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Editing gene: SFT2D2 (CAeditome ID:375035)

Gene summary for SFT2D2

Gene summary

Gene information	Gene symbol	SFT2D2
	Gene ID	375035
	Gene name	SFT2 domain containing 2
	Synonyms	UNQ512\|dJ747L4.C1.2
	Cytomap	1q24.2
	Type of gene	protein-coding
	Description	vesicle transport protein SFT2BSFT2 domain-containing protein 2
	Modification date	20210518
	UniProtAcc	O95562
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene

GO ID

GO term

PubMed ID

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RNA A-to-I events for SFT2D2

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000213064.8

RNA A-to-I editing events in Cancer.

CAediting_119756(168230518, +), CAediting_119757(168238407, +), CAediting_119758(168238442, +), CAediting_119759(168240018, +), CAediting_119760(168240646, +), CAediting_119761(168240651, +), CAediting_119762(168240656, +), CAediting_119763(168240658, +), CAediting_119764(168240659, +), CAediting_119765(168240710, +), CAediting_119766(168240726, +), CAediting_119767(168240752, +), CAediting_119768(168240753, +), CAediting_119769(168240754, +), CAediting_119770(168240756, +), CAediting_119771(168240762, +), CAediting_119772(168240867, +), CAediting_119773(168244197, +), CAediting_119774(168244209, +), CAediting_119775(168244228, +), CAediting_119776(168244242, +), CAediting_119777(168244252, +), CAediting_119778(168244258, +), CAediting_119779(168244277, +), CAediting_119780(168244278, +), CAediting_119781(168244282, +), CAediting_119782(168244295, +), CAediting_119783(168244304, +), CAediting_119784(168244307, +), CAediting_119785(168244317, +), CAediting_119786(168244319, +), CAediting_119787(168244344, +), CAediting_119788(168244359, +), CAediting_119789(168244364, +), CAediting_119790(168244368, +), CAediting_119791(168244376, +), CAediting_119792(168244388, +), CAediting_119793(168244389, +), CAediting_119794(168244401, +), CAediting_119795(168244408, +), CAediting_119796(168244413, +), CAediting_119797(168244418, +), CAediting_119798(168244426, +), CAediting_119799(168244439, +), CAediting_119800(168244440, +), CAediting_119801(168244441, +), CAediting_119802(168247829, +), CAediting_119803(168247857, +), CAediting_119804(168247912, +), CAediting_119805(168247920, +), CAediting_119806(168247967, +), CAediting_119807(168247968, +), CAediting_119808(168249222, +), CAediting_119809(168249224, +), CAediting_119810(168249225, +), CAediting_119811(168249248, +), CAediting_119812(168249249, +), CAediting_119813(168249255, +), CAediting_119814(168249256, +), CAediting_119815(168249257, +), CAediting_119816(168249271, +), CAediting_119817(168249279, +), CAediting_119818(168249284, +), CAediting_119819(168249286, +), CAediting_119820(168249297, +), CAediting_119821(168249300, +), CAediting_119822(168249305, +), CAediting_119823(168249310, +), CAediting_119824(168249316, +), CAediting_119825(168249335, +), CAediting_119826(168249336, +), CAediting_119827(168249353, +), CAediting_119828(168249362, +), CAediting_119829(168249365, +), CAediting_119830(168249366, +), CAediting_119831(168249375, +), CAediting_119832(168249391, +), CAediting_119833(168249393, +), CAediting_119834(168249401, +), CAediting_119835(168249402, +), CAediting_119836(168249410, +), CAediting_119837(168249416, +), CAediting_119838(168249421, +), CAediting_119839(168249423, +), CAediting_119840(168249433, +), CAediting_119841(168249445, +), CAediting_119842(168249465, +), CAediting_119843(168249470, +), CAediting_119844(168249471, +), CAediting_119845(168249475, +), CAediting_119846(168249496, +), CAediting_119847(168249497, +), CAediting_119848(168249498, +), CAediting_119849(168249510, +), CAediting_119850(168249526, +), CAediting_119851(168249532, +), CAediting_119852(168251012, +), CAediting_119853(168251015, +), CAediting_119854(168251032, +), CAediting_119855(168251040, +), CAediting_119856(168251048, +), CAediting_119857(168251049, +), CAediting_119858(168251054, +), CAediting_119859(168251057, +), CAediting_119860(168251065, +), CAediting_119861(168251089, +), CAediting_119862(168251094, +), CAediting_119863(168251097, +), CAediting_119864(168251102, +), CAediting_119865(168251103, +), CAediting_119866(168251105, +), CAediting_119867(168251108, +), CAediting_119868(168251117, +), CAediting_119869(168251125, +), CAediting_119870(168251127, +), CAediting_119871(168251128, +), CAediting_119872(168251142, +), CAediting_119873(168251144, +), CAediting_119874(168251145, +), CAediting_119875(168251146, +), CAediting_119876(168251148, +), CAediting_119877(168251151, +), CAediting_119878(168251157, +), CAediting_119879(168251158, +), CAediting_119880(168251161, +), CAediting_119881(168251165, +), CAediting_119882(168251169, +), CAediting_119883(168251174, +), CAediting_119884(168251191, +), CAediting_119885(168251192, +), CAediting_119886(168251201, +), CAediting_119887(168251212, +), CAediting_119888(168251218, +), CAediting_119889(168251222, +), CAediting_119890(168251224, +), CAediting_119891(168251225, +), CAediting_119892(168251227, +), CAediting_119893(168251228, +), CAediting_119894(168251236, +), CAediting_119895(168251237, +), CAediting_119896(168251241, +), CAediting_119897(168251244, +), CAediting_119898(168251251, +), CAediting_119899(168251260, +), CAediting_119900(168251265, +), CAediting_119901(168251267, +), CAediting_119902(168251272, +), CAediting_119903(168251280, +), CAediting_119904(168251285, +), CAediting_119905(168251291, +), CAediting_119906(168251294, +), CAediting_119907(168251299, +), CAediting_119908(168251303, +), CAediting_119909(168251315, +), CAediting_119910(168251316, +), CAediting_119911(168251317, +), CAediting_119912(168251318, +), CAediting_119913(168251322, +), CAediting_119914(168251329, +),

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RNA editing positional annotations for SFT2D2 using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_119756	chr1_168230518_+	ncRNA_intronic
CAediting_119757	chr1_168238407_+	intronic
CAediting_119758	chr1_168238442_+	intronic
CAediting_119759	chr1_168240018_+	intronic
CAediting_119760	chr1_168240646_+	intronic
CAediting_119761	chr1_168240651_+	intronic
CAediting_119762	chr1_168240656_+	intronic
CAediting_119763	chr1_168240658_+	intronic
CAediting_119764	chr1_168240659_+	intronic
CAediting_119765	chr1_168240710_+	intronic
CAediting_119766	chr1_168240726_+	intronic
CAediting_119767	chr1_168240752_+	intronic
CAediting_119768	chr1_168240753_+	intronic
CAediting_119769	chr1_168240754_+	intronic
CAediting_119770	chr1_168240756_+	intronic
CAediting_119771	chr1_168240762_+	intronic
CAediting_119772	chr1_168240867_+	intronic
CAediting_119773	chr1_168244197_+	UTR3
CAediting_119774	chr1_168244209_+	UTR3
CAediting_119775	chr1_168244228_+	UTR3
CAediting_119776	chr1_168244242_+	UTR3
CAediting_119777	chr1_168244252_+	UTR3
CAediting_119778	chr1_168244258_+	UTR3
CAediting_119779	chr1_168244277_+	UTR3
CAediting_119780	chr1_168244278_+	UTR3
CAediting_119781	chr1_168244282_+	UTR3
CAediting_119782	chr1_168244295_+	UTR3
CAediting_119783	chr1_168244304_+	UTR3
CAediting_119784	chr1_168244307_+	UTR3
CAediting_119785	chr1_168244317_+	UTR3
CAediting_119786	chr1_168244319_+	UTR3
CAediting_119787	chr1_168244344_+	UTR3
CAediting_119788	chr1_168244359_+	UTR3
CAediting_119789	chr1_168244364_+	UTR3
CAediting_119790	chr1_168244368_+	UTR3
CAediting_119791	chr1_168244376_+	UTR3
CAediting_119792	chr1_168244388_+	UTR3
CAediting_119793	chr1_168244389_+	UTR3
CAediting_119794	chr1_168244401_+	UTR3
CAediting_119795	chr1_168244408_+	UTR3
CAediting_119796	chr1_168244413_+	UTR3
CAediting_119797	chr1_168244418_+	UTR3
CAediting_119798	chr1_168244426_+	UTR3
CAediting_119799	chr1_168244439_+	UTR3
CAediting_119800	chr1_168244440_+	UTR3
CAediting_119801	chr1_168244441_+	UTR3
CAediting_119802	chr1_168247829_+	UTR3
CAediting_119803	chr1_168247857_+	UTR3
CAediting_119804	chr1_168247912_+	UTR3
CAediting_119805	chr1_168247920_+	UTR3
CAediting_119806	chr1_168247967_+	UTR3
CAediting_119807	chr1_168247968_+	UTR3
CAediting_119808	chr1_168249222_+	UTR3
CAediting_119809	chr1_168249224_+	UTR3
CAediting_119810	chr1_168249225_+	UTR3
CAediting_119811	chr1_168249248_+	UTR3
CAediting_119812	chr1_168249249_+	UTR3
CAediting_119813	chr1_168249255_+	UTR3
CAediting_119814	chr1_168249256_+	UTR3
CAediting_119815	chr1_168249257_+	UTR3
CAediting_119816	chr1_168249271_+	UTR3
CAediting_119817	chr1_168249279_+	UTR3
CAediting_119818	chr1_168249284_+	UTR3
CAediting_119819	chr1_168249286_+	UTR3
CAediting_119820	chr1_168249297_+	UTR3
CAediting_119821	chr1_168249300_+	UTR3
CAediting_119822	chr1_168249305_+	UTR3
CAediting_119823	chr1_168249310_+	UTR3
CAediting_119824	chr1_168249316_+	UTR3
CAediting_119825	chr1_168249335_+	UTR3
CAediting_119826	chr1_168249336_+	UTR3
CAediting_119827	chr1_168249353_+	UTR3
CAediting_119828	chr1_168249362_+	UTR3
CAediting_119829	chr1_168249365_+	UTR3
CAediting_119830	chr1_168249366_+	UTR3
CAediting_119831	chr1_168249375_+	UTR3
CAediting_119832	chr1_168249391_+	UTR3
CAediting_119833	chr1_168249393_+	UTR3
CAediting_119834	chr1_168249401_+	UTR3
CAediting_119835	chr1_168249402_+	UTR3
CAediting_119836	chr1_168249410_+	UTR3
CAediting_119837	chr1_168249416_+	UTR3
CAediting_119838	chr1_168249421_+	UTR3
CAediting_119839	chr1_168249423_+	UTR3
CAediting_119840	chr1_168249433_+	UTR3
CAediting_119841	chr1_168249445_+	UTR3
CAediting_119842	chr1_168249465_+	UTR3
CAediting_119843	chr1_168249470_+	UTR3
CAediting_119844	chr1_168249471_+	UTR3
CAediting_119845	chr1_168249475_+	UTR3
CAediting_119846	chr1_168249496_+	UTR3
CAediting_119847	chr1_168249497_+	UTR3
CAediting_119848	chr1_168249498_+	UTR3
CAediting_119849	chr1_168249510_+	UTR3
CAediting_119850	chr1_168249526_+	UTR3
CAediting_119851	chr1_168249532_+	UTR3
CAediting_119852	chr1_168251012_+	UTR3
CAediting_119853	chr1_168251015_+	UTR3
CAediting_119854	chr1_168251032_+	UTR3
CAediting_119855	chr1_168251040_+	UTR3
CAediting_119856	chr1_168251048_+	UTR3
CAediting_119857	chr1_168251049_+	UTR3
CAediting_119858	chr1_168251054_+	UTR3
CAediting_119859	chr1_168251057_+	UTR3
CAediting_119860	chr1_168251065_+	UTR3
CAediting_119861	chr1_168251089_+	UTR3
CAediting_119862	chr1_168251094_+	UTR3
CAediting_119863	chr1_168251097_+	UTR3
CAediting_119864	chr1_168251102_+	UTR3
CAediting_119865	chr1_168251103_+	UTR3
CAediting_119866	chr1_168251105_+	UTR3
CAediting_119867	chr1_168251108_+	UTR3
CAediting_119868	chr1_168251117_+	UTR3
CAediting_119869	chr1_168251125_+	UTR3
CAediting_119870	chr1_168251127_+	UTR3
CAediting_119871	chr1_168251128_+	UTR3
CAediting_119872	chr1_168251142_+	UTR3
CAediting_119873	chr1_168251144_+	UTR3
CAediting_119874	chr1_168251145_+	UTR3
CAediting_119875	chr1_168251146_+	UTR3
CAediting_119876	chr1_168251148_+	UTR3
CAediting_119877	chr1_168251151_+	UTR3
CAediting_119878	chr1_168251157_+	UTR3
CAediting_119879	chr1_168251158_+	UTR3
CAediting_119880	chr1_168251161_+	UTR3
CAediting_119881	chr1_168251165_+	UTR3
CAediting_119882	chr1_168251169_+	UTR3
CAediting_119883	chr1_168251174_+	UTR3
CAediting_119884	chr1_168251191_+	UTR3
CAediting_119885	chr1_168251192_+	UTR3
CAediting_119886	chr1_168251201_+	UTR3
CAediting_119887	chr1_168251212_+	UTR3
CAediting_119888	chr1_168251218_+	UTR3
CAediting_119889	chr1_168251222_+	UTR3
CAediting_119890	chr1_168251224_+	UTR3
CAediting_119891	chr1_168251225_+	UTR3
CAediting_119892	chr1_168251227_+	UTR3
CAediting_119893	chr1_168251228_+	UTR3
CAediting_119894	chr1_168251236_+	UTR3
CAediting_119895	chr1_168251237_+	UTR3
CAediting_119896	chr1_168251241_+	UTR3
CAediting_119897	chr1_168251244_+	UTR3
CAediting_119898	chr1_168251251_+	UTR3
CAediting_119899	chr1_168251260_+	UTR3
CAediting_119900	chr1_168251265_+	UTR3
CAediting_119901	chr1_168251267_+	UTR3
CAediting_119902	chr1_168251272_+	UTR3
CAediting_119903	chr1_168251280_+	UTR3
CAediting_119904	chr1_168251285_+	UTR3
CAediting_119905	chr1_168251291_+	UTR3
CAediting_119906	chr1_168251294_+	UTR3
CAediting_119907	chr1_168251299_+	UTR3
CAediting_119908	chr1_168251303_+	UTR3
CAediting_119909	chr1_168251315_+	UTR3
CAediting_119910	chr1_168251316_+	UTR3
CAediting_119911	chr1_168251317_+	UTR3
CAediting_119912	chr1_168251318_+	UTR3
CAediting_119913	chr1_168251322_+	UTR3
CAediting_119914	chr1_168251329_+	UTR3

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_119756	chr1_168230518_+	SINE	Alu	AluSp
CAediting_119757	chr1_168238407_+	SINE	Alu	AluJr
CAediting_119758	chr1_168238442_+	SINE	Alu	AluJr
CAediting_119759	chr1_168240018_+	SINE	Alu	AluY
CAediting_119760	chr1_168240646_+	SINE	Alu	AluSg
CAediting_119761	chr1_168240651_+	SINE	Alu	AluSg
CAediting_119762	chr1_168240656_+	SINE	Alu	AluSg
CAediting_119763	chr1_168240658_+	SINE	Alu	AluSg
CAediting_119764	chr1_168240659_+	SINE	Alu	AluSg
CAediting_119765	chr1_168240710_+	SINE	Alu	AluSg
CAediting_119766	chr1_168240726_+	SINE	Alu	AluSg
CAediting_119767	chr1_168240752_+	SINE	Alu	AluSg
CAediting_119768	chr1_168240753_+	SINE	Alu	AluSg
CAediting_119769	chr1_168240754_+	SINE	Alu	AluSg
CAediting_119770	chr1_168240756_+	SINE	Alu	AluSg
CAediting_119771	chr1_168240762_+	SINE	Alu	AluSg
CAediting_119772	chr1_168240867_+	SINE	Alu	AluSg
CAediting_119773	chr1_168244197_+	SINE	Alu	AluSx1
CAediting_119774	chr1_168244209_+	SINE	Alu	AluSx1
CAediting_119775	chr1_168244228_+	SINE	Alu	AluSx1
CAediting_119776	chr1_168244242_+	SINE	Alu	AluSx1
CAediting_119777	chr1_168244252_+	SINE	Alu	AluSx1
CAediting_119778	chr1_168244258_+	SINE	Alu	AluSx1
CAediting_119779	chr1_168244277_+	SINE	Alu	AluSx1
CAediting_119780	chr1_168244278_+	SINE	Alu	AluSx1
CAediting_119781	chr1_168244282_+	SINE	Alu	AluSx1
CAediting_119782	chr1_168244295_+	SINE	Alu	AluSx1
CAediting_119783	chr1_168244304_+	SINE	Alu	AluSx1
CAediting_119784	chr1_168244307_+	SINE	Alu	AluSx1
CAediting_119785	chr1_168244317_+	SINE	Alu	AluSx1
CAediting_119786	chr1_168244319_+	SINE	Alu	AluSx1
CAediting_119787	chr1_168244344_+	SINE	Alu	AluSx1
CAediting_119788	chr1_168244359_+	SINE	Alu	AluSx1
CAediting_119789	chr1_168244364_+	SINE	Alu	AluSx1
CAediting_119790	chr1_168244368_+	SINE	Alu	AluSx1
CAediting_119791	chr1_168244376_+	SINE	Alu	AluSx1
CAediting_119792	chr1_168244388_+	SINE	Alu	AluSx1
CAediting_119793	chr1_168244389_+	SINE	Alu	AluSx1
CAediting_119794	chr1_168244401_+	SINE	Alu	AluSx1
CAediting_119795	chr1_168244408_+	SINE	Alu	AluSx1
CAediting_119796	chr1_168244413_+	SINE	Alu	AluSx1
CAediting_119797	chr1_168244418_+	SINE	Alu	AluSx1
CAediting_119798	chr1_168244426_+	SINE	Alu	AluSx1
CAediting_119799	chr1_168244439_+	SINE	Alu	AluSx1
CAediting_119800	chr1_168244440_+	SINE	Alu	AluSx1
CAediting_119801	chr1_168244441_+	SINE	Alu	AluSx1
CAediting_119802	chr1_168247829_+	LINE	L1	L1PA7
CAediting_119803	chr1_168247857_+	LINE	L1	L1PA7
CAediting_119804	chr1_168247912_+	LINE	L1	L1PA7
CAediting_119805	chr1_168247920_+	LINE	L1	L1PA7
CAediting_119806	chr1_168247967_+	LINE	L1	L1PA7
CAediting_119807	chr1_168247968_+	LINE	L1	L1PA7
CAediting_119808	chr1_168249222_+	LINE	L1	L1P1
CAediting_119809	chr1_168249224_+	LINE	L1	L1P1
CAediting_119810	chr1_168249225_+	LINE	L1	L1P1
CAediting_119811	chr1_168249248_+	LINE	L1	L1P1
CAediting_119812	chr1_168249249_+	LINE	L1	L1P1
CAediting_119813	chr1_168249255_+	SINE	Alu	AluSz
CAediting_119814	chr1_168249256_+	SINE	Alu	AluSz
CAediting_119815	chr1_168249257_+	SINE	Alu	AluSz
CAediting_119816	chr1_168249271_+	SINE	Alu	AluSz
CAediting_119817	chr1_168249279_+	SINE	Alu	AluSz
CAediting_119818	chr1_168249284_+	SINE	Alu	AluSz
CAediting_119819	chr1_168249286_+	SINE	Alu	AluSz
CAediting_119820	chr1_168249297_+	SINE	Alu	AluSz
CAediting_119821	chr1_168249300_+	SINE	Alu	AluSz
CAediting_119822	chr1_168249305_+	SINE	Alu	AluSz
CAediting_119823	chr1_168249310_+	SINE	Alu	AluSz
CAediting_119824	chr1_168249316_+	SINE	Alu	AluSz
CAediting_119825	chr1_168249335_+	SINE	Alu	AluSz
CAediting_119826	chr1_168249336_+	SINE	Alu	AluSz
CAediting_119827	chr1_168249353_+	SINE	Alu	AluSz
CAediting_119828	chr1_168249362_+	SINE	Alu	AluSz
CAediting_119829	chr1_168249365_+	SINE	Alu	AluSz
CAediting_119830	chr1_168249366_+	SINE	Alu	AluSz
CAediting_119831	chr1_168249375_+	SINE	Alu	AluSz
CAediting_119832	chr1_168249391_+	SINE	Alu	AluSz
CAediting_119833	chr1_168249393_+	SINE	Alu	AluSz
CAediting_119834	chr1_168249401_+	SINE	Alu	AluSz
CAediting_119835	chr1_168249402_+	SINE	Alu	AluSz
CAediting_119836	chr1_168249410_+	SINE	Alu	AluSz
CAediting_119837	chr1_168249416_+	SINE	Alu	AluSz
CAediting_119838	chr1_168249421_+	SINE	Alu	AluSz
CAediting_119839	chr1_168249423_+	SINE	Alu	AluSz
CAediting_119840	chr1_168249433_+	SINE	Alu	AluSz
CAediting_119841	chr1_168249445_+	SINE	Alu	AluSz
CAediting_119842	chr1_168249465_+	SINE	Alu	AluSz
CAediting_119843	chr1_168249470_+	SINE	Alu	AluSz
CAediting_119844	chr1_168249471_+	SINE	Alu	AluSz
CAediting_119845	chr1_168249475_+	SINE	Alu	AluSz
CAediting_119846	chr1_168249496_+	SINE	Alu	AluSz
CAediting_119847	chr1_168249497_+	SINE	Alu	AluSz
CAediting_119848	chr1_168249498_+	SINE	Alu	AluSz
CAediting_119849	chr1_168249510_+	SINE	Alu	AluSz
CAediting_119850	chr1_168249526_+	SINE	Alu	AluSz
CAediting_119851	chr1_168249532_+	SINE	Alu	AluSz
CAediting_119854	chr1_168251032_+	SINE	Alu	AluSz6
CAediting_119855	chr1_168251040_+	SINE	Alu	AluSz6
CAediting_119856	chr1_168251048_+	SINE	Alu	AluSz6
CAediting_119857	chr1_168251049_+	SINE	Alu	AluSz6
CAediting_119858	chr1_168251054_+	SINE	Alu	AluSz6
CAediting_119859	chr1_168251057_+	SINE	Alu	AluSz6
CAediting_119860	chr1_168251065_+	SINE	Alu	AluSz6
CAediting_119861	chr1_168251089_+	SINE	Alu	AluSz6
CAediting_119862	chr1_168251094_+	SINE	Alu	AluSz6
CAediting_119863	chr1_168251097_+	SINE	Alu	AluSz6
CAediting_119864	chr1_168251102_+	SINE	Alu	AluSz6
CAediting_119865	chr1_168251103_+	SINE	Alu	AluSz6
CAediting_119866	chr1_168251105_+	SINE	Alu	AluSz6
CAediting_119867	chr1_168251108_+	SINE	Alu	AluSz6
CAediting_119868	chr1_168251117_+	SINE	Alu	AluSz6
CAediting_119869	chr1_168251125_+	SINE	Alu	AluSz6
CAediting_119870	chr1_168251127_+	SINE	Alu	AluSz6
CAediting_119871	chr1_168251128_+	SINE	Alu	AluSz6
CAediting_119872	chr1_168251142_+	SINE	Alu	AluSz6
CAediting_119873	chr1_168251144_+	SINE	Alu	AluSz6
CAediting_119874	chr1_168251145_+	SINE	Alu	AluSz6
CAediting_119875	chr1_168251146_+	SINE	Alu	AluSz6
CAediting_119876	chr1_168251148_+	SINE	Alu	AluSz6
CAediting_119877	chr1_168251151_+	SINE	Alu	AluSz6
CAediting_119878	chr1_168251157_+	SINE	Alu	AluSz6
CAediting_119879	chr1_168251158_+	SINE	Alu	AluSz6
CAediting_119880	chr1_168251161_+	SINE	Alu	AluSz6
CAediting_119881	chr1_168251165_+	SINE	Alu	AluSz6
CAediting_119882	chr1_168251169_+	SINE	Alu	AluSz6
CAediting_119883	chr1_168251174_+	SINE	Alu	AluSz6
CAediting_119884	chr1_168251191_+	SINE	Alu	AluSz6
CAediting_119885	chr1_168251192_+	SINE	Alu	AluSz6
CAediting_119886	chr1_168251201_+	SINE	Alu	AluSz6
CAediting_119887	chr1_168251212_+	SINE	Alu	AluSz6
CAediting_119888	chr1_168251218_+	SINE	Alu	AluSz6
CAediting_119889	chr1_168251222_+	SINE	Alu	AluSz6
CAediting_119890	chr1_168251224_+	SINE	Alu	AluSz6
CAediting_119891	chr1_168251225_+	SINE	Alu	AluSz6
CAediting_119892	chr1_168251227_+	SINE	Alu	AluSz6
CAediting_119893	chr1_168251228_+	SINE	Alu	AluSz6
CAediting_119894	chr1_168251236_+	SINE	Alu	AluSz6
CAediting_119895	chr1_168251237_+	SINE	Alu	AluSz6
CAediting_119896	chr1_168251241_+	SINE	Alu	AluSz6
CAediting_119897	chr1_168251244_+	SINE	Alu	AluSz6
CAediting_119898	chr1_168251251_+	SINE	Alu	AluSz6
CAediting_119899	chr1_168251260_+	SINE	Alu	AluSz6
CAediting_119900	chr1_168251265_+	SINE	Alu	AluSz6
CAediting_119901	chr1_168251267_+	SINE	Alu	AluSz6
CAediting_119902	chr1_168251272_+	SINE	Alu	AluSz6
CAediting_119903	chr1_168251280_+	SINE	Alu	AluSz6
CAediting_119904	chr1_168251285_+	SINE	Alu	AluSz6
CAediting_119905	chr1_168251291_+	SINE	Alu	AluSz6
CAediting_119906	chr1_168251294_+	SINE	Alu	AluSz6
CAediting_119907	chr1_168251299_+	SINE	Alu	AluSz6
CAediting_119908	chr1_168251303_+	SINE	Alu	AluSz6
CAediting_119909	chr1_168251315_+	SINE	Alu	AluSz6
CAediting_119910	chr1_168251316_+	SINE	Alu	AluSz6
CAediting_119911	chr1_168251317_+	SINE	Alu	AluSz6
CAediting_119912	chr1_168251318_+	SINE	Alu	AluSz6
CAediting_119913	chr1_168251322_+	SINE	Alu	AluSz6
CAediting_119914	chr1_168251329_+	SINE	Alu	AluSz6

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RNA A-to-I editing events in the alternative splicing sites for SFT2D2

RNA A-to-I editing(s) in the alternative splicing sites.

AStype	CAeditomID	Editing position	AS position	AS direction	Exonic location	Wildtype sequence	Wildtype splicing strength	RNA edited sequence	RNA edited splicing strength
IR	CAediting_119861	chr1_168251089_+	168251089:168251111	3SS	0+20i	AGGTCAGGAGTTCAAGACCAGCC	-27.08	GGGTCAGGAGTTCAAGACCAGCC	-26.8
IR	CAediting_119862	chr1_168251094_+	168251089:168251111	3SS	0+15i	AGGTCAGGAGTTCAAGACCAGCC	-27.08	AGGTCGGGAGTTCAAGACCAGCC	-25.74
IR	CAediting_119863	chr1_168251097_+	168251089:168251111	3SS	0+12i	AGGTCAGGAGTTCAAGACCAGCC	-27.08	AGGTCAGGGGTTCAAGACCAGCC	-21.8
IR	CAediting_119864	chr1_168251102_+	168251089:168251111	3SS	0+7i	AGGTCAGGAGTTCAAGACCAGCC	-27.08	AGGTCAGGAGTTCGAGACCAGCC	-26.56
IR	CAediting_119865	chr1_168251103_+	168251089:168251111	3SS	0+6i	AGGTCAGGAGTTCAAGACCAGCC	-27.08	AGGTCAGGAGTTCAGGACCAGCC	-26.93
IR	CAediting_119866	chr1_168251105_+	168251089:168251111	3SS	0+4i	AGGTCAGGAGTTCAAGACCAGCC	-27.08	AGGTCAGGAGTTCAAGGCCAGCC	-27.2
IR	CAediting_119867	chr1_168251108_+	168251089:168251111	3SS	0+1i	AGGTCAGGAGTTCAAGACCAGCC	-27.08	AGGTCAGGAGTTCAAGACCGGCC	-18.33

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000213064.8.SFT2D2.

Correlation between RNA A-to-I editing and PSI for ENSG00000213064.8.SFT2D2.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for SFT2D2

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

READ.CAediting_119814.ENSG00000213064.SFT2D2.png
Soverview

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Protein coding region RNA A-to-I editings for SFT2D2

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for SFT2D2

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for SFT2D2

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST	ENST type	RNA structure without RNA A-to-I editing.	RNA structure with RNA A-to-I editing.
ENST00000271375.5	protein_coding

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID	ENST	Editing_Position	MFE_withoneAI	MFE_withoutAI	MFE_withmultipleAI
CAediting_119773	ENST00000271375.5	chr1_168244197_+	-3469.80	-3470.70	-3560.50
CAediting_119774	ENST00000271375.5	chr1_168244209_+	-3470.30	-3470.70	-3560.50
CAediting_119775	ENST00000271375.5	chr1_168244228_+	-3469.80	-3470.70	-3560.50
CAediting_119776	ENST00000271375.5	chr1_168244242_+	-3470.10	-3470.70	-3560.50
CAediting_119777	ENST00000271375.5	chr1_168244252_+	-3470.30	-3470.70	-3560.50
CAediting_119778	ENST00000271375.5	chr1_168244258_+	-3470.70	-3470.70	-3560.50
CAediting_119779	ENST00000271375.5	chr1_168244277_+	-3470.40	-3470.70	-3560.50
CAediting_119780	ENST00000271375.5	chr1_168244278_+	-3470.40	-3470.70	-3560.50
CAediting_119781	ENST00000271375.5	chr1_168244282_+	-3470.70	-3470.70	-3560.50
CAediting_119782	ENST00000271375.5	chr1_168244295_+	-3470.00	-3470.70	-3560.50
CAediting_119783	ENST00000271375.5	chr1_168244304_+	-3470.40	-3470.70	-3560.50
CAediting_119784	ENST00000271375.5	chr1_168244307_+	-3470.40	-3470.70	-3560.50
CAediting_119785	ENST00000271375.5	chr1_168244317_+	-3470.40	-3470.70	-3560.50
CAediting_119786	ENST00000271375.5	chr1_168244319_+	-3470.70	-3470.70	-3560.50
CAediting_119787	ENST00000271375.5	chr1_168244344_+	-3477.10	-3470.70	-3560.50
CAediting_119788	ENST00000271375.5	chr1_168244359_+	-3470.70	-3470.70	-3560.50
CAediting_119789	ENST00000271375.5	chr1_168244364_+	-3470.10	-3470.70	-3560.50
CAediting_119790	ENST00000271375.5	chr1_168244368_+	-3474.50	-3470.70	-3560.50
CAediting_119791	ENST00000271375.5	chr1_168244376_+	-3474.30	-3470.70	-3560.50
CAediting_119792	ENST00000271375.5	chr1_168244388_+	-3470.00	-3470.70	-3560.50
CAediting_119793	ENST00000271375.5	chr1_168244389_+	-3477.30	-3470.70	-3560.50
CAediting_119794	ENST00000271375.5	chr1_168244401_+	-3470.70	-3470.70	-3560.50
CAediting_119795	ENST00000271375.5	chr1_168244408_+	-3470.10	-3470.70	-3560.50
CAediting_119796	ENST00000271375.5	chr1_168244413_+	-3469.90	-3470.70	-3560.50
CAediting_119797	ENST00000271375.5	chr1_168244418_+	-3471.00	-3470.70	-3560.50
CAediting_119798	ENST00000271375.5	chr1_168244426_+	-3470.30	-3470.70	-3560.50
CAediting_119799	ENST00000271375.5	chr1_168244439_+	-3470.40	-3470.70	-3560.50
CAediting_119800	ENST00000271375.5	chr1_168244440_+	-3470.80	-3470.70	-3560.50
CAediting_119801	ENST00000271375.5	chr1_168244441_+	-3470.40	-3470.70	-3560.50
CAediting_119802	ENST00000271375.5	chr1_168247829_+	-3470.30	-3470.70	-3560.50
CAediting_119803	ENST00000271375.5	chr1_168247857_+	-3470.90	-3470.70	-3560.50
CAediting_119804	ENST00000271375.5	chr1_168247912_+	-3472.50	-3470.70	-3560.50
CAediting_119805	ENST00000271375.5	chr1_168247920_+	-3472.00	-3470.70	-3560.50
CAediting_119806	ENST00000271375.5	chr1_168247967_+	-3470.80	-3470.70	-3560.50
CAediting_119807	ENST00000271375.5	chr1_168247968_+	-3476.90	-3470.70	-3560.50
CAediting_119808	ENST00000271375.5	chr1_168249222_+	-3470.70	-3470.70	-3560.50
CAediting_119809	ENST00000271375.5	chr1_168249224_+	-3471.30	-3470.70	-3560.50
CAediting_119810	ENST00000271375.5	chr1_168249225_+	-3471.30	-3470.70	-3560.50
CAediting_119811	ENST00000271375.5	chr1_168249248_+	-3470.70	-3470.70	-3560.50
CAediting_119812	ENST00000271375.5	chr1_168249249_+	-3471.10	-3470.70	-3560.50
CAediting_119813	ENST00000271375.5	chr1_168249255_+	-3470.40	-3470.70	-3560.50
CAediting_119814	ENST00000271375.5	chr1_168249256_+	-3470.80	-3470.70	-3560.50
CAediting_119815	ENST00000271375.5	chr1_168249257_+	-3472.00	-3470.70	-3560.50
CAediting_119816	ENST00000271375.5	chr1_168249271_+	-3473.30	-3470.70	-3560.50
CAediting_119817	ENST00000271375.5	chr1_168249279_+	-3470.70	-3470.70	-3560.50
CAediting_119818	ENST00000271375.5	chr1_168249284_+	-3472.60	-3470.70	-3560.50
CAediting_119819	ENST00000271375.5	chr1_168249286_+	-3475.70	-3470.70	-3560.50
CAediting_119820	ENST00000271375.5	chr1_168249297_+	-3470.70	-3470.70	-3560.50
CAediting_119821	ENST00000271375.5	chr1_168249300_+	-3471.40	-3470.70	-3560.50
CAediting_119822	ENST00000271375.5	chr1_168249305_+	-3470.00	-3470.70	-3560.50
CAediting_119823	ENST00000271375.5	chr1_168249310_+	-3470.30	-3470.70	-3560.50
CAediting_119824	ENST00000271375.5	chr1_168249316_+	-3470.70	-3470.70	-3560.50
CAediting_119825	ENST00000271375.5	chr1_168249335_+	-3470.60	-3470.70	-3560.50
CAediting_119826	ENST00000271375.5	chr1_168249336_+	-3472.00	-3470.70	-3560.50
CAediting_119827	ENST00000271375.5	chr1_168249353_+	-3470.10	-3470.70	-3560.50
CAediting_119828	ENST00000271375.5	chr1_168249362_+	-3474.60	-3470.70	-3560.50
CAediting_119829	ENST00000271375.5	chr1_168249365_+	-3470.70	-3470.70	-3560.50
CAediting_119830	ENST00000271375.5	chr1_168249366_+	-3472.70	-3470.70	-3560.50
CAediting_119831	ENST00000271375.5	chr1_168249375_+	-3473.00	-3470.70	-3560.50
CAediting_119832	ENST00000271375.5	chr1_168249391_+	-3474.20	-3470.70	-3560.50
CAediting_119833	ENST00000271375.5	chr1_168249393_+	-3470.70	-3470.70	-3560.50
CAediting_119834	ENST00000271375.5	chr1_168249401_+	-3471.20	-3470.70	-3560.50
CAediting_119835	ENST00000271375.5	chr1_168249402_+	-3471.20	-3470.70	-3560.50
CAediting_119836	ENST00000271375.5	chr1_168249410_+	-3470.40	-3470.70	-3560.50
CAediting_119837	ENST00000271375.5	chr1_168249416_+	-3471.00	-3470.70	-3560.50
CAediting_119838	ENST00000271375.5	chr1_168249421_+	-3471.00	-3470.70	-3560.50
CAediting_119839	ENST00000271375.5	chr1_168249423_+	-3471.20	-3470.70	-3560.50
CAediting_119840	ENST00000271375.5	chr1_168249433_+	-3470.70	-3470.70	-3560.50
CAediting_119841	ENST00000271375.5	chr1_168249445_+	-3472.20	-3470.70	-3560.50
CAediting_119842	ENST00000271375.5	chr1_168249465_+	-3474.20	-3470.70	-3560.50
CAediting_119843	ENST00000271375.5	chr1_168249470_+	-3474.50	-3470.70	-3560.50
CAediting_119844	ENST00000271375.5	chr1_168249471_+	-3476.10	-3470.70	-3560.50
CAediting_119845	ENST00000271375.5	chr1_168249475_+	-3473.30	-3470.70	-3560.50
CAediting_119846	ENST00000271375.5	chr1_168249496_+	-3472.00	-3470.70	-3560.50
CAediting_119847	ENST00000271375.5	chr1_168249497_+	-3472.00	-3470.70	-3560.50
CAediting_119848	ENST00000271375.5	chr1_168249498_+	-3472.30	-3470.70	-3560.50
CAediting_119849	ENST00000271375.5	chr1_168249510_+	-3473.90	-3470.70	-3560.50
CAediting_119850	ENST00000271375.5	chr1_168249526_+	-3470.70	-3470.70	-3560.50
CAediting_119851	ENST00000271375.5	chr1_168249532_+	-3472.90	-3470.70	-3560.50
CAediting_119852	ENST00000271375.5	chr1_168251012_+	-3470.70	-3470.70	-3560.50
CAediting_119853	ENST00000271375.5	chr1_168251015_+	-3470.50	-3470.70	-3560.50
CAediting_119854	ENST00000271375.5	chr1_168251032_+	-3470.00	-3470.70	-3560.50
CAediting_119855	ENST00000271375.5	chr1_168251040_+	-3470.30	-3470.70	-3560.50
CAediting_119856	ENST00000271375.5	chr1_168251048_+	-3470.80	-3470.70	-3560.50
CAediting_119857	ENST00000271375.5	chr1_168251049_+	-3470.70	-3470.70	-3560.50
CAediting_119858	ENST00000271375.5	chr1_168251054_+	-3470.70	-3470.70	-3560.50
CAediting_119859	ENST00000271375.5	chr1_168251057_+	-3470.30	-3470.70	-3560.50
CAediting_119860	ENST00000271375.5	chr1_168251065_+	-3469.80	-3470.70	-3560.50
CAediting_119861	ENST00000271375.5	chr1_168251089_+	-3469.80	-3470.70	-3560.50
CAediting_119862	ENST00000271375.5	chr1_168251094_+	-3470.00	-3470.70	-3560.50
CAediting_119863	ENST00000271375.5	chr1_168251097_+	-3469.80	-3470.70	-3560.50
CAediting_119864	ENST00000271375.5	chr1_168251102_+	-3473.30	-3470.70	-3560.50
CAediting_119865	ENST00000271375.5	chr1_168251103_+	-3470.70	-3470.70	-3560.50
CAediting_119866	ENST00000271375.5	chr1_168251105_+	-3470.10	-3470.70	-3560.50
CAediting_119867	ENST00000271375.5	chr1_168251108_+	-3470.00	-3470.70	-3560.50
CAediting_119868	ENST00000271375.5	chr1_168251117_+	-3470.40	-3470.70	-3560.50
CAediting_119869	ENST00000271375.5	chr1_168251125_+	-3474.90	-3470.70	-3560.50
CAediting_119870	ENST00000271375.5	chr1_168251127_+	-3470.80	-3470.70	-3560.50
CAediting_119871	ENST00000271375.5	chr1_168251128_+	-3470.70	-3470.70	-3560.50
CAediting_119872	ENST00000271375.5	chr1_168251142_+	-3470.10	-3470.70	-3560.50
CAediting_119873	ENST00000271375.5	chr1_168251144_+	-3470.80	-3470.70	-3560.50
CAediting_119874	ENST00000271375.5	chr1_168251145_+	-3470.80	-3470.70	-3560.50
CAediting_119875	ENST00000271375.5	chr1_168251146_+	-3467.70	-3470.70	-3560.50
CAediting_119876	ENST00000271375.5	chr1_168251148_+	-3469.70	-3470.70	-3560.50
CAediting_119877	ENST00000271375.5	chr1_168251151_+	-3470.70	-3470.70	-3560.50
CAediting_119878	ENST00000271375.5	chr1_168251157_+	-3470.70	-3470.70	-3560.50
CAediting_119879	ENST00000271375.5	chr1_168251158_+	-3470.70	-3470.70	-3560.50
CAediting_119880	ENST00000271375.5	chr1_168251161_+	-3470.80	-3470.70	-3560.50
CAediting_119881	ENST00000271375.5	chr1_168251165_+	-3470.70	-3470.70	-3560.50
CAediting_119882	ENST00000271375.5	chr1_168251169_+	-3476.90	-3470.70	-3560.50
CAediting_119883	ENST00000271375.5	chr1_168251174_+	-3475.30	-3470.70	-3560.50
CAediting_119884	ENST00000271375.5	chr1_168251191_+	-3470.80	-3470.70	-3560.50
CAediting_119885	ENST00000271375.5	chr1_168251192_+	-3470.70	-3470.70	-3560.50
CAediting_119886	ENST00000271375.5	chr1_168251201_+	-3470.70	-3470.70	-3560.50
CAediting_119887	ENST00000271375.5	chr1_168251212_+	-3470.40	-3470.70	-3560.50
CAediting_119888	ENST00000271375.5	chr1_168251218_+	-3469.80	-3470.70	-3560.50
CAediting_119889	ENST00000271375.5	chr1_168251222_+	-3469.50	-3470.70	-3560.50
CAediting_119890	ENST00000271375.5	chr1_168251224_+	-3474.00	-3470.70	-3560.50
CAediting_119891	ENST00000271375.5	chr1_168251225_+	-3470.20	-3470.70	-3560.50
CAediting_119892	ENST00000271375.5	chr1_168251227_+	-3470.20	-3470.70	-3560.50
CAediting_119893	ENST00000271375.5	chr1_168251228_+	-3470.70	-3470.70	-3560.50
CAediting_119894	ENST00000271375.5	chr1_168251236_+	-3470.20	-3470.70	-3560.50
CAediting_119895	ENST00000271375.5	chr1_168251237_+	-3470.70	-3470.70	-3560.50
CAediting_119896	ENST00000271375.5	chr1_168251241_+	-3476.90	-3470.70	-3560.50
CAediting_119897	ENST00000271375.5	chr1_168251244_+	-3469.80	-3470.70	-3560.50
CAediting_119898	ENST00000271375.5	chr1_168251251_+	-3477.30	-3470.70	-3560.50
CAediting_119899	ENST00000271375.5	chr1_168251260_+	-3469.80	-3470.70	-3560.50
CAediting_119900	ENST00000271375.5	chr1_168251265_+	-3469.80	-3470.70	-3560.50
CAediting_119901	ENST00000271375.5	chr1_168251267_+	-3470.10	-3470.70	-3560.50
CAediting_119902	ENST00000271375.5	chr1_168251272_+	-3476.10	-3470.70	-3560.50
CAediting_119903	ENST00000271375.5	chr1_168251280_+	-3470.30	-3470.70	-3560.50
CAediting_119904	ENST00000271375.5	chr1_168251285_+	-3470.00	-3470.70	-3560.50
CAediting_119905	ENST00000271375.5	chr1_168251291_+	-3477.60	-3470.70	-3560.50
CAediting_119906	ENST00000271375.5	chr1_168251294_+	-3476.70	-3470.70	-3560.50
CAediting_119907	ENST00000271375.5	chr1_168251299_+	-3469.80	-3470.70	-3560.50
CAediting_119908	ENST00000271375.5	chr1_168251303_+	-3469.80	-3470.70	-3560.50
CAediting_119909	ENST00000271375.5	chr1_168251315_+	-3470.40	-3470.70	-3560.50
CAediting_119910	ENST00000271375.5	chr1_168251316_+	-3470.80	-3470.70	-3560.50
CAediting_119911	ENST00000271375.5	chr1_168251317_+	-3470.80	-3470.70	-3560.50
CAediting_119912	ENST00000271375.5	chr1_168251318_+	-3470.80	-3470.70	-3560.50
CAediting_119913	ENST00000271375.5	chr1_168251322_+	-3470.80	-3470.70	-3560.50
CAediting_119914	ENST00000271375.5	chr1_168251329_+	-3470.80	-3470.70	-3560.50

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Relation with ADAR for SFT2D2

Correlation between ADAR gene expression and RNA editing frequency

Cancer	CAeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
BRCA	CAediting_119814	chr1_168249256_+	0.000223322515888073	0.164847655465823	.	.	.	.
CESC	CAediting_119814	chr1_168249256_+	0.00216666216851951	0.260781853437729	.	.	.	.
OV	CAediting_119822	chr1_168249305_+	0.0367595867450522	0.122914984473792	.	.	.	.
BLCA	CAediting_119856	chr1_168251048_+	0.0223081053456679	0.206769071593116	.	.	.	.
BRCA	CAediting_119856	chr1_168251048_+	1.08427292870926e-09	0.26203393721563	.	.	.	.
LIHC	CAediting_119856	chr1_168251048_+	0.0323459499245269	0.150280139775674	.	.	.	.
LUAD	CAediting_119856	chr1_168251048_+	1.10216135092966e-07	0.344208757809786	.	.	.	.
STAD	CAediting_119856	chr1_168251048_+	0.00516562279886215	0.190087166883126	.	.	.	.
SKCM	CAediting_119856	chr1_168251048_+	0.000361168866525837	0.331195717467366	.	.	.	.
SARC	CAediting_119856	chr1_168251048_+	0.000866159256388826	0.352707576699012	.	.	.	.
TGCT	CAediting_119856	chr1_168251048_+	0.0236922502925819	0.294241189319828	.	.	.	.
STAD	CAediting_119857	chr1_168251049_+	.	.	.	.	0.00636663576106605	0.263419552809812
STAD	CAediting_119861	chr1_168251089_+	.	.	.	.	0.00316292360840102	0.334296298516853
BRCA	CAediting_119862	chr1_168251094_+	0.0381688784855029	0.0923722448375143	.	.	.	.
CESC	CAediting_119862	chr1_168251094_+	0.0343223415742271	0.161952699517867	.	.	.	.
PRAD	CAediting_119862	chr1_168251094_+	0.0488452123160804	0.17518180127045	0.0162568859798177	0.21289472720569	.	.
OV	CAediting_119864	chr1_168251102_+	0.0235719412337971	0.125187904266927	.	.	.	.
ESCA	CAediting_119865	chr1_168251103_+	.	.	0.0115815754556686	0.274266737572751	.	.
ESCA	CAediting_119869	chr1_168251125_+	0.0454089275790662	0.168793161557755	.	.	.	.
OV	CAediting_119869	chr1_168251125_+	0.0341019105560415	0.123000451131522	.	.	.	.
PRAD	CAediting_119881	chr1_168251165_+	0.037484460690651	0.156078825186071	.	.	.	.
HNSC	CAediting_119881	chr1_168251165_+	.	.	0.00153452260490092	0.194410645735203	.	.
STAD	CAediting_119881	chr1_168251165_+	0.00224205456822471	0.200990456748801	.	.	.	.
BLCA	CAediting_119882	chr1_168251169_+	0.0308272720353791	0.119075153539385	.	.	.	.
BRCA	CAediting_119882	chr1_168251169_+	0.00151108389758624	0.098683394092211	.	.	.	.
COAD	CAediting_119882	chr1_168251169_+	0.0468098980068089	0.101918688659321	.	.	.	.
HNSC	CAediting_119882	chr1_168251169_+	.	.	0.000281465080300047	0.166791103027329	.	.
STAD	CAediting_119882	chr1_168251169_+	0.0274650402157655	0.117864432840197	.	.	.	.
OV	CAediting_119882	chr1_168251169_+	0.0238129763140326	0.117015719100459	.	.	.	.
CESC	CAediting_119885	chr1_168251192_+	0.0130942237063499	0.271331679024527	.	.	.	.
LUAD	CAediting_119885	chr1_168251192_+	1.12833221618718e-06	0.40465686469796	.	.	.	.
PRAD	CAediting_119885	chr1_168251192_+	0.0166842947585665	0.23097210108833	.	.	.	.
LGG	CAediting_119891	chr1_168251225_+	.	.	0.00540110434296385	0.287822871124002	.	.
STAD	CAediting_119895	chr1_168251237_+	0.00852955657827795	0.150128714525437	.	.	.	.
LGG	CAediting_119896	chr1_168251241_+	.	.	0.0394630131558387	0.238354881534951	.	.
BRCA	CAediting_119896	chr1_168251241_+	.	.	.	.	0.0205036999576932	0.19361938680219
BLCA	CAediting_119898	chr1_168251251_+	0.0209341660499766	0.141272230325245	.	.	.	.
BRCA	CAediting_119898	chr1_168251251_+	1.03136638875056e-05	0.145388881387197	.	.	.	.
LUAD	CAediting_119898	chr1_168251251_+	0.00148139569403322	0.16082129384439	.	.	.	.
LUSC	CAediting_119898	chr1_168251251_+	0.0186776393321144	0.114587642877888	.	.	.	.
GBM	CAediting_119898	chr1_168251251_+	1.12248649407838e-06	0.368421538052473	.	.	.	.
HNSC	CAediting_119898	chr1_168251251_+	.	.	0.00493124417873364	0.142280250331752	.	.
STAD	CAediting_119898	chr1_168251251_+	3.95850033860338e-06	0.247576427556357	.	.	.	.
ESCA	CAediting_119898	chr1_168251251_+	0.00705390887961328	0.212234120422281	.	.	.	.
OV	CAediting_119898	chr1_168251251_+	4.126599728395e-06	0.238366114270141	.	.	.	.
MESO	CAediting_119898	chr1_168251251_+	.	.	0.000478054217573827	0.421064968346898	.	.

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Relation with cancer stages for SFT2D2

Correlation between Cancer stages and RNA editing frequency

Cancer	Stage_type	CAeditomID	position	P-val	Coeff.
BLCA	pathologic_stage	CAediting_119882	chr1_168251169_+	0.0198034052774412	0.128611845431337
BRCA	pathologic_stage	CAediting_119796	chr1_168244413_+	0.0499903333904977	0.218539464647523
COAD	pathologic_stage	CAediting_119856	chr1_168251048_+	0.00044242106534774	-0.379212707856759
COAD	pathologic_stage	CAediting_119895	chr1_168251237_+	0.0282976622344357	-0.13038839123951
ESCA	pathologic_stage	CAediting_119822	chr1_168249305_+	0.0327466502506134	-0.180587962253626
ESCA	pathologic_stage	CAediting_119882	chr1_168251169_+	0.024716369069069	-0.187778021194776
HNSC	clinical_stage	CAediting_119894	chr1_168251236_+	0.00202086053863124	0.403915319066366
HNSC	pathologic_stage	CAediting_119862	chr1_168251094_+	0.0373989611888301	0.132254921661436
HNSC	pathologic_stage	CAediting_119894	chr1_168251236_+	0.00228082978242141	0.417852194463883
HNSC	pathologic_stage	CAediting_119898	chr1_168251251_+	0.0341955774497582	0.11506353417472
KICH	pathologic_stage	CAediting_119882	chr1_168251169_+	0.0194968278087935	0.311366198405401
KIRC	pathologic_stage	CAediting_119814	chr1_168249256_+	0.0319580353906497	0.214684976183572
KIRC	pathologic_stage	CAediting_119862	chr1_168251094_+	0.0306359861465315	0.134888119926472
KIRC	pathologic_stage	CAediting_119882	chr1_168251169_+	0.00763912039789035	0.11917233590129
KIRC	pathologic_stage	CAediting_119898	chr1_168251251_+	0.00980727777238812	0.132334916055184
KIRP	pathologic_stage	CAediting_119882	chr1_168251169_+	0.0197911994417087	0.155967632388865
LIHC	pathologic_stage	CAediting_119891	chr1_168251225_+	0.0416939052559309	-0.213968364845193
LUAD	pathologic_stage	CAediting_119862	chr1_168251094_+	0.0321646670710727	0.141016686009968
LUAD	pathologic_stage	CAediting_119864	chr1_168251102_+	0.00781227218806322	0.288365906241602
LUSC	pathologic_stage	CAediting_119883	chr1_168251174_+	0.0123442084030629	-0.341440616682547
LUSC	pathologic_stage	CAediting_119895	chr1_168251237_+	0.00916434391456119	0.15716483590028
LUSC	pathologic_stage	CAediting_119898	chr1_168251251_+	0.0162803693700128	0.117598795175318
OV	clinical_stage	CAediting_119857	chr1_168251049_+	0.00871520654050451	0.33580064700173
OV	clinical_stage	CAediting_119891	chr1_168251225_+	0.0180630325540923	-0.156475443735577
STAD	pathologic_stage	CAediting_119856	chr1_168251048_+	0.0125541006662494	-0.174496446226951
STAD	pathologic_stage	CAediting_119857	chr1_168251049_+	0.0230776088768901	-0.221626711721995
STAD	pathologic_stage	CAediting_119896	chr1_168251241_+	0.0122738451370556	-0.285961872895354
THCA	pathologic_stage	CAediting_119895	chr1_168251237_+	0.036825025839011	0.201171151102818

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Relation with survival for SFT2D2

Correlation between RNA editing and survival

Cancer	CAeditomID	position	KMpvalue	Coxpvalue	CoxHR
HNSC	CAediting_119861	chr1_168251089_+	0.0271922454041935	0.0172252	2680930
HNSC	CAediting_119881	chr1_168251165_+	0.0432847797400998	0.0218273	45.2006
KIRC	CAediting_119814	chr1_168249256_+	0.0447237582007582	0.0466128	813.811
OV	CAediting_119826	chr1_168249336_+	0.00289636043905994	0.0111069	0.000104243
SARC	CAediting_119895	chr1_168251237_+	0.0453344954432735	0.0332348	2389.21

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RelatedDrugs for SFT2D2

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for SFT2D2

Diseases associated with this gene.
(DisGeNet 7.0)

Gene

Disease ID

Disease name

# pubmeds

Source

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene