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![]() | Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples |
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![]() | The effects of the RNA editing to the stability of the RNA structures |
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Editing gene: KLRC3 (CAeditome ID:3823) |
Gene summary for KLRC3 |
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Gene information | Gene symbol | KLRC3 | Gene ID | 3823 |
Gene name | killer cell lectin like receptor C3 | |
Synonyms | NKG2-E|NKG2E | |
Cytomap | 12p13.2 | |
Type of gene | protein-coding | |
Description | NKG2-E type II integral membrane proteinNK cell receptor ENKG2-E-activating NK receptorkiller cell lectin-like receptor subfamily C, member 3 | |
Modification date | 20210518 | |
UniProtAcc | Q07444 | |
Context |
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Gene | GO ID | GO term | PubMed ID |
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RNA A-to-I events for KLRC3 |
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CAediting_867911(10412579, -), CAediting_867912(10413648, -), CAediting_867913(10413650, -), CAediting_867914(10413651, -), CAediting_867915(10413658, -), CAediting_867916(10413684, -), CAediting_867917(10413685, -), CAediting_867918(10413686, -), CAediting_867919(10413688, -), CAediting_867920(10413689, -), CAediting_867921(10413693, -), CAediting_867922(10413705, -), CAediting_867923(10413710, -), CAediting_867924(10413712, -), CAediting_867925(10413718, -), CAediting_867926(10413721, -), CAediting_867927(10413734, -), CAediting_867928(10413741, -), CAediting_867929(10413742, -), CAediting_867930(10413746, -), CAediting_867931(10413754, -), CAediting_867932(10414590, -), CAediting_867933(10414712, -), CAediting_867934(10414743, -), CAediting_867935(10414749, -), CAediting_867936(10414750, -), CAediting_867937(10414757, -), CAediting_867938(10414760, -), |
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RNA editing positional annotations for KLRC3 using Annovar |
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CAeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
CAediting_867911 | chr12_10412579_- | nonsynonymous SNV | ENST00000396439.5 | c.A716G | p.N239S | D | B | N |
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CAeditome ID | Position | Variant type |
CAediting_867911 | chr12_10412579_- | exonic |
CAediting_867912 | chr12_10413648_- | intronic |
CAediting_867913 | chr12_10413650_- | intronic |
CAediting_867914 | chr12_10413651_- | intronic |
CAediting_867915 | chr12_10413658_- | intronic |
CAediting_867916 | chr12_10413684_- | intronic |
CAediting_867917 | chr12_10413685_- | intronic |
CAediting_867918 | chr12_10413686_- | intronic |
CAediting_867919 | chr12_10413688_- | intronic |
CAediting_867920 | chr12_10413689_- | intronic |
CAediting_867921 | chr12_10413693_- | intronic |
CAediting_867922 | chr12_10413705_- | intronic |
CAediting_867923 | chr12_10413710_- | intronic |
CAediting_867924 | chr12_10413712_- | intronic |
CAediting_867925 | chr12_10413718_- | intronic |
CAediting_867926 | chr12_10413721_- | intronic |
CAediting_867927 | chr12_10413734_- | intronic |
CAediting_867928 | chr12_10413741_- | intronic |
CAediting_867929 | chr12_10413742_- | intronic |
CAediting_867930 | chr12_10413746_- | intronic |
CAediting_867931 | chr12_10413754_- | intronic |
CAediting_867932 | chr12_10414590_- | intronic |
CAediting_867933 | chr12_10414712_- | intronic |
CAediting_867934 | chr12_10414743_- | intronic |
CAediting_867935 | chr12_10414749_- | intronic |
CAediting_867936 | chr12_10414750_- | intronic |
CAediting_867937 | chr12_10414757_- | intronic |
CAediting_867938 | chr12_10414760_- | intronic |
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CAeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
CAediting_867911 | chr12_10412579_- | SINE | Alu | AluJb |
CAediting_867912 | chr12_10413648_- | LINE | L1 | L1PA6 |
CAediting_867913 | chr12_10413650_- | LINE | L1 | L1PA6 |
CAediting_867914 | chr12_10413651_- | LINE | L1 | L1PA6 |
CAediting_867915 | chr12_10413658_- | LINE | L1 | L1PA6 |
CAediting_867916 | chr12_10413684_- | LINE | L1 | L1PA6 |
CAediting_867917 | chr12_10413685_- | LINE | L1 | L1PA6 |
CAediting_867918 | chr12_10413686_- | LINE | L1 | L1PA6 |
CAediting_867919 | chr12_10413688_- | LINE | L1 | L1PA6 |
CAediting_867920 | chr12_10413689_- | LINE | L1 | L1PA6 |
CAediting_867921 | chr12_10413693_- | LINE | L1 | L1PA6 |
CAediting_867922 | chr12_10413705_- | LINE | L1 | L1PA6 |
CAediting_867923 | chr12_10413710_- | LINE | L1 | L1PA6 |
CAediting_867924 | chr12_10413712_- | LINE | L1 | L1PA6 |
CAediting_867925 | chr12_10413718_- | LINE | L1 | L1PA6 |
CAediting_867926 | chr12_10413721_- | LINE | L1 | L1PA6 |
CAediting_867927 | chr12_10413734_- | LINE | L1 | L1PA6 |
CAediting_867928 | chr12_10413741_- | LINE | L1 | L1PA6 |
CAediting_867929 | chr12_10413742_- | LINE | L1 | L1PA6 |
CAediting_867930 | chr12_10413746_- | LINE | L1 | L1PA6 |
CAediting_867931 | chr12_10413754_- | LINE | L1 | L1PA6 |
CAediting_867932 | chr12_10414590_- | LINE | L1 | L1PA4 |
CAediting_867933 | chr12_10414712_- | LINE | L1 | L1PA4 |
CAediting_867934 | chr12_10414743_- | LINE | L1 | L1PA4 |
CAediting_867935 | chr12_10414749_- | LINE | L1 | L1PA4 |
CAediting_867936 | chr12_10414750_- | LINE | L1 | L1PA4 |
CAediting_867937 | chr12_10414757_- | LINE | L1 | L1PA4 |
CAediting_867938 | chr12_10414760_- | LINE | L1 | L1PA4 |
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RNA A-to-I editing events in the alternative splicing sites for KLRC3 |
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AStype | CAeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
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Differntial gene expression between RNA A-to-I edited versus non-edited samples for KLRC3 |
![]() * The grey color means N/A. |
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Protein coding region RNA A-to-I editings for KLRC3 |
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The effects of the RNA editing to the miRNA binding sites for KLRC3 |
**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page. |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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The effects of the RNA editing to the stability of the RNA structures for KLRC3 |
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ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
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CAeditom_ID | ENST | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
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Relation with ADAR for KLRC3 |
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Cancer | CAeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
LGG | CAediting_867915 | chr12_10413658_- | 0.0102683753308138 | 0.343381921331198 | 0.0124734947418343 | 0.33479752526649 | . | . |
LGG | CAediting_867916 | chr12_10413684_- | 0.0199417995666341 | 0.160523882786022 | 0.00975264821769873 | 0.177982028001483 | . | . |
LGG | CAediting_867917 | chr12_10413685_- | 0.0179330927492213 | 0.185215847450564 | . | . | . | . |
LGG | CAediting_867919 | chr12_10413688_- | 0.0258086148848201 | 0.159629004969552 | . | . | . | . |
LGG | CAediting_867920 | chr12_10413689_- | 2.55691393444561e-06 | 0.266413164660663 | . | . | . | . |
LGG | CAediting_867929 | chr12_10413742_- | . | . | 1.16314069596184e-06 | 0.334259871905123 | . | . |
LGG | CAediting_867931 | chr12_10413754_- | 0.0476642088177994 | 0.17968020743903 | . | . | 0.00591563539841498 | 0.247843597046232 |
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Relation with cancer stages for KLRC3 |
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Cancer | Stage_type | CAeditomID | position | P-val | Coeff. |
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Relation with survival for KLRC3 |
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Cancer | CAeditomID | position | KMpvalue | Coxpvalue | CoxHR |
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RelatedDrugs for KLRC3 |
![]() (DrugBank Version 5.1.8 2021-01-03) |
Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for KLRC3 |
![]() (DisGeNet 7.0) |
Gene | Disease ID | Disease name | # pubmeds | Source |