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Editing gene: ITGA3 (CAeditome ID:3675)

Gene summary for ITGA3

Gene summary

Gene information	Gene symbol	ITGA3
	Gene ID	3675
	Gene name	integrin subunit alpha 3
	Synonyms	CD49C\|FRP-2\|GAP-B3\|GAPB3\|ILNEB\|MSK18\|VCA-2\|VL3A\|VLA3a
	Cytomap	17q21.33
	Type of gene	protein-coding
	Description	integrin alpha-3CD49 antigen-like family member Calpha 3 subunit of VLA-3 receptorantigen CD49Cantigen identified by monoclonal antibody J143galactoprotein B3integrin alpha 3integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor)testi
	Modification date	20210518
	UniProtAcc	P26006
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene	GO ID	GO term	PubMed ID
ITGA3	GO:0046982	Integrin alpha-3	10455171
ITGA3	GO:1903078	Integrin alpha-3	10455171
ITGA3	GO:0005886	Integrin alpha-3	21310825
ITGA3	GO:0009986	Integrin alpha-3	19933311
ITGA3	GO:0009986	Integrin alpha-3	20563599
ITGA3	GO:0009986	Integrin alpha-3	21310825
ITGA3	GO:0009986	Integrin alpha-3	24220332
ITGA3	GO:0009986	Integrin alpha-3	25063885
ITGA3	GO:0031527	Integrin alpha-3	10455171
ITGA3	GO:0071944	Integrin alpha-3	24220332
ITGA3	GO:0034667	Integrin alpha-3	25063885
ITGA3	GO:0043235	Integrin alpha-3	23382219

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RNA A-to-I events for ITGA3

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000005884.16

RNA A-to-I editing events in Cancer.

CAediting_1211906(50059125, +), CAediting_1211907(50062060, +), CAediting_1211908(50065779, +), CAediting_1211909(50065784, +), CAediting_1211910(50065822, +), CAediting_1211911(50065824, +), CAediting_1211912(50065825, +), CAediting_1211913(50065854, +), CAediting_1211914(50065885, +), CAediting_1211915(50065929, +), CAediting_1211916(50065939, +), CAediting_1211917(50065945, +), CAediting_1211918(50065953, +), CAediting_1211919(50065954, +), CAediting_1211920(50065961, +), CAediting_1211921(50065978, +), CAediting_1211922(50065982, +), CAediting_1211923(50065983, +), CAediting_1211924(50065988, +), CAediting_1211925(50066082, +), CAediting_1211926(50066093, +), CAediting_1211927(50066098, +), CAediting_1211928(50066103, +), CAediting_1211929(50066108, +), CAediting_1211930(50066122, +), CAediting_1211931(50066128, +), CAediting_1211932(50066129, +), CAediting_1211933(50066177, +), CAediting_1211934(50066181, +), CAediting_1211935(50066183, +), CAediting_1211936(50066191, +), CAediting_1211937(50066203, +), CAediting_1211938(50066214, +), CAediting_1211939(50066216, +), CAediting_1211940(50066229, +), CAediting_1211941(50066233, +), CAediting_1211942(50066268, +), CAediting_1211943(50066345, +), CAediting_1211944(50066360, +), CAediting_1211945(50066466, +), CAediting_1211946(50066539, +), CAediting_1211947(50066546, +), CAediting_1211948(50066580, +), CAediting_1211949(50066589, +), CAediting_1211950(50066671, +), CAediting_1211951(50066690, +), CAediting_1211952(50066695, +), CAediting_1211953(50066696, +), CAediting_1211954(50066725, +), CAediting_1211955(50066730, +), CAediting_1211956(50067412, +), CAediting_1211957(50068532, +), CAediting_1211958(50068535, +), CAediting_1211959(50068540, +), CAediting_1211960(50068564, +), CAediting_1211961(50068595, +), CAediting_1211962(50068601, +), CAediting_1211963(50068631, +), CAediting_1211964(50068635, +), CAediting_1211965(50068638, +), CAediting_1211966(50068643, +), CAediting_1211967(50068668, +), CAediting_1211968(50068685, +), CAediting_1211969(50068702, +), CAediting_1211970(50068711, +), CAediting_1211971(50068716, +), CAediting_1211972(50068740, +), CAediting_1211973(50068741, +), CAediting_1211974(50068867, +), CAediting_1211975(50068977, +), CAediting_1211976(50068989, +), CAediting_1211977(50069055, +), CAediting_1211978(50069110, +), CAediting_1211979(50069388, +), CAediting_1211980(50069410, +), CAediting_1211981(50069417, +), CAediting_1211982(50069419, +), CAediting_1211983(50069446, +), CAediting_1211984(50069470, +), CAediting_1211985(50069471, +), CAediting_1211986(50069480, +), CAediting_1211987(50069504, +), CAediting_1211988(50069506, +), CAediting_1211989(50069513, +), CAediting_1211990(50069514, +), CAediting_1211991(50069515, +), CAediting_1211992(50069516, +), CAediting_1211993(50069519, +), CAediting_1211994(50069523, +), CAediting_1211995(50069539, +), CAediting_1211996(50069551, +), CAediting_1211997(50069555, +), CAediting_1211998(50069559, +), CAediting_1211999(50069607, +), CAediting_1212000(50069618, +), CAediting_1212001(50069653, +), CAediting_1212002(50069654, +), CAediting_1212003(50070368, +), CAediting_1212004(50070372, +), CAediting_1212005(50070374, +), CAediting_1212006(50070384, +), CAediting_1212007(50070391, +), CAediting_1212008(50070460, +), CAediting_1212009(50070481, +), CAediting_1212010(50070490, +), CAediting_1212011(50070499, +), CAediting_1212012(50070535, +), CAediting_1212013(50070567, +), CAediting_1212014(50070575, +), CAediting_1212015(50070595, +), CAediting_1212016(50070596, +), CAediting_1212017(50070601, +), CAediting_1212018(50082026, +), CAediting_1212019(50082030, +), CAediting_1212020(50082038, +), CAediting_1212021(50082051, +), CAediting_1212022(50082058, +), CAediting_1212023(50082074, +), CAediting_1212024(50082087, +), CAediting_1212025(50082088, +), CAediting_1212026(50082090, +), CAediting_1212027(50082091, +), CAediting_1212028(50082092, +), CAediting_1212029(50082100, +), CAediting_1212030(50082105, +), CAediting_1212031(50082114, +), CAediting_1212032(50082117, +), CAediting_1212033(50082122, +), CAediting_1212034(50082127, +), CAediting_1212035(50082129, +), CAediting_1212036(50082143, +), CAediting_1212037(50082153, +), CAediting_1212038(50082206, +), CAediting_1212039(50082208, +), CAediting_1212040(50082218, +), CAediting_1212041(50082229, +), CAediting_1212042(50082259, +), CAediting_1212043(50082278, +), CAediting_1212044(50082283, +), CAediting_1212045(50082305, +), CAediting_1212046(50082308, +), CAediting_1212047(50082318, +), CAediting_1212048(50082320, +), CAediting_1212049(50082331, +), CAediting_1212050(50082344, +), CAediting_1212051(50082359, +), CAediting_1212052(50082362, +), CAediting_1212053(50082376, +), CAediting_1212054(50082384, +), CAediting_1212055(50082420, +), CAediting_1212056(50082437, +), CAediting_1212057(50082438, +), CAediting_1212058(50082439, +), CAediting_1212059(50082451, +), CAediting_1212060(50082453, +), CAediting_1212061(50082457, +), CAediting_1212062(50082486, +), CAediting_1212063(50082492, +), CAediting_1212064(50082495, +), CAediting_1212065(50082499, +), CAediting_1212066(50082502, +), CAediting_1212067(50082509, +), CAediting_1212068(50082521, +), CAediting_1212069(50082546, +), CAediting_1212070(50082547, +), CAediting_1212071(50082550, +), CAediting_1212072(50082559, +), CAediting_1212073(50082564, +), CAediting_1212074(50082572, +), CAediting_1212075(50082573, +), CAediting_1212076(50082574, +), CAediting_1212077(50082575, +), CAediting_1212078(50082577, +), CAediting_1212079(50082586, +), CAediting_1212080(50082588, +), CAediting_1212081(50082592, +), CAediting_1212082(50082604, +), CAediting_1212083(50083450, +), CAediting_1212084(50083468, +), CAediting_1212085(50083469, +), CAediting_1212086(50083474, +), CAediting_1212087(50083486, +), CAediting_1212088(50083490, +), CAediting_1212089(50083494, +), CAediting_1212090(50083498, +), CAediting_1212091(50083513, +), CAediting_1212092(50083516, +), CAediting_1212093(50083536, +), CAediting_1212094(50083537, +), CAediting_1212095(50083552, +), CAediting_1212096(50083564, +), CAediting_1212097(50083566, +), CAediting_1212098(50083567, +), CAediting_1212099(50083568, +), CAediting_1212100(50083571, +), CAediting_1212101(50083573, +), CAediting_1212102(50083574, +), CAediting_1212103(50083577, +), CAediting_1212104(50083595, +), CAediting_1212105(50083597, +), CAediting_1212106(50083603, +), CAediting_1212107(50083609, +), CAediting_1212108(50083620, +), CAediting_1212109(50083626, +), CAediting_1212110(50083633, +), CAediting_1212111(50083635, +), CAediting_1212112(50083636, +), CAediting_1212113(50083649, +), CAediting_1212114(50083679, +), CAediting_1212115(50083684, +), CAediting_1212116(50083706, +), CAediting_1212117(50083975, +), CAediting_1212118(50083981, +), CAediting_1212119(50083982, +), CAediting_1212120(50083987, +), CAediting_1212121(50083990, +), CAediting_1212122(50083995, +), CAediting_1212123(50083998, +), CAediting_1212124(50084003, +), CAediting_1212125(50084004, +), CAediting_1212126(50084048, +), CAediting_1212127(50084050, +), CAediting_1212128(50084057, +), CAediting_1212129(50084058, +), CAediting_1212130(50084063, +), CAediting_1212131(50084069, +), CAediting_1212132(50084072, +), CAediting_1212133(50084073, +), CAediting_1212134(50084074, +), CAediting_1212135(50084075, +), CAediting_1212136(50084076, +), CAediting_1212137(50084078, +), CAediting_1212138(50084081, +), CAediting_1212139(50084082, +), CAediting_1212140(50084083, +), CAediting_1212141(50084087, +), CAediting_1212142(50084088, +), CAediting_1212143(50084113, +), CAediting_1212144(50084114, +), CAediting_1212145(50084123, +), CAediting_1212146(50084127, +), CAediting_1212147(50084130, +), CAediting_1212148(50084136, +), CAediting_1212149(50084140, +), CAediting_1212150(50084142, +), CAediting_1212151(50084143, +), CAediting_1212152(50084154, +), CAediting_1212153(50084155, +), CAediting_1212154(50084160, +), CAediting_1212155(50084181, +), CAediting_1212156(50084186, +), CAediting_1212157(50084208, +), CAediting_1212158(50084213, +), CAediting_1212159(50084215, +), CAediting_1212160(50084258, +), CAediting_1212161(50084646, +), CAediting_1212162(50084662, +), CAediting_1212163(50084664, +), CAediting_1212164(50084665, +), CAediting_1212165(50084671, +), CAediting_1212166(50084686, +), CAediting_1212167(50084687, +), CAediting_1212168(50084691, +), CAediting_1212169(50084710, +), CAediting_1212170(50084719, +), CAediting_1212171(50084734, +), CAediting_1212172(50084737, +), CAediting_1212173(50084738, +), CAediting_1212174(50084754, +), CAediting_1212175(50084758, +), CAediting_1212176(50084760, +), CAediting_1212177(50084762, +), CAediting_1212178(50084767, +), CAediting_1212179(50084771, +), CAediting_1212180(50084774, +), CAediting_1212181(50084800, +), CAediting_1212182(50084804, +), CAediting_1212183(50084817, +), CAediting_1212184(50084821, +), CAediting_1212185(50084824, +), CAediting_1212186(50084826, +), CAediting_1212187(50084827, +), CAediting_1212188(50084830, +), CAediting_1212189(50084903, +), CAediting_1212190(50084924, +), CAediting_1212191(50084957, +), CAediting_1212192(50085027, +), CAediting_1212193(50085055, +), CAediting_1212194(50085081, +), CAediting_1212195(50085082, +), CAediting_1212196(50085087, +), CAediting_1212197(50085091, +), CAediting_1212198(50085095, +), CAediting_1212199(50085104, +), CAediting_1212200(50085108, +), CAediting_1212201(50085111, +), CAediting_1212202(50085114, +), CAediting_1212203(50085127, +), CAediting_1212204(50085213, +), CAediting_1212205(50085215, +), CAediting_1212206(50085217, +), CAediting_1212207(50085220, +), CAediting_1212208(50085391, +), CAediting_1212209(50085409, +), CAediting_1212210(50085410, +), CAediting_1212211(50085436, +), CAediting_1212212(50085455, +), CAediting_1212213(50085464, +), CAediting_1212214(50085479, +), CAediting_1212215(50085488, +), CAediting_1212216(50085489, +), CAediting_1212217(50085503, +), CAediting_1212218(50085508, +), CAediting_1212219(50085510, +), CAediting_1212220(50085512, +), CAediting_1212221(50085513, +), CAediting_1212222(50085514, +), CAediting_1212223(50085517, +), CAediting_1212224(50085537, +), CAediting_1212225(50085549, +), CAediting_1212226(50085557, +), CAediting_1212227(50085566, +), CAediting_1212228(50085584, +), CAediting_1212229(50085648, +), CAediting_1212230(50085649, +), CAediting_1212231(50085676, +), CAediting_1212232(50085683, +), CAediting_1212233(50085708, +), CAediting_1212234(50085713, +), CAediting_1212235(50085715, +), CAediting_1212236(50086266, +), CAediting_1212237(50086415, +), CAediting_1212238(50086417, +), CAediting_1212239(50086427, +), CAediting_1212240(50086433, +), CAediting_1212241(50086434, +), CAediting_1212242(50086439, +), CAediting_1212243(50086442, +), CAediting_1212244(50086456, +), CAediting_1212245(50086488, +), CAediting_1212246(50086502, +), CAediting_1212247(50086513, +), CAediting_1212248(50086524, +), CAediting_1212249(50086527, +), CAediting_1212250(50086530, +), CAediting_1212251(50086533, +), CAediting_1212252(50086535, +), CAediting_1212253(50086538, +), CAediting_1212254(50086542, +), CAediting_1212255(50086567, +), CAediting_1212256(50086568, +), CAediting_1212257(50086569, +), CAediting_1212258(50086595, +), CAediting_1212259(50086601, +), CAediting_1212260(50086610, +), CAediting_1212261(50086621, +), CAediting_1212262(50086671, +), CAediting_1212263(50086676, +), CAediting_1212264(50086677, +), CAediting_1212265(50086798, +), CAediting_1212266(50086820, +), CAediting_1212267(50086833, +), CAediting_1212268(50086852, +), CAediting_1212269(50086863, +), CAediting_1212270(50086891, +), CAediting_1212271(50086893, +), CAediting_1212272(50086897, +), CAediting_1212273(50086905, +), CAediting_1212274(50086909, +), CAediting_1212275(50086916, +), CAediting_1212276(50086931, +), CAediting_1212277(50086932, +), CAediting_1212278(50086937, +), CAediting_1212279(50086941, +), CAediting_1212280(50086958, +), CAediting_1212281(50086964, +), CAediting_1212282(50087039, +), CAediting_1212283(50087042, +), CAediting_1212284(50087071, +), CAediting_1212285(50088017, +),

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RNA editing positional annotations for ITGA3 using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_1211906	chr17_50059125_+	ncRNA_intronic
CAediting_1211907	chr17_50062060_+	ncRNA_intronic
CAediting_1211908	chr17_50065779_+	ncRNA_exonic
CAediting_1211909	chr17_50065784_+	ncRNA_exonic
CAediting_1211910	chr17_50065822_+	ncRNA_exonic
CAediting_1211911	chr17_50065824_+	ncRNA_exonic
CAediting_1211912	chr17_50065825_+	ncRNA_exonic
CAediting_1211913	chr17_50065854_+	ncRNA_exonic
CAediting_1211914	chr17_50065885_+	ncRNA_exonic
CAediting_1211915	chr17_50065929_+	ncRNA_exonic
CAediting_1211916	chr17_50065939_+	ncRNA_exonic
CAediting_1211917	chr17_50065945_+	ncRNA_exonic
CAediting_1211918	chr17_50065953_+	ncRNA_exonic
CAediting_1211919	chr17_50065954_+	ncRNA_exonic
CAediting_1211920	chr17_50065961_+	ncRNA_exonic
CAediting_1211921	chr17_50065978_+	ncRNA_exonic
CAediting_1211922	chr17_50065982_+	ncRNA_exonic
CAediting_1211923	chr17_50065983_+	ncRNA_exonic
CAediting_1211924	chr17_50065988_+	ncRNA_exonic
CAediting_1211925	chr17_50066082_+	ncRNA_intronic
CAediting_1211926	chr17_50066093_+	ncRNA_intronic
CAediting_1211927	chr17_50066098_+	ncRNA_intronic
CAediting_1211928	chr17_50066103_+	ncRNA_intronic
CAediting_1211929	chr17_50066108_+	ncRNA_intronic
CAediting_1211930	chr17_50066122_+	ncRNA_intronic
CAediting_1211931	chr17_50066128_+	ncRNA_intronic
CAediting_1211932	chr17_50066129_+	ncRNA_intronic
CAediting_1211933	chr17_50066177_+	ncRNA_intronic
CAediting_1211934	chr17_50066181_+	ncRNA_intronic
CAediting_1211935	chr17_50066183_+	ncRNA_intronic
CAediting_1211936	chr17_50066191_+	ncRNA_intronic
CAediting_1211937	chr17_50066203_+	ncRNA_intronic
CAediting_1211938	chr17_50066214_+	ncRNA_intronic
CAediting_1211939	chr17_50066216_+	ncRNA_intronic
CAediting_1211940	chr17_50066229_+	ncRNA_intronic
CAediting_1211941	chr17_50066233_+	ncRNA_intronic
CAediting_1211942	chr17_50066268_+	ncRNA_intronic
CAediting_1211943	chr17_50066345_+	ncRNA_intronic
CAediting_1211944	chr17_50066360_+	ncRNA_intronic
CAediting_1211945	chr17_50066466_+	ncRNA_intronic
CAediting_1211946	chr17_50066539_+	ncRNA_intronic
CAediting_1211947	chr17_50066546_+	ncRNA_intronic
CAediting_1211948	chr17_50066580_+	ncRNA_intronic
CAediting_1211949	chr17_50066589_+	ncRNA_intronic
CAediting_1211950	chr17_50066671_+	ncRNA_intronic
CAediting_1211951	chr17_50066690_+	ncRNA_intronic
CAediting_1211952	chr17_50066695_+	ncRNA_intronic
CAediting_1211953	chr17_50066696_+	ncRNA_intronic
CAediting_1211954	chr17_50066725_+	ncRNA_intronic
CAediting_1211955	chr17_50066730_+	ncRNA_intronic
CAediting_1211956	chr17_50067412_+	ncRNA_intronic
CAediting_1211957	chr17_50068532_+	ncRNA_intronic
CAediting_1211958	chr17_50068535_+	ncRNA_intronic
CAediting_1211959	chr17_50068540_+	ncRNA_intronic
CAediting_1211960	chr17_50068564_+	ncRNA_intronic
CAediting_1211961	chr17_50068595_+	ncRNA_intronic
CAediting_1211962	chr17_50068601_+	ncRNA_intronic
CAediting_1211963	chr17_50068631_+	ncRNA_intronic
CAediting_1211964	chr17_50068635_+	ncRNA_intronic
CAediting_1211965	chr17_50068638_+	ncRNA_intronic
CAediting_1211966	chr17_50068643_+	ncRNA_intronic
CAediting_1211967	chr17_50068668_+	ncRNA_intronic
CAediting_1211968	chr17_50068685_+	ncRNA_intronic
CAediting_1211969	chr17_50068702_+	ncRNA_intronic
CAediting_1211970	chr17_50068711_+	ncRNA_intronic
CAediting_1211971	chr17_50068716_+	ncRNA_intronic
CAediting_1211972	chr17_50068740_+	ncRNA_intronic
CAediting_1211973	chr17_50068741_+	ncRNA_intronic
CAediting_1211974	chr17_50068867_+	ncRNA_intronic
CAediting_1211975	chr17_50068977_+	ncRNA_intronic
CAediting_1211976	chr17_50068989_+	ncRNA_intronic
CAediting_1211977	chr17_50069055_+	ncRNA_intronic
CAediting_1211978	chr17_50069110_+	ncRNA_intronic
CAediting_1211979	chr17_50069388_+	ncRNA_intronic
CAediting_1211980	chr17_50069410_+	ncRNA_intronic
CAediting_1211981	chr17_50069417_+	ncRNA_intronic
CAediting_1211982	chr17_50069419_+	ncRNA_intronic
CAediting_1211983	chr17_50069446_+	ncRNA_intronic
CAediting_1211984	chr17_50069470_+	ncRNA_intronic
CAediting_1211985	chr17_50069471_+	ncRNA_intronic
CAediting_1211986	chr17_50069480_+	ncRNA_intronic
CAediting_1211987	chr17_50069504_+	ncRNA_intronic
CAediting_1211988	chr17_50069506_+	ncRNA_intronic
CAediting_1211989	chr17_50069513_+	ncRNA_intronic
CAediting_1211990	chr17_50069514_+	ncRNA_intronic
CAediting_1211991	chr17_50069515_+	ncRNA_intronic
CAediting_1211992	chr17_50069516_+	ncRNA_intronic
CAediting_1211993	chr17_50069519_+	ncRNA_intronic
CAediting_1211994	chr17_50069523_+	ncRNA_intronic
CAediting_1211995	chr17_50069539_+	ncRNA_intronic
CAediting_1211996	chr17_50069551_+	ncRNA_intronic
CAediting_1211997	chr17_50069555_+	ncRNA_intronic
CAediting_1211998	chr17_50069559_+	ncRNA_intronic
CAediting_1211999	chr17_50069607_+	ncRNA_intronic
CAediting_1212000	chr17_50069618_+	ncRNA_intronic
CAediting_1212001	chr17_50069653_+	ncRNA_intronic
CAediting_1212002	chr17_50069654_+	ncRNA_intronic
CAediting_1212003	chr17_50070368_+	ncRNA_intronic
CAediting_1212004	chr17_50070372_+	ncRNA_intronic
CAediting_1212005	chr17_50070374_+	ncRNA_intronic
CAediting_1212006	chr17_50070384_+	ncRNA_intronic
CAediting_1212007	chr17_50070391_+	ncRNA_intronic
CAediting_1212008	chr17_50070460_+	ncRNA_intronic
CAediting_1212009	chr17_50070481_+	ncRNA_intronic
CAediting_1212010	chr17_50070490_+	ncRNA_intronic
CAediting_1212011	chr17_50070499_+	ncRNA_intronic
CAediting_1212012	chr17_50070535_+	ncRNA_intronic
CAediting_1212013	chr17_50070567_+	ncRNA_intronic
CAediting_1212014	chr17_50070575_+	ncRNA_intronic
CAediting_1212015	chr17_50070595_+	ncRNA_intronic
CAediting_1212016	chr17_50070596_+	ncRNA_intronic
CAediting_1212017	chr17_50070601_+	ncRNA_intronic
CAediting_1212018	chr17_50082026_+	ncRNA_intronic
CAediting_1212019	chr17_50082030_+	ncRNA_intronic
CAediting_1212020	chr17_50082038_+	ncRNA_intronic
CAediting_1212021	chr17_50082051_+	ncRNA_intronic
CAediting_1212022	chr17_50082058_+	ncRNA_intronic
CAediting_1212023	chr17_50082074_+	ncRNA_intronic
CAediting_1212024	chr17_50082087_+	ncRNA_intronic
CAediting_1212025	chr17_50082088_+	ncRNA_intronic
CAediting_1212026	chr17_50082090_+	ncRNA_intronic
CAediting_1212027	chr17_50082091_+	ncRNA_intronic
CAediting_1212028	chr17_50082092_+	ncRNA_intronic
CAediting_1212029	chr17_50082100_+	ncRNA_intronic
CAediting_1212030	chr17_50082105_+	ncRNA_intronic
CAediting_1212031	chr17_50082114_+	ncRNA_intronic
CAediting_1212032	chr17_50082117_+	ncRNA_intronic
CAediting_1212033	chr17_50082122_+	ncRNA_intronic
CAediting_1212034	chr17_50082127_+	ncRNA_intronic
CAediting_1212035	chr17_50082129_+	ncRNA_intronic
CAediting_1212036	chr17_50082143_+	ncRNA_intronic
CAediting_1212037	chr17_50082153_+	ncRNA_intronic
CAediting_1212038	chr17_50082206_+	ncRNA_intronic
CAediting_1212039	chr17_50082208_+	ncRNA_intronic
CAediting_1212040	chr17_50082218_+	ncRNA_intronic
CAediting_1212041	chr17_50082229_+	ncRNA_intronic
CAediting_1212042	chr17_50082259_+	ncRNA_intronic
CAediting_1212043	chr17_50082278_+	ncRNA_intronic
CAediting_1212044	chr17_50082283_+	ncRNA_intronic
CAediting_1212045	chr17_50082305_+	ncRNA_intronic
CAediting_1212046	chr17_50082308_+	ncRNA_intronic
CAediting_1212047	chr17_50082318_+	ncRNA_intronic
CAediting_1212048	chr17_50082320_+	ncRNA_intronic
CAediting_1212049	chr17_50082331_+	ncRNA_intronic
CAediting_1212050	chr17_50082344_+	ncRNA_intronic
CAediting_1212051	chr17_50082359_+	ncRNA_intronic
CAediting_1212052	chr17_50082362_+	ncRNA_intronic
CAediting_1212053	chr17_50082376_+	ncRNA_intronic
CAediting_1212054	chr17_50082384_+	ncRNA_intronic
CAediting_1212055	chr17_50082420_+	ncRNA_intronic
CAediting_1212056	chr17_50082437_+	ncRNA_intronic
CAediting_1212057	chr17_50082438_+	ncRNA_intronic
CAediting_1212058	chr17_50082439_+	ncRNA_intronic
CAediting_1212059	chr17_50082451_+	ncRNA_intronic
CAediting_1212060	chr17_50082453_+	ncRNA_intronic
CAediting_1212061	chr17_50082457_+	ncRNA_intronic
CAediting_1212062	chr17_50082486_+	ncRNA_intronic
CAediting_1212063	chr17_50082492_+	ncRNA_intronic
CAediting_1212064	chr17_50082495_+	ncRNA_intronic
CAediting_1212065	chr17_50082499_+	ncRNA_intronic
CAediting_1212066	chr17_50082502_+	ncRNA_intronic
CAediting_1212067	chr17_50082509_+	ncRNA_intronic
CAediting_1212068	chr17_50082521_+	ncRNA_intronic
CAediting_1212069	chr17_50082546_+	ncRNA_intronic
CAediting_1212070	chr17_50082547_+	ncRNA_intronic
CAediting_1212071	chr17_50082550_+	ncRNA_intronic
CAediting_1212072	chr17_50082559_+	ncRNA_intronic
CAediting_1212073	chr17_50082564_+	ncRNA_intronic
CAediting_1212074	chr17_50082572_+	ncRNA_intronic
CAediting_1212075	chr17_50082573_+	ncRNA_intronic
CAediting_1212076	chr17_50082574_+	ncRNA_intronic
CAediting_1212077	chr17_50082575_+	ncRNA_intronic
CAediting_1212078	chr17_50082577_+	ncRNA_intronic
CAediting_1212079	chr17_50082586_+	ncRNA_intronic
CAediting_1212080	chr17_50082588_+	ncRNA_intronic
CAediting_1212081	chr17_50082592_+	ncRNA_intronic
CAediting_1212082	chr17_50082604_+	ncRNA_intronic
CAediting_1212083	chr17_50083450_+	ncRNA_intronic
CAediting_1212084	chr17_50083468_+	ncRNA_intronic
CAediting_1212085	chr17_50083469_+	ncRNA_intronic
CAediting_1212086	chr17_50083474_+	ncRNA_intronic
CAediting_1212087	chr17_50083486_+	ncRNA_intronic
CAediting_1212088	chr17_50083490_+	ncRNA_intronic
CAediting_1212089	chr17_50083494_+	ncRNA_intronic
CAediting_1212090	chr17_50083498_+	ncRNA_intronic
CAediting_1212091	chr17_50083513_+	ncRNA_intronic
CAediting_1212092	chr17_50083516_+	ncRNA_intronic
CAediting_1212093	chr17_50083536_+	ncRNA_intronic
CAediting_1212094	chr17_50083537_+	ncRNA_intronic
CAediting_1212095	chr17_50083552_+	ncRNA_intronic
CAediting_1212096	chr17_50083564_+	ncRNA_intronic
CAediting_1212097	chr17_50083566_+	ncRNA_intronic
CAediting_1212098	chr17_50083567_+	ncRNA_intronic
CAediting_1212099	chr17_50083568_+	ncRNA_intronic
CAediting_1212100	chr17_50083571_+	ncRNA_intronic
CAediting_1212101	chr17_50083573_+	ncRNA_intronic
CAediting_1212102	chr17_50083574_+	ncRNA_intronic
CAediting_1212103	chr17_50083577_+	ncRNA_intronic
CAediting_1212104	chr17_50083595_+	ncRNA_intronic
CAediting_1212105	chr17_50083597_+	ncRNA_intronic
CAediting_1212106	chr17_50083603_+	ncRNA_intronic
CAediting_1212107	chr17_50083609_+	ncRNA_intronic
CAediting_1212108	chr17_50083620_+	ncRNA_intronic
CAediting_1212109	chr17_50083626_+	ncRNA_intronic
CAediting_1212110	chr17_50083633_+	ncRNA_intronic
CAediting_1212111	chr17_50083635_+	ncRNA_intronic
CAediting_1212112	chr17_50083636_+	ncRNA_intronic
CAediting_1212113	chr17_50083649_+	ncRNA_intronic
CAediting_1212114	chr17_50083679_+	ncRNA_intronic
CAediting_1212115	chr17_50083684_+	ncRNA_intronic
CAediting_1212116	chr17_50083706_+	ncRNA_intronic
CAediting_1212117	chr17_50083975_+	ncRNA_intronic
CAediting_1212118	chr17_50083981_+	ncRNA_intronic
CAediting_1212119	chr17_50083982_+	ncRNA_intronic
CAediting_1212120	chr17_50083987_+	ncRNA_intronic
CAediting_1212121	chr17_50083990_+	ncRNA_intronic
CAediting_1212122	chr17_50083995_+	ncRNA_intronic
CAediting_1212123	chr17_50083998_+	ncRNA_intronic
CAediting_1212124	chr17_50084003_+	ncRNA_intronic
CAediting_1212125	chr17_50084004_+	ncRNA_intronic
CAediting_1212126	chr17_50084048_+	ncRNA_intronic
CAediting_1212127	chr17_50084050_+	ncRNA_intronic
CAediting_1212128	chr17_50084057_+	ncRNA_intronic
CAediting_1212129	chr17_50084058_+	ncRNA_intronic
CAediting_1212130	chr17_50084063_+	ncRNA_intronic
CAediting_1212131	chr17_50084069_+	ncRNA_intronic
CAediting_1212132	chr17_50084072_+	ncRNA_intronic
CAediting_1212133	chr17_50084073_+	ncRNA_intronic
CAediting_1212134	chr17_50084074_+	ncRNA_intronic
CAediting_1212135	chr17_50084075_+	ncRNA_intronic
CAediting_1212136	chr17_50084076_+	ncRNA_intronic
CAediting_1212137	chr17_50084078_+	ncRNA_intronic
CAediting_1212138	chr17_50084081_+	ncRNA_intronic
CAediting_1212139	chr17_50084082_+	ncRNA_intronic
CAediting_1212140	chr17_50084083_+	ncRNA_intronic
CAediting_1212141	chr17_50084087_+	ncRNA_intronic
CAediting_1212142	chr17_50084088_+	ncRNA_intronic
CAediting_1212143	chr17_50084113_+	ncRNA_intronic
CAediting_1212144	chr17_50084114_+	ncRNA_intronic
CAediting_1212145	chr17_50084123_+	ncRNA_intronic
CAediting_1212146	chr17_50084127_+	ncRNA_intronic
CAediting_1212147	chr17_50084130_+	ncRNA_intronic
CAediting_1212148	chr17_50084136_+	ncRNA_intronic
CAediting_1212149	chr17_50084140_+	ncRNA_intronic
CAediting_1212150	chr17_50084142_+	ncRNA_intronic
CAediting_1212151	chr17_50084143_+	ncRNA_intronic
CAediting_1212152	chr17_50084154_+	ncRNA_intronic
CAediting_1212153	chr17_50084155_+	ncRNA_intronic
CAediting_1212154	chr17_50084160_+	ncRNA_intronic
CAediting_1212155	chr17_50084181_+	ncRNA_intronic
CAediting_1212156	chr17_50084186_+	ncRNA_intronic
CAediting_1212157	chr17_50084208_+	ncRNA_intronic
CAediting_1212158	chr17_50084213_+	ncRNA_intronic
CAediting_1212159	chr17_50084215_+	ncRNA_intronic
CAediting_1212160	chr17_50084258_+	ncRNA_intronic
CAediting_1212161	chr17_50084646_+	ncRNA_intronic
CAediting_1212162	chr17_50084662_+	ncRNA_intronic
CAediting_1212163	chr17_50084664_+	ncRNA_intronic
CAediting_1212164	chr17_50084665_+	ncRNA_intronic
CAediting_1212165	chr17_50084671_+	ncRNA_intronic
CAediting_1212166	chr17_50084686_+	ncRNA_intronic
CAediting_1212167	chr17_50084687_+	ncRNA_intronic
CAediting_1212168	chr17_50084691_+	ncRNA_intronic
CAediting_1212169	chr17_50084710_+	ncRNA_intronic
CAediting_1212170	chr17_50084719_+	ncRNA_intronic
CAediting_1212171	chr17_50084734_+	ncRNA_intronic
CAediting_1212172	chr17_50084737_+	ncRNA_intronic
CAediting_1212173	chr17_50084738_+	ncRNA_intronic
CAediting_1212174	chr17_50084754_+	ncRNA_intronic
CAediting_1212175	chr17_50084758_+	ncRNA_intronic
CAediting_1212176	chr17_50084760_+	ncRNA_intronic
CAediting_1212177	chr17_50084762_+	ncRNA_intronic
CAediting_1212178	chr17_50084767_+	ncRNA_intronic
CAediting_1212179	chr17_50084771_+	ncRNA_intronic
CAediting_1212180	chr17_50084774_+	ncRNA_intronic
CAediting_1212181	chr17_50084800_+	ncRNA_intronic
CAediting_1212182	chr17_50084804_+	ncRNA_intronic
CAediting_1212183	chr17_50084817_+	ncRNA_intronic
CAediting_1212184	chr17_50084821_+	ncRNA_intronic
CAediting_1212185	chr17_50084824_+	ncRNA_intronic
CAediting_1212186	chr17_50084826_+	ncRNA_intronic
CAediting_1212187	chr17_50084827_+	ncRNA_intronic
CAediting_1212188	chr17_50084830_+	ncRNA_intronic
CAediting_1212189	chr17_50084903_+	ncRNA_intronic
CAediting_1212190	chr17_50084924_+	ncRNA_intronic
CAediting_1212191	chr17_50084957_+	ncRNA_intronic
CAediting_1212192	chr17_50085027_+	ncRNA_intronic
CAediting_1212193	chr17_50085055_+	ncRNA_intronic
CAediting_1212194	chr17_50085081_+	ncRNA_intronic
CAediting_1212195	chr17_50085082_+	ncRNA_intronic
CAediting_1212196	chr17_50085087_+	ncRNA_intronic
CAediting_1212197	chr17_50085091_+	ncRNA_intronic
CAediting_1212198	chr17_50085095_+	ncRNA_intronic
CAediting_1212199	chr17_50085104_+	ncRNA_intronic
CAediting_1212200	chr17_50085108_+	ncRNA_intronic
CAediting_1212201	chr17_50085111_+	ncRNA_intronic
CAediting_1212202	chr17_50085114_+	ncRNA_intronic
CAediting_1212203	chr17_50085127_+	ncRNA_intronic
CAediting_1212204	chr17_50085213_+	ncRNA_intronic
CAediting_1212205	chr17_50085215_+	ncRNA_intronic
CAediting_1212206	chr17_50085217_+	ncRNA_intronic
CAediting_1212207	chr17_50085220_+	ncRNA_intronic
CAediting_1212208	chr17_50085391_+	ncRNA_intronic
CAediting_1212209	chr17_50085409_+	ncRNA_intronic
CAediting_1212210	chr17_50085410_+	ncRNA_intronic
CAediting_1212211	chr17_50085436_+	ncRNA_intronic
CAediting_1212212	chr17_50085455_+	ncRNA_intronic
CAediting_1212213	chr17_50085464_+	ncRNA_intronic
CAediting_1212214	chr17_50085479_+	ncRNA_intronic
CAediting_1212215	chr17_50085488_+	ncRNA_intronic
CAediting_1212216	chr17_50085489_+	ncRNA_intronic
CAediting_1212217	chr17_50085503_+	ncRNA_intronic
CAediting_1212218	chr17_50085508_+	ncRNA_intronic
CAediting_1212219	chr17_50085510_+	ncRNA_intronic
CAediting_1212220	chr17_50085512_+	ncRNA_intronic
CAediting_1212221	chr17_50085513_+	ncRNA_intronic
CAediting_1212222	chr17_50085514_+	ncRNA_intronic
CAediting_1212223	chr17_50085517_+	ncRNA_intronic
CAediting_1212224	chr17_50085537_+	ncRNA_intronic
CAediting_1212225	chr17_50085549_+	ncRNA_intronic
CAediting_1212226	chr17_50085557_+	ncRNA_intronic
CAediting_1212227	chr17_50085566_+	ncRNA_intronic
CAediting_1212228	chr17_50085584_+	ncRNA_intronic
CAediting_1212229	chr17_50085648_+	ncRNA_intronic
CAediting_1212230	chr17_50085649_+	ncRNA_intronic
CAediting_1212231	chr17_50085676_+	ncRNA_intronic
CAediting_1212232	chr17_50085683_+	ncRNA_intronic
CAediting_1212233	chr17_50085708_+	ncRNA_intronic
CAediting_1212234	chr17_50085713_+	ncRNA_intronic
CAediting_1212235	chr17_50085715_+	ncRNA_intronic
CAediting_1212236	chr17_50086266_+	ncRNA_intronic
CAediting_1212237	chr17_50086415_+	ncRNA_exonic
CAediting_1212238	chr17_50086417_+	ncRNA_exonic
CAediting_1212239	chr17_50086427_+	ncRNA_exonic
CAediting_1212240	chr17_50086433_+	ncRNA_exonic
CAediting_1212241	chr17_50086434_+	ncRNA_exonic
CAediting_1212242	chr17_50086439_+	ncRNA_exonic
CAediting_1212243	chr17_50086442_+	ncRNA_exonic
CAediting_1212244	chr17_50086456_+	ncRNA_exonic
CAediting_1212245	chr17_50086488_+	ncRNA_exonic
CAediting_1212246	chr17_50086502_+	ncRNA_exonic
CAediting_1212247	chr17_50086513_+	ncRNA_exonic
CAediting_1212248	chr17_50086524_+	ncRNA_exonic
CAediting_1212249	chr17_50086527_+	ncRNA_exonic
CAediting_1212250	chr17_50086530_+	ncRNA_exonic
CAediting_1212251	chr17_50086533_+	ncRNA_exonic
CAediting_1212252	chr17_50086535_+	ncRNA_exonic
CAediting_1212253	chr17_50086538_+	ncRNA_exonic
CAediting_1212254	chr17_50086542_+	ncRNA_exonic
CAediting_1212255	chr17_50086567_+	ncRNA_exonic
CAediting_1212256	chr17_50086568_+	ncRNA_exonic
CAediting_1212257	chr17_50086569_+	ncRNA_exonic
CAediting_1212258	chr17_50086595_+	ncRNA_exonic
CAediting_1212259	chr17_50086601_+	ncRNA_exonic
CAediting_1212260	chr17_50086610_+	ncRNA_exonic
CAediting_1212261	chr17_50086621_+	ncRNA_exonic
CAediting_1212262	chr17_50086671_+	ncRNA_exonic
CAediting_1212263	chr17_50086676_+	ncRNA_exonic
CAediting_1212264	chr17_50086677_+	ncRNA_exonic
CAediting_1212265	chr17_50086798_+	ncRNA_exonic
CAediting_1212266	chr17_50086820_+	ncRNA_exonic
CAediting_1212267	chr17_50086833_+	ncRNA_exonic
CAediting_1212268	chr17_50086852_+	ncRNA_exonic
CAediting_1212269	chr17_50086863_+	ncRNA_exonic
CAediting_1212270	chr17_50086891_+	ncRNA_exonic
CAediting_1212271	chr17_50086893_+	ncRNA_exonic
CAediting_1212272	chr17_50086897_+	ncRNA_exonic
CAediting_1212273	chr17_50086905_+	ncRNA_exonic
CAediting_1212274	chr17_50086909_+	ncRNA_exonic
CAediting_1212275	chr17_50086916_+	ncRNA_exonic
CAediting_1212276	chr17_50086931_+	ncRNA_exonic
CAediting_1212277	chr17_50086932_+	ncRNA_exonic
CAediting_1212278	chr17_50086937_+	ncRNA_exonic
CAediting_1212279	chr17_50086941_+	ncRNA_exonic
CAediting_1212280	chr17_50086958_+	ncRNA_exonic
CAediting_1212281	chr17_50086964_+	ncRNA_exonic
CAediting_1212282	chr17_50087039_+	ncRNA_exonic
CAediting_1212283	chr17_50087042_+	ncRNA_exonic
CAediting_1212284	chr17_50087071_+	ncRNA_exonic
CAediting_1212285	chr17_50088017_+	ncRNA_intronic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_1211907	chr17_50062060_+	SINE	Alu	AluSx
CAediting_1211908	chr17_50065779_+	SINE	Alu	AluSx3
CAediting_1211909	chr17_50065784_+	SINE	Alu	AluSx3
CAediting_1211910	chr17_50065822_+	SINE	Alu	AluSx3
CAediting_1211911	chr17_50065824_+	SINE	Alu	AluSx3
CAediting_1211912	chr17_50065825_+	SINE	Alu	AluSx3
CAediting_1211913	chr17_50065854_+	SINE	Alu	AluSx3
CAediting_1211914	chr17_50065885_+	SINE	Alu	AluSx3
CAediting_1211915	chr17_50065929_+	SINE	Alu	AluSx3
CAediting_1211916	chr17_50065939_+	SINE	Alu	AluSx3
CAediting_1211917	chr17_50065945_+	SINE	Alu	AluSx3
CAediting_1211918	chr17_50065953_+	SINE	Alu	AluSx3
CAediting_1211919	chr17_50065954_+	SINE	Alu	AluSx3
CAediting_1211920	chr17_50065961_+	SINE	Alu	AluSx3
CAediting_1211921	chr17_50065978_+	SINE	Alu	AluSx3
CAediting_1211922	chr17_50065982_+	SINE	Alu	AluSx3
CAediting_1211923	chr17_50065983_+	SINE	Alu	AluSx3
CAediting_1211924	chr17_50065988_+	SINE	Alu	AluSx3
CAediting_1211925	chr17_50066082_+	SINE	Alu	AluJb
CAediting_1211926	chr17_50066093_+	SINE	Alu	AluJb
CAediting_1211927	chr17_50066098_+	SINE	Alu	AluJb
CAediting_1211928	chr17_50066103_+	SINE	Alu	AluJb
CAediting_1211929	chr17_50066108_+	SINE	Alu	AluJb
CAediting_1211930	chr17_50066122_+	SINE	Alu	AluJb
CAediting_1211931	chr17_50066128_+	SINE	Alu	AluJb
CAediting_1211932	chr17_50066129_+	SINE	Alu	AluJb
CAediting_1211933	chr17_50066177_+	SINE	Alu	AluJb
CAediting_1211934	chr17_50066181_+	SINE	Alu	AluJb
CAediting_1211935	chr17_50066183_+	SINE	Alu	AluJb
CAediting_1211936	chr17_50066191_+	SINE	Alu	AluJb
CAediting_1211937	chr17_50066203_+	SINE	Alu	AluJb
CAediting_1211938	chr17_50066214_+	SINE	Alu	AluJb
CAediting_1211939	chr17_50066216_+	SINE	Alu	AluJb
CAediting_1211940	chr17_50066229_+	SINE	Alu	AluJb
CAediting_1211941	chr17_50066233_+	SINE	Alu	AluJb
CAediting_1211942	chr17_50066268_+	SINE	Alu	AluJb
CAediting_1211943	chr17_50066345_+	SINE	Alu	AluJo
CAediting_1211944	chr17_50066360_+	SINE	Alu	AluJo
CAediting_1211945	chr17_50066466_+	SINE	Alu	AluJo
CAediting_1211946	chr17_50066539_+	SINE	Alu	AluJb
CAediting_1211947	chr17_50066546_+	SINE	Alu	AluJb
CAediting_1211948	chr17_50066580_+	SINE	Alu	AluJb
CAediting_1211949	chr17_50066589_+	SINE	Alu	AluJb
CAediting_1211950	chr17_50066671_+	SINE	Alu	AluJb
CAediting_1211951	chr17_50066690_+	SINE	Alu	AluJb
CAediting_1211952	chr17_50066695_+	SINE	Alu	AluJb
CAediting_1211953	chr17_50066696_+	SINE	Alu	AluJb
CAediting_1211954	chr17_50066725_+	SINE	Alu	AluJb
CAediting_1211955	chr17_50066730_+	SINE	Alu	AluJb
CAediting_1211956	chr17_50067412_+	SINE	MIR	MIR
CAediting_1211957	chr17_50068532_+	SINE	Alu	AluJb
CAediting_1211958	chr17_50068535_+	SINE	Alu	AluJb
CAediting_1211959	chr17_50068540_+	SINE	Alu	AluJb
CAediting_1211960	chr17_50068564_+	SINE	Alu	AluJb
CAediting_1211961	chr17_50068595_+	SINE	Alu	AluJb
CAediting_1211962	chr17_50068601_+	SINE	Alu	AluJb
CAediting_1211963	chr17_50068631_+	SINE	Alu	AluJb
CAediting_1211964	chr17_50068635_+	SINE	Alu	AluJb
CAediting_1211965	chr17_50068638_+	SINE	Alu	AluJb
CAediting_1211966	chr17_50068643_+	SINE	Alu	AluJb
CAediting_1211967	chr17_50068668_+	SINE	Alu	AluJb
CAediting_1211968	chr17_50068685_+	SINE	Alu	AluJb
CAediting_1211969	chr17_50068702_+	SINE	Alu	AluJb
CAediting_1211970	chr17_50068711_+	SINE	Alu	AluJb
CAediting_1211971	chr17_50068716_+	SINE	Alu	AluJb
CAediting_1211972	chr17_50068740_+	SINE	Alu	AluJb
CAediting_1211973	chr17_50068741_+	SINE	Alu	AluJb
CAediting_1211974	chr17_50068867_+	SINE	Alu	AluY
CAediting_1211975	chr17_50068977_+	SINE	Alu	AluY
CAediting_1211976	chr17_50068989_+	SINE	Alu	AluY
CAediting_1211977	chr17_50069055_+	SINE	Alu	AluY
CAediting_1211978	chr17_50069110_+	SINE	Alu	AluY
CAediting_1211979	chr17_50069388_+	SINE	Alu	AluJr
CAediting_1211980	chr17_50069410_+	SINE	Alu	AluJr
CAediting_1211981	chr17_50069417_+	SINE	Alu	AluJr
CAediting_1211982	chr17_50069419_+	SINE	Alu	AluJr
CAediting_1211983	chr17_50069446_+	SINE	Alu	AluJr
CAediting_1211984	chr17_50069470_+	SINE	Alu	AluJr
CAediting_1211985	chr17_50069471_+	SINE	Alu	AluJr
CAediting_1211986	chr17_50069480_+	SINE	Alu	AluJr
CAediting_1211987	chr17_50069504_+	SINE	Alu	AluJr
CAediting_1211988	chr17_50069506_+	SINE	Alu	AluJr
CAediting_1211989	chr17_50069513_+	SINE	Alu	AluJr
CAediting_1211990	chr17_50069514_+	SINE	Alu	AluJr
CAediting_1211991	chr17_50069515_+	SINE	Alu	AluJr
CAediting_1211992	chr17_50069516_+	SINE	Alu	AluJr
CAediting_1211993	chr17_50069519_+	SINE	Alu	AluJr
CAediting_1211994	chr17_50069523_+	SINE	Alu	AluJr
CAediting_1211995	chr17_50069539_+	SINE	Alu	AluJr
CAediting_1211996	chr17_50069551_+	SINE	Alu	AluJr
CAediting_1211997	chr17_50069555_+	SINE	Alu	AluJr
CAediting_1211998	chr17_50069559_+	SINE	Alu	AluJr
CAediting_1211999	chr17_50069607_+	SINE	Alu	AluJr
CAediting_1212000	chr17_50069618_+	SINE	Alu	AluJr
CAediting_1212001	chr17_50069653_+	SINE	Alu	AluJr
CAediting_1212002	chr17_50069654_+	SINE	Alu	AluJr
CAediting_1212003	chr17_50070368_+	SINE	Alu	AluSz
CAediting_1212004	chr17_50070372_+	SINE	Alu	AluSz
CAediting_1212005	chr17_50070374_+	SINE	Alu	AluSz
CAediting_1212006	chr17_50070384_+	SINE	Alu	AluSz
CAediting_1212007	chr17_50070391_+	SINE	Alu	AluSz
CAediting_1212008	chr17_50070460_+	SINE	Alu	AluSz
CAediting_1212009	chr17_50070481_+	SINE	Alu	AluSz
CAediting_1212010	chr17_50070490_+	SINE	Alu	AluSz
CAediting_1212011	chr17_50070499_+	SINE	Alu	AluSz
CAediting_1212012	chr17_50070535_+	SINE	Alu	AluSz
CAediting_1212013	chr17_50070567_+	SINE	Alu	AluSz
CAediting_1212014	chr17_50070575_+	SINE	Alu	AluSz
CAediting_1212015	chr17_50070595_+	SINE	Alu	AluSz
CAediting_1212016	chr17_50070596_+	SINE	Alu	AluSz
CAediting_1212017	chr17_50070601_+	SINE	Alu	AluSz
CAediting_1212018	chr17_50082026_+	SINE	Alu	AluJr
CAediting_1212019	chr17_50082030_+	SINE	Alu	AluJr
CAediting_1212020	chr17_50082038_+	SINE	Alu	AluJr
CAediting_1212021	chr17_50082051_+	SINE	Alu	AluJr
CAediting_1212022	chr17_50082058_+	SINE	Alu	AluJr
CAediting_1212023	chr17_50082074_+	SINE	Alu	AluJr
CAediting_1212024	chr17_50082087_+	SINE	Alu	AluJr
CAediting_1212025	chr17_50082088_+	SINE	Alu	AluJr
CAediting_1212026	chr17_50082090_+	SINE	Alu	AluJr
CAediting_1212027	chr17_50082091_+	SINE	Alu	AluJr
CAediting_1212028	chr17_50082092_+	SINE	Alu	AluJr
CAediting_1212029	chr17_50082100_+	SINE	Alu	AluJr
CAediting_1212030	chr17_50082105_+	SINE	Alu	AluJr
CAediting_1212031	chr17_50082114_+	SINE	Alu	AluJr
CAediting_1212032	chr17_50082117_+	SINE	Alu	AluJr
CAediting_1212033	chr17_50082122_+	SINE	Alu	AluJr
CAediting_1212034	chr17_50082127_+	SINE	Alu	AluJr
CAediting_1212035	chr17_50082129_+	SINE	Alu	AluJr
CAediting_1212036	chr17_50082143_+	SINE	Alu	AluJr
CAediting_1212037	chr17_50082153_+	SINE	Alu	AluJr
CAediting_1212038	chr17_50082206_+	SINE	Alu	AluY
CAediting_1212039	chr17_50082208_+	SINE	Alu	AluY
CAediting_1212040	chr17_50082218_+	SINE	Alu	AluY
CAediting_1212041	chr17_50082229_+	SINE	Alu	AluY
CAediting_1212042	chr17_50082259_+	SINE	Alu	AluY
CAediting_1212043	chr17_50082278_+	SINE	Alu	AluY
CAediting_1212044	chr17_50082283_+	SINE	Alu	AluY
CAediting_1212045	chr17_50082305_+	SINE	Alu	AluY
CAediting_1212046	chr17_50082308_+	SINE	Alu	AluY
CAediting_1212047	chr17_50082318_+	SINE	Alu	AluY
CAediting_1212048	chr17_50082320_+	SINE	Alu	AluY
CAediting_1212049	chr17_50082331_+	SINE	Alu	AluY
CAediting_1212050	chr17_50082344_+	SINE	Alu	AluY
CAediting_1212051	chr17_50082359_+	SINE	Alu	AluY
CAediting_1212052	chr17_50082362_+	SINE	Alu	AluY
CAediting_1212053	chr17_50082376_+	SINE	Alu	AluY
CAediting_1212054	chr17_50082384_+	SINE	Alu	AluY
CAediting_1212055	chr17_50082420_+	SINE	Alu	AluY
CAediting_1212056	chr17_50082437_+	SINE	Alu	AluY
CAediting_1212057	chr17_50082438_+	SINE	Alu	AluY
CAediting_1212058	chr17_50082439_+	SINE	Alu	AluY
CAediting_1212059	chr17_50082451_+	SINE	Alu	AluY
CAediting_1212060	chr17_50082453_+	SINE	Alu	AluY
CAediting_1212061	chr17_50082457_+	SINE	Alu	AluY
CAediting_1212062	chr17_50082486_+	SINE	Alu	AluJr
CAediting_1212063	chr17_50082492_+	SINE	Alu	AluJr
CAediting_1212064	chr17_50082495_+	SINE	Alu	AluJr
CAediting_1212065	chr17_50082499_+	SINE	Alu	AluJr
CAediting_1212066	chr17_50082502_+	SINE	Alu	AluJr
CAediting_1212067	chr17_50082509_+	SINE	Alu	AluJr
CAediting_1212068	chr17_50082521_+	SINE	Alu	AluJr
CAediting_1212069	chr17_50082546_+	SINE	Alu	AluJr
CAediting_1212070	chr17_50082547_+	SINE	Alu	AluJr
CAediting_1212071	chr17_50082550_+	SINE	Alu	AluJr
CAediting_1212072	chr17_50082559_+	SINE	Alu	AluJr
CAediting_1212073	chr17_50082564_+	SINE	Alu	AluJr
CAediting_1212074	chr17_50082572_+	SINE	Alu	AluJr
CAediting_1212075	chr17_50082573_+	SINE	Alu	AluJr
CAediting_1212076	chr17_50082574_+	SINE	Alu	AluJr
CAediting_1212077	chr17_50082575_+	SINE	Alu	AluJr
CAediting_1212078	chr17_50082577_+	SINE	Alu	AluJr
CAediting_1212079	chr17_50082586_+	SINE	Alu	AluJr
CAediting_1212080	chr17_50082588_+	SINE	Alu	AluJr
CAediting_1212081	chr17_50082592_+	SINE	Alu	AluJr
CAediting_1212082	chr17_50082604_+	SINE	Alu	AluJr
CAediting_1212083	chr17_50083450_+	SINE	Alu	AluJb
CAediting_1212084	chr17_50083468_+	SINE	Alu	AluJb
CAediting_1212085	chr17_50083469_+	SINE	Alu	AluJb
CAediting_1212086	chr17_50083474_+	SINE	Alu	AluJb
CAediting_1212087	chr17_50083486_+	SINE	Alu	AluJb
CAediting_1212088	chr17_50083490_+	SINE	Alu	AluJb
CAediting_1212089	chr17_50083494_+	SINE	Alu	AluJb
CAediting_1212090	chr17_50083498_+	SINE	Alu	AluJb
CAediting_1212091	chr17_50083513_+	SINE	Alu	AluJb
CAediting_1212092	chr17_50083516_+	SINE	Alu	AluJb
CAediting_1212093	chr17_50083536_+	SINE	Alu	AluJb
CAediting_1212094	chr17_50083537_+	SINE	Alu	AluJb
CAediting_1212095	chr17_50083552_+	SINE	Alu	AluJb
CAediting_1212096	chr17_50083564_+	SINE	Alu	AluJb
CAediting_1212097	chr17_50083566_+	SINE	Alu	AluJb
CAediting_1212098	chr17_50083567_+	SINE	Alu	AluJb
CAediting_1212099	chr17_50083568_+	SINE	Alu	AluJb
CAediting_1212100	chr17_50083571_+	SINE	Alu	AluJb
CAediting_1212101	chr17_50083573_+	SINE	Alu	AluJb
CAediting_1212102	chr17_50083574_+	SINE	Alu	AluJb
CAediting_1212103	chr17_50083577_+	SINE	Alu	AluJb
CAediting_1212104	chr17_50083595_+	SINE	Alu	AluJb
CAediting_1212105	chr17_50083597_+	SINE	Alu	AluJb
CAediting_1212106	chr17_50083603_+	SINE	Alu	AluJb
CAediting_1212107	chr17_50083609_+	SINE	Alu	AluJb
CAediting_1212108	chr17_50083620_+	SINE	Alu	AluJb
CAediting_1212109	chr17_50083626_+	SINE	Alu	AluJb
CAediting_1212110	chr17_50083633_+	SINE	Alu	AluJb
CAediting_1212111	chr17_50083635_+	SINE	Alu	AluJb
CAediting_1212112	chr17_50083636_+	SINE	Alu	AluJb
CAediting_1212113	chr17_50083649_+	SINE	Alu	AluJb
CAediting_1212114	chr17_50083679_+	SINE	Alu	AluJb
CAediting_1212115	chr17_50083684_+	SINE	Alu	AluJb
CAediting_1212116	chr17_50083706_+	SINE	Alu	AluJb
CAediting_1212117	chr17_50083975_+	SINE	Alu	AluSz
CAediting_1212118	chr17_50083981_+	SINE	Alu	AluSz
CAediting_1212119	chr17_50083982_+	SINE	Alu	AluSz
CAediting_1212120	chr17_50083987_+	SINE	Alu	AluSz
CAediting_1212121	chr17_50083990_+	SINE	Alu	AluSz
CAediting_1212122	chr17_50083995_+	SINE	Alu	AluSz
CAediting_1212123	chr17_50083998_+	SINE	Alu	AluSz
CAediting_1212124	chr17_50084003_+	SINE	Alu	AluSz
CAediting_1212125	chr17_50084004_+	SINE	Alu	AluSz
CAediting_1212126	chr17_50084048_+	SINE	Alu	AluSz
CAediting_1212127	chr17_50084050_+	SINE	Alu	AluSz
CAediting_1212128	chr17_50084057_+	SINE	Alu	AluSz
CAediting_1212129	chr17_50084058_+	SINE	Alu	AluSz
CAediting_1212130	chr17_50084063_+	SINE	Alu	AluSz
CAediting_1212131	chr17_50084069_+	SINE	Alu	AluSz
CAediting_1212132	chr17_50084072_+	SINE	Alu	AluSz
CAediting_1212133	chr17_50084073_+	SINE	Alu	AluSz
CAediting_1212134	chr17_50084074_+	SINE	Alu	AluSz
CAediting_1212135	chr17_50084075_+	SINE	Alu	AluSz
CAediting_1212136	chr17_50084076_+	SINE	Alu	AluSz
CAediting_1212137	chr17_50084078_+	SINE	Alu	AluSz
CAediting_1212138	chr17_50084081_+	SINE	Alu	AluSz
CAediting_1212139	chr17_50084082_+	SINE	Alu	AluSz
CAediting_1212140	chr17_50084083_+	SINE	Alu	AluSz
CAediting_1212141	chr17_50084087_+	SINE	Alu	AluSz
CAediting_1212142	chr17_50084088_+	SINE	Alu	AluSz
CAediting_1212143	chr17_50084113_+	SINE	Alu	AluSz
CAediting_1212144	chr17_50084114_+	SINE	Alu	AluSz
CAediting_1212145	chr17_50084123_+	SINE	Alu	AluSz
CAediting_1212146	chr17_50084127_+	SINE	Alu	AluSz
CAediting_1212147	chr17_50084130_+	SINE	Alu	AluSz
CAediting_1212148	chr17_50084136_+	SINE	Alu	AluSz
CAediting_1212149	chr17_50084140_+	SINE	Alu	AluSz
CAediting_1212150	chr17_50084142_+	SINE	Alu	AluSz
CAediting_1212151	chr17_50084143_+	SINE	Alu	AluSz
CAediting_1212152	chr17_50084154_+	SINE	Alu	AluSz
CAediting_1212153	chr17_50084155_+	SINE	Alu	AluSz
CAediting_1212154	chr17_50084160_+	SINE	Alu	AluSz
CAediting_1212155	chr17_50084181_+	SINE	Alu	AluSz
CAediting_1212156	chr17_50084186_+	SINE	Alu	AluSz
CAediting_1212157	chr17_50084208_+	SINE	Alu	AluSz
CAediting_1212158	chr17_50084213_+	SINE	Alu	AluSz
CAediting_1212159	chr17_50084215_+	SINE	Alu	AluSz
CAediting_1212160	chr17_50084258_+	SINE	Alu	AluSz
CAediting_1212161	chr17_50084646_+	SINE	Alu	AluJo
CAediting_1212162	chr17_50084662_+	SINE	Alu	AluJo
CAediting_1212163	chr17_50084664_+	SINE	Alu	AluJo
CAediting_1212164	chr17_50084665_+	SINE	Alu	AluJo
CAediting_1212165	chr17_50084671_+	SINE	Alu	AluJo
CAediting_1212166	chr17_50084686_+	SINE	Alu	AluJo
CAediting_1212167	chr17_50084687_+	SINE	Alu	AluJo
CAediting_1212168	chr17_50084691_+	SINE	Alu	AluJo
CAediting_1212169	chr17_50084710_+	SINE	Alu	AluJo
CAediting_1212170	chr17_50084719_+	SINE	Alu	AluJo
CAediting_1212171	chr17_50084734_+	SINE	Alu	AluJo
CAediting_1212172	chr17_50084737_+	SINE	Alu	AluJo
CAediting_1212173	chr17_50084738_+	SINE	Alu	AluJo
CAediting_1212174	chr17_50084754_+	SINE	Alu	AluJo
CAediting_1212175	chr17_50084758_+	SINE	Alu	AluJo
CAediting_1212176	chr17_50084760_+	SINE	Alu	AluJo
CAediting_1212177	chr17_50084762_+	SINE	Alu	AluJo
CAediting_1212178	chr17_50084767_+	SINE	Alu	AluJo
CAediting_1212179	chr17_50084771_+	SINE	Alu	AluJo
CAediting_1212180	chr17_50084774_+	SINE	Alu	AluJo
CAediting_1212181	chr17_50084800_+	SINE	Alu	AluJo
CAediting_1212182	chr17_50084804_+	SINE	Alu	AluJo
CAediting_1212183	chr17_50084817_+	SINE	Alu	AluJo
CAediting_1212184	chr17_50084821_+	SINE	Alu	AluJo
CAediting_1212185	chr17_50084824_+	SINE	Alu	AluJo
CAediting_1212186	chr17_50084826_+	SINE	Alu	AluJo
CAediting_1212187	chr17_50084827_+	SINE	Alu	AluJo
CAediting_1212188	chr17_50084830_+	SINE	Alu	AluJo
CAediting_1212189	chr17_50084903_+	SINE	Alu	AluJo
CAediting_1212190	chr17_50084924_+	SINE	Alu	AluJo
CAediting_1212191	chr17_50084957_+	SINE	Alu	AluSx1
CAediting_1212192	chr17_50085027_+	SINE	Alu	AluSx1
CAediting_1212193	chr17_50085055_+	SINE	Alu	AluSx1
CAediting_1212194	chr17_50085081_+	SINE	Alu	AluSx1
CAediting_1212195	chr17_50085082_+	SINE	Alu	AluSx1
CAediting_1212196	chr17_50085087_+	SINE	Alu	AluSx1
CAediting_1212197	chr17_50085091_+	SINE	Alu	AluSx1
CAediting_1212198	chr17_50085095_+	SINE	Alu	AluSx1
CAediting_1212199	chr17_50085104_+	SINE	Alu	AluSx1
CAediting_1212200	chr17_50085108_+	SINE	Alu	AluSx1
CAediting_1212201	chr17_50085111_+	SINE	Alu	AluSx1
CAediting_1212202	chr17_50085114_+	SINE	Alu	AluSx1
CAediting_1212203	chr17_50085127_+	SINE	Alu	AluSx1
CAediting_1212204	chr17_50085213_+	SINE	Alu	AluSx1
CAediting_1212205	chr17_50085215_+	SINE	Alu	AluSx1
CAediting_1212206	chr17_50085217_+	SINE	Alu	AluSx1
CAediting_1212207	chr17_50085220_+	SINE	Alu	AluSx1
CAediting_1212208	chr17_50085391_+	SINE	Alu	AluSq
CAediting_1212209	chr17_50085409_+	SINE	Alu	AluSq
CAediting_1212210	chr17_50085410_+	SINE	Alu	AluSq
CAediting_1212211	chr17_50085436_+	SINE	Alu	AluSq
CAediting_1212212	chr17_50085455_+	SINE	Alu	AluSq
CAediting_1212213	chr17_50085464_+	SINE	Alu	AluSq
CAediting_1212214	chr17_50085479_+	SINE	Alu	AluSq
CAediting_1212215	chr17_50085488_+	SINE	Alu	AluSq
CAediting_1212216	chr17_50085489_+	SINE	Alu	AluSq
CAediting_1212217	chr17_50085503_+	SINE	Alu	AluSq
CAediting_1212218	chr17_50085508_+	SINE	Alu	AluSq
CAediting_1212219	chr17_50085510_+	SINE	Alu	AluSq
CAediting_1212220	chr17_50085512_+	SINE	Alu	AluSq
CAediting_1212221	chr17_50085513_+	SINE	Alu	AluSq
CAediting_1212222	chr17_50085514_+	SINE	Alu	AluSq
CAediting_1212223	chr17_50085517_+	SINE	Alu	AluSq
CAediting_1212224	chr17_50085537_+	SINE	Alu	AluSq
CAediting_1212225	chr17_50085549_+	SINE	Alu	AluSq
CAediting_1212226	chr17_50085557_+	SINE	Alu	AluSq
CAediting_1212227	chr17_50085566_+	SINE	Alu	AluSq
CAediting_1212228	chr17_50085584_+	SINE	Alu	AluSq
CAediting_1212229	chr17_50085648_+	SINE	Alu	AluSq
CAediting_1212230	chr17_50085649_+	SINE	Alu	AluSq
CAediting_1212231	chr17_50085676_+	Simple_repeat	Simple_repeat	(TATATAT)n
CAediting_1212232	chr17_50085683_+	Simple_repeat	Simple_repeat	(TATATAT)n
CAediting_1212233	chr17_50085708_+	Simple_repeat	Simple_repeat	(TATATAT)n
CAediting_1212234	chr17_50085713_+	Simple_repeat	Simple_repeat	(TATATAT)n
CAediting_1212235	chr17_50085715_+	Simple_repeat	Simple_repeat	(TATATAT)n
CAediting_1212237	chr17_50086415_+	SINE	Alu	AluSx
CAediting_1212238	chr17_50086417_+	SINE	Alu	AluSx
CAediting_1212239	chr17_50086427_+	SINE	Alu	AluSx
CAediting_1212240	chr17_50086433_+	SINE	Alu	AluSx
CAediting_1212241	chr17_50086434_+	SINE	Alu	AluSx
CAediting_1212242	chr17_50086439_+	SINE	Alu	AluSx
CAediting_1212243	chr17_50086442_+	SINE	Alu	AluSx
CAediting_1212244	chr17_50086456_+	SINE	Alu	AluSx
CAediting_1212245	chr17_50086488_+	SINE	Alu	AluSx
CAediting_1212246	chr17_50086502_+	SINE	Alu	AluSx
CAediting_1212247	chr17_50086513_+	SINE	Alu	AluSx
CAediting_1212248	chr17_50086524_+	SINE	Alu	AluSx
CAediting_1212249	chr17_50086527_+	SINE	Alu	AluSx
CAediting_1212250	chr17_50086530_+	SINE	Alu	AluSx
CAediting_1212251	chr17_50086533_+	SINE	Alu	AluSx
CAediting_1212252	chr17_50086535_+	SINE	Alu	AluSx
CAediting_1212253	chr17_50086538_+	SINE	Alu	AluSx
CAediting_1212254	chr17_50086542_+	SINE	Alu	AluSx
CAediting_1212255	chr17_50086567_+	SINE	Alu	AluSx
CAediting_1212256	chr17_50086568_+	SINE	Alu	AluSx
CAediting_1212257	chr17_50086569_+	SINE	Alu	AluSx
CAediting_1212258	chr17_50086595_+	SINE	Alu	AluSx
CAediting_1212259	chr17_50086601_+	SINE	Alu	AluSx
CAediting_1212260	chr17_50086610_+	SINE	Alu	AluSx
CAediting_1212261	chr17_50086621_+	SINE	Alu	AluSx
CAediting_1212262	chr17_50086671_+	SINE	Alu	AluSx
CAediting_1212263	chr17_50086676_+	SINE	Alu	AluSx
CAediting_1212264	chr17_50086677_+	SINE	Alu	AluSx
CAediting_1212265	chr17_50086798_+	SINE	Alu	AluSp
CAediting_1212266	chr17_50086820_+	SINE	Alu	AluSp
CAediting_1212267	chr17_50086833_+	SINE	Alu	AluSp
CAediting_1212268	chr17_50086852_+	SINE	Alu	AluSp
CAediting_1212269	chr17_50086863_+	SINE	Alu	AluSp
CAediting_1212270	chr17_50086891_+	SINE	Alu	AluSp
CAediting_1212271	chr17_50086893_+	SINE	Alu	AluSp
CAediting_1212272	chr17_50086897_+	SINE	Alu	AluSp
CAediting_1212273	chr17_50086905_+	SINE	Alu	AluSp
CAediting_1212274	chr17_50086909_+	SINE	Alu	AluSp
CAediting_1212275	chr17_50086916_+	SINE	Alu	AluSp
CAediting_1212276	chr17_50086931_+	SINE	Alu	AluSp
CAediting_1212277	chr17_50086932_+	SINE	Alu	AluSp
CAediting_1212278	chr17_50086937_+	SINE	Alu	AluSp
CAediting_1212279	chr17_50086941_+	SINE	Alu	AluSp
CAediting_1212280	chr17_50086958_+	SINE	Alu	AluSp
CAediting_1212281	chr17_50086964_+	SINE	Alu	AluSp
CAediting_1212282	chr17_50087039_+	SINE	Alu	AluSp
CAediting_1212283	chr17_50087042_+	SINE	Alu	AluSp
CAediting_1212284	chr17_50087071_+	Simple_repeat	Simple_repeat	(AAAAT)n

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RNA A-to-I editing events in the alternative splicing sites for ITGA3

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000005884.16.ITGA3.

Correlation between RNA A-to-I editing and PSI for ENSG00000005884.16.ITGA3.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for ITGA3

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

ESCA.CAediting_1211932.ENSG00000005884.ITGA3.png
Soverview

ESCA.CAediting_1212025.ENSG00000005884.ITGA3.png
Soverview

ESCA.CAediting_1212027.ENSG00000005884.ITGA3.png
Soverview

ESCA.CAediting_1212029.ENSG00000005884.ITGA3.png
Soverview

ESCA.CAediting_1212047.ENSG00000005884.ITGA3.png
Soverview

ESCA.CAediting_1212106.ENSG00000005884.ITGA3.png
Soverview

KIRC.CAediting_1212025.ENSG00000005884.ITGA3.png
Soverview

KIRC.CAediting_1212027.ENSG00000005884.ITGA3.png
Soverview

KIRC.CAediting_1212029.ENSG00000005884.ITGA3.png
Soverview

KIRC.CAediting_1212054.ENSG00000005884.ITGA3.png
Soverview

KIRC.CAediting_1212064.ENSG00000005884.ITGA3.png
Soverview

THCA.CAediting_1212029.ENSG00000005884.ITGA3.png
Soverview

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Protein coding region RNA A-to-I editings for ITGA3

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for ITGA3

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_393	chr1_1167164_+	ENSG00000005884.16	ENST00000506401	hsa-miR-200b-3p	50072147	50072153	7mer-m8	50072133	50072154	151	-15.68
CAediting_980496	chr14_31014685_-	ENSG00000005884.16	ENST00000506401	hsa-miR-624-3p	50075581	50075587	7mer-m8	50075567	50075588	146	-13.61
CAediting_688080	chr9_63819626_+	ENSG00000005884.16	ENST00000506401	hsa-miR-4477b	50076437	50076443	7mer-m8	50076423	50076444	140	-11.67
CAediting_1399425	chr20_1392958_-	ENSG00000005884.16	ENST00000506401	hsa-miR-6869-5p	50074229	50074235	7mer-m8	50074215	50074236	147	-15.78
CAediting_77128	chr1_85133844_+	ENSG00000005884.16	ENST00000506401	hsa-miR-4423-3p	50074484	50074490	7mer-m8	50074471	50074491	155	-18.04
CAediting_1054808	chr15_66496985_-	ENSG00000005884.16	ENST00000007722	hsa-miR-4512	50089625	50089631	7mer-m8	50089611	50089632	144	-18.71
CAediting_77128	chr1_85133844_+	ENSG00000005884.16	ENST00000510809	hsa-miR-4423-3p	50074484	50074490	7mer-m8	50074471	50074491	155	-18.04
CAediting_1524209	chrX_134546392_-	ENSG00000005884.16	ENST00000506401	hsa-miR-503-5p	50075705	50075712	8mer-1a	50075690	50075712	140	-19.65
CAediting_468389	chr6_31355314_-	ENSG00000005884.16	ENST00000007722	hsa-miR-6891-5p	50089285	50089291	7mer-m8	50089275	50089292	159	-29.58

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for ITGA3

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST

ENST type

RNA structure without RNA A-to-I editing.

RNA structure with RNA A-to-I editing.

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID

ENST

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

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Relation with ADAR for ITGA3

Correlation between ADAR gene expression and RNA editing frequency

Cancer	CAeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
STAD	CAediting_1211929	chr17_50066108_+	0.00702523312464616	0.285433830516476	.	.	.	.
ESCA	CAediting_1211931	chr17_50066128_+	.	.	0.037921664513513	0.232538597264498	.	.
LUAD	CAediting_1212020	chr17_50082038_+	.	.	0.0425939816161835	0.26050443874666	.	.
THCA	CAediting_1212025	chr17_50082088_+	0.0259292183318288	0.292396229208968	.	.	.	.
ESCA	CAediting_1212025	chr17_50082088_+	.	.	0.00527790048280334	0.269119679453808	.	.
THCA	CAediting_1212027	chr17_50082091_+	0.0390197397406705	0.271805180534016	.	.	.	.
ESCA	CAediting_1212027	chr17_50082091_+	.	.	0.0249134282588638	0.219877752701962	.	.
THCA	CAediting_1212029	chr17_50082100_+	0.0460232113184584	0.229600765812873	.	.	.	.
ESCA	CAediting_1212029	chr17_50082100_+	.	.	0.00431762392325045	0.284495889580628	.	.
ESCA	CAediting_1212034	chr17_50082127_+	.	.	0.0117657121873947	0.278662551912191	.	.
ESCA	CAediting_1212046	chr17_50082308_+	.	.	0.00567852801405616	0.341973733220101	.	.
STAD	CAediting_1212047	chr17_50082318_+	.	.	0.00812980985101547	0.350289078902677	.	.
LUAD	CAediting_1212085	chr17_50083469_+	.	.	.	.	0.0127545910136755	0.343160528405047
BLCA	CAediting_1212122	chr17_50083995_+	0.0470053499683273	0.233281352739237	.	.	.	.
OV	CAediting_1212122	chr17_50083995_+	.	.	.	.	0.0232351891554094	0.191747243377898
STAD	CAediting_1212141	chr17_50084087_+	.	.	.	.	6.57617288380561e-05	0.461489237732952
ESCA	CAediting_1212144	chr17_50084114_+	.	.	0.025596281581582	0.246481700633516	0.0331718510686057	0.235514895714537
ESCA	CAediting_1212146	chr17_50084127_+	.	.	.	.	0.00242680704850618	0.390711462366677
LUAD	CAediting_1212168	chr17_50084691_+	.	.	.	.	0.0317585915226032	0.251622253859264
THCA	CAediting_1212168	chr17_50084691_+	0.0337098682882742	0.295061512731067	.	.	.	.

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Relation with cancer stages for ITGA3

Correlation between Cancer stages and RNA editing frequency

Cancer	Stage_type	CAeditomID	position	P-val	Coeff.
BLCA	pathologic_stage	CAediting_1212122	chr17_50083995_+	0.00118232634062552	0.374733076733645
ESCA	clinical_stage	CAediting_1211927	chr17_50066098_+	0.0377647416361677	-0.455960791056163
ESCA	clinical_stage	CAediting_1211931	chr17_50066128_+	0.0217771171472835	-0.48618519619439
ESCA	pathologic_stage	CAediting_1212029	chr17_50082100_+	0.033282360038529	0.219802890507083
ESCA	pathologic_stage	CAediting_1212064	chr17_50082495_+	0.0227005486567463	0.251414866472607
ESCA	pathologic_stage	CAediting_1212236	chr17_50086266_+	0.0327032575736284	0.255611238946136
KIRC	pathologic_stage	CAediting_1212029	chr17_50082100_+	0.0120740479623069	0.348990821234521
KIRC	pathologic_stage	CAediting_1212084	chr17_50083468_+	0.032855875176407	0.25913256546941
KIRC	pathologic_stage	CAediting_1212168	chr17_50084691_+	0.0123789200005748	0.318443497916376
STAD	pathologic_stage	CAediting_1211929	chr17_50066108_+	0.0141580617873343	-0.263696789130426
STAD	pathologic_stage	CAediting_1212119	chr17_50083982_+	0.00549491967145324	-0.317590462494771
THCA	pathologic_stage	CAediting_1212029	chr17_50082100_+	0.000697187120376378	0.380504269242593
THCA	pathologic_stage	CAediting_1212084	chr17_50083468_+	0.00269120594231859	0.307758501066913

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Relation with survival for ITGA3

Correlation between RNA editing and survival

Cancer	CAeditomID	position	KMpvalue	Coxpvalue	CoxHR
LUAD	CAediting_1212168	chr17_50084691_+	0.0408861313845336	0.0168122	707.487

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RelatedDrugs for ITGA3

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for ITGA3

Diseases associated with this gene.
(DisGeNet 7.0)

Gene	Disease ID	Disease name	# pubmeds	Source
ITGA3	C3553636	INTERSTITIAL LUNG DISEASE, NEPHROTIC SYNDROME, AND EPIDERMOLYSIS BULLOSA, CONGENITAL	3	CTD_human;GENOMICS_ENGLAND;ORPHANET;UNIPROT
ITGA3	C0079301	Junctional Epidermolysis Bullosa	2	GENOMICS_ENGLAND
ITGA3	C3554367	EPIDERMOLYSIS BULLOSA, NONSPECIFIC, AUTOSOMAL RECESSIVE	2	GENOMICS_ENGLAND

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene