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![]() | Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples |
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![]() | The effects of the RNA editing to the stability of the RNA structures |
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Editing gene: KRT86 (CAeditome ID:3892) |
Gene summary for KRT86 |
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Gene information | Gene symbol | KRT86 | Gene ID | 3892 |
Gene name | keratin 86 | |
Synonyms | HB6|Hb1|K86|KRTHB1|KRTHB6|MNX | |
Cytomap | 12q13.13 | |
Type of gene | protein-coding | |
Description | keratin, type II cuticular Hb6hair keratin K2.11hard keratin, type II, 6keratin 86, type IIkeratin protein HB6keratin, hair, basic, 6 (monilethrix)type II hair keratin Hb6type-II keratin Kb26 | |
Modification date | 20210518 | |
UniProtAcc | O43790 | |
Context |
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Gene | GO ID | GO term | PubMed ID |
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RNA A-to-I events for KRT86 |
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CAediting_892073(52264049, +), CAediting_892074(52264064, +), CAediting_892075(52264102, +), CAediting_892076(52264181, +), CAediting_892077(52264186, +), CAediting_892078(52264187, +), CAediting_892079(52266138, +), CAediting_892080(52266164, +), CAediting_892081(52266165, +), CAediting_892082(52266175, +), CAediting_892083(52266204, +), CAediting_892084(52266210, +), CAediting_892085(52270124, +), CAediting_892086(52270127, +), CAediting_892087(52270283, +), CAediting_892088(52270289, +), CAediting_892089(52270419, +), CAediting_892090(52270448, +), CAediting_892091(52281880, +), CAediting_892092(52281884, +), CAediting_892093(52283247, +), CAediting_892094(52283350, +), CAediting_892095(52305298, +), CAediting_892096(52305340, +), CAediting_892097(52305344, +), |
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RNA editing positional annotations for KRT86 using Annovar |
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CAeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
CAediting_892095 | chr12_52305298_+ | nonsynonymous SNV | ENST00000293525.5 | c.A794G | p.N265S | D | P | D |
CAediting_892095 | chr12_52305298_+ | nonsynonymous SNV | ENST00000423955.5 | c.A794G | p.N265S | D | P | D |
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CAeditome ID | Position | Variant type |
CAediting_892073 | chr12_52264049_+ | intronic |
CAediting_892074 | chr12_52264064_+ | intronic |
CAediting_892075 | chr12_52264102_+ | intronic |
CAediting_892076 | chr12_52264181_+ | intronic |
CAediting_892077 | chr12_52264186_+ | intronic |
CAediting_892078 | chr12_52264187_+ | intronic |
CAediting_892079 | chr12_52266138_+ | intronic |
CAediting_892080 | chr12_52266164_+ | intronic |
CAediting_892081 | chr12_52266165_+ | intronic |
CAediting_892082 | chr12_52266175_+ | intronic |
CAediting_892083 | chr12_52266204_+ | intronic |
CAediting_892084 | chr12_52266210_+ | intronic |
CAediting_892085 | chr12_52270124_+ | intronic |
CAediting_892086 | chr12_52270127_+ | intronic |
CAediting_892087 | chr12_52270283_+ | intronic |
CAediting_892088 | chr12_52270289_+ | intronic |
CAediting_892089 | chr12_52270419_+ | intronic |
CAediting_892090 | chr12_52270448_+ | intronic |
CAediting_892091 | chr12_52281880_+ | intronic |
CAediting_892092 | chr12_52281884_+ | intronic |
CAediting_892093 | chr12_52283247_+ | intronic |
CAediting_892094 | chr12_52283350_+ | intronic |
CAediting_892095 | chr12_52305298_+ | exonic |
CAediting_892096 | chr12_52305340_+ | exonic |
CAediting_892097 | chr12_52305344_+ | exonic |
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CAeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
CAediting_892079 | chr12_52266138_+ | SINE | Alu | AluSx |
CAediting_892080 | chr12_52266164_+ | SINE | Alu | AluSx |
CAediting_892081 | chr12_52266165_+ | SINE | Alu | AluSx |
CAediting_892082 | chr12_52266175_+ | SINE | Alu | AluSx |
CAediting_892083 | chr12_52266204_+ | SINE | Alu | AluSx |
CAediting_892084 | chr12_52266210_+ | SINE | Alu | AluSx |
CAediting_892085 | chr12_52270124_+ | SINE | Alu | AluJo |
CAediting_892086 | chr12_52270127_+ | SINE | Alu | AluJo |
CAediting_892087 | chr12_52270283_+ | SINE | Alu | AluSz |
CAediting_892088 | chr12_52270289_+ | SINE | Alu | AluSz |
CAediting_892089 | chr12_52270419_+ | SINE | Alu | AluSz |
CAediting_892090 | chr12_52270448_+ | SINE | Alu | AluSz |
CAediting_892091 | chr12_52281880_+ | SINE | Alu | AluJr |
CAediting_892092 | chr12_52281884_+ | SINE | Alu | AluJr |
CAediting_892093 | chr12_52283247_+ | SINE | Alu | AluSg4 |
CAediting_892094 | chr12_52283350_+ | SINE | Alu | AluSg4 |
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RNA A-to-I editing events in the alternative splicing sites for KRT86 |
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AStype | CAeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
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Differntial gene expression between RNA A-to-I edited versus non-edited samples for KRT86 |
![]() * The grey color means N/A. |
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Protein coding region RNA A-to-I editings for KRT86 |
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The effects of the RNA editing to the miRNA binding sites for KRT86 |
**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page. |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
CAediting_748296 | chr10_51299626_+ | ENSG00000170442.10 | ENST00000423955 | hsa-miR-605-3p | 52309066 | 52309073 | 8mer-1a | 52309051 | 52309073 | 143 | -16.72 |
CAediting_748296 | chr10_51299626_+ | ENSG00000170442.10 | ENST00000293525 | hsa-miR-605-3p | 52309066 | 52309073 | 8mer-1a | 52309051 | 52309073 | 143 | -16.72 |
CAediting_1229414 | chr17_67471546_+ | ENSG00000170442.10 | ENST00000423955 | hsa-miR-548aa | 52308875 | 52308881 | 7mer-m8 | 52308860 | 52308882 | 146 | -11.71 |
CAediting_86358 | chr1_109598906_+ | ENSG00000170442.10 | ENST00000423955 | hsa-miR-197-5p | 52308623 | 52308630 | 8mer-1a | 52308607 | 52308630 | 168 | -36.31 |
CAediting_396018 | chr5_1062918_- | ENSG00000170442.10 | ENST00000423955 | hsa-miR-4635 | 52309069 | 52309076 | 8mer-1a | 52309057 | 52309076 | 160 | -27.12 |
CAediting_1229414 | chr17_67471546_+ | ENSG00000170442.10 | ENST00000293525 | hsa-miR-548aa | 52308875 | 52308881 | 7mer-m8 | 52308860 | 52308882 | 146 | -11.71 |
CAediting_86358 | chr1_109598906_+ | ENSG00000170442.10 | ENST00000293525 | hsa-miR-197-5p | 52308623 | 52308630 | 8mer-1a | 52308607 | 52308630 | 168 | -36.31 |
CAediting_396018 | chr5_1062918_- | ENSG00000170442.10 | ENST00000293525 | hsa-miR-4635 | 52309069 | 52309076 | 8mer-1a | 52309057 | 52309076 | 160 | -27.12 |
CAediting_1524209 | chrX_134546392_- | ENSG00000170442.10 | ENST00000423955 | hsa-miR-503-5p | 52308690 | 52308696 | 7mer-m8 | 52308675 | 52308697 | 150 | -22.91 |
CAediting_1524209 | chrX_134546392_- | ENSG00000170442.10 | ENST00000293525 | hsa-miR-503-5p | 52308690 | 52308696 | 7mer-m8 | 52308675 | 52308697 | 150 | -22.91 |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
CAediting_748296 | chr10_51299626_+ | ENSG00000170442.10 | ENST00000423955 | hsa-miR-605-3p | 52308847 | 52308853 | 7mer-m8 | 52308833 | 52308854 | 140 | -14.21 |
CAediting_748296 | chr10_51299626_+ | ENSG00000170442.10 | ENST00000423955 | hsa-miR-605-3p | 52309102 | 52309108 | 7mer-m8 | 52309088 | 52309109 | 153 | -20.4 |
CAediting_748296 | chr10_51299626_+ | ENSG00000170442.10 | ENST00000293525 | hsa-miR-605-3p | 52308847 | 52308853 | 7mer-m8 | 52308833 | 52308854 | 140 | -14.21 |
CAediting_748296 | chr10_51299626_+ | ENSG00000170442.10 | ENST00000293525 | hsa-miR-605-3p | 52309102 | 52309108 | 7mer-m8 | 52309088 | 52309109 | 153 | -20.4 |
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The effects of the RNA editing to the stability of the RNA structures for KRT86 |
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ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
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CAeditom_ID | ENST | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
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Relation with ADAR for KRT86 |
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Cancer | CAeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
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Relation with cancer stages for KRT86 |
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Cancer | Stage_type | CAeditomID | position | P-val | Coeff. |
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Relation with survival for KRT86 |
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Cancer | CAeditomID | position | KMpvalue | Coxpvalue | CoxHR |
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RelatedDrugs for KRT86 |
![]() (DrugBank Version 5.1.8 2021-01-03) |
Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for KRT86 |
![]() (DisGeNet 7.0) |
Gene | Disease ID | Disease name | # pubmeds | Source |
KRT86 | C0546966 | Monilethrix | 7 | CTD_human;ORPHANET;UNIPROT |