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Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with cancer stages

Soverview

Relation with survival state

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene

Editing gene: KIF5B (CAeditome ID:3799)

Gene summary for KIF5B

check button Gene summary
Gene informationGene symbol

KIF5B

Gene ID

3799

Gene namekinesin family member 5B
SynonymsHEL-S-61|KINH|KNS|KNS1|UKHC
Cytomap

10p11.22

Type of geneprotein-coding
Descriptionkinesin-1 heavy chainconventional kinesin heavy chainepididymis secretory protein Li 61kinesin 1 (110-120kD)kinesin heavy chainubiquitous kinesin heavy chain
Modification date20210518
UniProtAcc

P33176

Context- 30058692(Expression of Kif5b protein is significantly associated with the progression, recurrence and prognosis of oral squamous cell carcinoma)

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID
KIF5B

GO:0003777

Kinesin-1 heavy chain

28426968

KIF5B

GO:0008017

Kinesin-1 heavy chain

28426968

KIF5B

GO:0042391

Kinesin-1 heavy chain

19675065

KIF5B

GO:0043268

Kinesin-1 heavy chain

19675065

KIF5B

GO:0047496

Kinesin-1 heavy chain

28426968

KIF5B

GO:1903078

Kinesin-1 heavy chain

19675065

KIF5B

GO:0005829

Kinesin-1 heavy chain

0000052

KIF5B

GO:0031982

Kinesin-1 heavy chain

20682791

KIF5B

GO:0034451

Kinesin-1 heavy chain

0000052


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RNA A-to-I events for KIF5B

check buttonRNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.
all structure

check button RNA editing frequencies across 33 cancers of gene: ENSG00000170759.10

check button RNA A-to-I editing events in Cancer.
CAediting_742542(32012228, -), CAediting_742543(32012230, -), CAediting_742544(32012256, -), CAediting_742545(32012261, -), CAediting_742546(32012268, -), CAediting_742547(32012281, -), CAediting_742548(32012303, -), CAediting_742549(32012307, -), CAediting_742550(32012310, -), CAediting_742551(32012353, -), CAediting_742552(32012363, -), CAediting_742553(32012390, -), CAediting_742554(32012393, -), CAediting_742555(32012394, -), CAediting_742556(32012438, -), CAediting_742557(32012931, -), CAediting_742558(32012969, -), CAediting_742559(32012978, -), CAediting_742560(32012994, -), CAediting_742561(32012998, -), CAediting_742562(32012999, -), CAediting_742563(32013013, -), CAediting_742564(32013039, -), CAediting_742565(32013050, -), CAediting_742566(32013063, -), CAediting_742567(32013066, -), CAediting_742568(32013070, -), CAediting_742569(32013094, -), CAediting_742570(32013102, -), CAediting_742571(32013104, -), CAediting_742572(32013105, -), CAediting_742573(32013108, -), CAediting_742574(32013125, -), CAediting_742575(32013128, -), CAediting_742576(32013133, -), CAediting_742577(32013138, -), CAediting_742578(32013151, -), CAediting_742579(32013172, -), CAediting_742580(32013173, -), CAediting_742581(32013179, -), CAediting_742582(32013181, -), CAediting_742583(32013189, -), CAediting_742584(32014269, -), CAediting_742585(32014279, -), CAediting_742586(32014283, -), CAediting_742587(32014291, -), CAediting_742588(32014304, -), CAediting_742589(32014309, -), CAediting_742590(32014315, -), CAediting_742591(32014384, -), CAediting_742592(32014388, -), CAediting_742593(32014390, -), CAediting_742594(32014843, -), CAediting_742595(32014920, -), CAediting_742596(32014976, -), CAediting_742597(32014977, -), CAediting_742598(32015070, -), CAediting_742599(32015109, -), CAediting_742600(32015114, -), CAediting_742601(32015869, -), CAediting_742602(32015909, -), CAediting_742603(32015914, -), CAediting_742604(32015925, -), CAediting_742605(32015926, -), CAediting_742606(32015927, -), CAediting_742607(32015985, -), CAediting_742608(32015995, -), CAediting_742609(32015996, -), CAediting_742610(32016000, -), CAediting_742611(32016004, -), CAediting_742612(32016022, -), CAediting_742613(32016049, -), CAediting_742614(32016058, -), CAediting_742615(32016113, -), CAediting_742616(32016542, -), CAediting_742617(32016556, -), CAediting_742618(32016630, -), CAediting_742619(32016647, -), CAediting_742620(32016708, -), CAediting_742621(32016710, -), CAediting_742622(32016711, -), CAediting_742623(32016712, -), CAediting_742624(32018792, -), CAediting_742625(32018821, -), CAediting_742626(32024625, -), CAediting_742627(32024842, -), CAediting_742628(32024922, -), CAediting_742629(32025418, -), CAediting_742630(32025464, -), CAediting_742631(32025649, -), CAediting_742632(32026245, -), CAediting_742633(32027727, -), CAediting_742634(32027733, -), CAediting_742635(32027798, -), CAediting_742636(32027799, -), CAediting_742637(32027854, -), CAediting_742638(32027870, -), CAediting_742639(32027875, -), CAediting_742640(32027876, -), CAediting_742641(32027883, -), CAediting_742642(32027898, -), CAediting_742643(32034288, -), CAediting_742644(32040821, -), CAediting_742645(32041824, -), CAediting_742646(32041828, -), CAediting_742647(32041898, -), CAediting_742648(32041919, -), CAediting_742649(32043276, -), CAediting_742650(32044415, -), CAediting_742651(32044427, -), CAediting_742652(32044506, -), CAediting_742653(32044550, -), CAediting_742654(32046691, -), CAediting_742655(32046697, -),

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RNA editing positional annotations for KIF5B using Annovar

check button Protein coding RNA editing(s).
CAeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred

check button Gene structure information of RNA editing(s).
CAeditome IDPositionVariant type
CAediting_742542chr10_32012228_-intronic
CAediting_742543chr10_32012230_-intronic
CAediting_742544chr10_32012256_-intronic
CAediting_742545chr10_32012261_-intronic
CAediting_742546chr10_32012268_-intronic
CAediting_742547chr10_32012281_-intronic
CAediting_742548chr10_32012303_-intronic
CAediting_742549chr10_32012307_-intronic
CAediting_742550chr10_32012310_-intronic
CAediting_742551chr10_32012353_-intronic
CAediting_742552chr10_32012363_-intronic
CAediting_742553chr10_32012390_-intronic
CAediting_742554chr10_32012393_-intronic
CAediting_742555chr10_32012394_-intronic
CAediting_742556chr10_32012438_-intronic
CAediting_742557chr10_32012931_-intronic
CAediting_742558chr10_32012969_-intronic
CAediting_742559chr10_32012978_-intronic
CAediting_742560chr10_32012994_-intronic
CAediting_742561chr10_32012998_-intronic
CAediting_742562chr10_32012999_-intronic
CAediting_742563chr10_32013013_-intronic
CAediting_742564chr10_32013039_-intronic
CAediting_742565chr10_32013050_-intronic
CAediting_742566chr10_32013063_-intronic
CAediting_742567chr10_32013066_-intronic
CAediting_742568chr10_32013070_-intronic
CAediting_742569chr10_32013094_-intronic
CAediting_742570chr10_32013102_-intronic
CAediting_742571chr10_32013104_-intronic
CAediting_742572chr10_32013105_-intronic
CAediting_742573chr10_32013108_-intronic
CAediting_742574chr10_32013125_-intronic
CAediting_742575chr10_32013128_-intronic
CAediting_742576chr10_32013133_-intronic
CAediting_742577chr10_32013138_-intronic
CAediting_742578chr10_32013151_-intronic
CAediting_742579chr10_32013172_-intronic
CAediting_742580chr10_32013173_-intronic
CAediting_742581chr10_32013179_-intronic
CAediting_742582chr10_32013181_-intronic
CAediting_742583chr10_32013189_-intronic
CAediting_742584chr10_32014269_-intronic
CAediting_742585chr10_32014279_-intronic
CAediting_742586chr10_32014283_-intronic
CAediting_742587chr10_32014291_-intronic
CAediting_742588chr10_32014304_-intronic
CAediting_742589chr10_32014309_-intronic
CAediting_742590chr10_32014315_-intronic
CAediting_742591chr10_32014384_-intronic
CAediting_742592chr10_32014388_-intronic
CAediting_742593chr10_32014390_-intronic
CAediting_742594chr10_32014843_-intronic
CAediting_742595chr10_32014920_-intronic
CAediting_742596chr10_32014976_-intronic
CAediting_742597chr10_32014977_-intronic
CAediting_742598chr10_32015070_-intronic
CAediting_742599chr10_32015109_-intronic
CAediting_742600chr10_32015114_-intronic
CAediting_742601chr10_32015869_-intronic
CAediting_742602chr10_32015909_-intronic
CAediting_742603chr10_32015914_-intronic
CAediting_742604chr10_32015925_-intronic
CAediting_742605chr10_32015926_-intronic
CAediting_742606chr10_32015927_-intronic
CAediting_742607chr10_32015985_-intronic
CAediting_742608chr10_32015995_-intronic
CAediting_742609chr10_32015996_-intronic
CAediting_742610chr10_32016000_-intronic
CAediting_742611chr10_32016004_-intronic
CAediting_742612chr10_32016022_-intronic
CAediting_742613chr10_32016049_-intronic
CAediting_742614chr10_32016058_-intronic
CAediting_742615chr10_32016113_-intronic
CAediting_742616chr10_32016542_-intronic
CAediting_742617chr10_32016556_-intronic
CAediting_742618chr10_32016630_-intronic
CAediting_742619chr10_32016647_-intronic
CAediting_742620chr10_32016708_-intronic
CAediting_742621chr10_32016710_-intronic
CAediting_742622chr10_32016711_-intronic
CAediting_742623chr10_32016712_-intronic
CAediting_742624chr10_32018792_-ncRNA_intronic
CAediting_742625chr10_32018821_-ncRNA_intronic
CAediting_742626chr10_32024625_-intronic
CAediting_742627chr10_32024842_-intronic
CAediting_742628chr10_32024922_-intronic
CAediting_742629chr10_32025418_-intronic
CAediting_742630chr10_32025464_-intronic
CAediting_742631chr10_32025649_-intronic
CAediting_742632chr10_32026245_-intronic
CAediting_742633chr10_32027727_-intronic
CAediting_742634chr10_32027733_-intronic
CAediting_742635chr10_32027798_-intronic
CAediting_742636chr10_32027799_-intronic
CAediting_742637chr10_32027854_-intronic
CAediting_742638chr10_32027870_-intronic
CAediting_742639chr10_32027875_-intronic
CAediting_742640chr10_32027876_-intronic
CAediting_742641chr10_32027883_-intronic
CAediting_742642chr10_32027898_-intronic
CAediting_742643chr10_32034288_-intronic
CAediting_742644chr10_32040821_-intronic
CAediting_742645chr10_32041824_-intronic
CAediting_742646chr10_32041828_-intronic
CAediting_742647chr10_32041898_-intronic
CAediting_742648chr10_32041919_-intronic
CAediting_742649chr10_32043276_-intronic
CAediting_742650chr10_32044415_-intronic
CAediting_742651chr10_32044427_-intronic
CAediting_742652chr10_32044506_-intronic
CAediting_742653chr10_32044550_-intronic
CAediting_742654chr10_32046691_-intronic
CAediting_742655chr10_32046697_-intronic

check button Repat-regional RNA editing(s).
CAeditome IDPositionRepeat familyRepeat sub familyRepeat name
CAediting_742542chr10_32012228_-SINEAluAluSx1
CAediting_742543chr10_32012230_-SINEAluAluSx1
CAediting_742544chr10_32012256_-SINEAluAluSx1
CAediting_742545chr10_32012261_-SINEAluAluSx1
CAediting_742546chr10_32012268_-SINEAluAluSx1
CAediting_742547chr10_32012281_-SINEAluAluSx1
CAediting_742548chr10_32012303_-SINEAluAluSx1
CAediting_742549chr10_32012307_-SINEAluAluSx1
CAediting_742550chr10_32012310_-SINEAluAluSx1
CAediting_742551chr10_32012353_-SINEAluAluSx1
CAediting_742552chr10_32012363_-SINEAluAluSx1
CAediting_742553chr10_32012390_-SINEAluAluSx1
CAediting_742554chr10_32012393_-SINEAluAluSx1
CAediting_742555chr10_32012394_-SINEAluAluSx1
CAediting_742556chr10_32012438_-SINEAluAluSx1
CAediting_742557chr10_32012931_-SINEAluAluSp
CAediting_742558chr10_32012969_-SINEAluAluSp
CAediting_742559chr10_32012978_-SINEAluAluSp
CAediting_742560chr10_32012994_-SINEAluAluSp
CAediting_742561chr10_32012998_-SINEAluAluSp
CAediting_742562chr10_32012999_-SINEAluAluSp
CAediting_742563chr10_32013013_-SINEAluAluSp
CAediting_742564chr10_32013039_-SINEAluAluSp
CAediting_742565chr10_32013050_-SINEAluAluSp
CAediting_742566chr10_32013063_-SINEAluAluSp
CAediting_742567chr10_32013066_-SINEAluAluSp
CAediting_742568chr10_32013070_-SINEAluAluSp
CAediting_742569chr10_32013094_-SINEAluAluSp
CAediting_742570chr10_32013102_-SINEAluAluSp
CAediting_742571chr10_32013104_-SINEAluAluSp
CAediting_742572chr10_32013105_-SINEAluAluSp
CAediting_742573chr10_32013108_-SINEAluAluSp
CAediting_742574chr10_32013125_-SINEAluAluSp
CAediting_742575chr10_32013128_-SINEAluAluSp
CAediting_742576chr10_32013133_-SINEAluAluSp
CAediting_742577chr10_32013138_-SINEAluAluSp
CAediting_742578chr10_32013151_-SINEAluAluSp
CAediting_742579chr10_32013172_-SINEAluAluSp
CAediting_742580chr10_32013173_-SINEAluAluSp
CAediting_742581chr10_32013179_-SINEAluAluSp
CAediting_742582chr10_32013181_-SINEAluAluSp
CAediting_742583chr10_32013189_-SINEAluAluSp
CAediting_742584chr10_32014269_-SINEAluAluSp
CAediting_742585chr10_32014279_-SINEAluAluSp
CAediting_742586chr10_32014283_-SINEAluAluSp
CAediting_742587chr10_32014291_-SINEAluAluSp
CAediting_742588chr10_32014304_-SINEAluAluSp
CAediting_742589chr10_32014309_-SINEAluAluSp
CAediting_742590chr10_32014315_-SINEAluAluSp
CAediting_742591chr10_32014384_-SINEAluAluSp
CAediting_742592chr10_32014388_-SINEAluAluSp
CAediting_742593chr10_32014390_-SINEAluAluSp
CAediting_742594chr10_32014843_-SINEAluAluSq2
CAediting_742595chr10_32014920_-SINEAluAluSq2
CAediting_742596chr10_32014976_-SINEAluAluSq2
CAediting_742597chr10_32014977_-SINEAluAluSq2
CAediting_742598chr10_32015070_-SINEAluAluSq2
CAediting_742599chr10_32015109_-SINEAluAluSq2
CAediting_742600chr10_32015114_-SINEAluAluSq2
CAediting_742601chr10_32015869_-SINEAluAluJb
CAediting_742602chr10_32015909_-SINEAluAluJb
CAediting_742603chr10_32015914_-SINEAluAluJb
CAediting_742604chr10_32015925_-SINEAluAluJb
CAediting_742605chr10_32015926_-SINEAluAluJb
CAediting_742606chr10_32015927_-SINEAluAluJb
CAediting_742607chr10_32015985_-SINEAluAluJb
CAediting_742608chr10_32015995_-SINEAluAluJb
CAediting_742609chr10_32015996_-SINEAluAluJb
CAediting_742610chr10_32016000_-SINEAluAluJb
CAediting_742611chr10_32016004_-SINEAluAluJb
CAediting_742612chr10_32016022_-SINEAluAluJb
CAediting_742613chr10_32016049_-SINEAluAluJb
CAediting_742614chr10_32016058_-SINEAluAluJb
CAediting_742615chr10_32016113_-SINEAluAluJb
CAediting_742616chr10_32016542_-SINEAluAluSx1
CAediting_742617chr10_32016556_-SINEAluAluSx1
CAediting_742618chr10_32016630_-SINEAluAluSx1
CAediting_742619chr10_32016647_-SINEAluAluSx1
CAediting_742620chr10_32016708_-SINEAluAluSx1
CAediting_742621chr10_32016710_-SINEAluAluSx1
CAediting_742622chr10_32016711_-SINEAluAluSx1
CAediting_742623chr10_32016712_-SINEAluAluSx1
CAediting_742624chr10_32018792_-SINEAluAluJb
CAediting_742625chr10_32018821_-SINEAluAluJb
CAediting_742626chr10_32024625_-SINEAluAluSx1
CAediting_742627chr10_32024842_-SINEAluAluSx
CAediting_742628chr10_32024922_-SINEAluAluSx
CAediting_742629chr10_32025418_-SINEAluAluSz6
CAediting_742630chr10_32025464_-SINEAluAluSz6
CAediting_742631chr10_32025649_-SINEAluAluSz6
CAediting_742632chr10_32026245_-SINEAluAluY
CAediting_742633chr10_32027727_-SINEAluAluJo
CAediting_742634chr10_32027733_-SINEAluAluJo
CAediting_742635chr10_32027798_-SINEAluAluJo
CAediting_742636chr10_32027799_-SINEAluAluJo
CAediting_742637chr10_32027854_-SINEAluAluJo
CAediting_742638chr10_32027870_-SINEAluAluJo
CAediting_742639chr10_32027875_-SINEAluAluJo
CAediting_742640chr10_32027876_-SINEAluAluJo
CAediting_742641chr10_32027883_-SINEAluAluJo
CAediting_742642chr10_32027898_-SINEAluAluJo
CAediting_742643chr10_32034288_-SINEAluAluSz
CAediting_742644chr10_32040821_-SINEAluAluSx3
CAediting_742645chr10_32041824_-SINEAluAluJo
CAediting_742646chr10_32041828_-SINEAluAluJo
CAediting_742647chr10_32041898_-SINEAluAluJo
CAediting_742648chr10_32041919_-SINEAluAluJo
CAediting_742649chr10_32043276_-SINEAluAluSx
CAediting_742650chr10_32044415_-SINEAluAluSp
CAediting_742651chr10_32044427_-SINEAluAluSp
CAediting_742652chr10_32044506_-SINEAluAluSp
CAediting_742653chr10_32044550_-SINEAluAluSp
CAediting_742654chr10_32046691_-SINEAluAluJr
CAediting_742655chr10_32046697_-SINEAluAluJr

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RNA A-to-I editing events in the alternative splicing sites for KIF5B

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeCAeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength

check button Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000170759.10.KIF5B.

check button Correlation between RNA A-to-I editing and PSI for ENSG00000170759.10.KIF5B.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for KIF5B

check button Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.
boxplot

check button Correlation between RNA A-to-I editing and gene expression.
boxplot

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for KIF5B

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.


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The effects of the RNA editing to the miRNA binding sites for KIF5B

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for KIF5B

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.

check button RNA A-to-I editing in RNA structures for Minimum free energy (MFE).
CAeditom_IDENSTEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI

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Relation with ADAR for KIF5B

check button Correlation between ADAR gene expression and RNA editing frequency
CancerCAeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)

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Relation with cancer stages for KIF5B

check button Correlation between Cancer stages and RNA editing frequency
CancerStage_typeCAeditomIDpositionP-valCoeff.

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Relation with survival for KIF5B

check button Correlation between RNA editing and survival
CancerCAeditomIDpositionKMpvalueCoxpvalueCoxHR

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RelatedDrugs for KIF5B

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for KIF5B

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease name# pubmedsSource
KIF5BC0007131Non-Small Cell Lung Carcinoma1CTD_human
KIF5BC0011849Diabetes Mellitus1CTD_human