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Editing gene: LINC00671 (CAeditome ID:388387)

Gene summary for LINC00671

Gene summary

Gene information	Gene symbol	LINC00671
	Gene ID	388387
	Gene name	long intergenic non-protein coding RNA 671
	Synonyms	-
	Cytomap	17q21.31
	Type of gene	ncRNA
	Description	-
	Modification date	20210531
	UniProtAcc	.
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene

GO ID

GO term

PubMed ID

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RNA A-to-I events for LINC00671

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000213373.6

RNA A-to-I editing events in Cancer.

CAediting_1198427(42874760, -), CAediting_1198428(42874773, -), CAediting_1198429(42874785, -), CAediting_1198430(42874786, -), CAediting_1198431(42874787, -), CAediting_1198432(42874840, -), CAediting_1198433(42874862, -), CAediting_1198434(42874909, -), CAediting_1198435(42874910, -), CAediting_1198436(42874911, -), CAediting_1198437(42874921, -), CAediting_1198438(42874925, -), CAediting_1198439(42874970, -), CAediting_1198440(42874986, -), CAediting_1198441(42875019, -), CAediting_1198442(42875116, -), CAediting_1198443(42875134, -), CAediting_1198444(42875138, -), CAediting_1198445(42875146, -), CAediting_1198446(42875147, -), CAediting_1198447(42875185, -), CAediting_1198448(42875189, -), CAediting_1198449(42875202, -), CAediting_1198450(42875211, -), CAediting_1198451(42875212, -), CAediting_1198452(42875218, -), CAediting_1198453(42875234, -), CAediting_1198454(42875238, -), CAediting_1198455(42875241, -), CAediting_1198456(42875256, -), CAediting_1198457(42875275, -), CAediting_1198458(42875280, -), CAediting_1198459(42875281, -), CAediting_1198460(42875282, -), CAediting_1198461(42875288, -), CAediting_1198462(42875290, -), CAediting_1198463(42875291, -), CAediting_1198464(42875305, -), CAediting_1198465(42875314, -), CAediting_1198466(42875319, -), CAediting_1198467(42875351, -), CAediting_1198468(42875354, -), CAediting_1198469(42875359, -), CAediting_1198470(42875360, -), CAediting_1198471(42875378, -), CAediting_1198472(42875382, -), CAediting_1198473(42876025, -), CAediting_1198474(42876037, -), CAediting_1198475(42876038, -), CAediting_1198476(42876047, -), CAediting_1198477(42876065, -), CAediting_1198478(42876071, -), CAediting_1198479(42876097, -), CAediting_1198480(42876102, -), CAediting_1198481(42876116, -), CAediting_1198482(42876119, -), CAediting_1198483(42876132, -), CAediting_1198484(42876137, -), CAediting_1198485(42876159, -), CAediting_1198486(42876169, -), CAediting_1198487(42876172, -), CAediting_1198488(42876181, -), CAediting_1198489(42876194, -), CAediting_1198490(42876198, -), CAediting_1198491(42876199, -), CAediting_1198492(42876234, -), CAediting_1198493(42876235, -), CAediting_1198494(42876495, -), CAediting_1198495(42876500, -), CAediting_1198496(42876501, -), CAediting_1198497(42876509, -), CAediting_1198498(42876542, -), CAediting_1198499(42876548, -), CAediting_1198500(42876564, -), CAediting_1198501(42876568, -), CAediting_1198502(42876577, -), CAediting_1198503(42876581, -), CAediting_1198504(42876582, -), CAediting_1198505(42876597, -), CAediting_1198506(42876598, -), CAediting_1198507(42876605, -), CAediting_1198508(42876607, -), CAediting_1198509(42876608, -), CAediting_1198510(42876631, -), CAediting_1198511(42876655, -), CAediting_1198512(42876668, -), CAediting_1198513(42876671, -), CAediting_1198514(42876676, -), CAediting_1198515(42876677, -), CAediting_1198516(42876695, -), CAediting_1198517(42876726, -), CAediting_1198518(42876972, -), CAediting_1198519(42876992, -), CAediting_1198520(42877038, -), CAediting_1198521(42877074, -), CAediting_1198522(42877078, -), CAediting_1198523(42877080, -), CAediting_1198524(42877104, -), CAediting_1198525(42877105, -), CAediting_1198526(42877114, -), CAediting_1198527(42877134, -), CAediting_1198528(42877137, -), CAediting_1198529(42877160, -), CAediting_1198530(42877177, -), CAediting_1198531(42877182, -), CAediting_1198532(42877183, -), CAediting_1198533(42877189, -), CAediting_1198534(42877191, -), CAediting_1198535(42877199, -), CAediting_1198536(42877205, -), CAediting_1198537(42877747, -), CAediting_1198538(42877759, -), CAediting_1198539(42877760, -), CAediting_1198540(42877769, -), CAediting_1198541(42878086, -), CAediting_1198542(42878111, -), CAediting_1198543(42878131, -), CAediting_1198544(42878181, -), CAediting_1198545(42880525, -), CAediting_1198546(42880657, -), CAediting_1198547(42880661, -), CAediting_1198548(42880669, -), CAediting_1198549(42880686, -), CAediting_1198550(42880700, -), CAediting_1198551(42880743, -), CAediting_1198552(42880756, -), CAediting_1198553(42880764, -), CAediting_1198554(42881785, -), CAediting_1198555(42881789, -), CAediting_1198556(42881818, -), CAediting_1198557(42881819, -), CAediting_1198558(42881820, -), CAediting_1198559(42881821, -), CAediting_1198560(42881826, -), CAediting_1198561(42881851, -), CAediting_1198562(42881856, -), CAediting_1198563(42881874, -), CAediting_1198564(42881905, -), CAediting_1198565(42882337, -), CAediting_1198566(42882349, -), CAediting_1198567(42882350, -), CAediting_1198568(42882351, -), CAediting_1198569(42882359, -), CAediting_1198570(42882376, -), CAediting_1198571(42882377, -), CAediting_1198572(42882402, -), CAediting_1198573(42882414, -), CAediting_1198574(42882422, -), CAediting_1198575(42882447, -), CAediting_1198576(42882470, -), CAediting_1198577(42882479, -), CAediting_1198578(42882483, -), CAediting_1198579(42882486, -), CAediting_1198580(42882487, -), CAediting_1198581(42882501, -), CAediting_1198582(42882537, -), CAediting_1198583(42882547, -), CAediting_1198584(42882550, -), CAediting_1198585(42882552, -), CAediting_1198586(42882553, -), CAediting_1198587(42882563, -), CAediting_1198588(42882850, -), CAediting_1198589(42882862, -), CAediting_1198590(42882911, -), CAediting_1198591(42882915, -), CAediting_1198592(42882927, -), CAediting_1198593(42882941, -), CAediting_1198594(42882944, -), CAediting_1198595(42883100, -), CAediting_1198596(42883484, -), CAediting_1198597(42883531, -), CAediting_1198598(42883540, -), CAediting_1198599(42883543, -), CAediting_1198600(42883552, -), CAediting_1198601(42883553, -), CAediting_1198602(42883563, -), CAediting_1198603(42883587, -), CAediting_1198604(42883648, -), CAediting_1198605(42883656, -), CAediting_1198606(42883694, -), CAediting_1198607(42883705, -), CAediting_1198608(42883706, -), CAediting_1198609(42883719, -), CAediting_1198610(42883727, -), CAediting_1198611(42883728, -), CAediting_1198612(42883736, -), CAediting_1198613(42884342, -), CAediting_1198614(42884620, -), CAediting_1198615(42884637, -), CAediting_1198616(42884650, -), CAediting_1198617(42884663, -), CAediting_1198618(42884682, -), CAediting_1198619(42884753, -), CAediting_1198620(42884781, -), CAediting_1198621(42884789, -), CAediting_1198622(42884803, -), CAediting_1198623(42884808, -), CAediting_1198624(42884851, -), CAediting_1198625(42885555, -), CAediting_1198626(42885556, -), CAediting_1198627(42885559, -), CAediting_1198628(42885589, -), CAediting_1198629(42885598, -), CAediting_1198630(42885724, -), CAediting_1198631(42885729, -), CAediting_1198632(42885738, -), CAediting_1198633(42885878, -), CAediting_1198634(42885896, -), CAediting_1198635(42885905, -), CAediting_1198636(42885919, -), CAediting_1198637(42886065, -), CAediting_1198638(42886078, -), CAediting_1198639(42886079, -), CAediting_1198640(42886159, -), CAediting_1198641(42886166, -), CAediting_1198642(42886211, -), CAediting_1198643(42886212, -), CAediting_1198644(42887249, -), CAediting_1198645(42887407, -), CAediting_1198646(42887932, -), CAediting_1198647(42888233, -), CAediting_1198648(42888235, -), CAediting_1198649(42888247, -), CAediting_1198650(42888320, -), CAediting_1198651(42888323, -), CAediting_1198652(42888326, -), CAediting_1198653(42888372, -), CAediting_1198654(42888380, -), CAediting_1198655(42888444, -), CAediting_1198656(42888461, -), CAediting_1198657(42888992, -), CAediting_1198658(42888993, -), CAediting_1198659(42889007, -), CAediting_1198660(42890573, -), CAediting_1198661(42890579, -), CAediting_1198662(42890820, -), CAediting_1198663(42890852, -), CAediting_1198664(42890860, -), CAediting_1198665(42890866, -), CAediting_1198666(42890891, -), CAediting_1198667(42890928, -), CAediting_1198668(42891079, -), CAediting_1198669(42891112, -), CAediting_1198670(42891123, -), CAediting_1198671(42891158, -), CAediting_1198672(42891164, -), CAediting_1198673(42892392, -), CAediting_1198674(42892459, -), CAediting_1198675(42892465, -), CAediting_1198676(42892718, -), CAediting_1198677(42892769, -), CAediting_1198678(42892773, -), CAediting_1198679(42893990, -), CAediting_1198680(42894060, -), CAediting_1198681(42894834, -), CAediting_1198682(42894909, -), CAediting_1198683(42894984, -), CAediting_1198684(42894993, -), CAediting_1198685(42894996, -), CAediting_1198686(42895023, -), CAediting_1198687(42895066, -), CAediting_1198688(42895077, -), CAediting_1198689(42895769, -), CAediting_1198690(42895781, -), CAediting_1198691(42895804, -), CAediting_1198692(42895805, -), CAediting_1198693(42895914, -), CAediting_1198694(42895924, -), CAediting_1198695(42895942, -), CAediting_1198696(42895970, -), CAediting_1198697(42896099, -), CAediting_1198698(42896104, -), CAediting_1198699(42896105, -), CAediting_1198700(42896160, -), CAediting_1198701(42896175, -), CAediting_1198702(42896204, -), CAediting_1198703(42896539, -), CAediting_1198704(42896547, -), CAediting_1198705(42896608, -), CAediting_1198706(42896634, -), CAediting_1198707(42897297, -), CAediting_1198708(42897298, -), CAediting_1198709(42897299, -), CAediting_1198710(42897315, -), CAediting_1198711(42897368, -), CAediting_1198712(42897701, -), CAediting_1198713(42897702, -), CAediting_1198714(42897744, -), CAediting_1198715(42897798, -), CAediting_1198716(42897803, -), CAediting_1198717(42897884, -), CAediting_1198718(42897889, -), CAediting_1198719(42897894, -), CAediting_1198720(42897932, -),

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RNA editing positional annotations for LINC00671 using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_1198427	chr17_42874760_-	ncRNA_exonic
CAediting_1198428	chr17_42874773_-	ncRNA_exonic
CAediting_1198429	chr17_42874785_-	ncRNA_exonic
CAediting_1198430	chr17_42874786_-	ncRNA_exonic
CAediting_1198431	chr17_42874787_-	ncRNA_exonic
CAediting_1198432	chr17_42874840_-	ncRNA_exonic
CAediting_1198433	chr17_42874862_-	ncRNA_exonic
CAediting_1198434	chr17_42874909_-	ncRNA_intronic
CAediting_1198435	chr17_42874910_-	ncRNA_intronic
CAediting_1198436	chr17_42874911_-	ncRNA_intronic
CAediting_1198437	chr17_42874921_-	ncRNA_intronic
CAediting_1198438	chr17_42874925_-	ncRNA_intronic
CAediting_1198439	chr17_42874970_-	ncRNA_intronic
CAediting_1198440	chr17_42874986_-	ncRNA_intronic
CAediting_1198441	chr17_42875019_-	ncRNA_intronic
CAediting_1198442	chr17_42875116_-	ncRNA_intronic
CAediting_1198443	chr17_42875134_-	ncRNA_intronic
CAediting_1198444	chr17_42875138_-	ncRNA_intronic
CAediting_1198445	chr17_42875146_-	ncRNA_intronic
CAediting_1198446	chr17_42875147_-	ncRNA_intronic
CAediting_1198447	chr17_42875185_-	ncRNA_intronic
CAediting_1198448	chr17_42875189_-	ncRNA_intronic
CAediting_1198449	chr17_42875202_-	ncRNA_intronic
CAediting_1198450	chr17_42875211_-	ncRNA_intronic
CAediting_1198451	chr17_42875212_-	ncRNA_intronic
CAediting_1198452	chr17_42875218_-	ncRNA_intronic
CAediting_1198453	chr17_42875234_-	ncRNA_intronic
CAediting_1198454	chr17_42875238_-	ncRNA_intronic
CAediting_1198455	chr17_42875241_-	ncRNA_intronic
CAediting_1198456	chr17_42875256_-	ncRNA_intronic
CAediting_1198457	chr17_42875275_-	ncRNA_intronic
CAediting_1198458	chr17_42875280_-	ncRNA_intronic
CAediting_1198459	chr17_42875281_-	ncRNA_intronic
CAediting_1198460	chr17_42875282_-	ncRNA_intronic
CAediting_1198461	chr17_42875288_-	ncRNA_intronic
CAediting_1198462	chr17_42875290_-	ncRNA_intronic
CAediting_1198463	chr17_42875291_-	ncRNA_intronic
CAediting_1198464	chr17_42875305_-	ncRNA_intronic
CAediting_1198465	chr17_42875314_-	ncRNA_intronic
CAediting_1198466	chr17_42875319_-	ncRNA_intronic
CAediting_1198467	chr17_42875351_-	ncRNA_intronic
CAediting_1198468	chr17_42875354_-	ncRNA_intronic
CAediting_1198469	chr17_42875359_-	ncRNA_intronic
CAediting_1198470	chr17_42875360_-	ncRNA_intronic
CAediting_1198471	chr17_42875378_-	ncRNA_intronic
CAediting_1198472	chr17_42875382_-	ncRNA_intronic
CAediting_1198473	chr17_42876025_-	ncRNA_intronic
CAediting_1198474	chr17_42876037_-	ncRNA_intronic
CAediting_1198475	chr17_42876038_-	ncRNA_intronic
CAediting_1198476	chr17_42876047_-	ncRNA_intronic
CAediting_1198477	chr17_42876065_-	ncRNA_intronic
CAediting_1198478	chr17_42876071_-	ncRNA_intronic
CAediting_1198479	chr17_42876097_-	ncRNA_intronic
CAediting_1198480	chr17_42876102_-	ncRNA_intronic
CAediting_1198481	chr17_42876116_-	ncRNA_intronic
CAediting_1198482	chr17_42876119_-	ncRNA_intronic
CAediting_1198483	chr17_42876132_-	ncRNA_intronic
CAediting_1198484	chr17_42876137_-	ncRNA_intronic
CAediting_1198485	chr17_42876159_-	ncRNA_intronic
CAediting_1198486	chr17_42876169_-	ncRNA_intronic
CAediting_1198487	chr17_42876172_-	ncRNA_intronic
CAediting_1198488	chr17_42876181_-	ncRNA_intronic
CAediting_1198489	chr17_42876194_-	ncRNA_intronic
CAediting_1198490	chr17_42876198_-	ncRNA_intronic
CAediting_1198491	chr17_42876199_-	ncRNA_intronic
CAediting_1198492	chr17_42876234_-	ncRNA_intronic
CAediting_1198493	chr17_42876235_-	ncRNA_intronic
CAediting_1198494	chr17_42876495_-	ncRNA_intronic
CAediting_1198495	chr17_42876500_-	ncRNA_intronic
CAediting_1198496	chr17_42876501_-	ncRNA_intronic
CAediting_1198497	chr17_42876509_-	ncRNA_intronic
CAediting_1198498	chr17_42876542_-	ncRNA_intronic
CAediting_1198499	chr17_42876548_-	ncRNA_intronic
CAediting_1198500	chr17_42876564_-	ncRNA_intronic
CAediting_1198501	chr17_42876568_-	ncRNA_intronic
CAediting_1198502	chr17_42876577_-	ncRNA_intronic
CAediting_1198503	chr17_42876581_-	ncRNA_intronic
CAediting_1198504	chr17_42876582_-	ncRNA_intronic
CAediting_1198505	chr17_42876597_-	ncRNA_intronic
CAediting_1198506	chr17_42876598_-	ncRNA_intronic
CAediting_1198507	chr17_42876605_-	ncRNA_intronic
CAediting_1198508	chr17_42876607_-	ncRNA_intronic
CAediting_1198509	chr17_42876608_-	ncRNA_intronic
CAediting_1198510	chr17_42876631_-	ncRNA_intronic
CAediting_1198511	chr17_42876655_-	ncRNA_intronic
CAediting_1198512	chr17_42876668_-	ncRNA_intronic
CAediting_1198513	chr17_42876671_-	ncRNA_intronic
CAediting_1198514	chr17_42876676_-	ncRNA_intronic
CAediting_1198515	chr17_42876677_-	ncRNA_intronic
CAediting_1198516	chr17_42876695_-	ncRNA_intronic
CAediting_1198517	chr17_42876726_-	ncRNA_intronic
CAediting_1198518	chr17_42876972_-	ncRNA_intronic
CAediting_1198519	chr17_42876992_-	ncRNA_intronic
CAediting_1198520	chr17_42877038_-	ncRNA_intronic
CAediting_1198521	chr17_42877074_-	ncRNA_intronic
CAediting_1198522	chr17_42877078_-	ncRNA_intronic
CAediting_1198523	chr17_42877080_-	ncRNA_intronic
CAediting_1198524	chr17_42877104_-	ncRNA_intronic
CAediting_1198525	chr17_42877105_-	ncRNA_intronic
CAediting_1198526	chr17_42877114_-	ncRNA_intronic
CAediting_1198527	chr17_42877134_-	ncRNA_intronic
CAediting_1198528	chr17_42877137_-	ncRNA_intronic
CAediting_1198529	chr17_42877160_-	ncRNA_intronic
CAediting_1198530	chr17_42877177_-	ncRNA_intronic
CAediting_1198531	chr17_42877182_-	ncRNA_intronic
CAediting_1198532	chr17_42877183_-	ncRNA_intronic
CAediting_1198533	chr17_42877189_-	ncRNA_intronic
CAediting_1198534	chr17_42877191_-	ncRNA_intronic
CAediting_1198535	chr17_42877199_-	ncRNA_intronic
CAediting_1198536	chr17_42877205_-	ncRNA_intronic
CAediting_1198537	chr17_42877747_-	ncRNA_intronic
CAediting_1198538	chr17_42877759_-	ncRNA_intronic
CAediting_1198539	chr17_42877760_-	ncRNA_intronic
CAediting_1198540	chr17_42877769_-	ncRNA_intronic
CAediting_1198541	chr17_42878086_-	ncRNA_intronic
CAediting_1198542	chr17_42878111_-	ncRNA_intronic
CAediting_1198543	chr17_42878131_-	ncRNA_intronic
CAediting_1198544	chr17_42878181_-	ncRNA_intronic
CAediting_1198545	chr17_42880525_-	ncRNA_intronic
CAediting_1198546	chr17_42880657_-	ncRNA_intronic
CAediting_1198547	chr17_42880661_-	ncRNA_intronic
CAediting_1198548	chr17_42880669_-	ncRNA_intronic
CAediting_1198549	chr17_42880686_-	ncRNA_intronic
CAediting_1198550	chr17_42880700_-	ncRNA_intronic
CAediting_1198551	chr17_42880743_-	ncRNA_intronic
CAediting_1198552	chr17_42880756_-	ncRNA_intronic
CAediting_1198553	chr17_42880764_-	ncRNA_intronic
CAediting_1198554	chr17_42881785_-	ncRNA_intronic
CAediting_1198555	chr17_42881789_-	ncRNA_intronic
CAediting_1198556	chr17_42881818_-	ncRNA_intronic
CAediting_1198557	chr17_42881819_-	ncRNA_intronic
CAediting_1198558	chr17_42881820_-	ncRNA_intronic
CAediting_1198559	chr17_42881821_-	ncRNA_intronic
CAediting_1198560	chr17_42881826_-	ncRNA_intronic
CAediting_1198561	chr17_42881851_-	ncRNA_intronic
CAediting_1198562	chr17_42881856_-	ncRNA_intronic
CAediting_1198563	chr17_42881874_-	ncRNA_intronic
CAediting_1198564	chr17_42881905_-	ncRNA_intronic
CAediting_1198565	chr17_42882337_-	ncRNA_intronic
CAediting_1198566	chr17_42882349_-	ncRNA_intronic
CAediting_1198567	chr17_42882350_-	ncRNA_intronic
CAediting_1198568	chr17_42882351_-	ncRNA_intronic
CAediting_1198569	chr17_42882359_-	ncRNA_intronic
CAediting_1198570	chr17_42882376_-	ncRNA_intronic
CAediting_1198571	chr17_42882377_-	ncRNA_intronic
CAediting_1198572	chr17_42882402_-	ncRNA_intronic
CAediting_1198573	chr17_42882414_-	ncRNA_intronic
CAediting_1198574	chr17_42882422_-	ncRNA_intronic
CAediting_1198575	chr17_42882447_-	ncRNA_intronic
CAediting_1198576	chr17_42882470_-	ncRNA_intronic
CAediting_1198577	chr17_42882479_-	ncRNA_intronic
CAediting_1198578	chr17_42882483_-	ncRNA_intronic
CAediting_1198579	chr17_42882486_-	ncRNA_intronic
CAediting_1198580	chr17_42882487_-	ncRNA_intronic
CAediting_1198581	chr17_42882501_-	ncRNA_intronic
CAediting_1198582	chr17_42882537_-	ncRNA_intronic
CAediting_1198583	chr17_42882547_-	ncRNA_intronic
CAediting_1198584	chr17_42882550_-	ncRNA_intronic
CAediting_1198585	chr17_42882552_-	ncRNA_intronic
CAediting_1198586	chr17_42882553_-	ncRNA_intronic
CAediting_1198587	chr17_42882563_-	ncRNA_intronic
CAediting_1198588	chr17_42882850_-	ncRNA_intronic
CAediting_1198589	chr17_42882862_-	ncRNA_intronic
CAediting_1198590	chr17_42882911_-	ncRNA_intronic
CAediting_1198591	chr17_42882915_-	ncRNA_intronic
CAediting_1198592	chr17_42882927_-	ncRNA_intronic
CAediting_1198593	chr17_42882941_-	ncRNA_intronic
CAediting_1198594	chr17_42882944_-	ncRNA_intronic
CAediting_1198595	chr17_42883100_-	ncRNA_intronic
CAediting_1198596	chr17_42883484_-	ncRNA_intronic
CAediting_1198597	chr17_42883531_-	ncRNA_intronic
CAediting_1198598	chr17_42883540_-	ncRNA_intronic
CAediting_1198599	chr17_42883543_-	ncRNA_intronic
CAediting_1198600	chr17_42883552_-	ncRNA_intronic
CAediting_1198601	chr17_42883553_-	ncRNA_intronic
CAediting_1198602	chr17_42883563_-	ncRNA_intronic
CAediting_1198603	chr17_42883587_-	ncRNA_intronic
CAediting_1198604	chr17_42883648_-	ncRNA_intronic
CAediting_1198605	chr17_42883656_-	ncRNA_intronic
CAediting_1198606	chr17_42883694_-	ncRNA_intronic
CAediting_1198607	chr17_42883705_-	ncRNA_intronic
CAediting_1198608	chr17_42883706_-	ncRNA_intronic
CAediting_1198609	chr17_42883719_-	ncRNA_intronic
CAediting_1198610	chr17_42883727_-	ncRNA_intronic
CAediting_1198611	chr17_42883728_-	ncRNA_intronic
CAediting_1198612	chr17_42883736_-	ncRNA_intronic
CAediting_1198613	chr17_42884342_-	ncRNA_intronic
CAediting_1198614	chr17_42884620_-	ncRNA_exonic
CAediting_1198615	chr17_42884637_-	ncRNA_exonic
CAediting_1198616	chr17_42884650_-	ncRNA_exonic
CAediting_1198617	chr17_42884663_-	ncRNA_exonic
CAediting_1198618	chr17_42884682_-	ncRNA_exonic
CAediting_1198619	chr17_42884753_-	ncRNA_intronic
CAediting_1198620	chr17_42884781_-	ncRNA_intronic
CAediting_1198621	chr17_42884789_-	ncRNA_intronic
CAediting_1198622	chr17_42884803_-	ncRNA_intronic
CAediting_1198623	chr17_42884808_-	ncRNA_intronic
CAediting_1198624	chr17_42884851_-	ncRNA_intronic
CAediting_1198625	chr17_42885555_-	ncRNA_intronic
CAediting_1198626	chr17_42885556_-	ncRNA_intronic
CAediting_1198627	chr17_42885559_-	ncRNA_intronic
CAediting_1198628	chr17_42885589_-	ncRNA_intronic
CAediting_1198629	chr17_42885598_-	ncRNA_intronic
CAediting_1198630	chr17_42885724_-	ncRNA_intronic
CAediting_1198631	chr17_42885729_-	ncRNA_intronic
CAediting_1198632	chr17_42885738_-	ncRNA_intronic
CAediting_1198633	chr17_42885878_-	ncRNA_intronic
CAediting_1198634	chr17_42885896_-	ncRNA_intronic
CAediting_1198635	chr17_42885905_-	ncRNA_intronic
CAediting_1198636	chr17_42885919_-	ncRNA_intronic
CAediting_1198637	chr17_42886065_-	ncRNA_intronic
CAediting_1198638	chr17_42886078_-	ncRNA_intronic
CAediting_1198639	chr17_42886079_-	ncRNA_intronic
CAediting_1198640	chr17_42886159_-	ncRNA_intronic
CAediting_1198641	chr17_42886166_-	ncRNA_intronic
CAediting_1198642	chr17_42886211_-	ncRNA_intronic
CAediting_1198643	chr17_42886212_-	ncRNA_intronic
CAediting_1198644	chr17_42887249_-	ncRNA_intronic
CAediting_1198645	chr17_42887407_-	ncRNA_intronic
CAediting_1198646	chr17_42887932_-	ncRNA_intronic
CAediting_1198647	chr17_42888233_-	ncRNA_intronic
CAediting_1198648	chr17_42888235_-	ncRNA_intronic
CAediting_1198649	chr17_42888247_-	ncRNA_intronic
CAediting_1198650	chr17_42888320_-	ncRNA_intronic
CAediting_1198651	chr17_42888323_-	ncRNA_intronic
CAediting_1198652	chr17_42888326_-	ncRNA_intronic
CAediting_1198653	chr17_42888372_-	ncRNA_intronic
CAediting_1198654	chr17_42888380_-	ncRNA_intronic
CAediting_1198655	chr17_42888444_-	ncRNA_intronic
CAediting_1198656	chr17_42888461_-	ncRNA_intronic
CAediting_1198657	chr17_42888992_-	ncRNA_intronic
CAediting_1198658	chr17_42888993_-	ncRNA_intronic
CAediting_1198659	chr17_42889007_-	ncRNA_intronic
CAediting_1198660	chr17_42890573_-	ncRNA_intronic
CAediting_1198661	chr17_42890579_-	ncRNA_intronic
CAediting_1198662	chr17_42890820_-	ncRNA_intronic
CAediting_1198663	chr17_42890852_-	ncRNA_intronic
CAediting_1198664	chr17_42890860_-	ncRNA_intronic
CAediting_1198665	chr17_42890866_-	ncRNA_intronic
CAediting_1198666	chr17_42890891_-	ncRNA_intronic
CAediting_1198667	chr17_42890928_-	ncRNA_intronic
CAediting_1198668	chr17_42891079_-	ncRNA_intronic
CAediting_1198669	chr17_42891112_-	ncRNA_intronic
CAediting_1198670	chr17_42891123_-	ncRNA_intronic
CAediting_1198671	chr17_42891158_-	ncRNA_intronic
CAediting_1198672	chr17_42891164_-	ncRNA_intronic
CAediting_1198673	chr17_42892392_-	ncRNA_intronic
CAediting_1198674	chr17_42892459_-	ncRNA_intronic
CAediting_1198675	chr17_42892465_-	ncRNA_intronic
CAediting_1198676	chr17_42892718_-	ncRNA_intronic
CAediting_1198677	chr17_42892769_-	ncRNA_intronic
CAediting_1198678	chr17_42892773_-	ncRNA_intronic
CAediting_1198679	chr17_42893990_-	ncRNA_intronic
CAediting_1198680	chr17_42894060_-	ncRNA_intronic
CAediting_1198681	chr17_42894834_-	ncRNA_intronic
CAediting_1198682	chr17_42894909_-	ncRNA_intronic
CAediting_1198683	chr17_42894984_-	ncRNA_intronic
CAediting_1198684	chr17_42894993_-	ncRNA_intronic
CAediting_1198685	chr17_42894996_-	ncRNA_intronic
CAediting_1198686	chr17_42895023_-	ncRNA_intronic
CAediting_1198687	chr17_42895066_-	ncRNA_intronic
CAediting_1198688	chr17_42895077_-	ncRNA_intronic
CAediting_1198689	chr17_42895769_-	ncRNA_intronic
CAediting_1198690	chr17_42895781_-	ncRNA_intronic
CAediting_1198691	chr17_42895804_-	ncRNA_intronic
CAediting_1198692	chr17_42895805_-	ncRNA_intronic
CAediting_1198693	chr17_42895914_-	ncRNA_intronic
CAediting_1198694	chr17_42895924_-	ncRNA_intronic
CAediting_1198695	chr17_42895942_-	ncRNA_intronic
CAediting_1198696	chr17_42895970_-	ncRNA_intronic
CAediting_1198697	chr17_42896099_-	ncRNA_intronic
CAediting_1198698	chr17_42896104_-	ncRNA_intronic
CAediting_1198699	chr17_42896105_-	ncRNA_intronic
CAediting_1198700	chr17_42896160_-	ncRNA_intronic
CAediting_1198701	chr17_42896175_-	ncRNA_intronic
CAediting_1198702	chr17_42896204_-	ncRNA_intronic
CAediting_1198703	chr17_42896539_-	ncRNA_intronic
CAediting_1198704	chr17_42896547_-	ncRNA_intronic
CAediting_1198705	chr17_42896608_-	ncRNA_intronic
CAediting_1198706	chr17_42896634_-	ncRNA_intronic
CAediting_1198707	chr17_42897297_-	ncRNA_intronic
CAediting_1198708	chr17_42897298_-	ncRNA_intronic
CAediting_1198709	chr17_42897299_-	ncRNA_intronic
CAediting_1198710	chr17_42897315_-	ncRNA_intronic
CAediting_1198711	chr17_42897368_-	ncRNA_intronic
CAediting_1198712	chr17_42897701_-	ncRNA_exonic
CAediting_1198713	chr17_42897702_-	ncRNA_exonic
CAediting_1198714	chr17_42897744_-	ncRNA_exonic
CAediting_1198715	chr17_42897798_-	ncRNA_exonic
CAediting_1198716	chr17_42897803_-	ncRNA_exonic
CAediting_1198717	chr17_42897884_-	ncRNA_exonic
CAediting_1198718	chr17_42897889_-	ncRNA_exonic
CAediting_1198719	chr17_42897894_-	ncRNA_exonic
CAediting_1198720	chr17_42897932_-	ncRNA_intronic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_1198427	chr17_42874760_-	SINE	Alu	AluY
CAediting_1198428	chr17_42874773_-	SINE	Alu	AluY
CAediting_1198429	chr17_42874785_-	SINE	Alu	AluY
CAediting_1198430	chr17_42874786_-	SINE	Alu	AluY
CAediting_1198431	chr17_42874787_-	SINE	Alu	AluY
CAediting_1198432	chr17_42874840_-	SINE	Alu	AluY
CAediting_1198433	chr17_42874862_-	SINE	Alu	AluY
CAediting_1198434	chr17_42874909_-	SINE	Alu	AluY
CAediting_1198435	chr17_42874910_-	SINE	Alu	AluY
CAediting_1198436	chr17_42874911_-	SINE	Alu	AluY
CAediting_1198437	chr17_42874921_-	SINE	Alu	AluY
CAediting_1198438	chr17_42874925_-	SINE	Alu	AluY
CAediting_1198439	chr17_42874970_-	SINE	Alu	AluY
CAediting_1198440	chr17_42874986_-	SINE	Alu	AluY
CAediting_1198441	chr17_42875019_-	SINE	Alu	AluY
CAediting_1198442	chr17_42875116_-	SINE	Alu	AluSq2
CAediting_1198443	chr17_42875134_-	SINE	Alu	AluSq2
CAediting_1198444	chr17_42875138_-	SINE	Alu	AluSq2
CAediting_1198445	chr17_42875146_-	SINE	Alu	AluSq2
CAediting_1198446	chr17_42875147_-	SINE	Alu	AluSq2
CAediting_1198447	chr17_42875185_-	SINE	Alu	AluSq2
CAediting_1198448	chr17_42875189_-	SINE	Alu	AluSq2
CAediting_1198449	chr17_42875202_-	SINE	Alu	AluSq2
CAediting_1198450	chr17_42875211_-	SINE	Alu	AluSq2
CAediting_1198451	chr17_42875212_-	SINE	Alu	AluSq2
CAediting_1198452	chr17_42875218_-	SINE	Alu	AluSq2
CAediting_1198453	chr17_42875234_-	SINE	Alu	AluSq2
CAediting_1198454	chr17_42875238_-	SINE	Alu	AluSq2
CAediting_1198455	chr17_42875241_-	SINE	Alu	AluSq2
CAediting_1198456	chr17_42875256_-	SINE	Alu	AluSq2
CAediting_1198457	chr17_42875275_-	SINE	Alu	AluSq2
CAediting_1198458	chr17_42875280_-	SINE	Alu	AluSq2
CAediting_1198459	chr17_42875281_-	SINE	Alu	AluSq2
CAediting_1198460	chr17_42875282_-	SINE	Alu	AluSq2
CAediting_1198461	chr17_42875288_-	SINE	Alu	AluSq2
CAediting_1198462	chr17_42875290_-	SINE	Alu	AluSq2
CAediting_1198463	chr17_42875291_-	SINE	Alu	AluSq2
CAediting_1198464	chr17_42875305_-	SINE	Alu	AluSq2
CAediting_1198465	chr17_42875314_-	SINE	Alu	AluSq2
CAediting_1198466	chr17_42875319_-	SINE	Alu	AluSq2
CAediting_1198467	chr17_42875351_-	SINE	Alu	AluSq2
CAediting_1198468	chr17_42875354_-	SINE	Alu	AluSq2
CAediting_1198469	chr17_42875359_-	SINE	Alu	AluSq2
CAediting_1198470	chr17_42875360_-	SINE	Alu	AluSq2
CAediting_1198471	chr17_42875378_-	SINE	Alu	AluSq2
CAediting_1198472	chr17_42875382_-	SINE	Alu	AluSq2
CAediting_1198473	chr17_42876025_-	SINE	Alu	AluSq2
CAediting_1198474	chr17_42876037_-	SINE	Alu	AluSq2
CAediting_1198475	chr17_42876038_-	SINE	Alu	AluSq2
CAediting_1198476	chr17_42876047_-	SINE	Alu	AluSq2
CAediting_1198477	chr17_42876065_-	SINE	Alu	AluSq2
CAediting_1198478	chr17_42876071_-	SINE	Alu	AluSq2
CAediting_1198479	chr17_42876097_-	SINE	Alu	AluSq2
CAediting_1198480	chr17_42876102_-	SINE	Alu	AluSq2
CAediting_1198481	chr17_42876116_-	SINE	Alu	AluSq2
CAediting_1198482	chr17_42876119_-	SINE	Alu	AluSq2
CAediting_1198483	chr17_42876132_-	SINE	Alu	AluSq2
CAediting_1198484	chr17_42876137_-	SINE	Alu	AluSq2
CAediting_1198485	chr17_42876159_-	SINE	Alu	AluSq2
CAediting_1198486	chr17_42876169_-	SINE	Alu	AluSq2
CAediting_1198487	chr17_42876172_-	SINE	Alu	AluSq2
CAediting_1198488	chr17_42876181_-	SINE	Alu	AluSq2
CAediting_1198489	chr17_42876194_-	SINE	Alu	AluSq2
CAediting_1198490	chr17_42876198_-	SINE	Alu	AluSq2
CAediting_1198491	chr17_42876199_-	SINE	Alu	AluSq2
CAediting_1198492	chr17_42876234_-	SINE	Alu	AluSq2
CAediting_1198493	chr17_42876235_-	SINE	Alu	AluSq2
CAediting_1198494	chr17_42876495_-	SINE	Alu	AluSq
CAediting_1198495	chr17_42876500_-	SINE	Alu	AluSq
CAediting_1198496	chr17_42876501_-	SINE	Alu	AluSq
CAediting_1198497	chr17_42876509_-	SINE	Alu	AluSq
CAediting_1198498	chr17_42876542_-	SINE	Alu	AluSq
CAediting_1198499	chr17_42876548_-	SINE	Alu	AluSq
CAediting_1198500	chr17_42876564_-	SINE	Alu	AluSq
CAediting_1198501	chr17_42876568_-	SINE	Alu	AluSq
CAediting_1198502	chr17_42876577_-	SINE	Alu	AluSq
CAediting_1198503	chr17_42876581_-	SINE	Alu	AluSq
CAediting_1198504	chr17_42876582_-	SINE	Alu	AluSq
CAediting_1198505	chr17_42876597_-	SINE	Alu	AluSq
CAediting_1198506	chr17_42876598_-	SINE	Alu	AluSq
CAediting_1198507	chr17_42876605_-	SINE	Alu	AluSq
CAediting_1198508	chr17_42876607_-	SINE	Alu	AluSq
CAediting_1198509	chr17_42876608_-	SINE	Alu	AluSq
CAediting_1198510	chr17_42876631_-	SINE	Alu	AluSq
CAediting_1198511	chr17_42876655_-	SINE	Alu	AluSq
CAediting_1198512	chr17_42876668_-	SINE	Alu	AluSq
CAediting_1198513	chr17_42876671_-	SINE	Alu	AluSq
CAediting_1198514	chr17_42876676_-	SINE	Alu	AluSq
CAediting_1198515	chr17_42876677_-	SINE	Alu	AluSq
CAediting_1198516	chr17_42876695_-	SINE	Alu	AluSq
CAediting_1198518	chr17_42876972_-	SINE	Alu	AluSz
CAediting_1198519	chr17_42876992_-	SINE	Alu	AluSz
CAediting_1198520	chr17_42877038_-	SINE	Alu	AluSz
CAediting_1198521	chr17_42877074_-	SINE	Alu	AluSz
CAediting_1198522	chr17_42877078_-	SINE	Alu	AluSz
CAediting_1198523	chr17_42877080_-	SINE	Alu	AluSz
CAediting_1198524	chr17_42877104_-	SINE	Alu	AluSz
CAediting_1198525	chr17_42877105_-	SINE	Alu	AluSz
CAediting_1198526	chr17_42877114_-	SINE	Alu	AluSz
CAediting_1198527	chr17_42877134_-	SINE	Alu	AluSz
CAediting_1198528	chr17_42877137_-	SINE	Alu	AluSz
CAediting_1198529	chr17_42877160_-	SINE	Alu	AluSz
CAediting_1198530	chr17_42877177_-	SINE	Alu	AluSz
CAediting_1198531	chr17_42877182_-	SINE	Alu	AluSz
CAediting_1198532	chr17_42877183_-	SINE	Alu	AluSz
CAediting_1198533	chr17_42877189_-	SINE	Alu	AluSz
CAediting_1198534	chr17_42877191_-	SINE	Alu	AluSz
CAediting_1198535	chr17_42877199_-	SINE	Alu	AluSz
CAediting_1198536	chr17_42877205_-	SINE	Alu	AluSz
CAediting_1198537	chr17_42877747_-	SINE	Alu	AluSx
CAediting_1198538	chr17_42877759_-	SINE	Alu	AluSx
CAediting_1198539	chr17_42877760_-	SINE	Alu	AluSx
CAediting_1198540	chr17_42877769_-	SINE	Alu	AluSx
CAediting_1198541	chr17_42878086_-	SINE	Alu	AluSx
CAediting_1198542	chr17_42878111_-	SINE	Alu	AluSx
CAediting_1198543	chr17_42878131_-	SINE	Alu	AluSx
CAediting_1198544	chr17_42878181_-	SINE	Alu	AluSx
CAediting_1198545	chr17_42880525_-	SINE	Alu	AluSp
CAediting_1198546	chr17_42880657_-	SINE	Alu	AluSp
CAediting_1198547	chr17_42880661_-	SINE	Alu	AluSp
CAediting_1198548	chr17_42880669_-	SINE	Alu	AluSp
CAediting_1198549	chr17_42880686_-	SINE	Alu	AluSp
CAediting_1198550	chr17_42880700_-	SINE	Alu	AluSp
CAediting_1198551	chr17_42880743_-	SINE	Alu	AluSp
CAediting_1198552	chr17_42880756_-	SINE	Alu	AluSp
CAediting_1198553	chr17_42880764_-	SINE	Alu	AluSp
CAediting_1198554	chr17_42881785_-	SINE	Alu	AluSx1
CAediting_1198555	chr17_42881789_-	SINE	Alu	AluSx1
CAediting_1198556	chr17_42881818_-	SINE	Alu	AluSx1
CAediting_1198557	chr17_42881819_-	SINE	Alu	AluSx1
CAediting_1198558	chr17_42881820_-	SINE	Alu	AluSx1
CAediting_1198559	chr17_42881821_-	SINE	Alu	AluSx1
CAediting_1198560	chr17_42881826_-	SINE	Alu	AluSx1
CAediting_1198561	chr17_42881851_-	SINE	Alu	AluSx1
CAediting_1198562	chr17_42881856_-	SINE	Alu	AluSx1
CAediting_1198563	chr17_42881874_-	SINE	Alu	AluSx1
CAediting_1198564	chr17_42881905_-	SINE	Alu	AluSx1
CAediting_1198565	chr17_42882337_-	SINE	Alu	AluJr
CAediting_1198566	chr17_42882349_-	SINE	Alu	AluJr
CAediting_1198567	chr17_42882350_-	SINE	Alu	AluJr
CAediting_1198568	chr17_42882351_-	SINE	Alu	AluJr
CAediting_1198569	chr17_42882359_-	SINE	Alu	AluJr
CAediting_1198570	chr17_42882376_-	SINE	Alu	AluJr
CAediting_1198571	chr17_42882377_-	SINE	Alu	AluJr
CAediting_1198572	chr17_42882402_-	SINE	Alu	AluJr
CAediting_1198573	chr17_42882414_-	SINE	Alu	AluJr
CAediting_1198574	chr17_42882422_-	SINE	Alu	AluJr
CAediting_1198575	chr17_42882447_-	SINE	Alu	AluJr
CAediting_1198576	chr17_42882470_-	SINE	Alu	AluJr
CAediting_1198577	chr17_42882479_-	SINE	Alu	AluJr
CAediting_1198578	chr17_42882483_-	SINE	Alu	AluJr
CAediting_1198579	chr17_42882486_-	SINE	Alu	AluJr
CAediting_1198580	chr17_42882487_-	SINE	Alu	AluJr
CAediting_1198581	chr17_42882501_-	SINE	Alu	AluJr
CAediting_1198582	chr17_42882537_-	SINE	Alu	AluJr
CAediting_1198583	chr17_42882547_-	SINE	Alu	AluJr
CAediting_1198584	chr17_42882550_-	SINE	Alu	AluJr
CAediting_1198585	chr17_42882552_-	SINE	Alu	AluJr
CAediting_1198586	chr17_42882553_-	SINE	Alu	AluJr
CAediting_1198587	chr17_42882563_-	SINE	Alu	AluJr
CAediting_1198588	chr17_42882850_-	SINE	Alu	AluSq2
CAediting_1198589	chr17_42882862_-	SINE	Alu	AluSq2
CAediting_1198590	chr17_42882911_-	SINE	Alu	AluSq2
CAediting_1198591	chr17_42882915_-	SINE	Alu	AluSq2
CAediting_1198592	chr17_42882927_-	SINE	Alu	AluSq2
CAediting_1198593	chr17_42882941_-	SINE	Alu	AluSq2
CAediting_1198594	chr17_42882944_-	SINE	Alu	AluSq2
CAediting_1198595	chr17_42883100_-	SINE	Alu	AluSq2
CAediting_1198596	chr17_42883484_-	SINE	Alu	AluSx
CAediting_1198597	chr17_42883531_-	SINE	Alu	AluSx
CAediting_1198598	chr17_42883540_-	SINE	Alu	AluSx
CAediting_1198599	chr17_42883543_-	SINE	Alu	AluSx
CAediting_1198600	chr17_42883552_-	SINE	Alu	AluSx
CAediting_1198601	chr17_42883553_-	SINE	Alu	AluSx
CAediting_1198602	chr17_42883563_-	SINE	Alu	AluSx
CAediting_1198603	chr17_42883587_-	SINE	Alu	AluSx
CAediting_1198604	chr17_42883648_-	SINE	Alu	AluSx
CAediting_1198605	chr17_42883656_-	SINE	Alu	AluSx
CAediting_1198606	chr17_42883694_-	SINE	Alu	AluSx
CAediting_1198607	chr17_42883705_-	SINE	Alu	AluSx
CAediting_1198608	chr17_42883706_-	SINE	Alu	AluSx
CAediting_1198609	chr17_42883719_-	SINE	Alu	AluSx
CAediting_1198610	chr17_42883727_-	SINE	Alu	AluSx
CAediting_1198611	chr17_42883728_-	SINE	Alu	AluSx
CAediting_1198612	chr17_42883736_-	SINE	Alu	AluSx
CAediting_1198613	chr17_42884342_-	DNA	hAT-Charlie	MER5B
CAediting_1198614	chr17_42884620_-	SINE	Alu	AluJb
CAediting_1198615	chr17_42884637_-	SINE	Alu	AluJb
CAediting_1198616	chr17_42884650_-	SINE	Alu	AluJb
CAediting_1198617	chr17_42884663_-	SINE	Alu	AluJb
CAediting_1198618	chr17_42884682_-	SINE	Alu	AluJb
CAediting_1198619	chr17_42884753_-	SINE	Alu	AluJb
CAediting_1198620	chr17_42884781_-	SINE	Alu	AluJb
CAediting_1198621	chr17_42884789_-	SINE	Alu	AluJb
CAediting_1198622	chr17_42884803_-	SINE	Alu	AluJb
CAediting_1198623	chr17_42884808_-	SINE	Alu	AluJb
CAediting_1198624	chr17_42884851_-	SINE	Alu	AluJb
CAediting_1198625	chr17_42885555_-	SINE	Alu	AluSx1
CAediting_1198626	chr17_42885556_-	SINE	Alu	AluSx1
CAediting_1198627	chr17_42885559_-	SINE	Alu	AluSx1
CAediting_1198628	chr17_42885589_-	SINE	Alu	AluSx1
CAediting_1198629	chr17_42885598_-	SINE	Alu	AluSx1
CAediting_1198630	chr17_42885724_-	SINE	Alu	AluSx1
CAediting_1198631	chr17_42885729_-	SINE	Alu	AluSx1
CAediting_1198632	chr17_42885738_-	SINE	Alu	AluSx1
CAediting_1198633	chr17_42885878_-	SINE	Alu	AluJb
CAediting_1198634	chr17_42885896_-	SINE	Alu	AluJb
CAediting_1198635	chr17_42885905_-	SINE	Alu	AluJb
CAediting_1198636	chr17_42885919_-	SINE	Alu	AluJb
CAediting_1198637	chr17_42886065_-	SINE	Alu	AluJb
CAediting_1198638	chr17_42886078_-	SINE	Alu	AluJb
CAediting_1198639	chr17_42886079_-	SINE	Alu	AluJb
CAediting_1198640	chr17_42886159_-	SINE	Alu	AluJb
CAediting_1198641	chr17_42886166_-	SINE	Alu	AluJb
CAediting_1198642	chr17_42886211_-	SINE	Alu	AluJb
CAediting_1198643	chr17_42886212_-	SINE	Alu	AluJb
CAediting_1198644	chr17_42887249_-	SINE	Alu	AluSq2
CAediting_1198645	chr17_42887407_-	SINE	Alu	AluSq2
CAediting_1198646	chr17_42887932_-	SINE	Alu	AluY
CAediting_1198647	chr17_42888233_-	SINE	Alu	AluJo
CAediting_1198648	chr17_42888235_-	SINE	Alu	AluJo
CAediting_1198649	chr17_42888247_-	SINE	Alu	AluJo
CAediting_1198650	chr17_42888320_-	SINE	Alu	AluJo
CAediting_1198651	chr17_42888323_-	SINE	Alu	AluJo
CAediting_1198652	chr17_42888326_-	SINE	Alu	AluJo
CAediting_1198653	chr17_42888372_-	SINE	Alu	AluJo
CAediting_1198654	chr17_42888380_-	SINE	Alu	AluJo
CAediting_1198655	chr17_42888444_-	SINE	Alu	AluJo
CAediting_1198656	chr17_42888461_-	SINE	Alu	AluJo
CAediting_1198657	chr17_42888992_-	SINE	Alu	AluSx1
CAediting_1198658	chr17_42888993_-	SINE	Alu	AluSx1
CAediting_1198659	chr17_42889007_-	SINE	Alu	AluSx1
CAediting_1198660	chr17_42890573_-	SINE	Alu	AluY
CAediting_1198661	chr17_42890579_-	SINE	Alu	AluY
CAediting_1198662	chr17_42890820_-	SINE	Alu	AluSc
CAediting_1198663	chr17_42890852_-	SINE	Alu	AluSc
CAediting_1198664	chr17_42890860_-	SINE	Alu	AluSc
CAediting_1198665	chr17_42890866_-	SINE	Alu	AluSc
CAediting_1198666	chr17_42890891_-	SINE	Alu	AluSc
CAediting_1198667	chr17_42890928_-	SINE	Alu	AluSc
CAediting_1198668	chr17_42891079_-	SINE	Alu	AluSc8
CAediting_1198669	chr17_42891112_-	SINE	Alu	AluSc8
CAediting_1198670	chr17_42891123_-	SINE	Alu	AluSc8
CAediting_1198671	chr17_42891158_-	SINE	Alu	AluSc8
CAediting_1198672	chr17_42891164_-	SINE	Alu	AluSc8
CAediting_1198673	chr17_42892392_-	SINE	Alu	AluSx
CAediting_1198674	chr17_42892459_-	SINE	Alu	AluSx
CAediting_1198675	chr17_42892465_-	SINE	Alu	AluSx
CAediting_1198676	chr17_42892718_-	SINE	Alu	AluSx
CAediting_1198677	chr17_42892769_-	SINE	Alu	AluSx
CAediting_1198678	chr17_42892773_-	SINE	Alu	AluSx
CAediting_1198679	chr17_42893990_-	SINE	Alu	AluSz
CAediting_1198680	chr17_42894060_-	SINE	Alu	AluSz
CAediting_1198681	chr17_42894834_-	SINE	Alu	AluJb
CAediting_1198682	chr17_42894909_-	SINE	Alu	AluJb
CAediting_1198683	chr17_42894984_-	SINE	Alu	AluJb
CAediting_1198684	chr17_42894993_-	SINE	Alu	AluJb
CAediting_1198685	chr17_42894996_-	SINE	Alu	AluJb
CAediting_1198686	chr17_42895023_-	SINE	Alu	AluJb
CAediting_1198687	chr17_42895066_-	SINE	Alu	AluJb
CAediting_1198688	chr17_42895077_-	SINE	Alu	AluJb
CAediting_1198689	chr17_42895769_-	SINE	Alu	AluJb
CAediting_1198690	chr17_42895781_-	SINE	Alu	AluJb
CAediting_1198691	chr17_42895804_-	SINE	Alu	AluJb
CAediting_1198692	chr17_42895805_-	SINE	Alu	AluJb
CAediting_1198693	chr17_42895914_-	SINE	Alu	AluSx1
CAediting_1198694	chr17_42895924_-	SINE	Alu	AluSx1
CAediting_1198695	chr17_42895942_-	SINE	Alu	AluSx1
CAediting_1198696	chr17_42895970_-	SINE	Alu	AluSx1
CAediting_1198697	chr17_42896099_-	SINE	Alu	AluSx1
CAediting_1198698	chr17_42896104_-	SINE	Alu	AluSx1
CAediting_1198699	chr17_42896105_-	SINE	Alu	AluSx1
CAediting_1198700	chr17_42896160_-	SINE	Alu	AluJb
CAediting_1198701	chr17_42896175_-	SINE	Alu	AluJb
CAediting_1198702	chr17_42896204_-	SINE	Alu	AluJb
CAediting_1198703	chr17_42896539_-	SINE	Alu	AluSq2
CAediting_1198704	chr17_42896547_-	SINE	Alu	AluSq2
CAediting_1198705	chr17_42896608_-	SINE	Alu	AluSq2
CAediting_1198706	chr17_42896634_-	SINE	Alu	AluSq2
CAediting_1198707	chr17_42897297_-	SINE	Alu	AluSx1
CAediting_1198708	chr17_42897298_-	SINE	Alu	AluSx1
CAediting_1198709	chr17_42897299_-	SINE	Alu	AluSx1
CAediting_1198710	chr17_42897315_-	SINE	Alu	AluSx1
CAediting_1198711	chr17_42897368_-	SINE	Alu	AluSx1
CAediting_1198712	chr17_42897701_-	SINE	Alu	AluJr
CAediting_1198713	chr17_42897702_-	SINE	Alu	AluJr
CAediting_1198714	chr17_42897744_-	SINE	Alu	AluJr
CAediting_1198715	chr17_42897798_-	SINE	Alu	AluJr
CAediting_1198716	chr17_42897803_-	SINE	Alu	AluJr
CAediting_1198717	chr17_42897884_-	SINE	Alu	AluJr
CAediting_1198718	chr17_42897889_-	SINE	Alu	AluJr
CAediting_1198719	chr17_42897894_-	SINE	Alu	AluJr
CAediting_1198720	chr17_42897932_-	SINE	Alu	AluJr

Top

RNA A-to-I editing events in the alternative splicing sites for LINC00671

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000213373.6.LINC00671.

Correlation between RNA A-to-I editing and PSI for ENSG00000213373.6.LINC00671.

Top

Differntial gene expression between RNA A-to-I edited versus non-edited samples for LINC00671

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

KIRC.CAediting_1198476.ENSG00000213373.LINC00671.png
Soverview

LIHC.CAediting_1198432.ENSG00000213373.LINC00671.png
Soverview

Top

Protein coding region RNA A-to-I editings for LINC00671

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

Top

The effects of the RNA editing to the miRNA binding sites for LINC00671

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1198432	chr17_42874840_-	ENSG00000213373.6	ENST00000301683.6	hsa-miR-3190-5p	42874835	42874841	7mer-m8	42874834	42874852	152	-22.63
CAediting_1198432	chr17_42874840_-	ENSG00000213373.6	ENST00000301683.6	hsa-miR-548s	42874836	42874842	7mer-m8	42874835	42874857	149	-13.99
CAediting_1198428	chr17_42874773_-	ENSG00000213373.6	ENST00000301683.6	hsa-miR-106a-3p	42874771	42874776	6mer	42874770	42874791	141	-21.13
CAediting_1198433	chr17_42874862_-	ENSG00000213373.6	ENST00000301683.6	hsa-miR-4530	42874860	42877978	8mer-1a	42874860	42877988	150	-22.36
CAediting_1198433	chr17_42874862_-	ENSG00000213373.6	ENST00000301683.6	hsa-miR-766-3p	42874858	42877976	8mer-1a	42874858	42877990	140	-13.75
CAediting_1198615	chr17_42884637_-	ENSG00000213373.6	ENST00000417193.4	hsa-miR-3622a-3p	42884633	42884640	8mer-1a	42884633	42884653	143	-16
CAediting_1198615	chr17_42884637_-	ENSG00000213373.6	ENST00000417193.4	hsa-miR-3622b-3p	42884633	42884640	8mer-1a	42884633	42884652	153	-20.92
CAediting_1198615	chr17_42884637_-	ENSG00000213373.6	ENST00000436546.1	hsa-miR-3622a-3p	42884633	42884640	8mer-1a	42884633	42884653	143	-16
CAediting_1198615	chr17_42884637_-	ENSG00000213373.6	ENST00000436546.1	hsa-miR-3622b-3p	42884633	42884640	8mer-1a	42884633	42884652	153	-20.92
CAediting_1198617	chr17_42884663_-	ENSG00000213373.6	ENST00000417193.4	hsa-miR-3940-3p	42884659	42884665	7mer-m8	42884658	42884679	140	-20.62
CAediting_1198617	chr17_42884663_-	ENSG00000213373.6	ENST00000436546.1	hsa-miR-3940-3p	42884659	42884665	7mer-m8	42884658	42884679	140	-20.62
CAediting_1198618	chr17_42884682_-	ENSG00000213373.6	ENST00000417193.4	hsa-miR-4640-3p	42884678	42884684	7mer-m8	42884677	42894577	152	-18.65
CAediting_1198618	chr17_42884682_-	ENSG00000213373.6	ENST00000436546.1	hsa-miR-4640-3p	42884678	42884684	7mer-m8	42884677	42894577	152	-18.65
CAediting_1198429	chr17_42874785_-	ENSG00000213373.6	ENST00000301683.6	hsa-miR-3189-3p	42874784	42874790	7mer-m8	42874783	42874806	149	-20.43
CAediting_1198429	chr17_42874785_-	ENSG00000213373.6	ENST00000301683.6	hsa-miR-6813-3p	42874783	42874789	7mer-m8	42874782	42874802	140	-15.63
CAediting_1198430	chr17_42874786_-	ENSG00000213373.6	ENST00000301683.6	hsa-miR-326	42874784	42874790	7mer-m8	42874783	42874802	140	-14.14
CAediting_1198430	chr17_42874786_-	ENSG00000213373.6	ENST00000301683.6	hsa-miR-330-5p	42874784	42874790	7mer-m8	42874783	42874804	140	-22.24
CAediting_1198430	chr17_42874786_-	ENSG00000213373.6	ENST00000301683.6	hsa-miR-4314	42874785	42874791	7mer-m8	42874784	42874801	140	-18.79
CAediting_1198430	chr17_42874786_-	ENSG00000213373.6	ENST00000301683.6	hsa-miR-514a-5p	42874783	42874789	7mer-m8	42874782	42874802	154	-19.8
CAediting_1198616	chr17_42884650_-	ENSG00000213373.6	ENST00000417193.4	hsa-miR-28-5p	42884645	42884651	7mer-m8	42884644	42884664	151	-22.03
CAediting_1198616	chr17_42884650_-	ENSG00000213373.6	ENST00000417193.4	hsa-miR-3139	42884645	42884651	7mer-m8	42884644	42884666	165	-26.52
CAediting_1198616	chr17_42884650_-	ENSG00000213373.6	ENST00000417193.4	hsa-miR-708-5p	42884645	42884651	7mer-m8	42884644	42884665	150	-22.21
CAediting_1198616	chr17_42884650_-	ENSG00000213373.6	ENST00000436546.1	hsa-miR-28-5p	42884645	42884651	7mer-m8	42884644	42884664	151	-22.03
CAediting_1198616	chr17_42884650_-	ENSG00000213373.6	ENST00000436546.1	hsa-miR-3139	42884645	42884651	7mer-m8	42884644	42884666	165	-26.52
CAediting_1198616	chr17_42884650_-	ENSG00000213373.6	ENST00000436546.1	hsa-miR-708-5p	42884645	42884651	7mer-m8	42884644	42884665	150	-22.21
CAediting_1198712	chr17_42897701_-	ENSG00000213373.6	ENST00000301683.6	hsa-miR-383-3p	42897696	42897702	7mer-m8	42897695	42897715	144	-19.36
CAediting_1198431	chr17_42874787_-	ENSG00000213373.6	ENST00000301683.6	hsa-miR-6771-5p	42874785	42874792	8mer-1a	42874785	42874806	159	-28.55

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1198717	chr17_42897884_-	ENSG00000213373.6	ENST00000301683.6	hsa-miR-1184	42897883	42897888	6mer	42897882	42897906	140	-22.89
CAediting_1198717	chr17_42897884_-	ENSG00000213373.6	ENST00000301683.6	hsa-miR-17-3p	42897883	42897889	7mer-m8	42897882	42897903	150	-16.44
CAediting_1198431	chr17_42874787_-	ENSG00000213373.6	ENST00000301683.6	hsa-miR-30b-3p	42874786	42874793	8mer-1a	42874786	42874807	147	-15.96
CAediting_1198718	chr17_42897889_-	ENSG00000213373.6	ENST00000301683.6	hsa-miR-3174	42897887	42897892	6mer	42897886	42897907	142	-20.02
CAediting_1198431	chr17_42874787_-	ENSG00000213373.6	ENST00000301683.6	hsa-miR-3689a-3p	42874786	42874793	8mer-1a	42874786	42874807	141	-19.53
CAediting_1198431	chr17_42874787_-	ENSG00000213373.6	ENST00000301683.6	hsa-miR-3689b-3p	42874786	42874793	8mer-1a	42874786	42874807	141	-19.58
CAediting_1198431	chr17_42874787_-	ENSG00000213373.6	ENST00000301683.6	hsa-miR-3689c	42874786	42874793	8mer-1a	42874786	42874807	141	-19.58
CAediting_1198712	chr17_42897701_-	ENSG00000213373.6	ENST00000301683.6	hsa-miR-4310	42897696	42897702	7mer-m8	42897695	42897710	140	-8.38
CAediting_1198719	chr17_42897894_-	ENSG00000213373.6	ENST00000301683.6	hsa-miR-4679	42897893	42897899	7mer-m8	42897892	42897913	145	-13.55
CAediting_1198716	chr17_42897803_-	ENSG00000213373.6	ENST00000301683.6	hsa-miR-5589-5p	42897801	42897807	7mer-m8	42897800	42897822	153	-21.02
CAediting_1198427	chr17_42874760_-	ENSG00000213373.6	ENST00000301683.6	hsa-miR-5693	42874757	42874763	7mer-m8	42874756	42874777	150	-23.81
CAediting_1198431	chr17_42874787_-	ENSG00000213373.6	ENST00000301683.6	hsa-miR-6779-5p	42874786	42874793	8mer-1a	42874786	42874809	147	-25.77
CAediting_1198712	chr17_42897701_-	ENSG00000213373.6	ENST00000301683.6	hsa-miR-7157-5p	42897696	42897702	7mer-m8	42897695	42897717	152	-19.38
CAediting_1198430	chr17_42874786_-	ENSG00000213373.6	ENST00000301683.6	hsa-miR-887-5p	42874785	42874792	8mer-1a	42874785	42874805	147	-13.95
CAediting_1198431	chr17_42874787_-	ENSG00000213373.6	ENST00000301683.6	hsa-miR-887-5p	42874785	42874792	8mer-1a	42874785	42874805	147	-13.95
CAediting_1198618	chr17_42884682_-	ENSG00000213373.6	ENST00000417193.4	hsa-miR-4723-3p	42884680	42884686	7mer-m8	42884679	42894579	140	-16.32
CAediting_1198614	chr17_42884620_-	ENSG00000213373.6	ENST00000436546.1	hsa-miR-4649-3p	42884619	42884625	7mer-m8	42884618	42884638	147	-16.14
CAediting_1198618	chr17_42884682_-	ENSG00000213373.6	ENST00000436546.1	hsa-miR-4723-3p	42884680	42884686	7mer-m8	42884679	42894579	140	-16.32

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_393	chr1_1167164_+	ENSG00000213373.6	ENST00000301683.6	hsa-miR-200b-3p	42879247	42879253	7mer-m8	42879246	42879267	140	-10.69
CAediting_1054808	chr15_66496985_-	ENSG00000213373.6	ENST00000301683.6	hsa-miR-4512	42879353	42879359	7mer-m8	42879352	42879373	148	-19.75
CAediting_1229413	chr17_67471544_+	ENSG00000213373.6	ENST00000301683.6	hsa-miR-548aa	42898681	42898687	7mer-m8	42898680	42898704	145	-11.2
CAediting_1351755	chr19_40282625_-	ENSG00000213373.6	ENST00000301683.6	hsa-miR-641	42874696	42874703	8mer-1a	42874696	42874720	151	-15.67
CAediting_86358	chr1_109598906_+	ENSG00000213373.6	ENST00000301683.6	hsa-miR-197-5p	42874801	42874807	7mer-m8	42874800	42874823	152	-30.22
CAediting_1229413	chr17_67471544_+	ENSG00000213373.6	ENST00000417193.4	hsa-miR-548aa	42898681	42898686	6mer	42898680	42898700	145	-11.2
CAediting_1229413	chr17_67471544_+	ENSG00000213373.6	ENST00000436546.1	hsa-miR-548aa	42898681	42898687	7mer-m8	42898680	42898704	145	-11.2

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_468389	chr6_31355314_-	ENSG00000213373.6	ENST00000301683.6	hsa-miR-6891-5p	42879384	42879390	7mer-m8	42879383	42879403	148	-19.34

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for LINC00671

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST

ENST type

RNA structure without RNA A-to-I editing.

RNA structure with RNA A-to-I editing.

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID

ENST

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

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Relation with ADAR for LINC00671

Correlation between ADAR gene expression and RNA editing frequency

Cancer	CAeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
KIRP	CAediting_1198432	chr17_42874840_-	.	.	0.016194727497737	0.246146405933345	.	.

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Relation with cancer stages for LINC00671

Correlation between Cancer stages and RNA editing frequency

Cancer	Stage_type	CAeditomID	position	P-val	Coeff.
KIRC	pathologic_stage	CAediting_1198528	chr17_42877137_-	0.00189816925331424	0.332161376583928
KIRC	pathologic_stage	CAediting_1198536	chr17_42877205_-	0.0481383329471642	0.162733475704039

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Relation with survival for LINC00671

Correlation between RNA editing and survival

Cancer

CAeditomID

position

KMpvalue

Coxpvalue

CoxHR

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RelatedDrugs for LINC00671

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for LINC00671

Diseases associated with this gene.
(DisGeNet 7.0)

Gene	Disease ID	Disease name	# pubmeds	Source
LINC00671	C0006142	Malignant neoplasm of breast	1	CTD_human
LINC00671	C0678222	Breast Carcinoma	1	CTD_human
LINC00671	C1257931	Mammary Neoplasms, Human	1	CTD_human
LINC00671	C1458155	Mammary Neoplasms	1	CTD_human
LINC00671	C4704874	Mammary Carcinoma, Human	1	CTD_human

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene