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Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with cancer stages

Soverview

Relation with survival state

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene

Editing gene: TPTEP1 (CAeditome ID:387590)

Gene summary for TPTEP1

check button Gene summary
Gene informationGene symbol

TPTEP1

Gene ID

387590

Gene nameTPTE pseudogene 1
SynonymspsiTPTE22
Cytomap

22q11.1

Type of genepseudo
Descriptionendogenous retroviral protease pseudogenetransmembrane phosphatase with tensin homology pseudogene 1
Modification date20210518
UniProtAcc

.

Context

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID

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RNA A-to-I events for TPTEP1

check buttonRNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.
all structure

check button RNA editing frequencies across 33 cancers of gene: ENSG00000100181.20
boxplot

check button RNA A-to-I editing events in Cancer.
CAediting_1457470(16604724, +), CAediting_1457471(16604740, +), CAediting_1457472(16604792, +), CAediting_1457473(16604802, +), CAediting_1457474(16604804, +), CAediting_1457475(16604812, +), CAediting_1457476(16604864, +), CAediting_1457477(16604902, +), CAediting_1457478(16604932, +), CAediting_1457479(16606288, +), CAediting_1457480(16606295, +), CAediting_1457481(16606333, +), CAediting_1457482(16606384, +), CAediting_1457483(16606409, +), CAediting_1457484(16607092, +), CAediting_1457485(16607309, +), CAediting_1457486(16607792, +), CAediting_1457487(16607793, +), CAediting_1457488(16607797, +), CAediting_1457489(16607859, +), CAediting_1457490(16607873, +), CAediting_1457491(16607876, +), CAediting_1457492(16607955, +), CAediting_1457493(16607956, +), CAediting_1457494(16607968, +), CAediting_1457495(16608140, +), CAediting_1457496(16608275, +), CAediting_1457497(16608282, +), CAediting_1457498(16608341, +), CAediting_1457499(16615021, +), CAediting_1457500(16638865, +), CAediting_1457501(16638883, +), CAediting_1457502(16638894, +), CAediting_1457503(16638920, +), CAediting_1457504(16638976, +), CAediting_1457505(16638996, +), CAediting_1457506(16648562, +), CAediting_1457507(16648567, +), CAediting_1457508(16648569, +), CAediting_1457509(16648570, +), CAediting_1457510(16648580, +), CAediting_1457511(16648586, +), CAediting_1457512(16648606, +), CAediting_1457513(16648609, +), CAediting_1457514(16648623, +), CAediting_1457515(16648632, +), CAediting_1457516(16648635, +), CAediting_1457517(16648645, +), CAediting_1457518(16648647, +), CAediting_1457519(16648655, +), CAediting_1457520(16648671, +), CAediting_1457521(16648672, +), CAediting_1457522(16648680, +), CAediting_1457523(16648686, +), CAediting_1457524(16648689, +), CAediting_1457525(16648703, +), CAediting_1457526(16648706, +), CAediting_1457527(16648708, +), CAediting_1457528(16648715, +), CAediting_1457529(16648727, +), CAediting_1457530(16648735, +), CAediting_1457531(16648736, +), CAediting_1457532(16648740, +), CAediting_1457533(16648741, +), CAediting_1457534(16648745, +), CAediting_1457535(16648749, +), CAediting_1457536(16648767, +), CAediting_1457537(16648768, +), CAediting_1457538(16648775, +), CAediting_1457539(16648780, +), CAediting_1457540(16648782, +), CAediting_1457541(16648802, +), CAediting_1457542(16653086, +), CAediting_1457543(16653088, +), CAediting_1457544(16653109, +), CAediting_1457545(16653116, +), CAediting_1457546(16653117, +), CAediting_1457547(16653125, +), CAediting_1457548(16653143, +), CAediting_1457549(16653148, +), CAediting_1457550(16653152, +), CAediting_1457551(16653156, +), CAediting_1457552(16653157, +), CAediting_1457553(16653162, +), CAediting_1457554(16653167, +), CAediting_1457555(16653171, +), CAediting_1457556(16653176, +), CAediting_1457557(16653179, +), CAediting_1457558(16653180, +), CAediting_1457559(16653187, +), CAediting_1457560(16653193, +), CAediting_1457561(16653195, +), CAediting_1457562(16653196, +), CAediting_1457563(16653197, +), CAediting_1457564(16653198, +), CAediting_1457565(16653199, +), CAediting_1457566(16653211, +), CAediting_1457567(16653212, +), CAediting_1457568(16653215, +), CAediting_1457569(16653231, +), CAediting_1457570(16653241, +), CAediting_1457571(16653251, +), CAediting_1457572(16653254, +), CAediting_1457573(16653260, +), CAediting_1457574(16653270, +), CAediting_1457575(16653283, +), CAediting_1457576(16653307, +), CAediting_1457577(16653358, +), CAediting_1457578(16653359, +), CAediting_1457579(16653387, +), CAediting_1457580(16653395, +), CAediting_1457581(16653396, +), CAediting_1457582(16653401, +), CAediting_1457583(16653404, +), CAediting_1457584(16653405, +), CAediting_1457585(16653412, +), CAediting_1457586(16653422, +), CAediting_1457587(16653431, +), CAediting_1457588(16653436, +), CAediting_1457589(16653441, +), CAediting_1457590(16653452, +), CAediting_1457591(16653455, +), CAediting_1457592(16653465, +), CAediting_1457593(16653473, +), CAediting_1457594(16653474, +), CAediting_1457595(16653475, +), CAediting_1457596(16653486, +), CAediting_1457597(16653489, +), CAediting_1457598(16653490, +), CAediting_1457599(16653491, +), CAediting_1457600(16653492, +), CAediting_1457601(16653493, +), CAediting_1457602(16653495, +), CAediting_1457603(16653498, +), CAediting_1457604(16653499, +), CAediting_1457605(16653500, +), CAediting_1457606(16653501, +), CAediting_1457607(16653505, +), CAediting_1457608(16653508, +), CAediting_1457609(16653521, +), CAediting_1457610(16653523, +), CAediting_1457611(16653525, +), CAediting_1457612(16653531, +), CAediting_1457613(16653532, +), CAediting_1457614(16653537, +), CAediting_1457615(16653541, +), CAediting_1457616(16653548, +), CAediting_1457617(16653554, +), CAediting_1457618(16653558, +), CAediting_1457619(16653561, +), CAediting_1457620(16653573, +), CAediting_1457621(16653577, +), CAediting_1457622(16653580, +), CAediting_1457623(16653584, +), CAediting_1457624(16653593, +), CAediting_1457625(16653597, +), CAediting_1457626(16653602, +), CAediting_1457627(16653607, +), CAediting_1457628(16653631, +), CAediting_1457629(16653635, +), CAediting_1457630(16653642, +),

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RNA editing positional annotations for TPTEP1 using Annovar

check button Protein coding RNA editing(s).
CAeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred

check button Gene structure information of RNA editing(s).
CAeditome IDPositionVariant type
CAediting_1457470chr22_16604724_+ncRNA_intronic
CAediting_1457471chr22_16604740_+ncRNA_intronic
CAediting_1457472chr22_16604792_+ncRNA_intronic
CAediting_1457473chr22_16604802_+ncRNA_intronic
CAediting_1457474chr22_16604804_+ncRNA_intronic
CAediting_1457475chr22_16604812_+ncRNA_intronic
CAediting_1457476chr22_16604864_+ncRNA_intronic
CAediting_1457477chr22_16604902_+ncRNA_intronic
CAediting_1457478chr22_16604932_+ncRNA_intronic
CAediting_1457479chr22_16606288_+ncRNA_intronic
CAediting_1457480chr22_16606295_+ncRNA_intronic
CAediting_1457481chr22_16606333_+ncRNA_intronic
CAediting_1457482chr22_16606384_+ncRNA_intronic
CAediting_1457483chr22_16606409_+ncRNA_intronic
CAediting_1457484chr22_16607092_+ncRNA_intronic
CAediting_1457485chr22_16607309_+ncRNA_intronic
CAediting_1457486chr22_16607792_+ncRNA_intronic
CAediting_1457487chr22_16607793_+ncRNA_intronic
CAediting_1457488chr22_16607797_+ncRNA_intronic
CAediting_1457489chr22_16607859_+ncRNA_intronic
CAediting_1457490chr22_16607873_+ncRNA_intronic
CAediting_1457491chr22_16607876_+ncRNA_intronic
CAediting_1457492chr22_16607955_+ncRNA_intronic
CAediting_1457493chr22_16607956_+ncRNA_intronic
CAediting_1457494chr22_16607968_+ncRNA_intronic
CAediting_1457495chr22_16608140_+ncRNA_intronic
CAediting_1457496chr22_16608275_+ncRNA_intronic
CAediting_1457497chr22_16608282_+ncRNA_intronic
CAediting_1457498chr22_16608341_+ncRNA_intronic
CAediting_1457499chr22_16615021_+ncRNA_exonic
CAediting_1457500chr22_16638865_+ncRNA_exonic
CAediting_1457501chr22_16638883_+ncRNA_exonic
CAediting_1457502chr22_16638894_+ncRNA_exonic
CAediting_1457503chr22_16638920_+ncRNA_exonic
CAediting_1457504chr22_16638976_+ncRNA_exonic
CAediting_1457505chr22_16638996_+ncRNA_intronic
CAediting_1457506chr22_16648562_+ncRNA_exonic
CAediting_1457507chr22_16648567_+ncRNA_exonic
CAediting_1457508chr22_16648569_+ncRNA_exonic
CAediting_1457509chr22_16648570_+ncRNA_exonic
CAediting_1457510chr22_16648580_+ncRNA_exonic
CAediting_1457511chr22_16648586_+ncRNA_exonic
CAediting_1457512chr22_16648606_+ncRNA_exonic
CAediting_1457513chr22_16648609_+ncRNA_exonic
CAediting_1457514chr22_16648623_+ncRNA_exonic
CAediting_1457515chr22_16648632_+ncRNA_exonic
CAediting_1457516chr22_16648635_+ncRNA_exonic
CAediting_1457517chr22_16648645_+ncRNA_exonic
CAediting_1457518chr22_16648647_+ncRNA_exonic
CAediting_1457519chr22_16648655_+ncRNA_exonic
CAediting_1457520chr22_16648671_+ncRNA_exonic
CAediting_1457521chr22_16648672_+ncRNA_exonic
CAediting_1457522chr22_16648680_+ncRNA_exonic
CAediting_1457523chr22_16648686_+ncRNA_exonic
CAediting_1457524chr22_16648689_+ncRNA_exonic
CAediting_1457525chr22_16648703_+ncRNA_exonic
CAediting_1457526chr22_16648706_+ncRNA_exonic
CAediting_1457527chr22_16648708_+ncRNA_exonic
CAediting_1457528chr22_16648715_+ncRNA_exonic
CAediting_1457529chr22_16648727_+ncRNA_exonic
CAediting_1457530chr22_16648735_+ncRNA_exonic
CAediting_1457531chr22_16648736_+ncRNA_exonic
CAediting_1457532chr22_16648740_+ncRNA_exonic
CAediting_1457533chr22_16648741_+ncRNA_exonic
CAediting_1457534chr22_16648745_+ncRNA_exonic
CAediting_1457535chr22_16648749_+ncRNA_exonic
CAediting_1457536chr22_16648767_+ncRNA_exonic
CAediting_1457537chr22_16648768_+ncRNA_exonic
CAediting_1457538chr22_16648775_+ncRNA_exonic
CAediting_1457539chr22_16648780_+ncRNA_exonic
CAediting_1457540chr22_16648782_+ncRNA_exonic
CAediting_1457541chr22_16648802_+ncRNA_exonic
CAediting_1457542chr22_16653086_+ncRNA_exonic
CAediting_1457543chr22_16653088_+ncRNA_exonic
CAediting_1457544chr22_16653109_+ncRNA_exonic
CAediting_1457545chr22_16653116_+ncRNA_exonic
CAediting_1457546chr22_16653117_+ncRNA_exonic
CAediting_1457547chr22_16653125_+ncRNA_exonic
CAediting_1457548chr22_16653143_+ncRNA_exonic
CAediting_1457549chr22_16653148_+ncRNA_exonic
CAediting_1457550chr22_16653152_+ncRNA_exonic
CAediting_1457551chr22_16653156_+ncRNA_exonic
CAediting_1457552chr22_16653157_+ncRNA_exonic
CAediting_1457553chr22_16653162_+ncRNA_exonic
CAediting_1457554chr22_16653167_+ncRNA_exonic
CAediting_1457555chr22_16653171_+ncRNA_exonic
CAediting_1457556chr22_16653176_+ncRNA_exonic
CAediting_1457557chr22_16653179_+ncRNA_exonic
CAediting_1457558chr22_16653180_+ncRNA_exonic
CAediting_1457559chr22_16653187_+ncRNA_exonic
CAediting_1457560chr22_16653193_+ncRNA_exonic
CAediting_1457561chr22_16653195_+ncRNA_exonic
CAediting_1457562chr22_16653196_+ncRNA_exonic
CAediting_1457563chr22_16653197_+ncRNA_exonic
CAediting_1457564chr22_16653198_+ncRNA_exonic
CAediting_1457565chr22_16653199_+ncRNA_exonic
CAediting_1457566chr22_16653211_+ncRNA_exonic
CAediting_1457567chr22_16653212_+ncRNA_exonic
CAediting_1457568chr22_16653215_+ncRNA_exonic
CAediting_1457569chr22_16653231_+ncRNA_exonic
CAediting_1457570chr22_16653241_+ncRNA_exonic
CAediting_1457571chr22_16653251_+ncRNA_exonic
CAediting_1457572chr22_16653254_+ncRNA_exonic
CAediting_1457573chr22_16653260_+ncRNA_exonic
CAediting_1457574chr22_16653270_+ncRNA_exonic
CAediting_1457575chr22_16653283_+ncRNA_exonic
CAediting_1457576chr22_16653307_+ncRNA_exonic
CAediting_1457577chr22_16653358_+ncRNA_exonic
CAediting_1457578chr22_16653359_+ncRNA_exonic
CAediting_1457579chr22_16653387_+ncRNA_exonic
CAediting_1457580chr22_16653395_+ncRNA_exonic
CAediting_1457581chr22_16653396_+ncRNA_exonic
CAediting_1457582chr22_16653401_+ncRNA_exonic
CAediting_1457583chr22_16653404_+ncRNA_exonic
CAediting_1457584chr22_16653405_+ncRNA_exonic
CAediting_1457585chr22_16653412_+ncRNA_exonic
CAediting_1457586chr22_16653422_+ncRNA_exonic
CAediting_1457587chr22_16653431_+ncRNA_exonic
CAediting_1457588chr22_16653436_+ncRNA_exonic
CAediting_1457589chr22_16653441_+ncRNA_exonic
CAediting_1457590chr22_16653452_+ncRNA_exonic
CAediting_1457591chr22_16653455_+ncRNA_exonic
CAediting_1457592chr22_16653465_+ncRNA_exonic
CAediting_1457593chr22_16653473_+ncRNA_exonic
CAediting_1457594chr22_16653474_+ncRNA_exonic
CAediting_1457595chr22_16653475_+ncRNA_exonic
CAediting_1457596chr22_16653486_+ncRNA_exonic
CAediting_1457597chr22_16653489_+ncRNA_exonic
CAediting_1457598chr22_16653490_+ncRNA_exonic
CAediting_1457599chr22_16653491_+ncRNA_exonic
CAediting_1457600chr22_16653492_+ncRNA_exonic
CAediting_1457601chr22_16653493_+ncRNA_exonic
CAediting_1457602chr22_16653495_+ncRNA_exonic
CAediting_1457603chr22_16653498_+ncRNA_exonic
CAediting_1457604chr22_16653499_+ncRNA_exonic
CAediting_1457605chr22_16653500_+ncRNA_exonic
CAediting_1457606chr22_16653501_+ncRNA_exonic
CAediting_1457607chr22_16653505_+ncRNA_exonic
CAediting_1457608chr22_16653508_+ncRNA_exonic;splicing
CAediting_1457609chr22_16653521_+ncRNA_exonic
CAediting_1457610chr22_16653523_+ncRNA_exonic
CAediting_1457611chr22_16653525_+ncRNA_exonic
CAediting_1457612chr22_16653531_+ncRNA_exonic
CAediting_1457613chr22_16653532_+ncRNA_exonic
CAediting_1457614chr22_16653537_+ncRNA_exonic
CAediting_1457615chr22_16653541_+ncRNA_exonic
CAediting_1457616chr22_16653548_+ncRNA_exonic
CAediting_1457617chr22_16653554_+ncRNA_exonic
CAediting_1457618chr22_16653558_+ncRNA_exonic
CAediting_1457619chr22_16653561_+ncRNA_exonic
CAediting_1457620chr22_16653573_+ncRNA_exonic
CAediting_1457621chr22_16653577_+ncRNA_exonic
CAediting_1457622chr22_16653580_+ncRNA_exonic
CAediting_1457623chr22_16653584_+ncRNA_exonic
CAediting_1457624chr22_16653593_+ncRNA_exonic
CAediting_1457625chr22_16653597_+ncRNA_exonic
CAediting_1457626chr22_16653602_+ncRNA_exonic
CAediting_1457627chr22_16653607_+ncRNA_exonic
CAediting_1457628chr22_16653631_+ncRNA_exonic
CAediting_1457629chr22_16653635_+ncRNA_exonic
CAediting_1457630chr22_16653642_+ncRNA_exonic

check button Repat-regional RNA editing(s).
CAeditome IDPositionRepeat familyRepeat sub familyRepeat name
CAediting_1457470chr22_16604724_+SINEAluAluSx
CAediting_1457471chr22_16604740_+SINEAluAluSx
CAediting_1457472chr22_16604792_+SINEAluAluSx
CAediting_1457473chr22_16604802_+SINEAluAluSx
CAediting_1457474chr22_16604804_+SINEAluAluSx
CAediting_1457475chr22_16604812_+SINEAluAluSx
CAediting_1457476chr22_16604864_+SINEAluAluSx
CAediting_1457477chr22_16604902_+SINEAluAluSx
CAediting_1457478chr22_16604932_+SINEAluAluSx
CAediting_1457479chr22_16606288_+SINEAluAluSc8
CAediting_1457480chr22_16606295_+SINEAluAluSc8
CAediting_1457481chr22_16606333_+SINEAluAluSc8
CAediting_1457482chr22_16606384_+SINEAluAluSc8
CAediting_1457483chr22_16606409_+SINEAluAluSc8
CAediting_1457484chr22_16607092_+SINEAluAluJb
CAediting_1457485chr22_16607309_+SINEAluAluJb
CAediting_1457486chr22_16607792_+SINEAluAluSx
CAediting_1457487chr22_16607793_+SINEAluAluSx
CAediting_1457488chr22_16607797_+SINEAluAluSx
CAediting_1457489chr22_16607859_+SINEAluAluSx
CAediting_1457490chr22_16607873_+SINEAluAluSx
CAediting_1457491chr22_16607876_+SINEAluAluSx
CAediting_1457492chr22_16607955_+SINEAluAluSx
CAediting_1457493chr22_16607956_+SINEAluAluSx
CAediting_1457494chr22_16607968_+SINEAluAluSx
CAediting_1457495chr22_16608140_+SINEAluAluSx4
CAediting_1457496chr22_16608275_+SINEAluAluSx4
CAediting_1457497chr22_16608282_+SINEAluAluSx4
CAediting_1457498chr22_16608341_+SINEAluAluSx4
CAediting_1457499chr22_16615021_+LTRERV1LTR7Y
CAediting_1457500chr22_16638865_+SINEAluAluSg
CAediting_1457501chr22_16638883_+SINEAluAluSg
CAediting_1457502chr22_16638894_+SINEAluAluSg
CAediting_1457503chr22_16638920_+SINEAluAluSg
CAediting_1457504chr22_16638976_+SINEAluAluSg
CAediting_1457505chr22_16638996_+SINEAluAluSg
CAediting_1457506chr22_16648562_+SINEAluAluSz
CAediting_1457507chr22_16648567_+SINEAluAluSz
CAediting_1457508chr22_16648569_+SINEAluAluSz
CAediting_1457509chr22_16648570_+SINEAluAluSz
CAediting_1457510chr22_16648580_+SINEAluAluSz
CAediting_1457511chr22_16648586_+SINEAluAluSz
CAediting_1457512chr22_16648606_+SINEAluAluSz
CAediting_1457513chr22_16648609_+SINEAluAluSz
CAediting_1457514chr22_16648623_+SINEAluAluSz
CAediting_1457515chr22_16648632_+SINEAluAluSz
CAediting_1457516chr22_16648635_+SINEAluAluSz
CAediting_1457517chr22_16648645_+SINEAluAluSz
CAediting_1457518chr22_16648647_+SINEAluAluSz
CAediting_1457519chr22_16648655_+SINEAluAluSz
CAediting_1457520chr22_16648671_+SINEAluAluSz
CAediting_1457521chr22_16648672_+SINEAluAluSz
CAediting_1457522chr22_16648680_+SINEAluAluSz
CAediting_1457523chr22_16648686_+SINEAluAluSz
CAediting_1457524chr22_16648689_+SINEAluAluSz
CAediting_1457525chr22_16648703_+SINEAluAluSz
CAediting_1457526chr22_16648706_+SINEAluAluSz
CAediting_1457527chr22_16648708_+SINEAluAluSz
CAediting_1457528chr22_16648715_+SINEAluAluSz
CAediting_1457529chr22_16648727_+SINEAluAluSz
CAediting_1457530chr22_16648735_+SINEAluAluSz
CAediting_1457531chr22_16648736_+SINEAluAluSz
CAediting_1457532chr22_16648740_+SINEAluAluSz
CAediting_1457533chr22_16648741_+SINEAluAluSz
CAediting_1457534chr22_16648745_+SINEAluAluSz
CAediting_1457535chr22_16648749_+SINEAluAluSz
CAediting_1457536chr22_16648767_+SINEAluAluSz
CAediting_1457537chr22_16648768_+SINEAluAluSz
CAediting_1457538chr22_16648775_+SINEAluAluSz
CAediting_1457539chr22_16648780_+SINEAluAluSz
CAediting_1457540chr22_16648782_+SINEAluAluSz
CAediting_1457541chr22_16648802_+SINEAluAluSz
CAediting_1457542chr22_16653086_+SINEAluAluJr
CAediting_1457543chr22_16653088_+SINEAluAluJr
CAediting_1457544chr22_16653109_+SINEAluAluJr
CAediting_1457545chr22_16653116_+SINEAluAluJr
CAediting_1457546chr22_16653117_+SINEAluAluJr
CAediting_1457547chr22_16653125_+SINEAluAluJr
CAediting_1457548chr22_16653143_+SINEAluAluJr
CAediting_1457549chr22_16653148_+SINEAluAluJr
CAediting_1457550chr22_16653152_+SINEAluAluJr
CAediting_1457551chr22_16653156_+SINEAluAluJr
CAediting_1457552chr22_16653157_+SINEAluAluJr
CAediting_1457553chr22_16653162_+SINEAluAluJr
CAediting_1457554chr22_16653167_+SINEAluAluJr
CAediting_1457555chr22_16653171_+SINEAluAluJr
CAediting_1457556chr22_16653176_+SINEAluAluJr
CAediting_1457557chr22_16653179_+SINEAluAluJr
CAediting_1457558chr22_16653180_+SINEAluAluJr
CAediting_1457559chr22_16653187_+SINEAluAluJr
CAediting_1457560chr22_16653193_+SINEAluAluJr
CAediting_1457561chr22_16653195_+SINEAluAluJr
CAediting_1457562chr22_16653196_+SINEAluAluJr
CAediting_1457563chr22_16653197_+SINEAluAluJr
CAediting_1457564chr22_16653198_+SINEAluAluJr
CAediting_1457565chr22_16653199_+SINEAluAluJr
CAediting_1457566chr22_16653211_+SINEAluAluJr
CAediting_1457567chr22_16653212_+SINEAluAluJr
CAediting_1457568chr22_16653215_+SINEAluAluJr
CAediting_1457569chr22_16653231_+SINEAluAluJr
CAediting_1457570chr22_16653241_+SINEAluAluJr
CAediting_1457571chr22_16653251_+SINEAluAluJr
CAediting_1457572chr22_16653254_+SINEAluAluJr
CAediting_1457573chr22_16653260_+SINEAluAluJr
CAediting_1457574chr22_16653270_+SINEAluAluJr
CAediting_1457575chr22_16653283_+SINEAluAluJr
CAediting_1457576chr22_16653307_+SINEAluAluJr
CAediting_1457577chr22_16653358_+SINEAluAluJr
CAediting_1457578chr22_16653359_+SINEAluAluJr
CAediting_1457579chr22_16653387_+SINEAluAluSq2
CAediting_1457580chr22_16653395_+SINEAluAluSq2
CAediting_1457581chr22_16653396_+SINEAluAluSq2
CAediting_1457582chr22_16653401_+SINEAluAluSq2
CAediting_1457583chr22_16653404_+SINEAluAluSq2
CAediting_1457584chr22_16653405_+SINEAluAluSq2
CAediting_1457585chr22_16653412_+SINEAluAluSq2
CAediting_1457586chr22_16653422_+SINEAluAluSq2
CAediting_1457587chr22_16653431_+SINEAluAluSq2
CAediting_1457588chr22_16653436_+SINEAluAluSq2
CAediting_1457589chr22_16653441_+SINEAluAluSq2
CAediting_1457590chr22_16653452_+SINEAluAluSq2
CAediting_1457591chr22_16653455_+SINEAluAluSq2
CAediting_1457592chr22_16653465_+SINEAluAluSq2
CAediting_1457593chr22_16653473_+SINEAluAluSq2
CAediting_1457594chr22_16653474_+SINEAluAluSq2
CAediting_1457595chr22_16653475_+SINEAluAluSq2
CAediting_1457596chr22_16653486_+SINEAluAluSq2
CAediting_1457597chr22_16653489_+SINEAluAluSq2
CAediting_1457598chr22_16653490_+SINEAluAluSq2
CAediting_1457599chr22_16653491_+SINEAluAluSq2
CAediting_1457600chr22_16653492_+SINEAluAluSq2
CAediting_1457601chr22_16653493_+SINEAluAluSq2
CAediting_1457602chr22_16653495_+SINEAluAluSq2
CAediting_1457603chr22_16653498_+SINEAluAluSq2
CAediting_1457604chr22_16653499_+SINEAluAluSq2
CAediting_1457605chr22_16653500_+SINEAluAluSq2
CAediting_1457606chr22_16653501_+SINEAluAluSq2
CAediting_1457607chr22_16653505_+SINEAluAluSq2
CAediting_1457608chr22_16653508_+SINEAluAluSq2
CAediting_1457609chr22_16653521_+SINEAluAluSq2
CAediting_1457610chr22_16653523_+SINEAluAluSq2
CAediting_1457611chr22_16653525_+SINEAluAluSq2
CAediting_1457612chr22_16653531_+SINEAluAluSq2
CAediting_1457613chr22_16653532_+SINEAluAluSq2
CAediting_1457614chr22_16653537_+SINEAluAluSq2
CAediting_1457615chr22_16653541_+SINEAluAluSq2
CAediting_1457616chr22_16653548_+SINEAluAluSq2
CAediting_1457617chr22_16653554_+SINEAluAluSq2
CAediting_1457618chr22_16653558_+SINEAluAluSq2
CAediting_1457619chr22_16653561_+SINEAluAluSq2
CAediting_1457620chr22_16653573_+SINEAluAluSq2
CAediting_1457621chr22_16653577_+SINEAluAluSq2
CAediting_1457622chr22_16653580_+SINEAluAluSq2
CAediting_1457623chr22_16653584_+SINEAluAluSq2
CAediting_1457624chr22_16653593_+SINEAluAluSq2
CAediting_1457625chr22_16653597_+SINEAluAluSq2
CAediting_1457626chr22_16653602_+SINEAluAluSq2
CAediting_1457627chr22_16653607_+SINEAluAluSq2
CAediting_1457628chr22_16653631_+SINEAluAluSq2
CAediting_1457629chr22_16653635_+SINEAluAluSq2
CAediting_1457630chr22_16653642_+SINEAluAluSq2

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RNA A-to-I editing events in the alternative splicing sites for TPTEP1

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeCAeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength

check button Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000100181.20.TPTEP1.

check button Correlation between RNA A-to-I editing and PSI for ENSG00000100181.20.TPTEP1.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for TPTEP1

check button Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.
boxplot

check button Correlation between RNA A-to-I editing and gene expression.
boxplot

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for TPTEP1

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.


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The effects of the RNA editing to the miRNA binding sites for TPTEP1

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_1457499chr22_16615021_+ENSG00000100181.20ENST00000588548.1hsa-miR-128-1-5p16615020166150278mer-1a1661500516615027145-18.26
CAediting_1457499chr22_16615021_+ENSG00000100181.20ENST00000588548.1hsa-miR-128-2-5p16615020166150278mer-1a1661500816615027145-18.65
CAediting_1457499chr22_16615021_+ENSG00000100181.20ENST00000592107.4hsa-miR-128-1-5p16615020166150278mer-1a1661500516615027145-18.26
CAediting_1457499chr22_16615021_+ENSG00000100181.20ENST00000592107.4hsa-miR-128-2-5p16615020166150278mer-1a1661500816615027145-18.65
CAediting_1457499chr22_16615021_+ENSG00000100181.20ENST00000592918.4hsa-miR-128-1-5p16615020166150278mer-1a1661500516615027145-18.26
CAediting_1457499chr22_16615021_+ENSG00000100181.20ENST00000592918.4hsa-miR-128-2-5p16615020166150278mer-1a1661500816615027145-18.65

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_1457499chr22_16615021_+ENSG00000100181.20ENST00000588548.1hsa-miR-185-3p16615020166150278mer-1a1661500616615027144-15.84
CAediting_1457499chr22_16615021_+ENSG00000100181.20ENST00000588548.1hsa-miR-467516615019166150257mer-m81661500516615026140-18.33
CAediting_1457499chr22_16615021_+ENSG00000100181.20ENST00000588548.1hsa-miR-4687-3p16615018166150247mer-m81661500516615025148-17.67
CAediting_1457499chr22_16615021_+ENSG00000100181.20ENST00000588548.1hsa-miR-474116615019166150257mer-m81661500316615026148-20.45
CAediting_1457499chr22_16615021_+ENSG00000100181.20ENST00000592918.4hsa-miR-185-3p16615020166150278mer-1a1661500616615027144-15.84
CAediting_1457499chr22_16615021_+ENSG00000100181.20ENST00000592918.4hsa-miR-467516615019166150257mer-m81661500516615026140-18.33
CAediting_1457499chr22_16615021_+ENSG00000100181.20ENST00000592918.4hsa-miR-4687-3p16615018166150247mer-m81661500516615025148-17.67
CAediting_1457499chr22_16615021_+ENSG00000100181.20ENST00000592918.4hsa-miR-474116615019166150257mer-m81661500316615026148-20.45
CAediting_1457499chr22_16615021_+ENSG00000100181.20ENST00000592107.4hsa-miR-185-3p16615020166150278mer-1a1661500616615027144-15.84
CAediting_1457499chr22_16615021_+ENSG00000100181.20ENST00000592107.4hsa-miR-467516615019166150257mer-m81661500516615026140-18.33
CAediting_1457499chr22_16615021_+ENSG00000100181.20ENST00000592107.4hsa-miR-4687-3p16615018166150247mer-m81661500516615025148-17.67
CAediting_1457499chr22_16615021_+ENSG00000100181.20ENST00000592107.4hsa-miR-474116615019166150257mer-m81661500316615026148-20.45

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_1229413chr17_67471544_+ENSG00000100181.20ENST00000588548.1hsa-miR-548aa16613448166134547mer-m81661343316613455150-13.57
CAediting_1351755chr19_40282625_-ENSG00000100181.20ENST00000588548.1hsa-miR-64116612664166126707mer-m81661265016612671147-14.29
CAediting_1368054chr19_46709310_-ENSG00000100181.20ENST00000588548.1hsa-miR-320e16614008166140147mer-m81661399816614015148-17.58
CAediting_86358chr1_109598906_+ENSG00000100181.20ENST00000588548.1hsa-miR-197-5p16614949166149557mer-m81661493416614956142-16.4
CAediting_86358chr1_109598906_+ENSG00000100181.20ENST00000588548.1hsa-miR-197-5p16612992166129987mer-m81661297416612999158-29.6
CAediting_1399425chr20_1392958_-ENSG00000100181.20ENST00000588548.1hsa-miR-6869-5p16614212166142187mer-m81661419916614219146-24.01
CAediting_573000chr7_92204081_-ENSG00000100181.20ENST00000588548.1hsa-miR-1285-5p16613437166134437mer-m81661342416613444159-21.37
CAediting_573001chr7_92204086_-ENSG00000100181.20ENST00000588548.1hsa-miR-1285-5p16613805166138128mer-1a1661379216613812140-17.62
CAediting_1306323chr19_13836462_-ENSG00000100181.20ENST00000592918.4hsa-miR-27a-3p16611755166117606mer1661174116611761146-16.52
CAediting_86358chr1_109598906_+ENSG00000100181.20ENST00000592918.4hsa-miR-197-5p16614949166149557mer-m81661493416614956142-16.4
CAediting_1399425chr20_1392958_-ENSG00000100181.20ENST00000592918.4hsa-miR-6869-5p16614212166142187mer-m81661419916614219146-24.01
CAediting_580943chr7_100356700_+ENSG00000100181.20ENST00000592918.4hsa-miR-6840-3p16601935166019417mer-m81660192116601942147-26.08
CAediting_1306323chr19_13836462_-ENSG00000100181.20ENST00000592107.4hsa-miR-27a-3p16611755166117606mer1661174116611761146-16.52
CAediting_86358chr1_109598906_+ENSG00000100181.20ENST00000592107.4hsa-miR-197-5p16614949166149557mer-m81661493416614956142-16.4
CAediting_1306323chr19_13836462_-ENSG00000100181.20ENST00000591299.1hsa-miR-27a-3p16611755166117606mer1661174116611761146-16.52
CAediting_1368054chr19_46709310_-ENSG00000100181.20ENST00000591299.1hsa-miR-320e16614008166140147mer-m81661399816614015148-17.58
CAediting_1399425chr20_1392958_-ENSG00000100181.20ENST00000591299.1hsa-miR-6869-5p16614212166142187mer-m81661419916614219146-24.01
CAediting_468389chr6_31355314_-ENSG00000100181.20ENST00000588548.1hsa-miR-6891-5p16612927166129337mer-m81661291616612934158-26.06
CAediting_468389chr6_31355314_-ENSG00000100181.20ENST00000588548.1hsa-miR-6891-5p16613020166130278mer-1a1661300816613027158-27.61
CAediting_1524209chrX_134546392_-ENSG00000100181.20ENST00000588548.1hsa-miR-503-5p16614106166141127mer-m81661409216614113146-22.61
CAediting_1524209chrX_134546392_-ENSG00000100181.20ENST00000592918.4hsa-miR-503-5p16614106166141127mer-m81661409216614113146-22.61
CAediting_1524209chrX_134546392_-ENSG00000100181.20ENST00000592107.4hsa-miR-503-5p16614106166141127mer-m81661409216614113146-22.61
CAediting_1524209chrX_134546392_-ENSG00000100181.20ENST00000591299.1hsa-miR-503-5p16614106166141127mer-m81661409216614113146-22.61

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_573000chr7_92204081_-ENSG00000100181.20ENST00000588548.1hsa-miR-1285-5p16614943166149497mer-m81661493016614950141-13.6
CAediting_573001chr7_92204086_-ENSG00000100181.20ENST00000588548.1hsa-miR-1285-5p16614943166149497mer-m81661493016614950141-13.6
CAediting_396018chr5_1062918_-ENSG00000100181.20ENST00000588548.1hsa-miR-463516613729166137357mer-m81661371616613736148-12.5
CAediting_748296chr10_51299626_+ENSG00000100181.20ENST00000588548.1hsa-miR-605-3p16613726166137338mer-1a1661371316613733146-10.89
CAediting_748296chr10_51299626_+ENSG00000100181.20ENST00000588548.1hsa-miR-605-3p16614227166142337mer-m81661421416614234148-15.44
CAediting_468389chr6_31355314_-ENSG00000100181.20ENST00000588548.1hsa-miR-6891-5p16614481166144877mer-m81661446716614488144-23.48
CAediting_1524209chrX_134546392_-ENSG00000100181.20ENST00000592918.4hsa-miR-503-5p16601927166019326mer1660191116601933143-20.15
CAediting_748296chr10_51299626_+ENSG00000100181.20ENST00000592918.4hsa-miR-605-3p16614227166142337mer-m81661421416614234148-15.44

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for TPTEP1

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.

check button RNA A-to-I editing in RNA structures for Minimum free energy (MFE).
CAeditom_IDENSTEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI

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Relation with ADAR for TPTEP1

check button Correlation between ADAR gene expression and RNA editing frequency
CancerCAeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)
LUADCAediting_1457514chr22_16648623_+....0.03602423949641260.252908585487525
LUSCCAediting_1457514chr22_16648623_+..0.02628184340344770.302338130799631..
THCACAediting_1457514chr22_16648623_+1.60184140973131e-050.220478022869373....
KIRPCAediting_1457514chr22_16648623_+4.05900247317487e-050.418434114592227....
THYMCAediting_1457514chr22_16648623_+0.01489097896424910.289978728900181....
LUADCAediting_1457516chr22_16648635_+..0.0291313244554660.297104750468708..
THYMCAediting_1457516chr22_16648635_+0.01388126000039170.301521302846875....
THCACAediting_1457533chr22_16648741_+0.004786418853766740.154710492931543....
SARCCAediting_1457533chr22_16648741_+....3.48659820374453e-060.558767783536701
LGGCAediting_1457544chr22_16653109_+....0.0001621361716595170.451146953343736
LGGCAediting_1457556chr22_16653176_+0.0002992672083810920.242083082458715....
BRCACAediting_1457556chr22_16653176_+4.20755218709895e-070.31465914828816....
THCACAediting_1457556chr22_16653176_+0.0007158810356734270.194932229940899....
SARCCAediting_1457556chr22_16653176_+0.0138280149043920.283164777903349....
THYMCAediting_1457556chr22_16653176_+0.04983918092774430.222874638570535....
BRCACAediting_1457580chr22_16653395_+6.28496270176773e-070.356604306870862....
THCACAediting_1457580chr22_16653395_+0.03927011681582580.155985787746701....
TGCTCAediting_1457580chr22_16653395_+....0.0009880627319033620.390685116279149
LGGCAediting_1457589chr22_16653441_+0.0005392183966031310.22840380126172....
BRCACAediting_1457589chr22_16653441_+0.001308750785940550.221943422136344....
THCACAediting_1457589chr22_16653441_+0.0009053506604987450.189998023951126....
SARCCAediting_1457589chr22_16653441_+0.03209954260782570.25465802991588....
THYMCAediting_1457589chr22_16653441_+4.71202426534312e-050.46042125959987....
THCACAediting_1457597chr22_16653489_+0.002667418398980640.366608361800063....
BRCACAediting_1457607chr22_16653505_+....0.02930443085311250.228585714246984
LGGCAediting_1457611chr22_16653525_+0.02651052699001960.293856324571314....
BRCACAediting_1457611chr22_16653525_+0.02148223925342220.24487363284234....
THCACAediting_1457611chr22_16653525_+0.0008114274354563380.292373588323905....
BRCACAediting_1457612chr22_16653531_+0.003162408981582440.355417979485645....
LGGCAediting_1457613chr22_16653532_+6.50890328459707e-050.354846703931732....
BRCACAediting_1457613chr22_16653532_+0.0001012900434097290.300660039885129....
THCACAediting_1457613chr22_16653532_+0.0005414310527330310.256035981859716....
BRCACAediting_1457615chr22_16653541_+0.001805762329308970.164830475429851....
PRADCAediting_1457615chr22_16653541_+....0.04965582643839090.171214676533196
THCACAediting_1457615chr22_16653541_+0.01247887348123860.124506633577168....
KIRPCAediting_1457615chr22_16653541_+0.04267367585743790.170353139609778....
THYMCAediting_1457615chr22_16653541_+0.001157645110774390.321899071979332....

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Relation with cancer stages for TPTEP1

check button Correlation between Cancer stages and RNA editing frequency
CancerStage_typeCAeditomIDpositionP-valCoeff.
BRCApathologic_stageCAediting_1457544chr22_16653109_+0.03581404058285820.186465823309653
KIRPclinical_stageCAediting_1457589chr22_16653441_+0.01991618086513650.3131495842903
KIRPpathologic_stageCAediting_1457514chr22_16648623_+0.009514488793028640.284764976207455
KIRPpathologic_stageCAediting_1457533chr22_16648741_+0.003140063355724720.378233186854601
KIRPpathologic_stageCAediting_1457589chr22_16653441_+0.003864129951606550.323497973904192
THCApathologic_stageCAediting_1457533chr22_16648741_+0.02247497889010730.125994236673509
THCApathologic_stageCAediting_1457556chr22_16653176_+0.005483006474565040.161591956608089
THCApathologic_stageCAediting_1457611chr22_16653525_+0.02546472280740550.199827461171916
THCApathologic_stageCAediting_1457613chr22_16653532_+0.01731324682510460.179220332767046

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Relation with survival for TPTEP1

check button Correlation between RNA editing and survival
CancerCAeditomIDpositionKMpvalueCoxpvalueCoxHR

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RelatedDrugs for TPTEP1

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for TPTEP1

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease name# pubmedsSource