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Editing gene: ZNF773 (CAeditome ID:374928)

Gene summary for ZNF773

Gene summary

Gene information	Gene symbol	ZNF773
	Gene ID	374928
	Gene name	zinc finger protein 773
	Synonyms	ZNF419B
	Cytomap	19q13.43
	Type of gene	protein-coding
	Description	zinc finger protein 773zinc finger protein 419B
	Modification date	20210518
	UniProtAcc	Q6PK81
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene

GO ID

GO term

PubMed ID

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RNA A-to-I events for ZNF773

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000152439.11

RNA A-to-I editing events in Cancer.

CAediting_1393287(57505891, +), CAediting_1393288(57507231, +), CAediting_1393289(57507249, +), CAediting_1393290(57507257, +), CAediting_1393291(57507712, +), CAediting_1393292(57507743, +), CAediting_1393293(57507755, +), CAediting_1393294(57507757, +), CAediting_1393295(57507758, +), CAediting_1393296(57507763, +), CAediting_1393297(57507773, +), CAediting_1393298(57507774, +), CAediting_1393299(57507787, +), CAediting_1393300(57507789, +), CAediting_1393301(57507795, +), CAediting_1393302(57507796, +), CAediting_1393303(57507797, +), CAediting_1393304(57507812, +), CAediting_1393305(57507817, +), CAediting_1393306(57507821, +), CAediting_1393307(57507822, +), CAediting_1393308(57507823, +), CAediting_1393309(57507852, +), CAediting_1393310(57507858, +), CAediting_1393311(57507862, +), CAediting_1393312(57507866, +), CAediting_1393313(57507869, +), CAediting_1393314(57507879, +), CAediting_1393315(57507881, +), CAediting_1393316(57507882, +), CAediting_1393317(57507884, +), CAediting_1393318(57507894, +), CAediting_1393319(57507898, +), CAediting_1393320(57507901, +), CAediting_1393321(57507905, +), CAediting_1393322(57507918, +), CAediting_1393323(57507925, +), CAediting_1393324(57507928, +), CAediting_1393325(57507943, +), CAediting_1393326(57507994, +), CAediting_1393327(57508010, +), CAediting_1393328(57508014, +), CAediting_1393329(57508020, +), CAediting_1393330(57508026, +), CAediting_1393331(57508030, +), CAediting_1393332(57508047, +), CAediting_1393333(57508061, +), CAediting_1393334(57508062, +), CAediting_1393335(57508069, +), CAediting_1393336(57508086, +), CAediting_1393337(57508091, +), CAediting_1393338(57508096, +), CAediting_1393339(57508111, +),

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RNA editing positional annotations for ZNF773 using Annovar

Protein coding RNA editing(s).

CAeditome ID	Position	Variant type	ENST	NTchange	AAchange	SIFT_score	Polyphen2_HVAR_score	PROVEAN_pred
CAediting_1393289	chr19_57507249_+	nonsynonymous SNV	ENST00000282292.7	c.A1154G	p.K385R	T	D	N
CAediting_1393289	chr19_57507249_+	nonsynonymous SNV	ENST00000598770.4	c.A1151G	p.K384R	T	D	N

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_1393287	chr19_57505891_+	ncRNA_intronic
CAediting_1393288	chr19_57507231_+	exonic
CAediting_1393289	chr19_57507249_+	exonic
CAediting_1393290	chr19_57507257_+	exonic
CAediting_1393291	chr19_57507712_+	UTR3
CAediting_1393292	chr19_57507743_+	UTR3
CAediting_1393293	chr19_57507755_+	UTR3
CAediting_1393294	chr19_57507757_+	UTR3
CAediting_1393295	chr19_57507758_+	UTR3
CAediting_1393296	chr19_57507763_+	UTR3
CAediting_1393297	chr19_57507773_+	UTR3
CAediting_1393298	chr19_57507774_+	UTR3
CAediting_1393299	chr19_57507787_+	UTR3
CAediting_1393300	chr19_57507789_+	UTR3
CAediting_1393301	chr19_57507795_+	UTR3
CAediting_1393302	chr19_57507796_+	UTR3
CAediting_1393303	chr19_57507797_+	UTR3
CAediting_1393304	chr19_57507812_+	UTR3
CAediting_1393305	chr19_57507817_+	UTR3
CAediting_1393306	chr19_57507821_+	UTR3
CAediting_1393307	chr19_57507822_+	UTR3
CAediting_1393308	chr19_57507823_+	UTR3
CAediting_1393309	chr19_57507852_+	UTR3
CAediting_1393310	chr19_57507858_+	UTR3
CAediting_1393311	chr19_57507862_+	UTR3
CAediting_1393312	chr19_57507866_+	UTR3
CAediting_1393313	chr19_57507869_+	UTR3
CAediting_1393314	chr19_57507879_+	UTR3
CAediting_1393315	chr19_57507881_+	UTR3
CAediting_1393316	chr19_57507882_+	UTR3
CAediting_1393317	chr19_57507884_+	UTR3
CAediting_1393318	chr19_57507894_+	UTR3
CAediting_1393319	chr19_57507898_+	UTR3
CAediting_1393320	chr19_57507901_+	UTR3
CAediting_1393321	chr19_57507905_+	UTR3
CAediting_1393322	chr19_57507918_+	UTR3
CAediting_1393323	chr19_57507925_+	UTR3
CAediting_1393324	chr19_57507928_+	UTR3
CAediting_1393325	chr19_57507943_+	UTR3
CAediting_1393326	chr19_57507994_+	UTR3
CAediting_1393327	chr19_57508010_+	UTR3
CAediting_1393328	chr19_57508014_+	UTR3
CAediting_1393329	chr19_57508020_+	UTR3
CAediting_1393330	chr19_57508026_+	UTR3
CAediting_1393331	chr19_57508030_+	UTR3
CAediting_1393332	chr19_57508047_+	UTR3
CAediting_1393333	chr19_57508061_+	UTR3
CAediting_1393334	chr19_57508062_+	UTR3
CAediting_1393335	chr19_57508069_+	UTR3
CAediting_1393336	chr19_57508086_+	UTR3
CAediting_1393337	chr19_57508091_+	UTR3
CAediting_1393338	chr19_57508096_+	UTR3
CAediting_1393339	chr19_57508111_+	UTR3

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_1393287	chr19_57505891_+	SINE	Alu	AluY
CAediting_1393291	chr19_57507712_+	SINE	Alu	AluY
CAediting_1393292	chr19_57507743_+	SINE	Alu	AluY
CAediting_1393293	chr19_57507755_+	SINE	Alu	AluY
CAediting_1393294	chr19_57507757_+	SINE	Alu	AluY
CAediting_1393295	chr19_57507758_+	SINE	Alu	AluY
CAediting_1393296	chr19_57507763_+	SINE	Alu	AluY
CAediting_1393297	chr19_57507773_+	SINE	Alu	AluY
CAediting_1393298	chr19_57507774_+	SINE	Alu	AluY
CAediting_1393299	chr19_57507787_+	SINE	Alu	AluY
CAediting_1393300	chr19_57507789_+	SINE	Alu	AluY
CAediting_1393301	chr19_57507795_+	SINE	Alu	AluY
CAediting_1393302	chr19_57507796_+	SINE	Alu	AluY
CAediting_1393303	chr19_57507797_+	SINE	Alu	AluY
CAediting_1393304	chr19_57507812_+	SINE	Alu	AluY
CAediting_1393305	chr19_57507817_+	SINE	Alu	AluY
CAediting_1393306	chr19_57507821_+	SINE	Alu	AluY
CAediting_1393307	chr19_57507822_+	SINE	Alu	AluY
CAediting_1393308	chr19_57507823_+	SINE	Alu	AluY
CAediting_1393309	chr19_57507852_+	SINE	Alu	AluY
CAediting_1393310	chr19_57507858_+	SINE	Alu	AluY
CAediting_1393311	chr19_57507862_+	SINE	Alu	AluY
CAediting_1393312	chr19_57507866_+	SINE	Alu	AluY
CAediting_1393313	chr19_57507869_+	SINE	Alu	AluY
CAediting_1393314	chr19_57507879_+	SINE	Alu	AluY
CAediting_1393315	chr19_57507881_+	SINE	Alu	AluY
CAediting_1393316	chr19_57507882_+	SINE	Alu	AluY
CAediting_1393317	chr19_57507884_+	SINE	Alu	AluY
CAediting_1393318	chr19_57507894_+	SINE	Alu	AluY
CAediting_1393319	chr19_57507898_+	SINE	Alu	AluY
CAediting_1393320	chr19_57507901_+	SINE	Alu	AluY
CAediting_1393321	chr19_57507905_+	SINE	Alu	AluY
CAediting_1393322	chr19_57507918_+	SINE	Alu	AluY
CAediting_1393323	chr19_57507925_+	SINE	Alu	AluY
CAediting_1393324	chr19_57507928_+	SINE	Alu	AluY
CAediting_1393325	chr19_57507943_+	SINE	Alu	AluY
CAediting_1393326	chr19_57507994_+	SINE	Alu	AluSc8
CAediting_1393327	chr19_57508010_+	SINE	Alu	AluSc8
CAediting_1393328	chr19_57508014_+	SINE	Alu	AluSc8
CAediting_1393329	chr19_57508020_+	SINE	Alu	AluSc8
CAediting_1393330	chr19_57508026_+	SINE	Alu	AluSc8
CAediting_1393331	chr19_57508030_+	SINE	Alu	AluSc8
CAediting_1393332	chr19_57508047_+	SINE	Alu	AluSc8
CAediting_1393333	chr19_57508061_+	SINE	Alu	AluSc8
CAediting_1393334	chr19_57508062_+	SINE	Alu	AluSc8
CAediting_1393335	chr19_57508069_+	SINE	Alu	AluSc8
CAediting_1393336	chr19_57508086_+	SINE	Alu	AluSc8
CAediting_1393337	chr19_57508091_+	SINE	Alu	AluSc8
CAediting_1393338	chr19_57508096_+	SINE	Alu	AluSc8
CAediting_1393339	chr19_57508111_+	SINE	Alu	AluSc8

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RNA A-to-I editing events in the alternative splicing sites for ZNF773

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000152439.11.ZNF773.

Correlation between RNA A-to-I editing and PSI for ENSG00000152439.11.ZNF773.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for ZNF773

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for ZNF773

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for ZNF773

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1393291	chr19_57507712_+	ENSG00000152439.11	ENST00000598770	hsa-miR-3186-5p	57507708	57507714	7mer-m8	57507690	57507715	158.00	-32.18
CAediting_1393294	chr19_57507757_+	ENSG00000152439.11	ENST00000598770	hsa-miR-6790-3p	57507755	57507762	8mer-1a	57507742	57507762	150.00	-21.47
CAediting_1393297	chr19_57507773_+	ENSG00000152439.11	ENST00000598770	hsa-miR-6843-3p	57507770	57507776	7mer-m8	57507756	57507777	154.00	-19.11
CAediting_1393297	chr19_57507773_+	ENSG00000152439.11	ENST00000598770	hsa-miR-6848-3p	57507770	57507776	7mer-m8	57507758	57507777	145.00	-17.88
CAediting_1393309	chr19_57507852_+	ENSG00000152439.11	ENST00000598770	hsa-miR-140-3p	57507847	57507853	7mer-m8	57507834	57507854	155.00	-25.24
CAediting_1393311	chr19_57507862_+	ENSG00000152439.11	ENST00000598770	hsa-miR-1207-3p	57507855	57507861	7mer-m8	57507844	57507862	145.00	-13.53
CAediting_1393311	chr19_57507862_+	ENSG00000152439.11	ENST00000598770	hsa-miR-646	57507857	57507863	7mer-m8	57507845	57507864	148.00	-21.05
CAediting_1393313	chr19_57507869_+	ENSG00000152439.11	ENST00000598770	hsa-miR-125a-5p	57507862	57507868	7mer-m8	57507846	57507869	142.00	-17.93
CAediting_1393313	chr19_57507869_+	ENSG00000152439.11	ENST00000598770	hsa-miR-125b-5p	57507862	57507868	7mer-m8	57507848	57507869	141.00	-16.47
CAediting_1393313	chr19_57507869_+	ENSG00000152439.11	ENST00000598770	hsa-miR-125b-5p	57507862	57507868	7mer-m8	57507848	57507869	141.00	-16.47
CAediting_1393313	chr19_57507869_+	ENSG00000152439.11	ENST00000598770	hsa-miR-3943	57507866	57507872	7mer-m8	57507853	57507873	150.00	-22.11
CAediting_1393313	chr19_57507869_+	ENSG00000152439.11	ENST00000598770	hsa-miR-4313	57507865	57507871	7mer-m8	57507853	57507872	146.00	-21.10
CAediting_1393313	chr19_57507869_+	ENSG00000152439.11	ENST00000598770	hsa-miR-4319	57507862	57507868	7mer-m8	57507853	57507869	142.00	-17.68
CAediting_1393321	chr19_57507905_+	ENSG00000152439.11	ENST00000598770	hsa-miR-1281	57507898	57507904	7mer-m8	57507889	57507905	145.00	-17.98
CAediting_1393292	chr19_57507743_+	ENSG00000152439.11	ENST00000598770	hsa-miR-4485-5p	57507741	57507746	6mer	57507735	57507751	141.00	-26.09
CAediting_1393292	chr19_57507743_+	ENSG00000152439.11	ENST00000598770	hsa-miR-7108-3p	57507742	57507747	6mer	57507733	57507752	141.00	-27.45
CAediting_1393295	chr19_57507758_+	ENSG00000152439.11	ENST00000598770	hsa-miR-10a-5p	57507754	57507760	7mer-m8	57507740	57507761	161.00	-26.27
CAediting_1393295	chr19_57507758_+	ENSG00000152439.11	ENST00000598770	hsa-miR-10b-5p	57507754	57507760	7mer-m8	57507740	57507761	153.00	-21.48
CAediting_1393295	chr19_57507758_+	ENSG00000152439.11	ENST00000598770	hsa-miR-146b-3p	57507753	57507759	7mer-m8	57507741	57507760	147.00	-20.84
CAediting_1393295	chr19_57507758_+	ENSG00000152439.11	ENST00000598770	hsa-miR-1914-5p	57507753	57507758	6mer	57507738	57507759	144.00	-30.78
CAediting_1393295	chr19_57507758_+	ENSG00000152439.11	ENST00000598770	hsa-miR-4679	57507751	57507757	7mer-m8	57507737	57507758	140.00	-15.86
CAediting_1393295	chr19_57507758_+	ENSG00000152439.11	ENST00000598770	hsa-miR-4679	57507751	57507757	7mer-m8	57507737	57507758	140.00	-15.86
CAediting_1393295	chr19_57507758_+	ENSG00000152439.11	ENST00000598770	hsa-miR-4725-5p	57507755	57507762	8mer-1a	57507742	57507762	150.00	-20.93
CAediting_1393295	chr19_57507758_+	ENSG00000152439.11	ENST00000598770	hsa-miR-504-5p	57507755	57507762	8mer-1a	57507739	57507762	158.00	-22.55
CAediting_1393298	chr19_57507774_+	ENSG00000152439.11	ENST00000598770	hsa-miR-135a-5p	57507771	57507777	7mer-m8	57507756	57507778	150.00	-13.55
CAediting_1393298	chr19_57507774_+	ENSG00000152439.11	ENST00000598770	hsa-miR-135a-5p	57507771	57507777	7mer-m8	57507756	57507778	150.00	-13.55
CAediting_1393298	chr19_57507774_+	ENSG00000152439.11	ENST00000598770	hsa-miR-135b-5p	57507771	57507777	7mer-m8	57507756	57507778	150.00	-13.55
CAediting_1393301	chr19_57507795_+	ENSG00000152439.11	ENST00000598770	hsa-miR-218-1-3p	57507793	57507799	7mer-m8	57507779	57507800	146.00	-16.23
CAediting_1393302	chr19_57507796_+	ENSG00000152439.11	ENST00000598770	hsa-miR-6843-3p	57507793	57507799	7mer-m8	57507780	57507800	143.00	-12.99
CAediting_1393302	chr19_57507796_+	ENSG00000152439.11	ENST00000598770	hsa-miR-6848-3p	57507793	57507799	7mer-m8	57507781	57507800	146.00	-17.85
CAediting_1393303	chr19_57507797_+	ENSG00000152439.11	ENST00000598770	hsa-miR-4474-3p	57507795	57507801	7mer-m8	57507783	57507802	147.00	-14.68
CAediting_1393304	chr19_57507812_+	ENSG00000152439.11	ENST00000598770	hsa-miR-325	57507805	57507812	8mer-1a	57507790	57507812	145.00	-10.81
CAediting_1393305	chr19_57507817_+	ENSG00000152439.11	ENST00000598770	hsa-miR-3680-3p	57507814	57507821	8mer-1a	57507799	57507821	140.00	-13.99
CAediting_1393305	chr19_57507817_+	ENSG00000152439.11	ENST00000598770	hsa-miR-3680-3p	57507814	57507821	8mer-1a	57507799	57507821	140.00	-13.99
CAediting_1393306	chr19_57507821_+	ENSG00000152439.11	ENST00000598770	hsa-miR-578	57507816	57507822	7mer-m8	57507803	57507823	148.00	-9.14
CAediting_1393306	chr19_57507821_+	ENSG00000152439.11	ENST00000598770	hsa-miR-643	57507814	57507821	8mer-1a	57507799	57507821	147.00	-12.35
CAediting_1393307	chr19_57507822_+	ENSG00000152439.11	ENST00000598770	hsa-miR-6844	57507816	57507822	7mer-m8	57507802	57507823	155.00	-7.49
CAediting_1393315	chr19_57507881_+	ENSG00000152439.11	ENST00000598770	hsa-miR-6747-3p	57507874	57507881	8mer-1a	57507859	57507881	149.00	-23.42
CAediting_1393317	chr19_57507884_+	ENSG00000152439.11	ENST00000598770	hsa-miR-6868-3p	57507878	57507884	7mer-m8	57507866	57507885	151.00	-17.24
CAediting_1393318	chr19_57507894_+	ENSG00000152439.11	ENST00000598770	hsa-miR-645	57507892	57507898	7mer-m8	57507881	57507899	149.00	-15.52
CAediting_1393318	chr19_57507894_+	ENSG00000152439.11	ENST00000598770	hsa-miR-6847-3p	57507888	57507894	7mer-m8	57507876	57507895	149.00	-19.02
CAediting_1393319	chr19_57507898_+	ENSG00000152439.11	ENST00000598770	hsa-miR-4726-3p	57507893	57507900	8mer-1a	57507879	57507900	150.00	-23.20
CAediting_1393322	chr19_57507918_+	ENSG00000152439.11	ENST00000598770	hsa-miR-4690-3p	57507915	57507922	8mer-1a	57507903	57507922	153.00	-25.20
CAediting_1393322	chr19_57507918_+	ENSG00000152439.11	ENST00000598770	hsa-miR-5685	57507915	57507922	8mer-1a	57507902	57507922	145.00	-18.28
CAediting_1393323	chr19_57507925_+	ENSG00000152439.11	ENST00000598770	hsa-miR-6790-3p	57507921	57507927	7mer-1a	57507908	57507927	141.00	-20.11
CAediting_1393324	chr19_57507928_+	ENSG00000152439.11	ENST00000598770	hsa-miR-4634	57507925	57507932	8mer-1a	57507912	57507932	146.00	-22.72
CAediting_1393314	chr19_57507879_+	ENSG00000152439.11	ENST00000598770	hsa-miR-718	57507875	57507881	7mer-m8	57507861	57507882	148.00	-24.87
CAediting_1393316	chr19_57507882_+	ENSG00000152439.11	ENST00000598770	hsa-miR-3059-5p	57507878	57507884	7mer-m8	57507859	57507885	150.00	-22.17
CAediting_1393316	chr19_57507882_+	ENSG00000152439.11	ENST00000598770	hsa-miR-6728-3p	57507876	57507881	6mer	57507862	57507882	141.00	-23.69
CAediting_1393316	chr19_57507882_+	ENSG00000152439.11	ENST00000598770	hsa-miR-6780a-3p	57507877	57507884	8mer-1a	57507863	57507884	158.00	-22.16
CAediting_1393320	chr19_57507901_+	ENSG00000152439.11	ENST00000598770	hsa-miR-1913	57507899	57507906	8mer-1a	57507885	57507906	160.00	-28.86
CAediting_1393320	chr19_57507901_+	ENSG00000152439.11	ENST00000598770	hsa-miR-4313	57507897	57507904	8mer-1a	57507885	57507904	147.00	-20.44

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1393312	chr19_57507866_+	ENSG00000152439.11	ENST00000598770	hsa-miR-1200	57507862	57507868	7mer-m8	57507848	57507869	141	-18.61
CAediting_1393313	chr19_57507869_+	ENSG00000152439.11	ENST00000598770	hsa-miR-1200	57507862	57507868	7mer-m8	57507848	57507869	141	-18.61
CAediting_1393318	chr19_57507894_+	ENSG00000152439.11	ENST00000598770	hsa-miR-1206	57507888	57507894	7mer-m8	57507875	57507895	149	-12.22
CAediting_1393297	chr19_57507773_+	ENSG00000152439.11	ENST00000598770	hsa-miR-29b-2-5p	57507770	57507776	7mer-m8	57507755	57507777	151	-15.76
CAediting_1393298	chr19_57507774_+	ENSG00000152439.11	ENST00000598770	hsa-miR-29b-2-5p	57507770	57507776	7mer-m8	57507755	57507777	151	-15.76
CAediting_1393301	chr19_57507795_+	ENSG00000152439.11	ENST00000598770	hsa-miR-29b-2-5p	57507793	57507799	7mer-m8	57507778	57507800	150	-15.02
CAediting_1393302	chr19_57507796_+	ENSG00000152439.11	ENST00000598770	hsa-miR-29b-2-5p	57507793	57507799	7mer-m8	57507778	57507800	150	-15.02
CAediting_1393303	chr19_57507797_+	ENSG00000152439.11	ENST00000598770	hsa-miR-29b-2-5p	57507793	57507799	7mer-m8	57507778	57507800	150	-15.02
CAediting_1393321	chr19_57507905_+	ENSG00000152439.11	ENST00000598770	hsa-miR-3664-5p	57507903	57507908	6mer	57507885	57507909	145	-23.76
CAediting_1393296	chr19_57507763_+	ENSG00000152439.11	ENST00000598770	hsa-miR-378a-5p	57507759	57507765	7mer-m8	57507744	57507766	148	-19.2
CAediting_1393291	chr19_57507712_+	ENSG00000152439.11	ENST00000598770	hsa-miR-3934-5p	57507709	57507715	7mer-m8	57507694	57507716	147	-18.71
CAediting_1393300	chr19_57507789_+	ENSG00000152439.11	ENST00000598770	hsa-miR-4289	57507787	57507794	8mer-1a	57507776	57507794	140	-15.61
CAediting_1393315	chr19_57507881_+	ENSG00000152439.11	ENST00000598770	hsa-miR-4659a-3p	57507878	57507884	7mer-m8	57507866	57507885	143	-10.85
CAediting_1393316	chr19_57507882_+	ENSG00000152439.11	ENST00000598770	hsa-miR-4659a-3p	57507878	57507884	7mer-m8	57507866	57507885	143	-10.85
CAediting_1393317	chr19_57507884_+	ENSG00000152439.11	ENST00000598770	hsa-miR-4659a-3p	57507878	57507884	7mer-m8	57507866	57507885	143	-10.85
CAediting_1393315	chr19_57507881_+	ENSG00000152439.11	ENST00000598770	hsa-miR-4659b-3p	57507878	57507884	7mer-m8	57507866	57507885	143	-12.05
CAediting_1393316	chr19_57507882_+	ENSG00000152439.11	ENST00000598770	hsa-miR-4659b-3p	57507878	57507884	7mer-m8	57507866	57507885	143	-12.05
CAediting_1393317	chr19_57507884_+	ENSG00000152439.11	ENST00000598770	hsa-miR-4659b-3p	57507878	57507884	7mer-m8	57507866	57507885	143	-12.05
CAediting_1393323	chr19_57507925_+	ENSG00000152439.11	ENST00000598770	hsa-miR-4695-3p	57507920	57507927	8mer-1a	57507904	57507927	150	-23.59
CAediting_1393321	chr19_57507905_+	ENSG00000152439.11	ENST00000598770	hsa-miR-4714-5p	57507903	57507908	6mer	57507889	57507909	141	-25.18
CAediting_1393314	chr19_57507879_+	ENSG00000152439.11	ENST00000598770	hsa-miR-5001-3p	57507874	57507881	8mer-1a	57507860	57507881	153	-23.55
CAediting_1393315	chr19_57507881_+	ENSG00000152439.11	ENST00000598770	hsa-miR-5001-3p	57507874	57507881	8mer-1a	57507860	57507881	153	-23.55
CAediting_1393321	chr19_57507905_+	ENSG00000152439.11	ENST00000598770	hsa-miR-5001-3p	57507900	57507906	7mer-m8	57507883	57507907	154	-21.76
CAediting_1393325	chr19_57507943_+	ENSG00000152439.11	ENST00000598770	hsa-miR-516b-5p	57507938	57507944	7mer-m8	57507924	57507945	145	-15.32
CAediting_1393325	chr19_57507943_+	ENSG00000152439.11	ENST00000598770	hsa-miR-516b-5p	57507938	57507944	7mer-m8	57507924	57507945	145	-15.32
CAediting_1393291	chr19_57507712_+	ENSG00000152439.11	ENST00000598770	hsa-miR-552-3p	57507710	57507716	7mer-m8	57507698	57507717	146	-16.38
CAediting_1393319	chr19_57507898_+	ENSG00000152439.11	ENST00000598770	hsa-miR-5571-3p	57507894	57507900	7mer-m8	57507883	57507901	140	-12.7
CAediting_1393320	chr19_57507901_+	ENSG00000152439.11	ENST00000598770	hsa-miR-5571-3p	57507894	57507900	7mer-m8	57507883	57507901	140	-12.7
CAediting_1393297	chr19_57507773_+	ENSG00000152439.11	ENST00000598770	hsa-miR-5705	57507769	57507774	6mer	57507754	57507775	150	-21.32
CAediting_1393298	chr19_57507774_+	ENSG00000152439.11	ENST00000598770	hsa-miR-5705	57507769	57507774	6mer	57507754	57507775	150	-21.32
CAediting_1393325	chr19_57507943_+	ENSG00000152439.11	ENST00000598770	hsa-miR-622	57507941	57507947	7mer-m8	57507927	57507948	145	-17.83
CAediting_1393322	chr19_57507918_+	ENSG00000152439.11	ENST00000598770	hsa-miR-6511b-3p	57507913	57507918	6mer	57507897	57507919	140	-26.13
CAediting_1393322	chr19_57507918_+	ENSG00000152439.11	ENST00000598770	hsa-miR-6511b-3p	57507913	57507918	6mer	57507897	57507919	140	-26.13
CAediting_1393319	chr19_57507898_+	ENSG00000152439.11	ENST00000598770	hsa-miR-660-3p	57507897	57507902	6mer	57507883	57507903	148	-20.06
CAediting_1393320	chr19_57507901_+	ENSG00000152439.11	ENST00000598770	hsa-miR-660-3p	57507897	57507902	6mer	57507883	57507903	148	-20.06
CAediting_1393322	chr19_57507918_+	ENSG00000152439.11	ENST00000598770	hsa-miR-6784-3p	57507913	57507918	6mer	57507897	57507919	151	-31.56
CAediting_1393313	chr19_57507869_+	ENSG00000152439.11	ENST00000598770	hsa-miR-6791-3p	57507865	57507871	7mer-m8	57507852	57507872	154	-17.64
CAediting_1393313	chr19_57507869_+	ENSG00000152439.11	ENST00000598770	hsa-miR-6829-3p	57507865	57507871	7mer-m8	57507853	57507872	155	-20.58
CAediting_1393320	chr19_57507901_+	ENSG00000152439.11	ENST00000598770	hsa-miR-6829-3p	57507897	57507904	8mer-1a	57507885	57507904	144	-20.97
CAediting_1393320	chr19_57507901_+	ENSG00000152439.11	ENST00000598770	hsa-miR-6836-3p	57507898	57507904	7mer-m8	57507885	57507905	140	-15.9
CAediting_1393321	chr19_57507905_+	ENSG00000152439.11	ENST00000598770	hsa-miR-6836-3p	57507898	57507904	7mer-m8	57507885	57507905	140	-15.9
CAediting_1393309	chr19_57507852_+	ENSG00000152439.11	ENST00000598770	hsa-miR-7151-3p	57507845	57507851	7mer-m8	57507832	57507852	140	-17.98
CAediting_1393298	chr19_57507774_+	ENSG00000152439.11	ENST00000598770	hsa-miR-8069	57507772	57507778	7mer-m8	57507757	57507779	140	-20.75
CAediting_1393298	chr19_57507774_+	ENSG00000152439.11	ENST00000598770	hsa-miR-8069	57507772	57507778	7mer-m8	57507757	57507779	140	-20.75

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_748296	chr10_51299626_+	ENSG00000152439.11	ENST00000599847	hsa-miR-605-3p	57516074	57516081	8mer-1a	57516058	57516081	152	-20.69
CAediting_393	chr1_1167164_+	ENSG00000152439.11	ENST00000599847	hsa-miR-200b-3p	57517050	57517056	7mer-m8	57517037	57517057	157	-16.66
CAediting_748296	chr10_51299626_+	ENSG00000152439.11	ENST00000597061	hsa-miR-605-3p	57516074	57516081	8mer-1a	57516058	57516081	152	-20.69
CAediting_1229413	chr17_67471544_+	ENSG00000152439.11	ENST00000599847	hsa-miR-548aa	57513335	57513341	7mer-m8	57513321	57513342	141	-8.97
CAediting_1229415	chr17_67471547_+	ENSG00000152439.11	ENST00000599847	hsa-miR-548aa	57514613	57514619	7mer-m8	57514594	57514620	169	-15.94
CAediting_1160181	chr17_7017644_-	ENSG00000152439.11	ENST00000599847	hsa-miR-195-3p	57515074	57515080	7mer-m8	57515060	57515081	142	-8.27
CAediting_1368054	chr19_46709310_-	ENSG00000152439.11	ENST00000599847	hsa-miR-320e	57516140	57516146	7mer-m8	57516130	57516147	151	-20.29
CAediting_86358	chr1_109598906_+	ENSG00000152439.11	ENST00000599847	hsa-miR-197-5p	57517279	57517285	7mer-m8	57517265	57517286	154	-19.47
CAediting_86358	chr1_109598906_+	ENSG00000152439.11	ENST00000599847	hsa-miR-197-5p	57513587	57513594	8mer-1a	57513573	57513594	156	-23.74
CAediting_396018	chr5_1062918_-	ENSG00000152439.11	ENST00000599847	hsa-miR-4635	57515752	57515758	7mer-m8	57515739	57515759	140	-12.87
CAediting_396018	chr5_1062918_-	ENSG00000152439.11	ENST00000599847	hsa-miR-4635	57516077	57516083	7mer-m8	57516067	57516084	151	-25.1
CAediting_442554	chr5_154685830_+	ENSG00000152439.11	ENST00000599847	hsa-miR-1303	57514559	57514565	7mer-m8	57514545	57514566	149	-15.5
CAediting_1368054	chr19_46709310_-	ENSG00000152439.11	ENST00000597061	hsa-miR-320e	57516140	57516146	7mer-m8	57516130	57516147	151	-20.29
CAediting_396018	chr5_1062918_-	ENSG00000152439.11	ENST00000597061	hsa-miR-4635	57516077	57516083	7mer-m8	57516067	57516084	151	-25.1
CAediting_468389	chr6_31355314_-	ENSG00000152439.11	ENST00000599847	hsa-miR-6891-5p	57514431	57514436	6mer	57514417	57514437	140	-26.47

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_393	chr1_1167164_+	ENSG00000152439.11	ENST00000599847	hsa-miR-200b-3p	57513737	57513743	7mer-m8	57513723	57513744	140	-10.05
CAediting_1368054	chr19_46709310_-	ENSG00000152439.11	ENST00000599847	hsa-miR-320e	57517387	57517393	7mer-1a	57517377	57517393	142	-20.2
CAediting_688080	chr9_63819626_+	ENSG00000152439.11	ENST00000599847	hsa-miR-4477b	57517807	57517813	7mer-m8	57517789	57517814	153	-13.01
CAediting_688081	chr9_63819627_+	ENSG00000152439.11	ENST00000599847	hsa-miR-4477b	57517807	57517813	7mer-m8	57517789	57517814	153	-13.01
CAediting_228905	chr2_188297554_+	ENSG00000152439.11	ENST00000599847	hsa-miR-561-3p	57514308	57514314	7mer-m8	57514294	57514315	150	-12.43
CAediting_748296	chr10_51299626_+	ENSG00000152439.11	ENST00000599847	hsa-miR-605-3p	57513940	57513946	7mer-m8	57513926	57513947	153	-16.27
CAediting_748296	chr10_51299626_+	ENSG00000152439.11	ENST00000599847	hsa-miR-605-3p	57513940	57513946	7mer-m8	57513939	57513958	152	-19.86
CAediting_748296	chr10_51299626_+	ENSG00000152439.11	ENST00000599847	hsa-miR-605-3p	57513951	57513957	7mer-m8	57513939	57513958	152	-19.86
CAediting_1351755	chr19_40282625_-	ENSG00000152439.11	ENST00000599847	hsa-miR-641	57517921	57517927	7mer-m8	57517905	57517928	143	-13.77

Differentially expressed gene-miRNA network

Top

The effects of the RNA editing to the stability of the RNA structures for ZNF773

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST

ENST type

RNA structure without RNA A-to-I editing.

RNA structure with RNA A-to-I editing.

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID

ENST

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

Top

Relation with ADAR for ZNF773

Correlation between ADAR gene expression and RNA editing frequency

Cancer

CAeditomID

position

ADAR1 (p-val)

ADAR1 (coeff.)

ADAR2 (p-val)

ADAR2 (coeff.)

ADAR3 (p-val)

ADAR3 (coeff.)

Top

Relation with cancer stages for ZNF773

Correlation between Cancer stages and RNA editing frequency

Cancer

Stage_type

CAeditomID

position

P-val

Coeff.

Top

Relation with survival for ZNF773

Correlation between RNA editing and survival

Cancer

CAeditomID

position

KMpvalue

Coxpvalue

CoxHR

Top

RelatedDrugs for ZNF773

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

Top

RelatedDiseases for ZNF773

Diseases associated with this gene.
(DisGeNet 7.0)

Gene

Disease ID

Disease name

# pubmeds

Source

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene