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Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with cancer stages

Soverview

Relation with survival state

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene

Editing gene: ATP9B (CAeditome ID:374868)

Gene summary for ATP9B

check button Gene summary
Gene informationGene symbol

ATP9B

Gene ID

374868

Gene nameATPase phospholipid transporting 9B (putative)
SynonymsATPASEP|ATPIIB|HUSSY-20|NEO1L|hMMR1
Cytomap

18q23

Type of geneprotein-coding
Descriptionprobable phospholipid-transporting ATPase IIBATPase type IV, phospholipid transporting (P-type)ATPase, class II, type 9Bmacrophage MHC receptor 1
Modification date20210518
UniProtAcc

O43861

Context

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID
ATP9B

GO:0005802

Probable phospholipid-transporting ATPase IIB

21914794

ATP9B

GO:0048471

Probable phospholipid-transporting ATPase IIB

21914794


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RNA A-to-I events for ATP9B

check buttonRNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.
all structure

check button RNA editing frequencies across 33 cancers of gene: ENSG00000166377.18

check button RNA A-to-I editing events in Cancer.
CAediting_1268885(79086329, +), CAediting_1268886(79086333, +), CAediting_1268887(79096987, +), CAediting_1268888(79118814, +), CAediting_1268889(79118815, +), CAediting_1268890(79118884, +), CAediting_1268891(79118886, +), CAediting_1268892(79118908, +), CAediting_1268893(79118915, +), CAediting_1268894(79118919, +), CAediting_1268895(79118924, +), CAediting_1268896(79118968, +), CAediting_1268897(79118991, +), CAediting_1268898(79119003, +), CAediting_1268899(79119006, +), CAediting_1268900(79119007, +), CAediting_1268901(79119020, +), CAediting_1268902(79119040, +), CAediting_1268903(79136861, +), CAediting_1268904(79136866, +), CAediting_1268905(79136868, +), CAediting_1268906(79136909, +), CAediting_1268907(79136970, +), CAediting_1268908(79141351, +), CAediting_1268909(79157097, +), CAediting_1268910(79157099, +), CAediting_1268911(79157105, +), CAediting_1268912(79157114, +), CAediting_1268913(79157141, +), CAediting_1268914(79157151, +), CAediting_1268915(79157174, +), CAediting_1268916(79157175, +), CAediting_1268917(79157177, +), CAediting_1268918(79157273, +), CAediting_1268919(79157275, +), CAediting_1268920(79157276, +), CAediting_1268921(79157311, +), CAediting_1268922(79157316, +), CAediting_1268923(79157317, +), CAediting_1268924(79157357, +), CAediting_1268925(79158297, +), CAediting_1268926(79158476, +), CAediting_1268927(79158554, +), CAediting_1268928(79158555, +), CAediting_1268929(79160901, +), CAediting_1268930(79164031, +), CAediting_1268931(79164048, +), CAediting_1268932(79164058, +), CAediting_1268933(79164135, +), CAediting_1268934(79164187, +), CAediting_1268935(79164598, +), CAediting_1268936(79164639, +), CAediting_1268937(79164640, +), CAediting_1268938(79175080, +), CAediting_1268939(79175097, +), CAediting_1268940(79199523, +), CAediting_1268941(79199585, +), CAediting_1268942(79199586, +), CAediting_1268943(79199587, +), CAediting_1268944(79199598, +), CAediting_1268945(79199601, +), CAediting_1268946(79199602, +), CAediting_1268947(79199605, +), CAediting_1268948(79199607, +), CAediting_1268949(79199610, +), CAediting_1268950(79199616, +), CAediting_1268951(79199656, +), CAediting_1268952(79199659, +), CAediting_1268953(79199665, +), CAediting_1268954(79199678, +), CAediting_1268955(79199683, +), CAediting_1268956(79199684, +), CAediting_1268957(79199688, +), CAediting_1268958(79199714, +), CAediting_1268959(79214884, +), CAediting_1268960(79214919, +), CAediting_1268961(79214938, +), CAediting_1268962(79214947, +), CAediting_1268963(79214971, +), CAediting_1268964(79214972, +), CAediting_1268965(79214983, +), CAediting_1268966(79214986, +), CAediting_1268967(79214994, +), CAediting_1268968(79215001, +), CAediting_1268969(79215027, +), CAediting_1268970(79215037, +), CAediting_1268971(79215041, +), CAediting_1268972(79215062, +), CAediting_1268973(79215067, +), CAediting_1268974(79215097, +), CAediting_1268975(79215098, +), CAediting_1268976(79215105, +), CAediting_1268977(79215113, +), CAediting_1268978(79215819, +), CAediting_1268979(79228796, +), CAediting_1268980(79263964, +), CAediting_1268981(79264012, +), CAediting_1268982(79264094, +), CAediting_1268983(79348933, +), CAediting_1268984(79350849, +), CAediting_1268985(79354442, +), CAediting_1268986(79364284, +), CAediting_1268987(79364285, +), CAediting_1268988(79371118, +), CAediting_1268989(79371225, +), CAediting_1268990(79371306, +), CAediting_1268991(79377331, +),

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RNA editing positional annotations for ATP9B using Annovar

check button Protein coding RNA editing(s).
CAeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred
CAediting_1268991chr18_79377331_+nonsynonymous SNVENST00000307671.10c.A3359Gp.K1120R.D.
CAediting_1268991chr18_79377331_+nonsynonymous SNVENST00000426216.5c.A3392Gp.K1131R.D.

check button Gene structure information of RNA editing(s).
CAeditome IDPositionVariant type
CAediting_1268885chr18_79086329_+ncRNA_exonic
CAediting_1268886chr18_79086333_+ncRNA_exonic
CAediting_1268887chr18_79096987_+ncRNA_intronic
CAediting_1268888chr18_79118814_+ncRNA_intronic
CAediting_1268889chr18_79118815_+ncRNA_intronic
CAediting_1268890chr18_79118884_+ncRNA_intronic
CAediting_1268891chr18_79118886_+ncRNA_intronic
CAediting_1268892chr18_79118908_+ncRNA_intronic
CAediting_1268893chr18_79118915_+ncRNA_intronic
CAediting_1268894chr18_79118919_+ncRNA_intronic
CAediting_1268895chr18_79118924_+ncRNA_intronic
CAediting_1268896chr18_79118968_+ncRNA_intronic
CAediting_1268897chr18_79118991_+ncRNA_intronic
CAediting_1268898chr18_79119003_+ncRNA_intronic
CAediting_1268899chr18_79119006_+ncRNA_intronic
CAediting_1268900chr18_79119007_+ncRNA_intronic
CAediting_1268901chr18_79119020_+ncRNA_intronic
CAediting_1268902chr18_79119040_+ncRNA_intronic
CAediting_1268903chr18_79136861_+ncRNA_intronic
CAediting_1268904chr18_79136866_+ncRNA_intronic
CAediting_1268905chr18_79136868_+ncRNA_intronic
CAediting_1268906chr18_79136909_+ncRNA_intronic
CAediting_1268907chr18_79136970_+ncRNA_intronic
CAediting_1268908chr18_79141351_+ncRNA_intronic
CAediting_1268909chr18_79157097_+ncRNA_intronic
CAediting_1268910chr18_79157099_+ncRNA_intronic
CAediting_1268911chr18_79157105_+ncRNA_intronic
CAediting_1268912chr18_79157114_+ncRNA_intronic
CAediting_1268913chr18_79157141_+ncRNA_intronic
CAediting_1268914chr18_79157151_+ncRNA_intronic
CAediting_1268915chr18_79157174_+ncRNA_intronic
CAediting_1268916chr18_79157175_+ncRNA_intronic
CAediting_1268917chr18_79157177_+ncRNA_intronic
CAediting_1268918chr18_79157273_+ncRNA_intronic
CAediting_1268919chr18_79157275_+ncRNA_intronic
CAediting_1268920chr18_79157276_+ncRNA_intronic
CAediting_1268921chr18_79157311_+ncRNA_intronic
CAediting_1268922chr18_79157316_+ncRNA_intronic
CAediting_1268923chr18_79157317_+ncRNA_intronic
CAediting_1268924chr18_79157357_+ncRNA_intronic
CAediting_1268925chr18_79158297_+ncRNA_intronic
CAediting_1268926chr18_79158476_+ncRNA_intronic
CAediting_1268927chr18_79158554_+ncRNA_intronic
CAediting_1268928chr18_79158555_+ncRNA_intronic
CAediting_1268929chr18_79160901_+ncRNA_intronic
CAediting_1268930chr18_79164031_+ncRNA_intronic
CAediting_1268931chr18_79164048_+ncRNA_intronic
CAediting_1268932chr18_79164058_+ncRNA_intronic
CAediting_1268933chr18_79164135_+ncRNA_intronic
CAediting_1268934chr18_79164187_+ncRNA_intronic
CAediting_1268935chr18_79164598_+ncRNA_intronic
CAediting_1268936chr18_79164639_+ncRNA_intronic
CAediting_1268937chr18_79164640_+ncRNA_intronic
CAediting_1268938chr18_79175080_+ncRNA_intronic
CAediting_1268939chr18_79175097_+ncRNA_intronic
CAediting_1268940chr18_79199523_+ncRNA_intronic
CAediting_1268941chr18_79199585_+ncRNA_intronic
CAediting_1268942chr18_79199586_+ncRNA_intronic
CAediting_1268943chr18_79199587_+ncRNA_intronic
CAediting_1268944chr18_79199598_+ncRNA_intronic
CAediting_1268945chr18_79199601_+ncRNA_intronic
CAediting_1268946chr18_79199602_+ncRNA_intronic
CAediting_1268947chr18_79199605_+ncRNA_intronic
CAediting_1268948chr18_79199607_+ncRNA_intronic
CAediting_1268949chr18_79199610_+ncRNA_intronic
CAediting_1268950chr18_79199616_+ncRNA_intronic
CAediting_1268951chr18_79199656_+ncRNA_intronic
CAediting_1268952chr18_79199659_+ncRNA_intronic
CAediting_1268953chr18_79199665_+ncRNA_intronic
CAediting_1268954chr18_79199678_+ncRNA_intronic
CAediting_1268955chr18_79199683_+ncRNA_intronic
CAediting_1268956chr18_79199684_+ncRNA_intronic
CAediting_1268957chr18_79199688_+ncRNA_intronic
CAediting_1268958chr18_79199714_+ncRNA_intronic
CAediting_1268959chr18_79214884_+ncRNA_intronic
CAediting_1268960chr18_79214919_+ncRNA_intronic
CAediting_1268961chr18_79214938_+ncRNA_intronic
CAediting_1268962chr18_79214947_+ncRNA_intronic
CAediting_1268963chr18_79214971_+ncRNA_intronic
CAediting_1268964chr18_79214972_+ncRNA_intronic
CAediting_1268965chr18_79214983_+ncRNA_intronic
CAediting_1268966chr18_79214986_+ncRNA_intronic
CAediting_1268967chr18_79214994_+ncRNA_intronic
CAediting_1268968chr18_79215001_+ncRNA_intronic
CAediting_1268969chr18_79215027_+ncRNA_intronic
CAediting_1268970chr18_79215037_+ncRNA_intronic
CAediting_1268971chr18_79215041_+ncRNA_intronic
CAediting_1268972chr18_79215062_+ncRNA_intronic
CAediting_1268973chr18_79215067_+ncRNA_intronic
CAediting_1268974chr18_79215097_+ncRNA_intronic
CAediting_1268975chr18_79215098_+ncRNA_intronic
CAediting_1268976chr18_79215105_+ncRNA_intronic
CAediting_1268977chr18_79215113_+ncRNA_intronic
CAediting_1268978chr18_79215819_+ncRNA_intronic
CAediting_1268979chr18_79228796_+ncRNA_intronic
CAediting_1268980chr18_79263964_+ncRNA_intronic
CAediting_1268981chr18_79264012_+ncRNA_intronic
CAediting_1268982chr18_79264094_+ncRNA_intronic
CAediting_1268983chr18_79348933_+ncRNA_intronic
CAediting_1268984chr18_79350849_+ncRNA_intronic
CAediting_1268985chr18_79354442_+ncRNA_exonic
CAediting_1268986chr18_79364284_+ncRNA_exonic
CAediting_1268987chr18_79364285_+ncRNA_intronic
CAediting_1268988chr18_79371118_+ncRNA_intronic
CAediting_1268989chr18_79371225_+ncRNA_intronic
CAediting_1268990chr18_79371306_+ncRNA_intronic
CAediting_1268991chr18_79377331_+exonic

check button Repat-regional RNA editing(s).
CAeditome IDPositionRepeat familyRepeat sub familyRepeat name
CAediting_1268885chr18_79086329_+SINEAluAluSx1
CAediting_1268886chr18_79086333_+SINEAluAluSx1
CAediting_1268887chr18_79096987_+SINEAluAluSz
CAediting_1268888chr18_79118814_+SINEAluAluJb
CAediting_1268889chr18_79118815_+SINEAluAluJb
CAediting_1268890chr18_79118884_+SINEAluAluJb
CAediting_1268891chr18_79118886_+SINEAluAluJb
CAediting_1268892chr18_79118908_+SINEAluAluJb
CAediting_1268893chr18_79118915_+SINEAluAluJb
CAediting_1268894chr18_79118919_+SINEAluAluJb
CAediting_1268895chr18_79118924_+SINEAluAluJb
CAediting_1268896chr18_79118968_+SINEAluAluJb
CAediting_1268897chr18_79118991_+SINEAluAluJb
CAediting_1268898chr18_79119003_+SINEAluAluJb
CAediting_1268899chr18_79119006_+SINEAluAluJb
CAediting_1268900chr18_79119007_+SINEAluAluJb
CAediting_1268901chr18_79119020_+SINEAluAluJb
CAediting_1268902chr18_79119040_+SINEAluAluJb
CAediting_1268903chr18_79136861_+LTRERVL-MaLRTHE1C
CAediting_1268904chr18_79136866_+LTRERVL-MaLRTHE1C
CAediting_1268905chr18_79136868_+LTRERVL-MaLRTHE1C
CAediting_1268906chr18_79136909_+LTRERVL-MaLRTHE1C
CAediting_1268907chr18_79136970_+LTRERVL-MaLRTHE1C
CAediting_1268908chr18_79141351_+LTRERVL-MaLRTHE1C
CAediting_1268909chr18_79157097_+SINEAluAluSz
CAediting_1268910chr18_79157099_+SINEAluAluSz
CAediting_1268911chr18_79157105_+SINEAluAluSz
CAediting_1268912chr18_79157114_+SINEAluAluSz
CAediting_1268913chr18_79157141_+SINEAluAluSz
CAediting_1268914chr18_79157151_+SINEAluAluSz
CAediting_1268915chr18_79157174_+SINEAluAluSz
CAediting_1268916chr18_79157175_+SINEAluAluSz
CAediting_1268917chr18_79157177_+SINEAluAluSz
CAediting_1268918chr18_79157273_+SINEAluAluSz
CAediting_1268919chr18_79157275_+SINEAluAluSz
CAediting_1268920chr18_79157276_+SINEAluAluSz
CAediting_1268921chr18_79157311_+SINEAluAluSz
CAediting_1268922chr18_79157316_+SINEAluAluSz
CAediting_1268923chr18_79157317_+SINEAluAluSz
CAediting_1268924chr18_79157357_+SINEAluAluSz
CAediting_1268925chr18_79158297_+SINEAluAluJr4
CAediting_1268926chr18_79158476_+SINEAluAluJr4
CAediting_1268927chr18_79158554_+SINEAluAluJr4
CAediting_1268928chr18_79158555_+SINEAluAluJr4
CAediting_1268929chr18_79160901_+SINEAluAluSz
CAediting_1268930chr18_79164031_+SINEAluAluJo
CAediting_1268931chr18_79164048_+SINEAluAluJo
CAediting_1268932chr18_79164058_+SINEAluAluJo
CAediting_1268933chr18_79164135_+SINEAluAluJo
CAediting_1268934chr18_79164187_+SINEAluAluJo
CAediting_1268935chr18_79164598_+SINEAluAluY
CAediting_1268936chr18_79164639_+SINEAluAluY
CAediting_1268937chr18_79164640_+SINEAluAluY
CAediting_1268938chr18_79175080_+SINEAluAluSc
CAediting_1268939chr18_79175097_+SINEAluAluSc
CAediting_1268940chr18_79199523_+SINEAluAluSc
CAediting_1268941chr18_79199585_+SINEAluAluSc
CAediting_1268942chr18_79199586_+SINEAluAluSc
CAediting_1268943chr18_79199587_+SINEAluAluSc
CAediting_1268944chr18_79199598_+SINEAluAluSc
CAediting_1268945chr18_79199601_+SINEAluAluSc
CAediting_1268946chr18_79199602_+SINEAluAluSc
CAediting_1268947chr18_79199605_+SINEAluAluSc
CAediting_1268948chr18_79199607_+SINEAluAluSc
CAediting_1268949chr18_79199610_+SINEAluAluSc
CAediting_1268950chr18_79199616_+SINEAluAluSc
CAediting_1268951chr18_79199656_+SINEAluAluSc
CAediting_1268952chr18_79199659_+SINEAluAluSc
CAediting_1268953chr18_79199665_+SINEAluAluSc
CAediting_1268954chr18_79199678_+SINEAluAluSc
CAediting_1268955chr18_79199683_+SINEAluAluSc
CAediting_1268956chr18_79199684_+SINEAluAluSc
CAediting_1268957chr18_79199688_+SINEAluAluSc
CAediting_1268958chr18_79199714_+SINEAluAluSc
CAediting_1268959chr18_79214884_+SINEAluAluSx1
CAediting_1268960chr18_79214919_+SINEAluAluSx1
CAediting_1268961chr18_79214938_+SINEAluAluSx1
CAediting_1268962chr18_79214947_+SINEAluAluSx1
CAediting_1268963chr18_79214971_+SINEAluAluSx1
CAediting_1268964chr18_79214972_+SINEAluAluSx1
CAediting_1268965chr18_79214983_+SINEAluAluSx1
CAediting_1268966chr18_79214986_+SINEAluAluSx1
CAediting_1268967chr18_79214994_+SINEAluAluSx1
CAediting_1268968chr18_79215001_+SINEAluAluSx1
CAediting_1268969chr18_79215027_+SINEAluAluSx1
CAediting_1268970chr18_79215037_+SINEAluAluSx1
CAediting_1268971chr18_79215041_+SINEAluAluSx1
CAediting_1268972chr18_79215062_+SINEAluAluSx1
CAediting_1268973chr18_79215067_+SINEAluAluSx1
CAediting_1268974chr18_79215097_+SINEAluAluSx1
CAediting_1268975chr18_79215098_+SINEAluAluSx1
CAediting_1268976chr18_79215105_+SINEAluAluSx1
CAediting_1268977chr18_79215113_+SINEAluAluSx1
CAediting_1268978chr18_79215819_+SINEAluAluSz
CAediting_1268979chr18_79228796_+SINEAluAluJb
CAediting_1268980chr18_79263964_+SINEAluAluY
CAediting_1268981chr18_79264012_+SINEAluAluY
CAediting_1268982chr18_79264094_+SINEAluAluY
CAediting_1268983chr18_79348933_+SINEAluAluSx
CAediting_1268984chr18_79350849_+SINEAluAluSz6
CAediting_1268985chr18_79354442_+SINEAluAluJb
CAediting_1268986chr18_79364284_+SINEAluAluYg6
CAediting_1268987chr18_79364285_+SINEAluAluYg6
CAediting_1268988chr18_79371118_+SINEAluAluSc
CAediting_1268989chr18_79371225_+SINEAluAluSc
CAediting_1268990chr18_79371306_+SINEAluAluSc

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RNA A-to-I editing events in the alternative splicing sites for ATP9B

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeCAeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength

check button Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000166377.18.ATP9B.

check button Correlation between RNA A-to-I editing and PSI for ENSG00000166377.18.ATP9B.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for ATP9B

check button Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

check button Correlation between RNA A-to-I editing and gene expression.

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for ATP9B

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.
all structure


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The effects of the RNA editing to the miRNA binding sites for ATP9B

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_1268991chr18_79377331_+ENSG00000166377.18ENST00000590477hsa-miR-544b79377325793773317mer-m87937731179377332155.00-19.83
CAediting_1268991chr18_79377331_+ENSG00000166377.18ENST00000588921hsa-miR-544b79377325793773317mer-m87937731179377332155.00-19.83

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_748296chr10_51299626_+ENSG00000166377.18ENST00000586366hsa-miR-605-3p79254407792544148mer-1a7925439379254414144-13.82
CAediting_688080chr9_63819626_+ENSG00000166377.18ENST00000586366hsa-miR-4477b79255213792552208mer-1a7925519679255220158-20.2
CAediting_688080chr9_63819626_+ENSG00000166377.18ENST00000590477hsa-miR-4477b79377324793773307mer-m87937731079377331155-18.74
CAediting_688080chr9_63819626_+ENSG00000166377.18ENST00000588921hsa-miR-4477b79377324793773307mer-m87937731079377331155-18.74
CAediting_1054808chr15_66496985_-ENSG00000166377.18ENST00000586366hsa-miR-451279255114792551218mer-1a7925510279255121144-16.84
CAediting_1229415chr17_67471547_+ENSG00000166377.18ENST00000586366hsa-miR-548aa79253429792534368mer-1a7925340879253436164-15.58
CAediting_1351755chr19_40282625_-ENSG00000166377.18ENST00000586366hsa-miR-64179254336792543427mer-m87925431779254343143-17.05
CAediting_117844chr1_162342605_+ENSG00000166377.18ENST00000586366hsa-miR-556-3p79255245792552528mer-1a7925523079255252162-16.36
CAediting_117844chr1_162342605_+ENSG00000166377.18ENST00000586722hsa-miR-556-3p79115832791158387mer-m87911582079115839153-10.9
CAediting_1229415chr17_67471547_+ENSG00000166377.18ENST00000587878hsa-miR-548aa79253429792534368mer-1a7925340879253436164-15.58
CAediting_1306323chr19_13836462_-ENSG00000166377.18ENST00000590477hsa-miR-27a-3p79377263793772697mer-m87937725079377270150-18.33
CAediting_396018chr5_1062918_-ENSG00000166377.18ENST00000590477hsa-miR-463579377325793773317mer-m87937731279377332150-15.41
CAediting_1306323chr19_13836462_-ENSG00000166377.18ENST00000588921hsa-miR-27a-3p79377263793772697mer-m87937725079377270150-18.33
CAediting_396018chr5_1062918_-ENSG00000166377.18ENST00000588921hsa-miR-463579377325793773317mer-m87937731279377332150-15.41
CAediting_468389chr6_31355314_-ENSG00000166377.18ENST00000586366hsa-miR-6891-5p79254711792547166mer7925469979254717141-21.94
CAediting_468389chr6_31355314_-ENSG00000166377.18ENST00000589326hsa-miR-6891-5p79332910793329156mer7933289879332916140-23.75

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_1368054chr19_46709310_-ENSG00000166377.18ENST00000586366hsa-miR-320e79254697792547037mer-m87925468779254704147-15.52
CAediting_604450chr7_133034877_-ENSG00000166377.18ENST00000586366hsa-miR-365479253869792538757mer-m87925385879253876145-15.06
CAediting_1524209chrX_134546392_-ENSG00000166377.18ENST00000586366hsa-miR-503-5p79254610792546156mer7925459379254616140-26.79
CAediting_748296chr10_51299626_+ENSG00000166377.18ENST00000586366hsa-miR-605-3p79254519792545257mer-m87925450579254526148-13.06
CAediting_1351755chr19_40282625_-ENSG00000166377.18ENST00000586366hsa-miR-64179253776792537816mer7925375779253782140-13.62
CAediting_468389chr6_31355314_-ENSG00000166377.18ENST00000586366hsa-miR-6891-5p79254479792544857mer-m87925446879254486149-16.04
CAediting_396018chr5_1062918_-ENSG00000166377.18ENST00000586722hsa-miR-463579115228791152347mer-m87911521779115235141-13.82

check button Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for ATP9B

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.

check button RNA A-to-I editing in RNA structures for Minimum free energy (MFE).
CAeditom_IDENSTEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI

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Relation with ADAR for ATP9B

check button Correlation between ADAR gene expression and RNA editing frequency
CancerCAeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)

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Relation with cancer stages for ATP9B

check button Correlation between Cancer stages and RNA editing frequency
CancerStage_typeCAeditomIDpositionP-valCoeff.

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Relation with survival for ATP9B

check button Correlation between RNA editing and survival
CancerCAeditomIDpositionKMpvalueCoxpvalueCoxHR

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RelatedDrugs for ATP9B

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for ATP9B

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease name# pubmedsSource
ATP9BC0009171Cocaine Abuse1CTD_human
ATP9BC0236736Cocaine-Related Disorders1CTD_human
ATP9BC0600427Cocaine Dependence1CTD_human