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Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with cancer stages

Soverview

Relation with survival state

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene

Editing gene: C2orf81 (CAeditome ID:388963)

Gene summary for C2orf81

check button Gene summary
Gene informationGene symbol

C2orf81

Gene ID

388963

Gene namechromosome 2 open reading frame 81
SynonymshCG40743
Cytomap

2p13.1

Type of geneprotein-coding
Descriptionuncharacterized protein C2orf81
Modification date20210518
UniProtAcc

.

Context

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID

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RNA A-to-I events for C2orf81

check buttonRNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.
all structure

check button RNA editing frequencies across 33 cancers of gene: ENSG00000159239.10

check button RNA A-to-I editing events in Cancer.
CAediting_195034(74416484, -), CAediting_195035(74416521, -), CAediting_195036(74418924, -), CAediting_195037(74418937, -), CAediting_195038(74418938, -), CAediting_195039(74418962, -), CAediting_195040(74418963, -), CAediting_195041(74418964, -), CAediting_195042(74418998, -), CAediting_195043(74419001, -), CAediting_195044(74419018, -), CAediting_195045(74419021, -), CAediting_195046(74419049, -), CAediting_195047(74419063, -), CAediting_195048(74419069, -), CAediting_195049(74419099, -), CAediting_195050(74419124, -), CAediting_195051(74419129, -), CAediting_195052(74419140, -), CAediting_195053(74419173, -), CAediting_195054(74419175, -), CAediting_195055(74419177, -), CAediting_195056(74419179, -), CAediting_195057(74419289, -), CAediting_195058(74419290, -), CAediting_195059(74419293, -), CAediting_195060(74419807, -), CAediting_195061(74419829, -), CAediting_195062(74419861, -), CAediting_195063(74419909, -), CAediting_195064(74419910, -), CAediting_195065(74419920, -), CAediting_195066(74419932, -), CAediting_195067(74419936, -), CAediting_195068(74419940, -), CAediting_195069(74419976, -), CAediting_195070(74419978, -), CAediting_195071(74419991, -), CAediting_195072(74419993, -), CAediting_195073(74419994, -), CAediting_195074(74420014, -), CAediting_195075(74420779, -), CAediting_195076(74420794, -), CAediting_195077(74420816, -), CAediting_195078(74420818, -), CAediting_195079(74420838, -), CAediting_195080(74420848, -), CAediting_195081(74420853, -), CAediting_195082(74420878, -), CAediting_195083(74420886, -), CAediting_195084(74420892, -), CAediting_195085(74420898, -), CAediting_195086(74420902, -), CAediting_195087(74420909, -), CAediting_195088(74420918, -), CAediting_195089(74420919, -), CAediting_195090(74420946, -), CAediting_195091(74420949, -), CAediting_195092(74420950, -), CAediting_195093(74420952, -), CAediting_195094(74420953, -), CAediting_195095(74420956, -), CAediting_195096(74420958, -), CAediting_195097(74420960, -), CAediting_195098(74420961, -), CAediting_195099(74420977, -), CAediting_195100(74420983, -), CAediting_195101(74420985, -), CAediting_195102(74420986, -), CAediting_195103(74420995, -), CAediting_195104(74420998, -), CAediting_195105(74421000, -), CAediting_195106(74421001, -), CAediting_195107(74421009, -), CAediting_195108(74421014, -), CAediting_195109(74421040, -), CAediting_195110(74421046, -), CAediting_195111(74421049, -), CAediting_195112(74421054, -), CAediting_195113(74421055, -), CAediting_195114(74421071, -),

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RNA editing positional annotations for C2orf81 using Annovar

check button Protein coding RNA editing(s).
CAeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred

check button Gene structure information of RNA editing(s).
CAeditome IDPositionVariant type
CAediting_195034chr2_74416484_-UTR5
CAediting_195035chr2_74416521_-UTR5
CAediting_195036chr2_74418924_-intronic
CAediting_195037chr2_74418937_-intronic
CAediting_195038chr2_74418938_-intronic
CAediting_195039chr2_74418962_-intronic
CAediting_195040chr2_74418963_-intronic
CAediting_195041chr2_74418964_-intronic
CAediting_195042chr2_74418998_-intronic
CAediting_195043chr2_74419001_-intronic
CAediting_195044chr2_74419018_-intronic
CAediting_195045chr2_74419021_-intronic
CAediting_195046chr2_74419049_-intronic
CAediting_195047chr2_74419063_-intronic
CAediting_195048chr2_74419069_-intronic
CAediting_195049chr2_74419099_-intronic
CAediting_195050chr2_74419124_-intronic
CAediting_195051chr2_74419129_-intronic
CAediting_195052chr2_74419140_-intronic
CAediting_195053chr2_74419173_-intronic
CAediting_195054chr2_74419175_-intronic
CAediting_195055chr2_74419177_-intronic
CAediting_195056chr2_74419179_-intronic
CAediting_195057chr2_74419289_-intronic
CAediting_195058chr2_74419290_-intronic
CAediting_195059chr2_74419293_-intronic
CAediting_195060chr2_74419807_-intronic
CAediting_195061chr2_74419829_-intronic
CAediting_195062chr2_74419861_-intronic
CAediting_195063chr2_74419909_-intronic
CAediting_195064chr2_74419910_-intronic
CAediting_195065chr2_74419920_-intronic
CAediting_195066chr2_74419932_-intronic
CAediting_195067chr2_74419936_-intronic
CAediting_195068chr2_74419940_-intronic
CAediting_195069chr2_74419976_-intronic
CAediting_195070chr2_74419978_-intronic
CAediting_195071chr2_74419991_-intronic
CAediting_195072chr2_74419993_-intronic
CAediting_195073chr2_74419994_-intronic
CAediting_195074chr2_74420014_-intronic
CAediting_195075chr2_74420779_-intronic
CAediting_195076chr2_74420794_-intronic
CAediting_195077chr2_74420816_-intronic
CAediting_195078chr2_74420818_-intronic
CAediting_195079chr2_74420838_-intronic
CAediting_195080chr2_74420848_-intronic
CAediting_195081chr2_74420853_-intronic
CAediting_195082chr2_74420878_-intronic
CAediting_195083chr2_74420886_-intronic
CAediting_195084chr2_74420892_-intronic
CAediting_195085chr2_74420898_-intronic
CAediting_195086chr2_74420902_-intronic
CAediting_195087chr2_74420909_-intronic
CAediting_195088chr2_74420918_-intronic
CAediting_195089chr2_74420919_-intronic
CAediting_195090chr2_74420946_-intronic
CAediting_195091chr2_74420949_-intronic
CAediting_195092chr2_74420950_-intronic
CAediting_195093chr2_74420952_-intronic
CAediting_195094chr2_74420953_-intronic
CAediting_195095chr2_74420956_-intronic
CAediting_195096chr2_74420958_-intronic
CAediting_195097chr2_74420960_-intronic
CAediting_195098chr2_74420961_-intronic
CAediting_195099chr2_74420977_-intronic
CAediting_195100chr2_74420983_-intronic
CAediting_195101chr2_74420985_-intronic
CAediting_195102chr2_74420986_-intronic
CAediting_195103chr2_74420995_-intronic
CAediting_195104chr2_74420998_-intronic
CAediting_195105chr2_74421000_-intronic
CAediting_195106chr2_74421001_-intronic
CAediting_195107chr2_74421009_-intronic
CAediting_195108chr2_74421014_-intronic
CAediting_195109chr2_74421040_-intronic
CAediting_195110chr2_74421046_-intronic
CAediting_195111chr2_74421049_-intronic
CAediting_195112chr2_74421054_-intronic
CAediting_195113chr2_74421055_-intronic
CAediting_195114chr2_74421071_-intronic

check button Repat-regional RNA editing(s).
CAeditome IDPositionRepeat familyRepeat sub familyRepeat name
CAediting_195034chr2_74416484_-SINEAluAluSc
CAediting_195035chr2_74416521_-SINEAluAluSc
CAediting_195036chr2_74418924_-SINEAluAluSx1
CAediting_195037chr2_74418937_-SINEAluAluSx1
CAediting_195038chr2_74418938_-SINEAluAluSx1
CAediting_195039chr2_74418962_-SINEAluAluSx1
CAediting_195040chr2_74418963_-SINEAluAluSx1
CAediting_195041chr2_74418964_-SINEAluAluSx1
CAediting_195042chr2_74418998_-SINEAluAluSx1
CAediting_195043chr2_74419001_-SINEAluAluSx1
CAediting_195044chr2_74419018_-SINEAluAluSx1
CAediting_195045chr2_74419021_-SINEAluAluSx1
CAediting_195046chr2_74419049_-SINEAluAluSx1
CAediting_195047chr2_74419063_-SINEAluAluSx1
CAediting_195048chr2_74419069_-SINEAluAluSx1
CAediting_195049chr2_74419099_-SINEAluAluSx1
CAediting_195050chr2_74419124_-SINEAluAluSx1
CAediting_195051chr2_74419129_-SINEAluAluSx1
CAediting_195052chr2_74419140_-SINEAluAluSx1
CAediting_195053chr2_74419173_-SINEAluAluSx1
CAediting_195054chr2_74419175_-SINEAluAluSx1
CAediting_195055chr2_74419177_-SINEAluAluSx1
CAediting_195056chr2_74419179_-SINEAluAluSx1
CAediting_195057chr2_74419289_-SINEAluFRAM
CAediting_195058chr2_74419290_-SINEAluFRAM
CAediting_195059chr2_74419293_-SINEAluFRAM
CAediting_195060chr2_74419807_-SINEAluAluSx1
CAediting_195061chr2_74419829_-SINEAluAluSx1
CAediting_195062chr2_74419861_-SINEAluAluSx1
CAediting_195063chr2_74419909_-SINEAluAluSx1
CAediting_195064chr2_74419910_-SINEAluAluSx1
CAediting_195065chr2_74419920_-SINEAluAluSx1
CAediting_195066chr2_74419932_-SINEAluAluSx1
CAediting_195067chr2_74419936_-SINEAluAluSx1
CAediting_195068chr2_74419940_-SINEAluAluSx1
CAediting_195069chr2_74419976_-SINEAluAluSx1
CAediting_195070chr2_74419978_-SINEAluAluSx1
CAediting_195071chr2_74419991_-SINEAluAluSx1
CAediting_195072chr2_74419993_-SINEAluAluSx1
CAediting_195073chr2_74419994_-SINEAluAluSx1
CAediting_195074chr2_74420014_-SINEAluAluSx1
CAediting_195075chr2_74420779_-SINEAluAluSx
CAediting_195076chr2_74420794_-SINEAluAluSx
CAediting_195077chr2_74420816_-SINEAluAluSx
CAediting_195078chr2_74420818_-SINEAluAluSx
CAediting_195079chr2_74420838_-SINEAluAluSx
CAediting_195080chr2_74420848_-SINEAluAluSx
CAediting_195081chr2_74420853_-SINEAluAluSx
CAediting_195082chr2_74420878_-SINEAluAluSx
CAediting_195083chr2_74420886_-SINEAluAluSx
CAediting_195084chr2_74420892_-SINEAluAluSx
CAediting_195085chr2_74420898_-SINEAluAluSx
CAediting_195086chr2_74420902_-SINEAluAluSx
CAediting_195087chr2_74420909_-SINEAluAluSx
CAediting_195088chr2_74420918_-SINEAluAluSx
CAediting_195089chr2_74420919_-SINEAluAluSx
CAediting_195090chr2_74420946_-SINEAluAluSx
CAediting_195091chr2_74420949_-SINEAluAluSx
CAediting_195092chr2_74420950_-SINEAluAluSx
CAediting_195093chr2_74420952_-SINEAluAluSx
CAediting_195094chr2_74420953_-SINEAluAluSx
CAediting_195095chr2_74420956_-SINEAluAluSx
CAediting_195096chr2_74420958_-SINEAluAluSx
CAediting_195097chr2_74420960_-SINEAluAluSx
CAediting_195098chr2_74420961_-SINEAluAluSx
CAediting_195099chr2_74420977_-SINEAluAluSx
CAediting_195100chr2_74420983_-SINEAluAluSx
CAediting_195101chr2_74420985_-SINEAluAluSx
CAediting_195102chr2_74420986_-SINEAluAluSx
CAediting_195103chr2_74420995_-SINEAluAluSx
CAediting_195104chr2_74420998_-SINEAluAluSx
CAediting_195105chr2_74421000_-SINEAluAluSx
CAediting_195106chr2_74421001_-SINEAluAluSx
CAediting_195107chr2_74421009_-SINEAluAluSx
CAediting_195108chr2_74421014_-SINEAluAluSx
CAediting_195109chr2_74421040_-SINEAluAluSx
CAediting_195110chr2_74421046_-SINEAluAluSx
CAediting_195111chr2_74421049_-SINEAluAluSx
CAediting_195112chr2_74421054_-SINEAluAluSx
CAediting_195113chr2_74421055_-SINEAluAluSx
CAediting_195114chr2_74421071_-SINEAluAluSx

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RNA A-to-I editing events in the alternative splicing sites for C2orf81

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeCAeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength

check button Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000159239.10.C2orf81.

check button Correlation between RNA A-to-I editing and PSI for ENSG00000159239.10.C2orf81.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for C2orf81

check button Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.
boxplot

check button Correlation between RNA A-to-I editing and gene expression.
boxplot

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for C2orf81

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.


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The effects of the RNA editing to the miRNA binding sites for C2orf81

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for C2orf81

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.
ENST00000517883.1protein_codingSoverviewSoverview

check button RNA A-to-I editing in RNA structures for Minimum free energy (MFE).
CAeditom_IDENSTEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI
CAediting_195034ENST00000517883.1chr2_74416484_--1038.10-1036.40-1037.40
CAediting_195035ENST00000517883.1chr2_74416521_--1035.70-1036.40-1037.40

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Relation with ADAR for C2orf81

check button Correlation between ADAR gene expression and RNA editing frequency
CancerCAeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)

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Relation with cancer stages for C2orf81

check button Correlation between Cancer stages and RNA editing frequency
CancerStage_typeCAeditomIDpositionP-valCoeff.

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Relation with survival for C2orf81

check button Correlation between RNA editing and survival
CancerCAeditomIDpositionKMpvalueCoxpvalueCoxHR

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RelatedDrugs for C2orf81

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for C2orf81

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease name# pubmedsSource