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Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with cancer stages

Soverview

Relation with survival state

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene

Editing gene: TMEM220 (CAeditome ID:388335)

Gene summary for TMEM220

check button Gene summary
Gene informationGene symbol

TMEM220

Gene ID

388335

Gene nametransmembrane protein 220
Synonyms-
Cytomap

17p13.1

Type of geneprotein-coding
Descriptiontransmembrane protein 220
Modification date20210518
UniProtAcc

Q6QAJ8

Context

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID

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RNA A-to-I events for TMEM220

check buttonRNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.
all structure

check button RNA editing frequencies across 33 cancers of gene: ENSG00000187824.7
boxplot

check button RNA A-to-I editing events in Cancer.
CAediting_1163750(10713026, -), CAediting_1163751(10713027, -), CAediting_1163752(10713149, -), CAediting_1163753(10713159, -), CAediting_1163754(10713162, -), CAediting_1163755(10713163, -), CAediting_1163756(10713171, -), CAediting_1163757(10713188, -), CAediting_1163758(10713189, -), CAediting_1163759(10713211, -), CAediting_1163760(10713214, -), CAediting_1163761(10713224, -), CAediting_1163762(10713245, -), CAediting_1163763(10713267, -), CAediting_1163764(10714639, -), CAediting_1163765(10714648, -), CAediting_1163766(10714659, -), CAediting_1163767(10714661, -), CAediting_1163768(10714664, -), CAediting_1163769(10714673, -), CAediting_1163770(10714674, -), CAediting_1163771(10714688, -), CAediting_1163772(10714700, -), CAediting_1163773(10714701, -), CAediting_1163774(10714706, -), CAediting_1163775(10714726, -), CAediting_1163776(10714746, -), CAediting_1163777(10714750, -), CAediting_1163778(10714752, -), CAediting_1163779(10714789, -), CAediting_1163780(10714796, -), CAediting_1163781(10714797, -), CAediting_1163782(10714799, -), CAediting_1163783(10714809, -), CAediting_1163784(10714812, -), CAediting_1163785(10714813, -), CAediting_1163786(10714826, -), CAediting_1163787(10714839, -), CAediting_1163788(10714860, -), CAediting_1163789(10714872, -), CAediting_1163790(10714875, -), CAediting_1163791(10714878, -), CAediting_1163792(10714896, -), CAediting_1163793(10714908, -), CAediting_1163794(10714916, -), CAediting_1163795(10714918, -), CAediting_1163796(10714919, -), CAediting_1163797(10719406, -), CAediting_1163798(10719450, -), CAediting_1163799(10719461, -), CAediting_1163800(10719499, -), CAediting_1163801(10719500, -), CAediting_1163802(10719507, -), CAediting_1163803(10719532, -), CAediting_1163804(10719537, -), CAediting_1163805(10719540, -), CAediting_1163806(10719544, -), CAediting_1163807(10721429, -), CAediting_1163808(10721443, -), CAediting_1163809(10721497, -), CAediting_1163810(10721505, -), CAediting_1163811(10721519, -), CAediting_1163812(10721522, -), CAediting_1163813(10721558, -), CAediting_1163814(10722082, -), CAediting_1163815(10722089, -), CAediting_1163816(10722090, -), CAediting_1163817(10722098, -), CAediting_1163818(10722103, -), CAediting_1163819(10722121, -), CAediting_1163820(10722125, -), CAediting_1163821(10722130, -), CAediting_1163822(10722131, -), CAediting_1163823(10722153, -), CAediting_1163824(10722274, -), CAediting_1163825(10722290, -), CAediting_1163826(10723048, -), CAediting_1163827(10723049, -), CAediting_1163828(10723057, -), CAediting_1163829(10723066, -), CAediting_1163830(10723077, -), CAediting_1163831(10723078, -), CAediting_1163832(10723086, -), CAediting_1163833(10723092, -), CAediting_1163834(10723096, -), CAediting_1163835(10723109, -), CAediting_1163836(10723113, -), CAediting_1163837(10723119, -), CAediting_1163838(10723145, -), CAediting_1163839(10723174, -), CAediting_1163840(10723175, -), CAediting_1163841(10723176, -), CAediting_1163842(10723200, -), CAediting_1163843(10723208, -), CAediting_1163844(10723221, -), CAediting_1163845(10724417, -), CAediting_1163846(10724468, -), CAediting_1163847(10724520, -), CAediting_1163848(10727208, -), CAediting_1163849(10727236, -), CAediting_1163850(10727255, -), CAediting_1163851(10727282, -), CAediting_1163852(10727300, -), CAediting_1163853(10727898, -), CAediting_1163854(10727902, -), CAediting_1163855(10727904, -), CAediting_1163856(10727944, -), CAediting_1163857(10727956, -), CAediting_1163858(10727968, -), CAediting_1163859(10727969, -), CAediting_1163860(10727989, -), CAediting_1163861(10727995, -), CAediting_1163862(10728038, -), CAediting_1163863(10728048, -), CAediting_1163864(10728084, -), CAediting_1163865(10728097, -), CAediting_1163866(10728113, -), CAediting_1163867(10728114, -), CAediting_1163868(10728385, -), CAediting_1163869(10728391, -), CAediting_1163870(10728394, -), CAediting_1163871(10728401, -), CAediting_1163872(10728420, -), CAediting_1163873(10728423, -), CAediting_1163874(10728429, -), CAediting_1163875(10728434, -), CAediting_1163876(10728437, -), CAediting_1163877(10728441, -), CAediting_1163878(10728448, -), CAediting_1163879(10728470, -), CAediting_1163880(10728474, -), CAediting_1163881(10728477, -), CAediting_1163882(10728478, -), CAediting_1163883(10728481, -), CAediting_1163884(10728483, -), CAediting_1163885(10728488, -), CAediting_1163886(10728490, -), CAediting_1163887(10728493, -), CAediting_1163888(10728505, -), CAediting_1163889(10728512, -), CAediting_1163890(10728514, -), CAediting_1163891(10728518, -), CAediting_1163892(10728524, -), CAediting_1163893(10728529, -), CAediting_1163894(10728548, -), CAediting_1163895(10728562, -), CAediting_1163896(10728584, -), CAediting_1163897(10728592, -), CAediting_1163898(10728764, -), CAediting_1163899(10728959, -),

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RNA editing positional annotations for TMEM220 using Annovar

check button Protein coding RNA editing(s).
CAeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred

check button Gene structure information of RNA editing(s).
CAeditome IDPositionVariant type
CAediting_1163750chr17_10713026_-intronic
CAediting_1163751chr17_10713027_-intronic
CAediting_1163752chr17_10713149_-intronic
CAediting_1163753chr17_10713159_-intronic
CAediting_1163754chr17_10713162_-intronic
CAediting_1163755chr17_10713163_-intronic
CAediting_1163756chr17_10713171_-intronic
CAediting_1163757chr17_10713188_-intronic
CAediting_1163758chr17_10713189_-intronic
CAediting_1163759chr17_10713211_-intronic
CAediting_1163760chr17_10713214_-intronic
CAediting_1163761chr17_10713224_-intronic
CAediting_1163762chr17_10713245_-intronic
CAediting_1163763chr17_10713267_-intronic
CAediting_1163764chr17_10714639_-UTR3
CAediting_1163765chr17_10714648_-UTR3
CAediting_1163766chr17_10714659_-UTR3
CAediting_1163767chr17_10714661_-UTR3
CAediting_1163768chr17_10714664_-UTR3
CAediting_1163769chr17_10714673_-UTR3
CAediting_1163770chr17_10714674_-UTR3
CAediting_1163771chr17_10714688_-UTR3
CAediting_1163772chr17_10714700_-UTR3
CAediting_1163773chr17_10714701_-UTR3
CAediting_1163774chr17_10714706_-UTR3
CAediting_1163775chr17_10714726_-UTR3
CAediting_1163776chr17_10714746_-UTR3
CAediting_1163777chr17_10714750_-UTR3
CAediting_1163778chr17_10714752_-UTR3
CAediting_1163779chr17_10714789_-UTR3
CAediting_1163780chr17_10714796_-UTR3
CAediting_1163781chr17_10714797_-UTR3
CAediting_1163782chr17_10714799_-UTR3
CAediting_1163783chr17_10714809_-UTR3
CAediting_1163784chr17_10714812_-UTR3
CAediting_1163785chr17_10714813_-UTR3
CAediting_1163786chr17_10714826_-UTR3
CAediting_1163787chr17_10714839_-UTR3
CAediting_1163788chr17_10714860_-UTR3
CAediting_1163789chr17_10714872_-UTR3
CAediting_1163790chr17_10714875_-UTR3
CAediting_1163791chr17_10714878_-UTR3
CAediting_1163792chr17_10714896_-UTR3
CAediting_1163793chr17_10714908_-UTR3
CAediting_1163794chr17_10714916_-UTR3
CAediting_1163795chr17_10714918_-UTR3
CAediting_1163796chr17_10714919_-UTR3
CAediting_1163797chr17_10719406_-ncRNA_intronic
CAediting_1163798chr17_10719450_-ncRNA_intronic
CAediting_1163799chr17_10719461_-ncRNA_intronic
CAediting_1163800chr17_10719499_-ncRNA_intronic
CAediting_1163801chr17_10719500_-ncRNA_intronic
CAediting_1163802chr17_10719507_-ncRNA_intronic
CAediting_1163803chr17_10719532_-ncRNA_intronic
CAediting_1163804chr17_10719537_-ncRNA_intronic
CAediting_1163805chr17_10719540_-ncRNA_intronic
CAediting_1163806chr17_10719544_-ncRNA_intronic
CAediting_1163807chr17_10721429_-ncRNA_intronic
CAediting_1163808chr17_10721443_-ncRNA_intronic
CAediting_1163809chr17_10721497_-ncRNA_intronic
CAediting_1163810chr17_10721505_-ncRNA_intronic
CAediting_1163811chr17_10721519_-ncRNA_intronic
CAediting_1163812chr17_10721522_-ncRNA_intronic
CAediting_1163813chr17_10721558_-ncRNA_intronic
CAediting_1163814chr17_10722082_-ncRNA_intronic
CAediting_1163815chr17_10722089_-ncRNA_intronic
CAediting_1163816chr17_10722090_-ncRNA_intronic
CAediting_1163817chr17_10722098_-ncRNA_intronic
CAediting_1163818chr17_10722103_-ncRNA_intronic
CAediting_1163819chr17_10722121_-ncRNA_intronic
CAediting_1163820chr17_10722125_-ncRNA_intronic
CAediting_1163821chr17_10722130_-ncRNA_intronic
CAediting_1163822chr17_10722131_-ncRNA_intronic
CAediting_1163823chr17_10722153_-ncRNA_intronic
CAediting_1163824chr17_10722274_-ncRNA_intronic
CAediting_1163825chr17_10722290_-ncRNA_intronic
CAediting_1163826chr17_10723048_-ncRNA_intronic
CAediting_1163827chr17_10723049_-ncRNA_intronic
CAediting_1163828chr17_10723057_-ncRNA_intronic
CAediting_1163829chr17_10723066_-ncRNA_intronic
CAediting_1163830chr17_10723077_-ncRNA_intronic
CAediting_1163831chr17_10723078_-ncRNA_intronic
CAediting_1163832chr17_10723086_-ncRNA_intronic
CAediting_1163833chr17_10723092_-ncRNA_intronic
CAediting_1163834chr17_10723096_-ncRNA_intronic
CAediting_1163835chr17_10723109_-ncRNA_intronic
CAediting_1163836chr17_10723113_-ncRNA_intronic
CAediting_1163837chr17_10723119_-ncRNA_intronic
CAediting_1163838chr17_10723145_-ncRNA_intronic
CAediting_1163839chr17_10723174_-ncRNA_intronic
CAediting_1163840chr17_10723175_-ncRNA_intronic
CAediting_1163841chr17_10723176_-ncRNA_intronic
CAediting_1163842chr17_10723200_-ncRNA_intronic
CAediting_1163843chr17_10723208_-ncRNA_intronic
CAediting_1163844chr17_10723221_-ncRNA_intronic
CAediting_1163845chr17_10724417_-ncRNA_intronic
CAediting_1163846chr17_10724468_-exonic
CAediting_1163847chr17_10724520_-ncRNA_intronic
CAediting_1163848chr17_10727208_-intronic
CAediting_1163849chr17_10727236_-intronic
CAediting_1163850chr17_10727255_-intronic
CAediting_1163851chr17_10727282_-intronic
CAediting_1163852chr17_10727300_-intronic
CAediting_1163853chr17_10727898_-intronic
CAediting_1163854chr17_10727902_-intronic
CAediting_1163855chr17_10727904_-intronic
CAediting_1163856chr17_10727944_-intronic
CAediting_1163857chr17_10727956_-intronic
CAediting_1163858chr17_10727968_-intronic
CAediting_1163859chr17_10727969_-intronic
CAediting_1163860chr17_10727989_-intronic
CAediting_1163861chr17_10727995_-intronic
CAediting_1163862chr17_10728038_-intronic
CAediting_1163863chr17_10728048_-intronic
CAediting_1163864chr17_10728084_-intronic
CAediting_1163865chr17_10728097_-intronic
CAediting_1163866chr17_10728113_-intronic
CAediting_1163867chr17_10728114_-intronic
CAediting_1163868chr17_10728385_-intronic
CAediting_1163869chr17_10728391_-intronic
CAediting_1163870chr17_10728394_-intronic
CAediting_1163871chr17_10728401_-intronic
CAediting_1163872chr17_10728420_-intronic
CAediting_1163873chr17_10728423_-intronic
CAediting_1163874chr17_10728429_-intronic
CAediting_1163875chr17_10728434_-intronic
CAediting_1163876chr17_10728437_-intronic
CAediting_1163877chr17_10728441_-intronic
CAediting_1163878chr17_10728448_-intronic
CAediting_1163879chr17_10728470_-intronic
CAediting_1163880chr17_10728474_-intronic
CAediting_1163881chr17_10728477_-intronic
CAediting_1163882chr17_10728478_-intronic
CAediting_1163883chr17_10728481_-intronic
CAediting_1163884chr17_10728483_-intronic
CAediting_1163885chr17_10728488_-intronic
CAediting_1163886chr17_10728490_-intronic
CAediting_1163887chr17_10728493_-intronic
CAediting_1163888chr17_10728505_-intronic
CAediting_1163889chr17_10728512_-intronic
CAediting_1163890chr17_10728514_-intronic
CAediting_1163891chr17_10728518_-intronic
CAediting_1163892chr17_10728524_-intronic
CAediting_1163893chr17_10728529_-intronic
CAediting_1163894chr17_10728548_-intronic
CAediting_1163895chr17_10728562_-intronic
CAediting_1163896chr17_10728584_-intronic
CAediting_1163897chr17_10728592_-intronic
CAediting_1163898chr17_10728764_-intronic
CAediting_1163899chr17_10728959_-intronic

check button Repat-regional RNA editing(s).
CAeditome IDPositionRepeat familyRepeat sub familyRepeat name
CAediting_1163750chr17_10713026_-SINEAluAluSx1
CAediting_1163751chr17_10713027_-SINEAluAluSx1
CAediting_1163752chr17_10713149_-SINEAluAluSx1
CAediting_1163753chr17_10713159_-SINEAluAluSx1
CAediting_1163754chr17_10713162_-SINEAluAluSx1
CAediting_1163755chr17_10713163_-SINEAluAluSx1
CAediting_1163756chr17_10713171_-SINEAluAluSx1
CAediting_1163757chr17_10713188_-SINEAluAluSx1
CAediting_1163758chr17_10713189_-SINEAluAluSx1
CAediting_1163759chr17_10713211_-SINEAluAluSx1
CAediting_1163760chr17_10713214_-SINEAluAluSx1
CAediting_1163761chr17_10713224_-SINEAluAluSx1
CAediting_1163762chr17_10713245_-SINEAluAluSx1
CAediting_1163763chr17_10713267_-SINEAluAluSx1
CAediting_1163764chr17_10714639_-SINEAluAluJb
CAediting_1163765chr17_10714648_-SINEAluAluJb
CAediting_1163766chr17_10714659_-SINEAluAluJb
CAediting_1163767chr17_10714661_-SINEAluAluJb
CAediting_1163768chr17_10714664_-SINEAluAluJb
CAediting_1163769chr17_10714673_-SINEAluAluJb
CAediting_1163770chr17_10714674_-SINEAluAluJb
CAediting_1163771chr17_10714688_-SINEAluAluJb
CAediting_1163772chr17_10714700_-SINEAluAluJb
CAediting_1163773chr17_10714701_-SINEAluAluJb
CAediting_1163774chr17_10714706_-SINEAluAluJb
CAediting_1163775chr17_10714726_-SINEAluAluJb
CAediting_1163776chr17_10714746_-SINEAluAluJb
CAediting_1163777chr17_10714750_-SINEAluAluJb
CAediting_1163778chr17_10714752_-SINEAluAluJb
CAediting_1163779chr17_10714789_-SINEAluAluJb
CAediting_1163780chr17_10714796_-SINEAluAluJb
CAediting_1163781chr17_10714797_-SINEAluAluJb
CAediting_1163782chr17_10714799_-SINEAluAluJb
CAediting_1163783chr17_10714809_-SINEAluAluJb
CAediting_1163784chr17_10714812_-SINEAluAluJb
CAediting_1163785chr17_10714813_-SINEAluAluJb
CAediting_1163786chr17_10714826_-SINEAluAluJb
CAediting_1163787chr17_10714839_-SINEAluAluJb
CAediting_1163788chr17_10714860_-SINEAluAluJb
CAediting_1163789chr17_10714872_-SINEAluAluJb
CAediting_1163790chr17_10714875_-SINEAluAluJb
CAediting_1163791chr17_10714878_-SINEAluAluJb
CAediting_1163792chr17_10714896_-SINEAluAluJb
CAediting_1163793chr17_10714908_-SINEAluAluJb
CAediting_1163794chr17_10714916_-SINEAluAluJb
CAediting_1163795chr17_10714918_-SINEAluAluJb
CAediting_1163796chr17_10714919_-SINEAluAluJb
CAediting_1163797chr17_10719406_-SINEAluAluSg
CAediting_1163798chr17_10719450_-SINEAluAluSg
CAediting_1163799chr17_10719461_-SINEAluAluSg
CAediting_1163800chr17_10719499_-SINEAluAluSg
CAediting_1163801chr17_10719500_-SINEAluAluSg
CAediting_1163802chr17_10719507_-SINEAluAluSg
CAediting_1163803chr17_10719532_-SINEAluAluSg
CAediting_1163804chr17_10719537_-SINEAluAluSg
CAediting_1163805chr17_10719540_-SINEAluAluSg
CAediting_1163806chr17_10719544_-SINEAluAluSg
CAediting_1163807chr17_10721429_-SINEAluAluSz
CAediting_1163808chr17_10721443_-SINEAluAluSz
CAediting_1163809chr17_10721497_-SINEAluAluSz
CAediting_1163810chr17_10721505_-SINEAluAluSz
CAediting_1163811chr17_10721519_-SINEAluAluSz
CAediting_1163812chr17_10721522_-SINEAluAluSz
CAediting_1163813chr17_10721558_-SINEAluAluSz
CAediting_1163814chr17_10722082_-SINEAluAluSx1
CAediting_1163815chr17_10722089_-SINEAluAluSx1
CAediting_1163816chr17_10722090_-SINEAluAluSx1
CAediting_1163817chr17_10722098_-SINEAluAluSx1
CAediting_1163818chr17_10722103_-SINEAluAluSx1
CAediting_1163819chr17_10722121_-SINEAluAluSx1
CAediting_1163820chr17_10722125_-SINEAluAluSx1
CAediting_1163821chr17_10722130_-SINEAluAluSx1
CAediting_1163822chr17_10722131_-SINEAluAluSx1
CAediting_1163823chr17_10722153_-SINEAluAluSx1
CAediting_1163824chr17_10722274_-SINEAluAluSx1
CAediting_1163825chr17_10722290_-SINEAluAluSx1
CAediting_1163826chr17_10723048_-SINEAluAluSc8
CAediting_1163827chr17_10723049_-SINEAluAluSc8
CAediting_1163828chr17_10723057_-SINEAluAluSc8
CAediting_1163829chr17_10723066_-SINEAluAluSc8
CAediting_1163830chr17_10723077_-SINEAluAluSc8
CAediting_1163831chr17_10723078_-SINEAluAluSc8
CAediting_1163832chr17_10723086_-SINEAluAluSc8
CAediting_1163833chr17_10723092_-SINEAluAluSc8
CAediting_1163834chr17_10723096_-SINEAluAluSc8
CAediting_1163835chr17_10723109_-SINEAluAluSc8
CAediting_1163836chr17_10723113_-SINEAluAluSc8
CAediting_1163837chr17_10723119_-SINEAluAluSc8
CAediting_1163838chr17_10723145_-SINEAluAluSc8
CAediting_1163839chr17_10723174_-SINEAluAluSc8
CAediting_1163840chr17_10723175_-SINEAluAluSc8
CAediting_1163841chr17_10723176_-SINEAluAluSc8
CAediting_1163842chr17_10723200_-SINEAluAluSc8
CAediting_1163843chr17_10723208_-SINEAluAluSc8
CAediting_1163844chr17_10723221_-SINEAluAluSc8
CAediting_1163845chr17_10724417_-SINEAluAluSg
CAediting_1163846chr17_10724468_-SINEAluAluSg
CAediting_1163847chr17_10724520_-SINEAluAluSg
CAediting_1163848chr17_10727208_-SINEAluFLAM_A
CAediting_1163849chr17_10727236_-SINEAluFLAM_A
CAediting_1163850chr17_10727255_-SINEAluFLAM_A
CAediting_1163851chr17_10727282_-SINEAluFLAM_A
CAediting_1163852chr17_10727300_-SINEAluFLAM_A
CAediting_1163853chr17_10727898_-SINEAluAluSp
CAediting_1163854chr17_10727902_-SINEAluAluSp
CAediting_1163855chr17_10727904_-SINEAluAluSp
CAediting_1163856chr17_10727944_-SINEAluAluSp
CAediting_1163857chr17_10727956_-SINEAluAluSp
CAediting_1163858chr17_10727968_-SINEAluAluSp
CAediting_1163859chr17_10727969_-SINEAluAluSp
CAediting_1163860chr17_10727989_-SINEAluAluSp
CAediting_1163861chr17_10727995_-SINEAluAluSp
CAediting_1163862chr17_10728038_-SINEAluAluSp
CAediting_1163863chr17_10728048_-SINEAluAluSp
CAediting_1163864chr17_10728084_-SINEAluAluSp
CAediting_1163865chr17_10728097_-SINEAluAluSp
CAediting_1163866chr17_10728113_-SINEAluAluSp
CAediting_1163867chr17_10728114_-SINEAluAluSp
CAediting_1163868chr17_10728385_-SINEAluAluSz
CAediting_1163869chr17_10728391_-SINEAluAluSz
CAediting_1163870chr17_10728394_-SINEAluAluSz
CAediting_1163871chr17_10728401_-SINEAluAluSz
CAediting_1163872chr17_10728420_-SINEAluAluSz
CAediting_1163873chr17_10728423_-SINEAluAluSz
CAediting_1163874chr17_10728429_-SINEAluAluSz
CAediting_1163875chr17_10728434_-SINEAluAluSz
CAediting_1163876chr17_10728437_-SINEAluAluSz
CAediting_1163877chr17_10728441_-SINEAluAluSz
CAediting_1163878chr17_10728448_-SINEAluAluSz
CAediting_1163879chr17_10728470_-SINEAluAluSz
CAediting_1163880chr17_10728474_-SINEAluAluSz
CAediting_1163881chr17_10728477_-SINEAluAluSz
CAediting_1163882chr17_10728478_-SINEAluAluSz
CAediting_1163883chr17_10728481_-SINEAluAluSz
CAediting_1163884chr17_10728483_-SINEAluAluSz
CAediting_1163885chr17_10728488_-SINEAluAluSz
CAediting_1163886chr17_10728490_-SINEAluAluSz
CAediting_1163887chr17_10728493_-SINEAluAluSz
CAediting_1163888chr17_10728505_-SINEAluAluSz
CAediting_1163889chr17_10728512_-SINEAluAluSz
CAediting_1163890chr17_10728514_-SINEAluAluSz
CAediting_1163891chr17_10728518_-SINEAluAluSz
CAediting_1163892chr17_10728524_-SINEAluAluSz
CAediting_1163893chr17_10728529_-SINEAluAluSz
CAediting_1163894chr17_10728548_-SINEAluAluSz
CAediting_1163895chr17_10728562_-SINEAluAluSz
CAediting_1163896chr17_10728584_-SINEAluAluSz
CAediting_1163897chr17_10728592_-SINEAluAluSz

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RNA A-to-I editing events in the alternative splicing sites for TMEM220

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeCAeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength
ESCAediting_1163763chr17_10713267_-10713265:107132873SS1+0iCTTTTTTTTTTTTTTTTGAGATG4.64CTTTTTTTTTTTTTTTTGAGGTG6.3
ESCAediting_1163847chr17_10724520_-10724500:107245223SS0+18iCTACAACTTCCGTCTCCCAGGTT7.28CTGCAACTTCCGTCTCCCAGGTT7.61
ESCAediting_1163864chr17_10728084_-10728076:107280845SS3+0iAGGTTTGAG-15.65GGGTTTGAG-19.51

check button Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000187824.7.TMEM220.

check button Correlation between RNA A-to-I editing and PSI for ENSG00000187824.7.TMEM220.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for TMEM220

check button Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.
boxplot

check button Correlation between RNA A-to-I editing and gene expression.
boxplot

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for TMEM220

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.


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The effects of the RNA editing to the miRNA binding sites for TMEM220

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_1163780chr17_10714796_-ENSG00000187824.7ENST00000341871hsa-miR-1228-3p10714791107147977mer-m81071479010714809145.00-18.66
CAediting_1163780chr17_10714796_-ENSG00000187824.7ENST00000341871hsa-miR-20b-3p10714796107148027mer-m81071479510714817145.00-14.75
CAediting_1163780chr17_10714796_-ENSG00000187824.7ENST00000455996hsa-miR-1228-3p10714791107147977mer-m81071479010714809145.00-18.66
CAediting_1163780chr17_10714796_-ENSG00000187824.7ENST00000455996hsa-miR-20b-3p10714796107148027mer-m81071479510714817145.00-14.75
CAediting_1163782chr17_10714799_-ENSG00000187824.7ENST00000341871hsa-miR-6516-5p10714796107148027mer-m81071479510714816143.00-13.85
CAediting_1163782chr17_10714799_-ENSG00000187824.7ENST00000455996hsa-miR-6516-5p10714796107148027mer-m81071479510714816143.00-13.85
CAediting_1163786chr17_10714826_-ENSG00000187824.7ENST00000341871hsa-miR-182710714821107148288mer-1a1071482110714839150.00-16.72
CAediting_1163786chr17_10714826_-ENSG00000187824.7ENST00000341871hsa-miR-1910-3p10714823107148286mer1071481610714835142.00-22.33
CAediting_1163786chr17_10714826_-ENSG00000187824.7ENST00000341871hsa-miR-4722-5p10714825107148317mer-m81071482410714850152.00-32.81
CAediting_1163786chr17_10714826_-ENSG00000187824.7ENST00000341871hsa-miR-6808-5p10714823107148297mer-m81071482210714843149.00-22.42
CAediting_1163786chr17_10714826_-ENSG00000187824.7ENST00000341871hsa-miR-6893-5p10714823107148297mer-m81071482210714842144.00-19.23
CAediting_1163786chr17_10714826_-ENSG00000187824.7ENST00000341871hsa-miR-94010714823107148297mer-m81071482210714842141.00-17.50
CAediting_1163786chr17_10714826_-ENSG00000187824.7ENST00000455996hsa-miR-182710714821107148288mer-1a1071482110714839150.00-16.72
CAediting_1163786chr17_10714826_-ENSG00000187824.7ENST00000455996hsa-miR-1910-3p10714823107148286mer1071481610714835142.00-22.33
CAediting_1163786chr17_10714826_-ENSG00000187824.7ENST00000455996hsa-miR-4722-5p10714825107148317mer-m81071482410714850152.00-32.81
CAediting_1163786chr17_10714826_-ENSG00000187824.7ENST00000455996hsa-miR-6808-5p10714823107148297mer-m81071482210714843149.00-22.42
CAediting_1163786chr17_10714826_-ENSG00000187824.7ENST00000455996hsa-miR-6893-5p10714823107148297mer-m81071482210714842144.00-19.23
CAediting_1163786chr17_10714826_-ENSG00000187824.7ENST00000455996hsa-miR-94010714823107148297mer-m81071482210714842141.00-17.50
CAediting_1163769chr17_10714673_-ENSG00000187824.7ENST00000341871hsa-miR-3189-3p10714672107146787mer-m81071467110714690145.00-19.31
CAediting_1163769chr17_10714673_-ENSG00000187824.7ENST00000341871hsa-miR-6813-3p10714671107146777mer-m81071467010714690140.00-16.10
CAediting_1163770chr17_10714674_-ENSG00000187824.7ENST00000341871hsa-miR-3192-5p10714673107146808mer-1a1071467310714692156.00-27.62
CAediting_1163770chr17_10714674_-ENSG00000187824.7ENST00000341871hsa-miR-32610714672107146787mer-m81071467110714690140.00-14.14
CAediting_1163770chr17_10714674_-ENSG00000187824.7ENST00000341871hsa-miR-330-5p10714672107146787mer-m81071467110714692140.00-21.34
CAediting_1163770chr17_10714674_-ENSG00000187824.7ENST00000341871hsa-miR-431410714673107146797mer-m81071467210714694142.00-24.79
CAediting_1163770chr17_10714674_-ENSG00000187824.7ENST00000341871hsa-miR-514a-5p10714671107146777mer-m81071467010714690154.00-19.44
CAediting_1163770chr17_10714674_-ENSG00000187824.7ENST00000341871hsa-miR-514a-5p10714671107146777mer-m81071467010714690154.00-19.44
CAediting_1163770chr17_10714674_-ENSG00000187824.7ENST00000341871hsa-miR-514a-5p10714671107146777mer-m81071467010714690154.00-19.44
CAediting_1163772chr17_10714700_-ENSG00000187824.7ENST00000341871hsa-miR-1211310714700107147067mer-m81071469910714716150.00-19.98
CAediting_1163772chr17_10714700_-ENSG00000187824.7ENST00000341871hsa-miR-453910714700107147067mer-m81071469910714720143.00-14.98
CAediting_1163772chr17_10714700_-ENSG00000187824.7ENST00000341871hsa-miR-607810714696107147038mer-1a1071469610714715152.00-19.52
CAediting_1163772chr17_10714700_-ENSG00000187824.7ENST00000455996hsa-miR-1211310714700107147067mer-m81071469910714716150.00-19.98
CAediting_1163772chr17_10714700_-ENSG00000187824.7ENST00000455996hsa-miR-453910714700107147067mer-m81071469910714720143.00-14.98
CAediting_1163772chr17_10714700_-ENSG00000187824.7ENST00000455996hsa-miR-607810714696107147038mer-1a1071469610714715152.00-19.52
CAediting_1163774chr17_10714706_-ENSG00000187824.7ENST00000341871hsa-miR-66510714706107147116mer1071470510714724141.00-20.83
CAediting_1163774chr17_10714706_-ENSG00000187824.7ENST00000341871hsa-miR-6840-3p10714705107147117mer-m81071470410714725151.00-18.29
CAediting_1163774chr17_10714706_-ENSG00000187824.7ENST00000455996hsa-miR-66510714706107147116mer1071470510714724141.00-20.83
CAediting_1163774chr17_10714706_-ENSG00000187824.7ENST00000455996hsa-miR-6840-3p10714705107147117mer-m81071470410714725151.00-18.29
CAediting_1163775chr17_10714726_-ENSG00000187824.7ENST00000341871hsa-miR-3940-3p10714722107147287mer-m81071472110714742150.00-22.79
CAediting_1163775chr17_10714726_-ENSG00000187824.7ENST00000341871hsa-miR-444210714725107147317mer-m81071472410714740154.00-21.17
CAediting_1163775chr17_10714726_-ENSG00000187824.7ENST00000455996hsa-miR-3940-3p10714722107147287mer-m81071472110714742150.00-22.79
CAediting_1163775chr17_10714726_-ENSG00000187824.7ENST00000455996hsa-miR-444210714725107147317mer-m81071472410714740154.00-21.17
CAediting_1163777chr17_10714750_-ENSG00000187824.7ENST00000341871hsa-miR-191310714745107147517mer-m81071474410714765140.00-16.67
CAediting_1163777chr17_10714750_-ENSG00000187824.7ENST00000455996hsa-miR-191310714745107147517mer-m81071474410714765140.00-16.67
CAediting_1163779chr17_10714789_-ENSG00000187824.7ENST00000341871hsa-miR-6722-5p10714786107147938mer-1a1071478610714805142.00-14.21
CAediting_1163779chr17_10714789_-ENSG00000187824.7ENST00000455996hsa-miR-6722-5p10714786107147938mer-1a1071478610714805142.00-14.21
CAediting_1163781chr17_10714797_-ENSG00000187824.7ENST00000341871hsa-miR-463610714794107147996mer1071479310714814148.00-14.89
CAediting_1163781chr17_10714797_-ENSG00000187824.7ENST00000455996hsa-miR-463610714794107147996mer1071479310714814148.00-14.89
CAediting_1163783chr17_10714809_-ENSG00000187824.7ENST00000341871hsa-miR-2682-3p10714807107148137mer-m81071480610714828147.00-16.46
CAediting_1163783chr17_10714809_-ENSG00000187824.7ENST00000341871hsa-miR-6781-3p10714807107148137mer-m81071480610714827140.00-13.59
CAediting_1163783chr17_10714809_-ENSG00000187824.7ENST00000341871hsa-miR-6819-3p10714805107148128mer-1a1071480510714825140.00-11.15
CAediting_1163783chr17_10714809_-ENSG00000187824.7ENST00000341871hsa-miR-6877-3p10714805107148128mer-1a1071480510714825140.00-16.00
CAediting_1163783chr17_10714809_-ENSG00000187824.7ENST00000455996hsa-miR-2682-3p10714807107148137mer-m81071480610714828147.00-16.46
CAediting_1163783chr17_10714809_-ENSG00000187824.7ENST00000455996hsa-miR-6781-3p10714807107148137mer-m81071480610714827140.00-13.59
CAediting_1163783chr17_10714809_-ENSG00000187824.7ENST00000455996hsa-miR-6819-3p10714805107148128mer-1a1071480510714825140.00-11.15
CAediting_1163783chr17_10714809_-ENSG00000187824.7ENST00000455996hsa-miR-6877-3p10714805107148128mer-1a1071480510714825140.00-16.00
CAediting_1163784chr17_10714812_-ENSG00000187824.7ENST00000341871hsa-miR-1343-3p10714809107148168mer-1a1071480910714830141.00-15.45
CAediting_1163784chr17_10714812_-ENSG00000187824.7ENST00000341871hsa-miR-516a-3p10714807107148137mer-m81071480610714823141.00-17.01
CAediting_1163784chr17_10714812_-ENSG00000187824.7ENST00000341871hsa-miR-516a-3p10714807107148137mer-m81071480610714823141.00-17.01
CAediting_1163784chr17_10714812_-ENSG00000187824.7ENST00000341871hsa-miR-516b-3p10714807107148137mer-m81071480610714823141.00-17.01
CAediting_1163784chr17_10714812_-ENSG00000187824.7ENST00000341871hsa-miR-516b-3p10714807107148137mer-m81071480610714823141.00-17.01
CAediting_1163784chr17_10714812_-ENSG00000187824.7ENST00000341871hsa-miR-6783-3p10714809107148168mer-1a1071480910714830141.00-18.33
CAediting_1163784chr17_10714812_-ENSG00000187824.7ENST00000341871hsa-miR-6852-5p10714810107148167mer-1a1071481010714830148.00-26.79
CAediting_1163784chr17_10714812_-ENSG00000187824.7ENST00000341871hsa-miR-7162-5p10714807107148137mer-m81071480610714823140.00-15.47
CAediting_1163784chr17_10714812_-ENSG00000187824.7ENST00000455996hsa-miR-1343-3p10714809107148168mer-1a1071480910714830141.00-15.45
CAediting_1163784chr17_10714812_-ENSG00000187824.7ENST00000455996hsa-miR-516a-3p10714807107148137mer-m81071480610714823141.00-17.01
CAediting_1163784chr17_10714812_-ENSG00000187824.7ENST00000455996hsa-miR-516a-3p10714807107148137mer-m81071480610714823141.00-17.01
CAediting_1163784chr17_10714812_-ENSG00000187824.7ENST00000455996hsa-miR-516b-3p10714807107148137mer-m81071480610714823141.00-17.01
CAediting_1163784chr17_10714812_-ENSG00000187824.7ENST00000455996hsa-miR-516b-3p10714807107148137mer-m81071480610714823141.00-17.01
CAediting_1163784chr17_10714812_-ENSG00000187824.7ENST00000455996hsa-miR-6783-3p10714809107148168mer-1a1071480910714830141.00-18.33
CAediting_1163784chr17_10714812_-ENSG00000187824.7ENST00000455996hsa-miR-6852-5p10714810107148167mer-1a1071481010714830148.00-26.79
CAediting_1163784chr17_10714812_-ENSG00000187824.7ENST00000455996hsa-miR-7162-5p10714807107148137mer-m81071480610714823140.00-15.47
CAediting_1163785chr17_10714813_-ENSG00000187824.7ENST00000341871hsa-miR-6771-5p10714812107148187mer-m81071481110714830152.00-30.53
CAediting_1163785chr17_10714813_-ENSG00000187824.7ENST00000455996hsa-miR-6771-5p10714812107148187mer-m81071481110714830152.00-30.53
CAediting_1163787chr17_10714839_-ENSG00000187824.7ENST00000341871hsa-miR-615-3p10714838107148447mer-m81071483710714858148.00-24.27
CAediting_1163787chr17_10714839_-ENSG00000187824.7ENST00000455996hsa-miR-615-3p10714838107148447mer-m81071483710714858148.00-24.27
CAediting_1163790chr17_10714875_-ENSG00000187824.7ENST00000341871hsa-miR-59110714872107148798mer-1a1071487210714891143.00-16.51
CAediting_1163790chr17_10714875_-ENSG00000187824.7ENST00000341871hsa-miR-6872-3p10714875107148817mer-m81071487410714893148.00-20.99
CAediting_1163790chr17_10714875_-ENSG00000187824.7ENST00000455996hsa-miR-59110714872107148798mer-1a1071487210714891143.00-16.51
CAediting_1163790chr17_10714875_-ENSG00000187824.7ENST00000455996hsa-miR-6872-3p10714875107148817mer-m81071487410714893148.00-20.99
CAediting_1163791chr17_10714878_-ENSG00000187824.7ENST00000341871hsa-miR-122-3p10714877107148826mer1071487610714896140.00-15.68
CAediting_1163791chr17_10714878_-ENSG00000187824.7ENST00000455996hsa-miR-122-3p10714877107148826mer1071487610714896140.00-15.68
CAediting_1163792chr17_10714896_-ENSG00000187824.7ENST00000341871hsa-miR-3940-3p10714892107148987mer-m81071489110714912140.00-19.38
CAediting_1163792chr17_10714896_-ENSG00000187824.7ENST00000455996hsa-miR-3940-3p10714892107148987mer-m81071489110714912140.00-19.38
CAediting_1163794chr17_10714916_-ENSG00000187824.7ENST00000341871hsa-miR-5002-3p10714911107149177mer-m81071491010714930147.00-13.53
CAediting_1163794chr17_10714916_-ENSG00000187824.7ENST00000455996hsa-miR-5002-3p10714911107149177mer-m81071491010714930147.00-13.53
CAediting_1163795chr17_10714918_-ENSG00000187824.7ENST00000341871hsa-miR-676-3p10714914107149207mer-m81071491310714933147.00-17.16
CAediting_1163795chr17_10714918_-ENSG00000187824.7ENST00000455996hsa-miR-676-3p10714914107149207mer-m81071491310714933147.00-17.16
CAediting_1163796chr17_10714919_-ENSG00000187824.7ENST00000341871hsa-miR-371b-5p10714916107149238mer-1a1071491610714937146.00-8.27
CAediting_1163796chr17_10714919_-ENSG00000187824.7ENST00000341871hsa-miR-373-5p10714916107149238mer-1a1071491610714937142.00-9.11
CAediting_1163796chr17_10714919_-ENSG00000187824.7ENST00000341871hsa-miR-514b-5p10714916107149216mer1071491510714936146.00-13.03
CAediting_1163796chr17_10714919_-ENSG00000187824.7ENST00000341871hsa-miR-616-5p10714916107149238mer-1a1071491610714937140.00-5.77
CAediting_1163796chr17_10714919_-ENSG00000187824.7ENST00000455996hsa-miR-371b-5p10714916107149238mer-1a1071491610714937146.00-8.27
CAediting_1163796chr17_10714919_-ENSG00000187824.7ENST00000455996hsa-miR-373-5p10714916107149238mer-1a1071491610714937142.00-9.11
CAediting_1163796chr17_10714919_-ENSG00000187824.7ENST00000455996hsa-miR-514b-5p10714916107149216mer1071491510714936146.00-13.03
CAediting_1163796chr17_10714919_-ENSG00000187824.7ENST00000455996hsa-miR-616-5p10714916107149238mer-1a1071491610714937140.00-5.77
CAediting_1163765chr17_10714648_-ENSG00000187824.7ENST00000341871hsa-miR-6770-3p10714645107146517mer-m81071464410714665150.00-18.97
CAediting_1163765chr17_10714648_-ENSG00000187824.7ENST00000341871hsa-miR-6770-3p10714645107146517mer-m81071464410714665150.00-18.97
CAediting_1163765chr17_10714648_-ENSG00000187824.7ENST00000341871hsa-miR-6770-3p10714645107146517mer-m81071464410714665150.00-18.97
CAediting_1163766chr17_10714659_-ENSG00000187824.7ENST00000341871hsa-miR-100-5p10714656107146627mer-m81071465510714677162.00-22.89
CAediting_1163766chr17_10714659_-ENSG00000187824.7ENST00000341871hsa-miR-99a-5p10714656107146627mer-m81071465510714678155.00-21.46
CAediting_1163766chr17_10714659_-ENSG00000187824.7ENST00000341871hsa-miR-99b-5p10714656107146627mer-m81071465510714678155.00-25.13
CAediting_1163767chr17_10714661_-ENSG00000187824.7ENST00000341871hsa-miR-106a-3p10714659107146646mer1071465810714679141.00-21.13

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_1163786chr17_10714826_-ENSG00000187824.7ENST00000341871hsa-let-7a-5p10714821107148288mer-1a1071482110714842154-19.77
CAediting_1163786chr17_10714826_-ENSG00000187824.7ENST00000341871hsa-let-7a-5p10714821107148288mer-1a1071482110714842154-19.77
CAediting_1163786chr17_10714826_-ENSG00000187824.7ENST00000341871hsa-let-7a-5p10714821107148288mer-1a1071482110714842154-19.77
CAediting_1163786chr17_10714826_-ENSG00000187824.7ENST00000341871hsa-let-7f-5p10714821107148288mer-1a1071482110714844154-16.79
CAediting_1163786chr17_10714826_-ENSG00000187824.7ENST00000341871hsa-let-7f-5p10714821107148288mer-1a1071482110714844154-16.79
CAediting_1163786chr17_10714826_-ENSG00000187824.7ENST00000341871hsa-let-7g-5p10714821107148288mer-1a1071482110714841148-17.51
CAediting_1163786chr17_10714826_-ENSG00000187824.7ENST00000341871hsa-let-7i-5p10714821107148288mer-1a1071482110714842152-17.76
CAediting_1163783chr17_10714809_-ENSG00000187824.7ENST00000341871hsa-miR-103a-1-5p10714807107148137mer-m81071480610714827152-16.92
CAediting_1163784chr17_10714812_-ENSG00000187824.7ENST00000341871hsa-miR-103a-1-5p10714807107148137mer-m81071480610714827152-16.92
CAediting_1163783chr17_10714809_-ENSG00000187824.7ENST00000341871hsa-miR-103a-2-5p10714807107148137mer-m81071480610714827152-17.8
CAediting_1163784chr17_10714812_-ENSG00000187824.7ENST00000341871hsa-miR-103a-2-5p10714807107148137mer-m81071480610714827152-17.8
CAediting_1163787chr17_10714839_-ENSG00000187824.7ENST00000341871hsa-miR-1199-5p10714838107148447mer-m81071483710714856152-29.98
CAediting_1163771chr17_10714688_-ENSG00000187824.7ENST00000341871hsa-miR-1211410714685107146917mer-m81071468410714702141-13.86
CAediting_1163774chr17_10714706_-ENSG00000187824.7ENST00000341871hsa-miR-1266-5p10714705107147106mer1071470410714727142-18.44
CAediting_1163764chr17_10714639_-ENSG00000187824.7ENST00000341871hsa-miR-1269a10714634107146407mer-m81071463310714653151-23.92
CAediting_1163764chr17_10714639_-ENSG00000187824.7ENST00000341871hsa-miR-1269b10714634107146407mer-m81071463310714653155-23.91
CAediting_1163785chr17_10714813_-ENSG00000187824.7ENST00000341871hsa-miR-1273h-5p10714812107148198mer-1a1071481210714832151-20.12
CAediting_1163778chr17_10714752_-ENSG00000187824.7ENST00000341871hsa-miR-128310714750107147578mer-1a1071475010714771147-11.59
CAediting_1163778chr17_10714752_-ENSG00000187824.7ENST00000341871hsa-miR-128310714750107147578mer-1a1071475010714771147-11.59
CAediting_1163764chr17_10714639_-ENSG00000187824.7ENST00000341871hsa-miR-1285-3p10714638107146447mer-m81071463710714658140-17.15
CAediting_1163764chr17_10714639_-ENSG00000187824.7ENST00000341871hsa-miR-1285-3p10714638107146447mer-m81071463710714658140-17.15
CAediting_1163788chr17_10714860_-ENSG00000187824.7ENST00000341871hsa-miR-1288-3p10714856107148627mer-m81071485510714876154-19.02
CAediting_1163788chr17_10714860_-ENSG00000187824.7ENST00000341871hsa-miR-17-3p10714859107148657mer-m81071485810714878153-19.67
CAediting_1163780chr17_10714796_-ENSG00000187824.7ENST00000341871hsa-miR-216b-3p10714791107147977mer-m81071479010714815151-20.43
CAediting_1163785chr17_10714813_-ENSG00000187824.7ENST00000341871hsa-miR-30b-3p10714812107148198mer-1a1071481210714833155-16.14
CAediting_1163775chr17_10714726_-ENSG00000187824.7ENST00000341871hsa-miR-311610714723107147297mer-m81071472210714744153-21.81
CAediting_1163775chr17_10714726_-ENSG00000187824.7ENST00000341871hsa-miR-311610714723107147297mer-m81071472210714744153-21.81
CAediting_1163771chr17_10714688_-ENSG00000187824.7ENST00000341871hsa-miR-313810714687107146937mer-m81071468610714709151-17.18
CAediting_1163787chr17_10714839_-ENSG00000187824.7ENST00000341871hsa-miR-3622a-3p10714834107148418mer-1a1071483410714855153-20.56
CAediting_1163785chr17_10714813_-ENSG00000187824.7ENST00000341871hsa-miR-3689a-3p10714812107148198mer-1a1071481210714834150-18.5
CAediting_1163785chr17_10714813_-ENSG00000187824.7ENST00000341871hsa-miR-3689b-3p10714812107148198mer-1a1071481210714834150-18.55
CAediting_1163785chr17_10714813_-ENSG00000187824.7ENST00000341871hsa-miR-3689c10714812107148198mer-1a1071481210714834150-18.55
CAediting_1163786chr17_10714826_-ENSG00000187824.7ENST00000341871hsa-miR-426610714826107148327mer-m81071482510714840140-14.01
CAediting_1163788chr17_10714860_-ENSG00000187824.7ENST00000341871hsa-miR-441810714858107148647mer-m81071485710714875149-14.72
CAediting_1163786chr17_10714826_-ENSG00000187824.7ENST00000341871hsa-miR-445810714821107148288mer-1a1071482110714839147-18.48
CAediting_1163793chr17_10714908_-ENSG00000187824.7ENST00000341871hsa-miR-448110714905107149117mer-m81071490410714921146-18.8
CAediting_1163786chr17_10714826_-ENSG00000187824.7ENST00000341871hsa-miR-450010714821107148288mer-1a1071482110714837151-15.74
CAediting_1163764chr17_10714639_-ENSG00000187824.7ENST00000341871hsa-miR-451510714634107146418mer-1a1071463410714656144-17.2
CAediting_1163774chr17_10714706_-ENSG00000187824.7ENST00000341871hsa-miR-451810714705107147106mer1071470410714730142-21.64
CAediting_1163771chr17_10714688_-ENSG00000187824.7ENST00000341871hsa-miR-4520-3p10714688107146947mer-m81071468710714712147-19.6
CAediting_1163775chr17_10714726_-ENSG00000187824.7ENST00000341871hsa-miR-4638-3p10714725107147317mer-m81071472410714746148-22.17
CAediting_1163793chr17_10714908_-ENSG00000187824.7ENST00000341871hsa-miR-464810714907107149137mer-m81071490610714925150-18.77
CAediting_1163793chr17_10714908_-ENSG00000187824.7ENST00000341871hsa-miR-4745-5p10714905107149117mer-m81071490410714926151-21.13
CAediting_1163771chr17_10714688_-ENSG00000187824.7ENST00000341871hsa-miR-4761-5p10714683107146897mer-m81071468210714705154-17.09
CAediting_1163788chr17_10714860_-ENSG00000187824.7ENST00000341871hsa-miR-509-3-5p10714858107148647mer-m81071485710714879149-19.64
CAediting_1163788chr17_10714860_-ENSG00000187824.7ENST00000341871hsa-miR-509-5p10714858107148647mer-m81071485710714877147-14.95
CAediting_1163788chr17_10714860_-ENSG00000187824.7ENST00000341871hsa-miR-509-5p10714858107148647mer-m81071485710714877147-14.95
CAediting_1163774chr17_10714706_-ENSG00000187824.7ENST00000341871hsa-miR-510-5p10714704107147107mer-m81071470310714724146-17.29
CAediting_1163792chr17_10714896_-ENSG00000187824.7ENST00000341871hsa-miR-5189-5p10714895107149017mer-m81071489410714916151-22.35
CAediting_1163764chr17_10714639_-ENSG00000187824.7ENST00000341871hsa-miR-5189-5p10714638107146447mer-m81071463710714658150-21.18
CAediting_1163777chr17_10714750_-ENSG00000187824.7ENST00000341871hsa-miR-519a-2-5p10714749107147557mer-m81071474810714768153-18.5
CAediting_1163778chr17_10714752_-ENSG00000187824.7ENST00000341871hsa-miR-519a-2-5p10714749107147557mer-m81071474810714768153-18.5
CAediting_1163777chr17_10714750_-ENSG00000187824.7ENST00000341871hsa-miR-520b-5p10714749107147557mer-m81071474810714768153-18.5
CAediting_1163778chr17_10714752_-ENSG00000187824.7ENST00000341871hsa-miR-520b-5p10714749107147557mer-m81071474810714768153-18.5
CAediting_1163792chr17_10714896_-ENSG00000187824.7ENST00000341871hsa-miR-61210714895107149017mer-m81071489410714918142-20.14
CAediting_1163764chr17_10714639_-ENSG00000187824.7ENST00000341871hsa-miR-61210714638107146447mer-m81071463710714660153-24.82
CAediting_1163780chr17_10714796_-ENSG00000187824.7ENST00000341871hsa-miR-6500-3p10714793107147997mer-m81071479210714812143-12.24
CAediting_1163781chr17_10714797_-ENSG00000187824.7ENST00000341871hsa-miR-6500-3p10714793107147997mer-m81071479210714812143-12.24
CAediting_1163792chr17_10714896_-ENSG00000187824.7ENST00000341871hsa-miR-66110714893107148997mer-m81071489210714914147-16.74
CAediting_1163776chr17_10714746_-ENSG00000187824.7ENST00000341871hsa-miR-6747-3p10714744107147507mer-m81071474310714763141-18.46
CAediting_1163787chr17_10714839_-ENSG00000187824.7ENST00000341871hsa-miR-6751-3p10714838107148447mer-m81071483710714857146-18.07
CAediting_1163776chr17_10714746_-ENSG00000187824.7ENST00000341871hsa-miR-6752-3p10714743107147497mer-m81071474210714762150-16.26
CAediting_1163785chr17_10714813_-ENSG00000187824.7ENST00000341871hsa-miR-6779-5p10714812107148198mer-1a1071481210714830152-23.37
CAediting_1163785chr17_10714813_-ENSG00000187824.7ENST00000341871hsa-miR-6780a-5p10714812107148198mer-1a1071481210714835148-22.01
CAediting_1163792chr17_10714896_-ENSG00000187824.7ENST00000341871hsa-miR-686010714895107149017mer-m81071489410714914154-24.08
CAediting_1163764chr17_10714639_-ENSG00000187824.7ENST00000341871hsa-miR-686010714638107146447mer-m81071463710714657148-21.86
CAediting_1163768chr17_10714664_-ENSG00000187824.7ENST00000341871hsa-miR-797710714664107146707mer-m81071466310714680140-13.07
CAediting_1163771chr17_10714688_-ENSG00000187824.7ENST00000341871hsa-miR-807110714686107146927mer-m81071468510714703145-18.44
CAediting_1163771chr17_10714688_-ENSG00000187824.7ENST00000341871hsa-miR-807110714686107146927mer-m81071468510714703145-18.44
CAediting_1163784chr17_10714812_-ENSG00000187824.7ENST00000341871hsa-miR-887-5p10714812107148187mer-m81071481110714832144-19.38
CAediting_1163785chr17_10714813_-ENSG00000187824.7ENST00000341871hsa-miR-887-5p10714812107148187mer-m81071481110714832144-19.38
CAediting_1163770chr17_10714674_-ENSG00000187824.7ENST00000341871hsa-miR-887-5p10714673107146808mer-1a1071467310714694154-16.45
CAediting_1163792chr17_10714896_-ENSG00000187824.7ENST00000341871hsa-miR-939-3p10714894107149007mer-m81071489310714913140-15.63
CAediting_1163786chr17_10714826_-ENSG00000187824.7ENST00000341871hsa-miR-98-5p10714821107148288mer-1a1071482110714842148-15.8
CAediting_1163786chr17_10714826_-ENSG00000187824.7ENST00000455996hsa-let-7a-5p10714821107148288mer-1a1071482110714842154-19.77
CAediting_1163786chr17_10714826_-ENSG00000187824.7ENST00000455996hsa-let-7a-5p10714821107148288mer-1a1071482110714842154-19.77
CAediting_1163786chr17_10714826_-ENSG00000187824.7ENST00000455996hsa-let-7a-5p10714821107148288mer-1a1071482110714842154-19.77
CAediting_1163786chr17_10714826_-ENSG00000187824.7ENST00000455996hsa-let-7f-5p10714821107148288mer-1a1071482110714844154-16.79
CAediting_1163786chr17_10714826_-ENSG00000187824.7ENST00000455996hsa-let-7f-5p10714821107148288mer-1a1071482110714844154-16.79
CAediting_1163786chr17_10714826_-ENSG00000187824.7ENST00000455996hsa-let-7g-5p10714821107148288mer-1a1071482110714841148-17.51
CAediting_1163786chr17_10714826_-ENSG00000187824.7ENST00000455996hsa-let-7i-5p10714821107148288mer-1a1071482110714842152-17.76
CAediting_1163783chr17_10714809_-ENSG00000187824.7ENST00000455996hsa-miR-103a-1-5p10714807107148137mer-m81071480610714827152-16.92
CAediting_1163784chr17_10714812_-ENSG00000187824.7ENST00000455996hsa-miR-103a-1-5p10714807107148137mer-m81071480610714827152-16.92
CAediting_1163783chr17_10714809_-ENSG00000187824.7ENST00000455996hsa-miR-103a-2-5p10714807107148137mer-m81071480610714827152-17.8
CAediting_1163784chr17_10714812_-ENSG00000187824.7ENST00000455996hsa-miR-103a-2-5p10714807107148137mer-m81071480610714827152-17.8
CAediting_1163787chr17_10714839_-ENSG00000187824.7ENST00000455996hsa-miR-1199-5p10714838107148447mer-m81071483710714856152-29.98
CAediting_1163771chr17_10714688_-ENSG00000187824.7ENST00000455996hsa-miR-1211410714685107146917mer-m81071468410714702141-13.86
CAediting_1163774chr17_10714706_-ENSG00000187824.7ENST00000455996hsa-miR-1266-5p10714705107147106mer1071470410714727142-18.44
CAediting_1163785chr17_10714813_-ENSG00000187824.7ENST00000455996hsa-miR-1273h-5p10714812107148198mer-1a1071481210714832151-20.12
CAediting_1163778chr17_10714752_-ENSG00000187824.7ENST00000455996hsa-miR-128310714750107147578mer-1a1071475010714771147-11.59
CAediting_1163778chr17_10714752_-ENSG00000187824.7ENST00000455996hsa-miR-128310714750107147578mer-1a1071475010714771147-11.59
CAediting_1163788chr17_10714860_-ENSG00000187824.7ENST00000455996hsa-miR-1288-3p10714856107148627mer-m81071485510714876154-19.02
CAediting_1163788chr17_10714860_-ENSG00000187824.7ENST00000455996hsa-miR-17-3p10714859107148657mer-m81071485810714878153-19.67
CAediting_1163780chr17_10714796_-ENSG00000187824.7ENST00000455996hsa-miR-216b-3p10714791107147977mer-m81071479010714815151-20.43
CAediting_1163785chr17_10714813_-ENSG00000187824.7ENST00000455996hsa-miR-30b-3p10714812107148198mer-1a1071481210714833155-16.14
CAediting_1163775chr17_10714726_-ENSG00000187824.7ENST00000455996hsa-miR-311610714723107147297mer-m81071472210714744153-21.81
CAediting_1163775chr17_10714726_-ENSG00000187824.7ENST00000455996hsa-miR-311610714723107147297mer-m81071472210714744153-21.81
CAediting_1163771chr17_10714688_-ENSG00000187824.7ENST00000455996hsa-miR-313810714687107146937mer-m81071468610714709151-17.18
CAediting_1163787chr17_10714839_-ENSG00000187824.7ENST00000455996hsa-miR-3622a-3p10714834107148418mer-1a1071483410714855153-20.56
CAediting_1163785chr17_10714813_-ENSG00000187824.7ENST00000455996hsa-miR-3689a-3p10714812107148198mer-1a1071481210714834150-18.5
CAediting_1163785chr17_10714813_-ENSG00000187824.7ENST00000455996hsa-miR-3689b-3p10714812107148198mer-1a1071481210714834150-18.55
CAediting_1163785chr17_10714813_-ENSG00000187824.7ENST00000455996hsa-miR-3689c10714812107148198mer-1a1071481210714834150-18.55
CAediting_1163786chr17_10714826_-ENSG00000187824.7ENST00000455996hsa-miR-426610714826107148327mer-m81071482510714840140-14.01
CAediting_1163788chr17_10714860_-ENSG00000187824.7ENST00000455996hsa-miR-441810714858107148647mer-m81071485710714875149-14.72
CAediting_1163786chr17_10714826_-ENSG00000187824.7ENST00000455996hsa-miR-445810714821107148288mer-1a1071482110714839147-18.48
CAediting_1163793chr17_10714908_-ENSG00000187824.7ENST00000455996hsa-miR-448110714905107149117mer-m81071490410714921146-18.8
CAediting_1163786chr17_10714826_-ENSG00000187824.7ENST00000455996hsa-miR-450010714821107148288mer-1a1071482110714837151-15.74
CAediting_1163774chr17_10714706_-ENSG00000187824.7ENST00000455996hsa-miR-451810714705107147106mer1071470410714730142-21.64
CAediting_1163771chr17_10714688_-ENSG00000187824.7ENST00000455996hsa-miR-4520-3p10714688107146947mer-m81071468710714712147-19.6
CAediting_1163775chr17_10714726_-ENSG00000187824.7ENST00000455996hsa-miR-4638-3p10714725107147317mer-m81071472410714746148-22.17
CAediting_1163793chr17_10714908_-ENSG00000187824.7ENST00000455996hsa-miR-464810714907107149137mer-m81071490610714925150-18.77
CAediting_1163793chr17_10714908_-ENSG00000187824.7ENST00000455996hsa-miR-4745-5p10714905107149117mer-m81071490410714926151-21.13
CAediting_1163771chr17_10714688_-ENSG00000187824.7ENST00000455996hsa-miR-4761-5p10714683107146897mer-m81071468210714705154-17.09
CAediting_1163788chr17_10714860_-ENSG00000187824.7ENST00000455996hsa-miR-509-3-5p10714858107148647mer-m81071485710714879149-19.64
CAediting_1163788chr17_10714860_-ENSG00000187824.7ENST00000455996hsa-miR-509-5p10714858107148647mer-m81071485710714877147-14.95
CAediting_1163788chr17_10714860_-ENSG00000187824.7ENST00000455996hsa-miR-509-5p10714858107148647mer-m81071485710714877147-14.95
CAediting_1163774chr17_10714706_-ENSG00000187824.7ENST00000455996hsa-miR-510-5p10714704107147107mer-m81071470310714724146-17.29
CAediting_1163792chr17_10714896_-ENSG00000187824.7ENST00000455996hsa-miR-5189-5p10714895107149017mer-m81071489410714916151-22.35
CAediting_1163777chr17_10714750_-ENSG00000187824.7ENST00000455996hsa-miR-519a-2-5p10714749107147557mer-m81071474810714768153-18.5
CAediting_1163778chr17_10714752_-ENSG00000187824.7ENST00000455996hsa-miR-519a-2-5p10714749107147557mer-m81071474810714768153-18.5
CAediting_1163777chr17_10714750_-ENSG00000187824.7ENST00000455996hsa-miR-520b-5p10714749107147557mer-m81071474810714768153-18.5
CAediting_1163778chr17_10714752_-ENSG00000187824.7ENST00000455996hsa-miR-520b-5p10714749107147557mer-m81071474810714768153-18.5
CAediting_1163792chr17_10714896_-ENSG00000187824.7ENST00000455996hsa-miR-61210714895107149017mer-m81071489410714918142-20.14
CAediting_1163780chr17_10714796_-ENSG00000187824.7ENST00000455996hsa-miR-6500-3p10714793107147997mer-m81071479210714812143-12.24
CAediting_1163781chr17_10714797_-ENSG00000187824.7ENST00000455996hsa-miR-6500-3p10714793107147997mer-m81071479210714812143-12.24
CAediting_1163792chr17_10714896_-ENSG00000187824.7ENST00000455996hsa-miR-66110714893107148997mer-m81071489210714914147-16.74
CAediting_1163776chr17_10714746_-ENSG00000187824.7ENST00000455996hsa-miR-6747-3p10714744107147507mer-m81071474310714763141-18.46
CAediting_1163787chr17_10714839_-ENSG00000187824.7ENST00000455996hsa-miR-6751-3p10714838107148447mer-m81071483710714857146-18.07
CAediting_1163776chr17_10714746_-ENSG00000187824.7ENST00000455996hsa-miR-6752-3p10714743107147497mer-m81071474210714762150-16.26
CAediting_1163785chr17_10714813_-ENSG00000187824.7ENST00000455996hsa-miR-6779-5p10714812107148198mer-1a1071481210714830152-23.37
CAediting_1163785chr17_10714813_-ENSG00000187824.7ENST00000455996hsa-miR-6780a-5p10714812107148198mer-1a1071481210714835148-22.01
CAediting_1163792chr17_10714896_-ENSG00000187824.7ENST00000455996hsa-miR-686010714895107149017mer-m81071489410714914154-24.08
CAediting_1163771chr17_10714688_-ENSG00000187824.7ENST00000455996hsa-miR-807110714686107146927mer-m81071468510714703145-18.44
CAediting_1163771chr17_10714688_-ENSG00000187824.7ENST00000455996hsa-miR-807110714686107146927mer-m81071468510714703145-18.44
CAediting_1163784chr17_10714812_-ENSG00000187824.7ENST00000455996hsa-miR-887-5p10714812107148187mer-m81071481110714832144-19.38
CAediting_1163785chr17_10714813_-ENSG00000187824.7ENST00000455996hsa-miR-887-5p10714812107148187mer-m81071481110714832144-19.38
CAediting_1163792chr17_10714896_-ENSG00000187824.7ENST00000455996hsa-miR-939-3p10714894107149007mer-m81071489310714913140-15.63
CAediting_1163786chr17_10714826_-ENSG00000187824.7ENST00000455996hsa-miR-98-5p10714821107148288mer-1a1071482110714842148-15.8

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_1229414chr17_67471546_+ENSG00000187824.7ENST00000341871hsa-miR-548aa10714716107147227mer-m81071471510714739140-12.06
CAediting_1229415chr17_67471547_+ENSG00000187824.7ENST00000341871hsa-miR-548aa10713606107136127mer-m81071360510713629170-17.27
CAediting_117844chr1_162342605_+ENSG00000187824.7ENST00000341871hsa-miR-556-3p10714491107144977mer-m81071449010714511143-8.56
CAediting_228905chr2_188297554_+ENSG00000187824.7ENST00000341871hsa-miR-561-3p10713982107139887mer-m81071398110714000159-17.83
CAediting_580943chr7_100356700_+ENSG00000187824.7ENST00000341871hsa-miR-6840-3p10714844107148507mer-m81071484310714864143-24.62
CAediting_604450chr7_133034877_-ENSG00000187824.7ENST00000341871hsa-miR-365410714632107146387mer-m81071463110714649145-19.89
CAediting_1229414chr17_67471546_+ENSG00000187824.7ENST00000455996hsa-miR-548aa10714716107147227mer-m81071471510714739140-12.06
CAediting_580943chr7_100356700_+ENSG00000187824.7ENST00000455996hsa-miR-6840-3p10714844107148507mer-m81071484310714864143-24.62

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_414656chr5_72878640_+ENSG00000187824.7ENST00000341871hsa-miR-4804-3p10713384107133918mer-1a1071338410713404140-13.24
CAediting_117844chr1_162342605_+ENSG00000187824.7ENST00000341871hsa-miR-556-3p10714972107149787mer-m81071497110714996150-18.24

check button Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for TMEM220

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.

check button RNA A-to-I editing in RNA structures for Minimum free energy (MFE).
CAeditom_IDENSTEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI

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Relation with ADAR for TMEM220

check button Correlation between ADAR gene expression and RNA editing frequency
CancerCAeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)
PRADCAediting_1163895chr17_10728562_-0.002045060012610980.4180154348952980.008407697229153720.361767768651269..

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Relation with cancer stages for TMEM220

check button Correlation between Cancer stages and RNA editing frequency
CancerStage_typeCAeditomIDpositionP-valCoeff.

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Relation with survival for TMEM220

check button Correlation between RNA editing and survival
CancerCAeditomIDpositionKMpvalueCoxpvalueCoxHR

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RelatedDrugs for TMEM220

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for TMEM220

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease name# pubmedsSource