	Alu	AluSq
CAediting_579956	chr7_100149876_+	SINE	Alu	AluSq
CAediting_579957	chr7_100149893_+	SINE	Alu	AluSq
CAediting_579958	chr7_100149905_+	SINE	Alu	AluSq
CAediting_579959	chr7_100149917_+	SINE	Alu	AluSq
CAediting_579960	chr7_100149942_+	SINE	Alu	AluSq
CAediting_579961	chr7_100149957_+	SINE	Alu	AluSq
CAediting_579962	chr7_100149960_+	SINE	Alu	AluSq
CAediting_579963	chr7_100149963_+	SINE	Alu	AluSq
CAediting_579964	chr7_100149964_+	SINE	Alu	AluSq
CAediting_579965	chr7_100149982_+	SINE	Alu	AluSq
CAediting_579966	chr7_100149986_+	SINE	Alu	AluSq
CAediting_579967	chr7_100149997_+	SINE	Alu	AluSq
CAediting_579968	chr7_100150011_+	SINE	Alu	AluSq
CAediting_579969	chr7_100150020_+	SINE	Alu	AluSq
CAediting_579970	chr7_100150029_+	SINE	Alu	AluSq
CAediting_579971	chr7_100150039_+	SINE	Alu	AluSq
CAediting_579973	chr7_100150730_+	SINE	Alu	AluY
CAediting_579974	chr7_100150731_+	SINE	Alu	AluY
CAediting_579975	chr7_100150747_+	SINE	Alu	AluY
CAediting_579976	chr7_100150752_+	SINE	Alu	AluY
CAediting_579977	chr7_100150774_+	SINE	Alu	AluY
CAediting_579978	chr7_100150798_+	SINE	Alu	AluY
CAediting_579979	chr7_100150807_+	SINE	Alu	AluY
CAediting_579980	chr7_100150808_+	SINE	Alu	AluY
CAediting_579981	chr7_100150846_+	SINE	Alu	AluY
CAediting_579982	chr7_100150868_+	SINE	Alu	AluY
CAediting_579983	chr7_100150874_+	SINE	Alu	AluY
CAediting_579984	chr7_100150878_+	SINE	Alu	AluY
CAediting_579985	chr7_100150886_+	SINE	Alu	AluY
CAediting_579986	chr7_100150895_+	SINE	Alu	AluY
CAediting_579987	chr7_100150898_+	SINE	Alu	AluY
CAediting_579988	chr7_100150901_+	SINE	Alu	AluY
CAediting_579989	chr7_100150909_+	SINE	Alu	AluY
CAediting_579990	chr7_100150910_+	SINE	Alu	AluY
CAediting_579991	chr7_100150917_+	SINE	Alu	AluY
CAediting_579992	chr7_100150941_+	SINE	Alu	AluY
CAediting_579993	chr7_100150944_+	SINE	Alu	AluY
CAediting_579994	chr7_100150946_+	SINE	Alu	AluY
CAediting_579995	chr7_100150949_+	SINE	Alu	AluY
CAediting_579996	chr7_100150959_+	SINE	Alu	AluY
CAediting_579997	chr7_100150976_+	SINE	Alu	AluY
CAediting_579998	chr7_100151098_+	SINE	Alu	AluSg
CAediting_579999	chr7_100151144_+	SINE	Alu	AluSg
CAediting_580000	chr7_100151174_+	SINE	Alu	AluSg
CAediting_580001	chr7_100151175_+	SINE	Alu	AluSg
CAediting_580002	chr7_100151192_+	SINE	Alu	AluSg
CAediting_580003	chr7_100151204_+	SINE	Alu	AluSg
CAediting_580004	chr7_100151208_+	SINE	Alu	AluSg
CAediting_580005	chr7_100151214_+	SINE	Alu	AluSg
CAediting_580006	chr7_100151216_+	SINE	Alu	AluSg
CAediting_580007	chr7_100151249_+	SINE	Alu	AluSg
CAediting_580008	chr7_100151258_+	SINE	Alu	AluSg
CAediting_580009	chr7_100151264_+	SINE	Alu	AluSg
CAediting_580010	chr7_100151275_+	SINE	Alu	AluSg
CAediting_580011	chr7_100151297_+	SINE	Alu	AluSg
CAediting_580012	chr7_100151309_+	SINE	Alu	AluSg
CAediting_580013	chr7_100151325_+	SINE	Alu	AluSg
CAediting_580014	chr7_100151452_+	SINE	Alu	AluY
CAediting_580015	chr7_100151463_+	SINE	Alu	AluY
CAediting_580016	chr7_100151469_+	SINE	Alu	AluY
CAediting_580017	chr7_100151488_+	SINE	Alu	AluY
CAediting_580018	chr7_100151518_+	SINE	Alu	AluY
CAediting_580019	chr7_100151528_+	SINE	Alu	AluY
CAediting_580020	chr7_100151573_+	SINE	Alu	AluY
CAediting_580021	chr7_100151587_+	SINE	Alu	AluY
CAediting_580022	chr7_100151590_+	SINE	Alu	AluY
CAediting_580023	chr7_100151595_+	SINE	Alu	AluY
CAediting_580024	chr7_100151599_+	SINE	Alu	AluY
CAediting_580025	chr7_100151648_+	SINE	Alu	AluY
CAediting_580026	chr7_100151649_+	SINE	Alu	AluY
CAediting_580027	chr7_100151650_+	SINE	Alu	AluY
CAediting_580028	chr7_100151659_+	SINE	Alu	AluY
CAediting_580029	chr7_100151662_+	SINE	Alu	AluY
CAediting_580030	chr7_100151716_+	SINE	Alu	AluJr4
CAediting_580031	chr7_100151717_+	SINE	Alu	AluJr4
CAediting_580032	chr7_100151719_+	SINE	Alu	AluJr4
CAediting_580033	chr7_100151721_+	SINE	Alu	AluJr4
CAediting_580034	chr7_100151723_+	SINE	Alu	AluJr4
CAediting_580035	chr7_100151783_+	SINE	Alu	AluJr4
CAediting_580036	chr7_100151796_+	SINE	Alu	AluJr4
CAediting_580037	chr7_100151797_+	SINE	Alu	AluJr4
CAediting_580038	chr7_100151800_+	SINE	Alu	AluJr4
CAediting_580039	chr7_100151814_+	SINE	Alu	AluJr4
CAediting_580040	chr7_100151823_+	SINE	Alu	AluJr4
CAediting_580041	chr7_100151826_+	SINE	Alu	AluJr4
CAediting_580042	chr7_100151827_+	SINE	Alu	AluJr4
CAediting_580043	chr7_100151830_+	SINE	Alu	AluJr4
CAediting_580044	chr7_100151832_+	SINE	Alu	AluJr4
CAediting_580045	chr7_100151833_+	SINE	Alu	AluJr4
CAediting_580046	chr7_100151836_+	SINE	Alu	AluJr4
CAediting_580047	chr7_100151838_+	SINE	Alu	AluJr4
CAediting_580048	chr7_100151924_+	SINE	Alu	AluJr4
CAediting_580049	chr7_100151926_+	SINE	Alu	AluJr4
CAediting_580050	chr7_100151964_+	SINE	Alu	AluJr4
CAediting_580051	chr7_100151966_+	SINE	Alu	AluJr4
CAediting_580052	chr7_100151973_+	SINE	Alu	AluJr4
CAediting_580053	chr7_100151975_+	SINE	Alu	AluJr4
CAediting_580054	chr7_100151978_+	SINE	Alu	AluJr4
CAediting_580055	chr7_100152146_+	SINE	Alu	AluSz
CAediting_580056	chr7_100152154_+	SINE	Alu	AluSz
CAediting_580057	chr7_100152155_+	SINE	Alu	AluSz
CAediting_580058	chr7_100152163_+	SINE	Alu	AluSz
CAediting_580059	chr7_100152195_+	SINE	Alu	AluSz
CAediting_580060	chr7_100152209_+	SINE	Alu	AluSz
CAediting_580061	chr7_100152211_+	SINE	Alu	AluSz
CAediting_580062	chr7_100152219_+	SINE	Alu	AluSz
CAediting_580063	chr7_100152223_+	SINE	Alu	AluSz
CAediting_580064	chr7_100152224_+	SINE	Alu	AluSz
CAediting_580065	chr7_100152248_+	SINE	Alu	AluSz
CAediting_580066	chr7_100152250_+	SINE	Alu	AluSz
CAediting_580067	chr7_100152251_+	SINE	Alu	AluSz
CAediting_580068	chr7_100152255_+	SINE	Alu	AluSz
CAediting_580069	chr7_100152268_+	SINE	Alu	AluSz
CAediting_580070	chr7_100152271_+	SINE	Alu	AluSz
CAediting_580071	chr7_100152273_+	SINE	Alu	AluSz
CAediting_580072	chr7_100152281_+	SINE	Alu	AluSz
CAediting_580073	chr7_100152282_+	SINE	Alu	AluSz
CAediting_580074	chr7_100152287_+	SINE	Alu	AluSz
CAediting_580075	chr7_100152304_+	SINE	Alu	AluSz
CAediting_580076	chr7_100152308_+	SINE	Alu	AluSz
CAediting_580077	chr7_100152313_+	SINE	Alu	AluSz
CAediting_580078	chr7_100152314_+	SINE	Alu	AluSz
CAediting_580079	chr7_100152322_+	SINE	Alu	AluSz
CAediting_580080	chr7_100152323_+	SINE	Alu	AluSz
CAediting_580081	chr7_100152334_+	SINE	Alu	AluSz
CAediting_580082	chr7_100152351_+	SINE	Alu	AluSz
CAediting_580083	chr7_100152354_+	SINE	Alu	AluSz
CAediting_580084	chr7_100152402_+	SINE	Alu	AluSz
CAediting_580085	chr7_100152403_+	SINE	Alu	AluSz
CAediting_580086	chr7_100152409_+	SINE	Alu	AluSz
CAediting_580087	chr7_100152411_+	SINE	Alu	AluSz
CAediting_580088	chr7_100152414_+	SINE	Alu	AluSz
CAediting_580089	chr7_100152425_+	SINE	Alu	AluSz
CAediting_580090	chr7_100152876_+	SINE	Alu	AluSz
CAediting_580091	chr7_100152890_+	SINE	Alu	AluSz
CAediting_580092	chr7_100152898_+	SINE	Alu	AluSz
CAediting_580093	chr7_100152921_+	SINE	Alu	AluSz
CAediting_580094	chr7_100152929_+	SINE	Alu	AluSz
CAediting_580095	chr7_100152945_+	SINE	Alu	AluSz
CAediting_580096	chr7_100152966_+	SINE	Alu	AluSz
CAediting_580097	chr7_100152974_+	SINE	Alu	AluSz
CAediting_580098	chr7_100152975_+	SINE	Alu	AluSz
CAediting_580099	chr7_100152976_+	SINE	Alu	AluSz
CAediting_580100	chr7_100152977_+	SINE	Alu	AluSz
CAediting_580101	chr7_100152992_+	SINE	Alu	AluSz
CAediting_580102	chr7_100152993_+	SINE	Alu	AluSz
CAediting_580103	chr7_100152994_+	SINE	Alu	AluSz
CAediting_580104	chr7_100152995_+	SINE	Alu	AluSz
CAediting_580105	chr7_100152997_+	SINE	Alu	AluSz
CAediting_580106	chr7_100153000_+	SINE	Alu	AluSz
CAediting_580107	chr7_100153002_+	SINE	Alu	AluSz
CAediting_580108	chr7_100153003_+	SINE	Alu	AluSz
CAediting_580109	chr7_100153004_+	SINE	Alu	AluSz
CAediting_580110	chr7_100153007_+	SINE	Alu	AluSz
CAediting_580111	chr7_100153039_+	SINE	Alu	AluSz
CAediting_580112	chr7_100153040_+	SINE	Alu	AluSz
CAediting_580113	chr7_100153049_+	SINE	Alu	AluSz
CAediting_580114	chr7_100153056_+	SINE	Alu	AluSz
CAediting_580115	chr7_100153062_+	SINE	Alu	AluSz
CAediting_580116	chr7_100153066_+	SINE	Alu	AluSz
CAediting_580117	chr7_100153075_+	SINE	Alu	AluSz
CAediting_580118	chr7_100153096_+	SINE	Alu	AluSz
CAediting_580119	chr7_100153114_+	SINE	Alu	AluSz
CAediting_580120	chr7_100153126_+	SINE	Alu	AluSz
CAediting_580121	chr7_100153129_+	SINE	Alu	AluSz
CAediting_580122	chr7_100153132_+	SINE	Alu	AluSz

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RNA A-to-I editing events in the alternative splicing sites for LAMTOR4

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000188186.9.LAMTOR4.

Correlation between RNA A-to-I editing and PSI for ENSG00000188186.9.LAMTOR4.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for LAMTOR4

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for LAMTOR4

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for LAMTOR4

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_688081	chr9_63819627_+	ENSG00000188186.9	ENST00000341942	hsa-miR-4477b	100154172	100154178	7mer-m8	100154158	100154179	140	-14.42
CAediting_688081	chr9_63819627_+	ENSG00000188186.9	ENST00000474141	hsa-miR-4477b	100154172	100154178	7mer-m8	100154158	100154179	140	-14.42
CAediting_688081	chr9_63819627_+	ENSG00000188186.9	ENST00000460732	hsa-miR-4477b	100154172	100154178	7mer-m8	100154158	100154179	140	-14.42
CAediting_688081	chr9_63819627_+	ENSG00000188186.9	ENST00000468582	hsa-miR-4477b	100154172	100154178	7mer-m8	100154158	100154179	140	-14.42
CAediting_688081	chr9_63819627_+	ENSG00000188186.9	ENST00000488241	hsa-miR-4477b	100154172	100154178	7mer-m8	100154158	100154179	140	-14.42
CAediting_688081	chr9_63819627_+	ENSG00000188186.9	ENST00000473459	hsa-miR-4477b	100154172	100154178	7mer-m8	100154158	100154179	140	-14.42
CAediting_393	chr1_1167164_+	ENSG00000188186.9	ENST00000490633	hsa-miR-200b-3p	100155622	100155628	7mer-m8	100155608	100155629	140	-14.07
CAediting_1229414	chr17_67471546_+	ENSG00000188186.9	ENST00000441173	hsa-miR-548aa	100153866	100153872	7mer-m8	100153849	100153873	145	-15.41
CAediting_1229415	chr17_67471547_+	ENSG00000188186.9	ENST00000441173	hsa-miR-548aa	100153751	100153757	7mer-m8	100153735	100153758	156	-8.33
CAediting_86358	chr1_109598906_+	ENSG00000188186.9	ENST00000490633	hsa-miR-197-5p	100155615	100155621	7mer-m8	100155601	100155622	159	-26.64
CAediting_468389	chr6_31355314_-	ENSG00000188186.9	ENST00000490633	hsa-miR-6891-5p	100155802	100155807	6mer	100155792	100155811	147	-27.06
CAediting_468389	chr6_31355314_-	ENSG00000188186.9	ENST00000490633	hsa-miR-6891-5p	100155804	100155811	8mer-1a	100155792	100155811	147	-27.06
CAediting_1524209	chrX_134546392_-	ENSG00000188186.9	ENST00000490633	hsa-miR-503-5p	100155720	100155726	7mer-m8	100155704	100155727	151	-23.42

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_580943	chr7_100356700_+	ENSG00000188186.9	ENST00000441173	hsa-miR-6840-3p	100153832	100153838	7mer-m8	100153818	100153839	144	-20

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for LAMTOR4

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST	ENST type	RNA structure without RNA A-to-I editing.	RNA structure with RNA A-to-I editing.
ENST00000494136.1	retained_intron

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID	ENST	Editing_Position	MFE_withoneAI	MFE_withoutAI	MFE_withmultipleAI
CAediting_579952	ENST00000494136.1	chr7_100149796_+	-146.00	-146.60	-152.30
CAediting_579953	ENST00000494136.1	chr7_100149819_+	-149.90	-146.60	-152.30
CAediting_579954	ENST00000494136.1	chr7_100149856_+	-146.60	-146.60	-152.30
CAediting_579955	ENST00000494136.1	chr7_100149875_+	-148.00	-146.60	-152.30
CAediting_579956	ENST00000494136.1	chr7_100149876_+	-146.30	-146.60	-152.30

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Relation with ADAR for LAMTOR4

Correlation between ADAR gene expression and RNA editing frequency

Cancer

CAeditomID

position

ADAR1 (p-val)

ADAR1 (coeff.)

ADAR2 (p-val)

ADAR2 (coeff.)

ADAR3 (p-val)

ADAR3 (coeff.)

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Relation with cancer stages for LAMTOR4

Correlation between Cancer stages and RNA editing frequency

Cancer

Stage_type

CAeditomID

position

P-val

Coeff.

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Relation with survival for LAMTOR4

Correlation between RNA editing and survival

Cancer

CAeditomID

position

KMpvalue

Coxpvalue

CoxHR

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RelatedDrugs for LAMTOR4

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for LAMTOR4

Diseases associated with this gene.
(DisGeNet 7.0)

Gene

Disease ID

Disease name

# pubmeds

Source

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene