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Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with cancer stages

Soverview

Relation with survival state

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene

Editing gene: IRS1 (CAeditome ID:3667)

Gene summary for IRS1

check button Gene summary
Gene informationGene symbol

IRS1

Gene ID

3667

Gene nameinsulin receptor substrate 1
SynonymsHIRS-1
Cytomap

2q36.3

Type of geneprotein-coding
Descriptioninsulin receptor substrate 1
Modification date20210531
UniProtAcc

P35568

Context

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID
IRS1

GO:0030159

Insulin receptor substrate 1

7493946

IRS1

GO:0008286

Insulin receptor substrate 1

16516141

IRS1

GO:0008286

Insulin receptor substrate 1

23401856

IRS1

GO:0014065

Insulin receptor substrate 1

7782332

IRS1

GO:0032868

Insulin receptor substrate 1

16516141

IRS1

GO:0046326

Insulin receptor substrate 1

7493946

IRS1

GO:0046628

Insulin receptor substrate 1

7493946

IRS1

GO:0046676

Insulin receptor substrate 1

15572028

IRS1

GO:0005654

Insulin receptor substrate 1

0000052

IRS1

GO:0005829

Insulin receptor substrate 1

0000052

IRS1

GO:0005886

Insulin receptor substrate 1

0000052

IRS1

GO:0005901

Insulin receptor substrate 1

15182363


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RNA A-to-I events for IRS1

check buttonRNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.
all structure

check button RNA editing frequencies across 33 cancers of gene: ENSG00000169047.5
boxplot

check button RNA A-to-I editing events in Cancer.
CAediting_246070(226746872, -), CAediting_246071(226746875, -), CAediting_246072(226751356, -), CAediting_246073(226751448, -), CAediting_246074(226751556, -), CAediting_246075(226754062, -), CAediting_246076(226757504, -), CAediting_246077(226760048, -), CAediting_246078(226760068, -), CAediting_246079(226760134, -), CAediting_246080(226764341, -), CAediting_246081(226764540, -), CAediting_246082(226766249, -), CAediting_246083(226766253, -), CAediting_246084(226766272, -), CAediting_246085(226766279, -), CAediting_246086(226766280, -), CAediting_246087(226766288, -), CAediting_246088(226766292, -), CAediting_246089(226766301, -), CAediting_246090(226766302, -), CAediting_246091(226766310, -), CAediting_246092(226766312, -), CAediting_246093(226766323, -), CAediting_246094(226766328, -), CAediting_246095(226766331, -), CAediting_246096(226766332, -), CAediting_246097(226766334, -), CAediting_246098(226766337, -), CAediting_246099(226766341, -), CAediting_246100(226766342, -), CAediting_246101(226766343, -), CAediting_246102(226766357, -), CAediting_246103(226766359, -), CAediting_246104(226766360, -), CAediting_246105(226766365, -), CAediting_246106(226766377, -), CAediting_246107(226766380, -), CAediting_246108(226766382, -), CAediting_246109(226766383, -), CAediting_246110(226766391, -), CAediting_246111(226766396, -), CAediting_246112(226766401, -), CAediting_246113(226766409, -), CAediting_246114(226766410, -), CAediting_246115(226766415, -), CAediting_246116(226766416, -), CAediting_246117(226766420, -), CAediting_246118(226766444, -), CAediting_246119(226782844, -), CAediting_246120(226782853, -), CAediting_246121(226784449, -), CAediting_246122(226784450, -), CAediting_246123(226784462, -), CAediting_246124(226784490, -), CAediting_246125(226784512, -), CAediting_246126(226784514, -), CAediting_246127(226784519, -), CAediting_246128(226784520, -), CAediting_246129(226784528, -), CAediting_246130(226784544, -), CAediting_246131(226784551, -), CAediting_246132(226784560, -), CAediting_246133(226784561, -), CAediting_246134(226784571, -), CAediting_246135(226784587, -), CAediting_246136(226784590, -), CAediting_246137(226784591, -), CAediting_246138(226784593, -), CAediting_246139(226784600, -), CAediting_246140(226784601, -), CAediting_246141(226784602, -), CAediting_246142(226784605, -), CAediting_246143(226784616, -), CAediting_246144(226784617, -), CAediting_246145(226784618, -), CAediting_246146(226784650, -), CAediting_246147(226784655, -), CAediting_246148(226784679, -), CAediting_246149(226784687, -), CAediting_246150(226784695, -), CAediting_246151(226784696, -), CAediting_246152(226784714, -), CAediting_246153(226785337, -), CAediting_246154(226785346, -), CAediting_246155(226785358, -), CAediting_246156(226785359, -), CAediting_246157(226785385, -), CAediting_246158(226785423, -), CAediting_246159(226785435, -), CAediting_246160(226785437, -), CAediting_246161(226785454, -), CAediting_246162(226785481, -), CAediting_246163(226785491, -), CAediting_246164(226785509, -), CAediting_246165(226785516, -), CAediting_246166(226785520, -), CAediting_246167(226785589, -), CAediting_246168(226785599, -), CAediting_246169(226785601, -),

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RNA editing positional annotations for IRS1 using Annovar

check button Protein coding RNA editing(s).
CAeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred

check button Gene structure information of RNA editing(s).
CAeditome IDPositionVariant type
CAediting_246070chr2_226746872_-intronic
CAediting_246071chr2_226746875_-intronic
CAediting_246072chr2_226751356_-intronic
CAediting_246073chr2_226751448_-intronic
CAediting_246074chr2_226751556_-intronic
CAediting_246075chr2_226754062_-intronic
CAediting_246076chr2_226757504_-intronic
CAediting_246077chr2_226760048_-intronic
CAediting_246078chr2_226760068_-intronic
CAediting_246079chr2_226760134_-intronic
CAediting_246080chr2_226764341_-intronic
CAediting_246081chr2_226764540_-intronic
CAediting_246082chr2_226766249_-intronic
CAediting_246083chr2_226766253_-intronic
CAediting_246084chr2_226766272_-intronic
CAediting_246085chr2_226766279_-intronic
CAediting_246086chr2_226766280_-intronic
CAediting_246087chr2_226766288_-intronic
CAediting_246088chr2_226766292_-intronic
CAediting_246089chr2_226766301_-intronic
CAediting_246090chr2_226766302_-intronic
CAediting_246091chr2_226766310_-intronic
CAediting_246092chr2_226766312_-intronic
CAediting_246093chr2_226766323_-intronic
CAediting_246094chr2_226766328_-intronic
CAediting_246095chr2_226766331_-intronic
CAediting_246096chr2_226766332_-intronic
CAediting_246097chr2_226766334_-intronic
CAediting_246098chr2_226766337_-intronic
CAediting_246099chr2_226766341_-intronic
CAediting_246100chr2_226766342_-intronic
CAediting_246101chr2_226766343_-intronic
CAediting_246102chr2_226766357_-intronic
CAediting_246103chr2_226766359_-intronic
CAediting_246104chr2_226766360_-intronic
CAediting_246105chr2_226766365_-intronic
CAediting_246106chr2_226766377_-intronic
CAediting_246107chr2_226766380_-intronic
CAediting_246108chr2_226766382_-intronic
CAediting_246109chr2_226766383_-intronic
CAediting_246110chr2_226766391_-intronic
CAediting_246111chr2_226766396_-intronic
CAediting_246112chr2_226766401_-intronic
CAediting_246113chr2_226766409_-intronic
CAediting_246114chr2_226766410_-intronic
CAediting_246115chr2_226766415_-intronic
CAediting_246116chr2_226766416_-intronic
CAediting_246117chr2_226766420_-intronic
CAediting_246118chr2_226766444_-intronic
CAediting_246119chr2_226782844_-intronic
CAediting_246120chr2_226782853_-intronic
CAediting_246121chr2_226784449_-intronic
CAediting_246122chr2_226784450_-intronic
CAediting_246123chr2_226784462_-intronic
CAediting_246124chr2_226784490_-intronic
CAediting_246125chr2_226784512_-intronic
CAediting_246126chr2_226784514_-intronic
CAediting_246127chr2_226784519_-intronic
CAediting_246128chr2_226784520_-intronic
CAediting_246129chr2_226784528_-intronic
CAediting_246130chr2_226784544_-intronic
CAediting_246131chr2_226784551_-intronic
CAediting_246132chr2_226784560_-intronic
CAediting_246133chr2_226784561_-intronic
CAediting_246134chr2_226784571_-intronic
CAediting_246135chr2_226784587_-intronic
CAediting_246136chr2_226784590_-intronic
CAediting_246137chr2_226784591_-intronic
CAediting_246138chr2_226784593_-intronic
CAediting_246139chr2_226784600_-intronic
CAediting_246140chr2_226784601_-intronic
CAediting_246141chr2_226784602_-intronic
CAediting_246142chr2_226784605_-intronic
CAediting_246143chr2_226784616_-intronic
CAediting_246144chr2_226784617_-intronic
CAediting_246145chr2_226784618_-intronic
CAediting_246146chr2_226784650_-intronic
CAediting_246147chr2_226784655_-intronic
CAediting_246148chr2_226784679_-intronic
CAediting_246149chr2_226784687_-intronic
CAediting_246150chr2_226784695_-intronic
CAediting_246151chr2_226784696_-intronic
CAediting_246152chr2_226784714_-intronic
CAediting_246153chr2_226785337_-intronic
CAediting_246154chr2_226785346_-intronic
CAediting_246155chr2_226785358_-intronic
CAediting_246156chr2_226785359_-intronic
CAediting_246157chr2_226785385_-intronic
CAediting_246158chr2_226785423_-intronic
CAediting_246159chr2_226785435_-intronic
CAediting_246160chr2_226785437_-intronic
CAediting_246161chr2_226785454_-intronic
CAediting_246162chr2_226785481_-intronic
CAediting_246163chr2_226785491_-intronic
CAediting_246164chr2_226785509_-intronic
CAediting_246165chr2_226785516_-intronic
CAediting_246166chr2_226785520_-intronic
CAediting_246167chr2_226785589_-intronic
CAediting_246168chr2_226785599_-intronic
CAediting_246169chr2_226785601_-intronic

check button Repat-regional RNA editing(s).
CAeditome IDPositionRepeat familyRepeat sub familyRepeat name
CAediting_246070chr2_226746872_-SINEAluAluSx
CAediting_246071chr2_226746875_-SINEAluAluSx
CAediting_246072chr2_226751356_-SINEAluAluY
CAediting_246073chr2_226751448_-SINEAluAluY
CAediting_246074chr2_226751556_-SINEAluAluY
CAediting_246075chr2_226754062_-SINEAluAluJb
CAediting_246076chr2_226757504_-SINEAluAluSx
CAediting_246077chr2_226760048_-SINEAluAluJb
CAediting_246078chr2_226760068_-SINEAluAluJb
CAediting_246079chr2_226760134_-SINEAluAluJb
CAediting_246080chr2_226764341_-SINEAluAluJr
CAediting_246081chr2_226764540_-SINEAluAluJr
CAediting_246082chr2_226766249_-SINEAluAluSz6
CAediting_246083chr2_226766253_-SINEAluAluSz6
CAediting_246084chr2_226766272_-SINEAluAluSz6
CAediting_246085chr2_226766279_-SINEAluAluSz6
CAediting_246086chr2_226766280_-SINEAluAluSz6
CAediting_246087chr2_226766288_-SINEAluAluSz6
CAediting_246088chr2_226766292_-SINEAluAluSz6
CAediting_246089chr2_226766301_-SINEAluAluSz6
CAediting_246090chr2_226766302_-SINEAluAluSz6
CAediting_246091chr2_226766310_-SINEAluAluSz6
CAediting_246092chr2_226766312_-SINEAluAluSz6
CAediting_246093chr2_226766323_-SINEAluAluSz6
CAediting_246094chr2_226766328_-SINEAluAluSz6
CAediting_246095chr2_226766331_-SINEAluAluSz6
CAediting_246096chr2_226766332_-SINEAluAluSz6
CAediting_246097chr2_226766334_-SINEAluAluSz6
CAediting_246098chr2_226766337_-SINEAluAluSz6
CAediting_246099chr2_226766341_-SINEAluAluSz6
CAediting_246100chr2_226766342_-SINEAluAluSz6
CAediting_246101chr2_226766343_-SINEAluAluSz6
CAediting_246102chr2_226766357_-SINEAluAluSz6
CAediting_246103chr2_226766359_-SINEAluAluSz6
CAediting_246104chr2_226766360_-SINEAluAluSz6
CAediting_246105chr2_226766365_-SINEAluAluSz6
CAediting_246106chr2_226766377_-SINEAluAluSz6
CAediting_246107chr2_226766380_-SINEAluAluSz6
CAediting_246108chr2_226766382_-SINEAluAluSz6
CAediting_246109chr2_226766383_-SINEAluAluSz6
CAediting_246110chr2_226766391_-SINEAluAluSz6
CAediting_246111chr2_226766396_-SINEAluAluSz6
CAediting_246112chr2_226766401_-SINEAluAluSz6
CAediting_246113chr2_226766409_-SINEAluAluSz6
CAediting_246114chr2_226766410_-SINEAluAluSz6
CAediting_246115chr2_226766415_-SINEAluAluSz6
CAediting_246116chr2_226766416_-SINEAluAluSz6
CAediting_246117chr2_226766420_-SINEAluAluSz6
CAediting_246118chr2_226766444_-SINEAluAluSz6
CAediting_246119chr2_226782844_-SINEAluAluSz
CAediting_246120chr2_226782853_-SINEAluAluSz
CAediting_246121chr2_226784449_-SINEAluAluSq2
CAediting_246122chr2_226784450_-SINEAluAluSq2
CAediting_246123chr2_226784462_-SINEAluAluSq2
CAediting_246124chr2_226784490_-SINEAluAluSq2
CAediting_246125chr2_226784512_-SINEAluAluSq2
CAediting_246126chr2_226784514_-SINEAluAluSq2
CAediting_246127chr2_226784519_-SINEAluAluSq2
CAediting_246128chr2_226784520_-SINEAluAluSq2
CAediting_246129chr2_226784528_-SINEAluAluSq2
CAediting_246130chr2_226784544_-SINEAluAluSq2
CAediting_246131chr2_226784551_-SINEAluAluSq2
CAediting_246132chr2_226784560_-SINEAluAluSq2
CAediting_246133chr2_226784561_-SINEAluAluSq2
CAediting_246134chr2_226784571_-SINEAluAluSq2
CAediting_246135chr2_226784587_-SINEAluAluSq2
CAediting_246136chr2_226784590_-SINEAluAluSq2
CAediting_246137chr2_226784591_-SINEAluAluSq2
CAediting_246138chr2_226784593_-SINEAluAluSq2
CAediting_246139chr2_226784600_-SINEAluAluSq2
CAediting_246140chr2_226784601_-SINEAluAluSq2
CAediting_246141chr2_226784602_-SINEAluAluSq2
CAediting_246142chr2_226784605_-SINEAluAluSq2
CAediting_246143chr2_226784616_-SINEAluAluSq2
CAediting_246144chr2_226784617_-SINEAluAluSq2
CAediting_246145chr2_226784618_-SINEAluAluSq2
CAediting_246146chr2_226784650_-SINEAluAluSq2
CAediting_246147chr2_226784655_-SINEAluAluSq2
CAediting_246148chr2_226784679_-SINEAluAluSq2
CAediting_246149chr2_226784687_-SINEAluAluSq2
CAediting_246150chr2_226784695_-SINEAluAluSq2
CAediting_246151chr2_226784696_-SINEAluAluSq2
CAediting_246152chr2_226784714_-SINEAluAluSq2
CAediting_246153chr2_226785337_-SINEAluAluSz
CAediting_246154chr2_226785346_-SINEAluAluSz
CAediting_246155chr2_226785358_-SINEAluAluSz
CAediting_246156chr2_226785359_-SINEAluAluSz
CAediting_246157chr2_226785385_-SINEAluAluSz
CAediting_246158chr2_226785423_-SINEAluAluSz
CAediting_246159chr2_226785435_-SINEAluAluSz
CAediting_246160chr2_226785437_-SINEAluAluSz
CAediting_246161chr2_226785454_-SINEAluAluSz
CAediting_246162chr2_226785481_-SINEAluAluSz
CAediting_246163chr2_226785491_-SINEAluAluSz
CAediting_246164chr2_226785509_-SINEAluAluSz
CAediting_246165chr2_226785516_-SINEAluAluSz
CAediting_246166chr2_226785520_-SINEAluAluSz
CAediting_246167chr2_226785589_-SINEAluAluSz
CAediting_246168chr2_226785599_-SINEAluAluSz
CAediting_246169chr2_226785601_-SINEAluAluSz

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RNA A-to-I editing events in the alternative splicing sites for IRS1

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeCAeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength

check button Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000169047.5.IRS1.

check button Correlation between RNA A-to-I editing and PSI for ENSG00000169047.5.IRS1.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for IRS1

check button Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.
boxplot

check button Correlation between RNA A-to-I editing and gene expression.
boxplot

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.
BRCA.CAediting_246128.ENSG00000169047.IRS1.png
Soverview

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Protein coding region RNA A-to-I editings for IRS1

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.


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The effects of the RNA editing to the miRNA binding sites for IRS1

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for IRS1

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.

check button RNA A-to-I editing in RNA structures for Minimum free energy (MFE).
CAeditom_IDENSTEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI

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Relation with ADAR for IRS1

check button Correlation between ADAR gene expression and RNA editing frequency
CancerCAeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)

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Relation with cancer stages for IRS1

check button Correlation between Cancer stages and RNA editing frequency
CancerStage_typeCAeditomIDpositionP-valCoeff.

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Relation with survival for IRS1

check button Correlation between RNA editing and survival
CancerCAeditomIDpositionKMpvalueCoxpvalueCoxHR

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RelatedDrugs for IRS1

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for IRS1

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease name# pubmedsSource
IRS1C0011860Diabetes Mellitus, Non-Insulin-Dependent9CTD_human;UNIPROT
IRS1C2239176Liver carcinoma2CTD_human
IRS1C0002152Alloxan Diabetes1CTD_human
IRS1C0007621Neoplastic Cell Transformation1CTD_human
IRS1C0010054Coronary Arteriosclerosis1CTD_human
IRS1C0010068Coronary heart disease1CTD_human
IRS1C0011849Diabetes Mellitus1CTD_human
IRS1C0011853Diabetes Mellitus, Experimental1CTD_human
IRS1C0020459Hyperinsulinism1CTD_human
IRS1C0020473Hyperlipidemia1CTD_human
IRS1C0021655Insulin Resistance1CTD_human
IRS1C0028754Obesity1CTD_human
IRS1C0032927Precancerous Conditions1CTD_human
IRS1C0033578Prostatic Neoplasms1CTD_human
IRS1C0038433Streptozotocin Diabetes1CTD_human
IRS1C0282313Condition, Preneoplastic1CTD_human
IRS1C0376358Malignant neoplasm of prostate1CTD_human
IRS1C0920563Insulin Sensitivity1CTD_human
IRS1C1168401Squamous cell carcinoma of the head and neck1CTD_human
IRS1C1257963Endogenous Hyperinsulinism1CTD_human
IRS1C1257964Exogenous Hyperinsulinism1CTD_human
IRS1C1257965Compensatory Hyperinsulinemia1CTD_human
IRS1C1706412Lipidemias1CTD_human
IRS1C1956346Coronary Artery Disease1CTD_human