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Editing gene: IGHG1 (CAeditome ID:3500)

Gene summary for IGHG1

Gene summary

Gene information	Gene symbol	IGHG1
	Gene ID	3500
	Gene name	immunoglobulin heavy constant gamma 1 (G1m marker)
	Synonyms	-
	Cytomap	14q32.33
	Type of gene	other
	Description	constant region of heavy chain of IgG1immunoglobulin gamma 1 (Gm marker)
	Modification date	20210518
	UniProtAcc	P01857
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene	GO ID	GO term	PubMed ID
IGHG1	GO:0005615	Immunoglobulin heavy constant gamma 1	25645918

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RNA A-to-I events for IGHG1

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000211896.5

RNA A-to-I editing events in Cancer.

CAediting_1022658(105668334, -), CAediting_1022659(105668347, -), CAediting_1022660(105677930, -), CAediting_1022661(105709799, -), CAediting_1022662(105709803, -), CAediting_1022663(105710027, -), CAediting_1022664(105710032, -), CAediting_1022665(105710077, -), CAediting_1022666(105710087, -), CAediting_1022667(105710092, -), CAediting_1022668(105710093, -), CAediting_1022669(105710102, -), CAediting_1022670(105710112, -), CAediting_1022671(105710126, -), CAediting_1022672(105710501, -), CAediting_1022673(105710515, -), CAediting_1022674(105796074, -), CAediting_1022675(105845390, -), CAediting_1022676(105858401, -), CAediting_1022677(105858880, -), CAediting_1022678(105859095, -), CAediting_1022679(105859100, -), CAediting_1022680(105859110, -), CAediting_1022681(105859117, -), CAediting_1022682(105859141, -), CAediting_1022683(105859296, -), CAediting_1022684(105859382, -), CAediting_1022685(105859536, -), CAediting_1022686(105859558, -), CAediting_1022687(105859566, -), CAediting_1022688(105859721, -), CAediting_1022689(105859726, -), CAediting_1022690(105859743, -), CAediting_1022691(105859787, -), CAediting_1022692(105859807, -), CAediting_1022693(105859813, -), CAediting_1022694(105859817, -), CAediting_1022695(105859818, -), CAediting_1022696(105860291, -), CAediting_1022697(105860309, -), CAediting_1022698(105860325, -), CAediting_1022699(105860340, -), CAediting_1022700(105860350, -), CAediting_1022701(105860355, -), CAediting_1022702(105860365, -), CAediting_1022703(105860385, -), CAediting_1022704(105860391, -), CAediting_1022705(105860392, -), CAediting_1022706(105860395, -), CAediting_1022707(105860396, -), CAediting_1022708(105860401, -), CAediting_1022709(105860419, -), CAediting_1022710(105861603, -), CAediting_1022711(105861846, -), CAediting_1022712(105861873, -), CAediting_1022713(105861910, -), CAediting_1022714(105861934, -), CAediting_1022715(105861968, -), CAediting_1022716(105861976, -), CAediting_1022717(105862388, -), CAediting_1022718(105862390, -), CAediting_1022719(105862479, -), CAediting_1022720(105862488, -), CAediting_1022721(105862497, -), CAediting_1022722(105862529, -), CAediting_1022723(105862573, -), CAediting_1022724(105862588, -), CAediting_1022725(105862595, -), CAediting_1022726(105862612, -), CAediting_1022727(105862734, -), CAediting_1022728(105862751, -), CAediting_1022729(105862772, -), CAediting_1022730(105862796, -), CAediting_1022731(105862847, -), CAediting_1022732(105862853, -), CAediting_1022733(105862873, -), CAediting_1022734(105863223, -), CAediting_1022735(105863712, -), CAediting_1022736(105863726, -), CAediting_1022737(105863779, -), CAediting_1022738(105864043, -), CAediting_1022739(105864045, -), CAediting_1022740(105864069, -), CAediting_1022741(105864634, -), CAediting_1022742(105904949, -), CAediting_1022743(105904971, -), CAediting_1022744(105905000, -), CAediting_1022745(105905093, -), CAediting_1022746(105939784, -), CAediting_1022747(105939799, -), CAediting_1022748(105939800, -), CAediting_1022749(105939805, -), CAediting_1022750(105939830, -), CAediting_1022751(105939832, -), CAediting_1022752(105939834, -), CAediting_1022753(105939839, -), CAediting_1022754(105939846, -), CAediting_1022755(105939849, -), CAediting_1022756(105939857, -), CAediting_1022757(105939874, -), CAediting_1022758(105939898, -), CAediting_1022759(105939902, -), CAediting_1022760(105939924, -), CAediting_1022761(105939926, -), CAediting_1022762(105939962, -), CAediting_1022763(105939998, -), CAediting_1022764(105940002, -), CAediting_1022765(105940012, -), CAediting_1022766(105940032, -), CAediting_1022767(105986121, -), CAediting_1022768(105986131, -), CAediting_1022769(105986578, -), CAediting_1022770(105986580, -), CAediting_1022771(105986582, -), CAediting_1022772(105986628, -), CAediting_1022773(105986660, -), CAediting_1022774(105986684, -), CAediting_1022775(105986693, -), CAediting_1022776(105986695, -), CAediting_1022777(105986706, -), CAediting_1022778(105987015, -), CAediting_1022779(105987077, -), CAediting_1022780(106005152, -), CAediting_1022781(106005159, -), CAediting_1022782(106005177, -), CAediting_1022783(106005180, -), CAediting_1022784(106005208, -), CAediting_1022785(106005217, -), CAediting_1022786(106005227, -), CAediting_1022787(106005240, -), CAediting_1022788(106005291, -), CAediting_1022789(106005323, -), CAediting_1022790(106005354, -), CAediting_1022791(106037905, -), CAediting_1022792(106037909, -), CAediting_1022793(106037927, -), CAediting_1022794(106037929, -), CAediting_1022795(106037954, -), CAediting_1022796(106037956, -), CAediting_1022797(106037985, -), CAediting_1022798(106037986, -), CAediting_1022799(106037989, -), CAediting_1022800(106037992, -), CAediting_1022801(106037995, -), CAediting_1022802(106038014, -), CAediting_1022803(106038027, -), CAediting_1022804(106038036, -), CAediting_1022805(106038042, -), CAediting_1022806(106038060, -), CAediting_1022807(106038070, -), CAediting_1022808(106038074, -), CAediting_1022809(106038088, -), CAediting_1022810(106038112, -), CAediting_1022811(106055589, -), CAediting_1022812(106055590, -), CAediting_1022813(106055593, -), CAediting_1022814(106055606, -), CAediting_1022815(106055611, -), CAediting_1022816(106055612, -), CAediting_1022817(106055613, -), CAediting_1022818(106055617, -), CAediting_1022819(106055620, -), CAediting_1022820(106055632, -), CAediting_1022821(106055646, -), CAediting_1022822(106062206, -), CAediting_1022823(106062216, -), CAediting_1022824(106062284, -), CAediting_1022825(106062287, -), CAediting_1022826(106062292, -), CAediting_1022827(106062357, -), CAediting_1022828(106062376, -), CAediting_1022829(106062390, -), CAediting_1022830(106062628, -), CAediting_1022831(106062631, -), CAediting_1022832(106116631, -), CAediting_1022833(106116633, -), CAediting_1022834(106116639, -), CAediting_1022835(106116670, -), CAediting_1022836(106116672, -), CAediting_1022837(106116713, -), CAediting_1022838(106116717, -), CAediting_1022839(106116780, -), CAediting_1022840(106116815, -), CAediting_1022841(106116828, -), CAediting_1022842(106129583, -), CAediting_1022843(106129585, -), CAediting_1022844(106129586, -), CAediting_1022845(106129607, -), CAediting_1022846(106129609, -), CAediting_1022847(106129610, -), CAediting_1022848(106129615, -), CAediting_1022849(106129617, -), CAediting_1022850(106129631, -), CAediting_1022851(106129635, -), CAediting_1022852(106129642, -), CAediting_1022853(106129707, -), CAediting_1022854(106129710, -), CAediting_1022855(106129716, -), CAediting_1022856(106129764, -), CAediting_1022857(106145960, -), CAediting_1022858(106145977, -), CAediting_1022859(106145990, -), CAediting_1022860(106146008, -), CAediting_1022861(106146009, -), CAediting_1022862(106146014, -), CAediting_1022863(106153629, -), CAediting_1022864(106153652, -), CAediting_1022865(106153657, -), CAediting_1022866(106153659, -), CAediting_1022867(106153665, -), CAediting_1022868(106153686, -), CAediting_1022869(106153688, -), CAediting_1022870(106153689, -), CAediting_1022871(106153691, -), CAediting_1022872(106153693, -), CAediting_1022873(106153702, -), CAediting_1022874(106153705, -), CAediting_1022875(106153725, -), CAediting_1022876(106153742, -), CAediting_1022877(106153744, -), CAediting_1022878(106153757, -), CAediting_1022879(106153764, -), CAediting_1022880(106153855, -), CAediting_1022881(106153869, -), CAediting_1022882(106153887, -), CAediting_1022883(106153888, -), CAediting_1022884(106154110, -), CAediting_1022885(106184897, -), CAediting_1022886(106184934, -), CAediting_1022887(106184961, -), CAediting_1022888(106185001, -), CAediting_1022889(106185008, -), CAediting_1022890(106185019, -), CAediting_1022891(106185023, -), CAediting_1022892(106185032, -), CAediting_1022893(106185034, -), CAediting_1022894(106185067, -), CAediting_1022895(106185079, -), CAediting_1022896(106185095, -), CAediting_1022897(106185113, -), CAediting_1022898(106196890, -), CAediting_1022899(106196896, -), CAediting_1022900(106196902, -), CAediting_1022901(106196903, -), CAediting_1022902(106196906, -), CAediting_1022903(106196912, -), CAediting_1022904(106196916, -), CAediting_1022905(106196925, -), CAediting_1022906(106210934, -), CAediting_1022907(106210936, -), CAediting_1022908(106210966, -), CAediting_1022909(106210971, -), CAediting_1022910(106210979, -), CAediting_1022911(106210981, -), CAediting_1022912(106210982, -), CAediting_1022913(106210986, -), CAediting_1022914(106211006, -), CAediting_1022915(106211011, -), CAediting_1022916(106211012, -), CAediting_1022917(106211016, -), CAediting_1022918(106211031, -), CAediting_1022919(106211137, -), CAediting_1022920(106235099, -), CAediting_1022921(106235105, -), CAediting_1022922(106235108, -), CAediting_1022923(106235112, -), CAediting_1022924(106235113, -), CAediting_1022925(106235124, -), CAediting_1022926(106235144, -), CAediting_1022927(106235157, -), CAediting_1022928(106235169, -), CAediting_1022929(106235186, -), CAediting_1022930(106235188, -), CAediting_1022931(106235201, -), CAediting_1022932(106235261, -), CAediting_1022933(106268602, -), CAediting_1022934(106268604, -), CAediting_1022935(106268606, -), CAediting_1022936(106268608, -), CAediting_1022937(106268610, -), CAediting_1022938(106268649, -), CAediting_1022939(106268670, -), CAediting_1022940(106268672, -), CAediting_1022941(106268676, -), CAediting_1022942(106268682, -), CAediting_1022943(106268686, -), CAediting_1022944(106268694, -), CAediting_1022945(106268799, -), CAediting_1022946(106268802, -), CAediting_1022947(106268811, -), CAediting_1022948(106268820, -), CAediting_1022949(106268824, -), CAediting_1022950(106276542, -), CAediting_1022951(106276551, -), CAediting_1022952(106276603, -), CAediting_1022953(106276608, -), CAediting_1022954(106276614, -), CAediting_1022955(106276637, -), CAediting_1022956(106276648, -), CAediting_1022957(106276700, -), CAediting_1022958(106276754, -), CAediting_1022959(106301393, -), CAediting_1022960(106301396, -), CAediting_1022961(106301402, -), CAediting_1022962(106301420, -), CAediting_1022963(106301437, -), CAediting_1022964(106301439, -), CAediting_1022965(106301446, -), CAediting_1022966(106301460, -), CAediting_1022967(106301465, -), CAediting_1022968(106301466, -), CAediting_1022969(106301473, -), CAediting_1022970(106301475, -), CAediting_1022971(106301478, -), CAediting_1022972(106301479, -), CAediting_1022973(106301488, -), CAediting_1022974(106301494, -), CAediting_1022975(106301497, -), CAediting_1022976(106301500, -), CAediting_1022977(106301519, -), CAediting_1022978(106301522, -), CAediting_1022979(106301523, -), CAediting_1022980(106301526, -), CAediting_1022981(106301530, -), CAediting_1022982(106301543, -), CAediting_1022983(106301563, -), CAediting_1022984(106301567, -), CAediting_1022985(106301581, -), CAediting_1022986(106301597, -), CAediting_1022987(106301653, -), CAediting_1022988(106317926, -), CAediting_1022989(106317936, -), CAediting_1022990(106324306, -), CAediting_1022991(106324320, -), CAediting_1022992(106324321, -), CAediting_1022993(106324332, -), CAediting_1022994(106324334, -), CAediting_1022995(106324354, -), CAediting_1022996(106324357, -), CAediting_1022997(106324381, -), CAediting_1022998(106335084, -), CAediting_1022999(106335117, -), CAediting_1023000(106335123, -), CAediting_1023001(106335146, -), CAediting_1023002(106335147, -), CAediting_1023003(106335156, -), CAediting_1023004(106335158, -), CAediting_1023005(106335160, -), CAediting_1023006(106335162, -), CAediting_1023007(106335207, -), CAediting_1023008(106348299, -), CAediting_1023009(106349285, -), CAediting_1023010(106349329, -), CAediting_1023011(106349334, -), CAediting_1023012(106349335, -), CAediting_1023013(106349346, -), CAediting_1023014(106349349, -), CAediting_1023015(106349350, -), CAediting_1023016(106349352, -), CAediting_1023017(106349353, -), CAediting_1023018(106349359, -), CAediting_1023019(106349363, -), CAediting_1023020(106349366, -), CAediting_1023021(106349374, -), CAediting_1023022(106349378, -), CAediting_1023023(106349385, -), CAediting_1023024(106349386, -), CAediting_1023025(106349397, -), CAediting_1023026(106349407, -), CAediting_1023027(106349410, -), CAediting_1023028(106349425, -), CAediting_1023029(106349467, -), CAediting_1023030(106349473, -), CAediting_1023031(106359795, -), CAediting_1023032(106359821, -), CAediting_1023033(106359826, -), CAediting_1023034(106359840, -), CAediting_1023035(106359842, -), CAediting_1023036(106359860, -), CAediting_1023037(106359861, -), CAediting_1023038(106359871, -), CAediting_1023039(106359882, -), CAediting_1023040(106359886, -), CAediting_1023041(106359893, -), CAediting_1023042(106359894, -), CAediting_1023043(106359914, -), CAediting_1023044(106359915, -), CAediting_1023045(106359959, -), CAediting_1023046(106359999, -), CAediting_1023047(106360009, -), CAediting_1023048(106373737, -), CAediting_1023049(106373752, -), CAediting_1023050(106373761, -), CAediting_1023051(106373776, -), CAediting_1023052(106373785, -), CAediting_1023053(106377715, -), CAediting_1023054(106377719, -), CAediting_1023055(106400227, -), CAediting_1023056(106410524, -), CAediting_1023057(106410539, -), CAediting_1023058(106410544, -), CAediting_1023059(106410545, -), CAediting_1023060(106410560, -), CAediting_1023061(106410561, -), CAediting_1023062(106410563, -), CAediting_1023063(106410570, -), CAediting_1023064(106421755, -), CAediting_1023065(106421785, -), CAediting_1023066(106421812, -), CAediting_1023067(106421826, -), CAediting_1023068(106421844, -), CAediting_1023069(106421879, -), CAediting_1023070(106421907, -), CAediting_1023071(106421961, -), CAediting_1023072(106421971, -), CAediting_1023073(106434552, -), CAediting_1023074(106434591, -), CAediting_1023075(106434596, -), CAediting_1023076(106434597, -), CAediting_1023077(106435513, -), CAediting_1023078(106436066, -), CAediting_1023079(106442856, -), CAediting_1023080(106470261, -), CAediting_1023081(106470263, -), CAediting_1023082(106470295, -), CAediting_1023083(106470300, -), CAediting_1023084(106470308, -), CAediting_1023085(106470315, -), CAediting_1023086(106470334, -), CAediting_1023087(106470335, -), CAediting_1023088(106470341, -), CAediting_1023089(106470356, -), CAediting_1023090(106470360, -), CAediting_1023091(106470376, -), CAediting_1023092(106470387, -), CAediting_1023093(106537806, -), CAediting_1023094(106537808, -), CAediting_1023095(106537812, -), CAediting_1023096(106537845, -), CAediting_1023097(106537847, -), CAediting_1023098(106537853, -), CAediting_1023099(106537855, -), CAediting_1023100(106537860, -), CAediting_1023101(106537876, -), CAediting_1023102(106537877, -), CAediting_1023103(106537885, -), CAediting_1023104(106537913, -), CAediting_1023105(106537934, -), CAediting_1023106(106537949, -), CAediting_1023107(106538216, -), CAediting_1023108(106538275, -), CAediting_1023109(106538277, -),

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RNA editing positional annotations for IGHG1 using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_1022658	chr14_105668334_-	ncRNA_exonic
CAediting_1022659	chr14_105668347_-	ncRNA_exonic
CAediting_1022660	chr14_105677930_-	intronic
CAediting_1022661	chr14_105709799_-	intronic
CAediting_1022662	chr14_105709803_-	intronic
CAediting_1022663	chr14_105710027_-	intronic
CAediting_1022664	chr14_105710032_-	intronic
CAediting_1022665	chr14_105710077_-	intronic
CAediting_1022666	chr14_105710087_-	intronic
CAediting_1022667	chr14_105710092_-	intronic
CAediting_1022668	chr14_105710093_-	intronic
CAediting_1022669	chr14_105710102_-	intronic
CAediting_1022670	chr14_105710112_-	intronic
CAediting_1022671	chr14_105710126_-	intronic
CAediting_1022672	chr14_105710501_-	intronic
CAediting_1022673	chr14_105710515_-	intronic
CAediting_1022674	chr14_105796074_-	intronic
CAediting_1022675	chr14_105845390_-	exonic
CAediting_1022676	chr14_105858401_-	ncRNA_exonic
CAediting_1022677	chr14_105858880_-	intronic
CAediting_1022678	chr14_105859095_-	intronic
CAediting_1022679	chr14_105859100_-	intronic
CAediting_1022680	chr14_105859110_-	intronic
CAediting_1022681	chr14_105859117_-	intronic
CAediting_1022682	chr14_105859141_-	intronic
CAediting_1022683	chr14_105859296_-	intronic
CAediting_1022684	chr14_105859382_-	intronic
CAediting_1022685	chr14_105859536_-	ncRNA_exonic
CAediting_1022686	chr14_105859558_-	intronic
CAediting_1022687	chr14_105859566_-	intronic
CAediting_1022688	chr14_105859721_-	intronic
CAediting_1022689	chr14_105859726_-	intronic
CAediting_1022690	chr14_105859743_-	ncRNA_exonic
CAediting_1022691	chr14_105859787_-	ncRNA_exonic
CAediting_1022692	chr14_105859807_-	intronic
CAediting_1022693	chr14_105859813_-	intronic
CAediting_1022694	chr14_105859817_-	intronic
CAediting_1022695	chr14_105859818_-	intronic
CAediting_1022696	chr14_105860291_-	intronic
CAediting_1022697	chr14_105860309_-	intronic
CAediting_1022698	chr14_105860325_-	intronic
CAediting_1022699	chr14_105860340_-	intronic
CAediting_1022700	chr14_105860350_-	intronic
CAediting_1022701	chr14_105860355_-	intronic
CAediting_1022702	chr14_105860365_-	intronic
CAediting_1022703	chr14_105860385_-	intronic
CAediting_1022704	chr14_105860391_-	intronic
CAediting_1022705	chr14_105860392_-	intronic
CAediting_1022706	chr14_105860395_-	intronic
CAediting_1022707	chr14_105860396_-	intronic
CAediting_1022708	chr14_105860401_-	intronic
CAediting_1022709	chr14_105860419_-	intronic
CAediting_1022710	chr14_105861603_-	intronic
CAediting_1022711	chr14_105861846_-	intronic
CAediting_1022712	chr14_105861873_-	intronic
CAediting_1022713	chr14_105861910_-	intronic
CAediting_1022714	chr14_105861934_-	intronic
CAediting_1022715	chr14_105861968_-	intronic
CAediting_1022716	chr14_105861976_-	intronic
CAediting_1022717	chr14_105862388_-	intronic
CAediting_1022718	chr14_105862390_-	intronic
CAediting_1022719	chr14_105862479_-	intronic
CAediting_1022720	chr14_105862488_-	intronic
CAediting_1022721	chr14_105862497_-	intronic
CAediting_1022722	chr14_105862529_-	intronic
CAediting_1022723	chr14_105862573_-	intronic
CAediting_1022724	chr14_105862588_-	intronic
CAediting_1022725	chr14_105862595_-	intronic
CAediting_1022726	chr14_105862612_-	intronic
CAediting_1022727	chr14_105862734_-	intronic
CAediting_1022728	chr14_105862751_-	intronic
CAediting_1022729	chr14_105862772_-	intronic
CAediting_1022730	chr14_105862796_-	intronic
CAediting_1022731	chr14_105862847_-	intronic
CAediting_1022732	chr14_105862853_-	intronic
CAediting_1022733	chr14_105862873_-	intronic
CAediting_1022734	chr14_105863223_-	exonic
CAediting_1022735	chr14_105863712_-	intronic
CAediting_1022736	chr14_105863726_-	intronic
CAediting_1022737	chr14_105863779_-	intronic
CAediting_1022738	chr14_105864043_-	intronic
CAediting_1022739	chr14_105864045_-	intronic
CAediting_1022740	chr14_105864069_-	intronic
CAediting_1022741	chr14_105864634_-	exonic
CAediting_1022742	chr14_105904949_-	intronic
CAediting_1022743	chr14_105904971_-	intronic
CAediting_1022744	chr14_105905000_-	intronic
CAediting_1022745	chr14_105905093_-	intronic
CAediting_1022746	chr14_105939784_-	exonic
CAediting_1022747	chr14_105939799_-	exonic
CAediting_1022748	chr14_105939800_-	exonic
CAediting_1022749	chr14_105939805_-	exonic
CAediting_1022750	chr14_105939830_-	exonic
CAediting_1022751	chr14_105939832_-	exonic
CAediting_1022752	chr14_105939834_-	exonic
CAediting_1022753	chr14_105939839_-	exonic
CAediting_1022754	chr14_105939846_-	exonic
CAediting_1022755	chr14_105939849_-	exonic
CAediting_1022756	chr14_105939857_-	exonic
CAediting_1022757	chr14_105939874_-	exonic
CAediting_1022758	chr14_105939898_-	exonic
CAediting_1022759	chr14_105939902_-	exonic
CAediting_1022760	chr14_105939924_-	exonic
CAediting_1022761	chr14_105939926_-	exonic
CAediting_1022762	chr14_105939962_-	exonic
CAediting_1022763	chr14_105939998_-	exonic
CAediting_1022764	chr14_105940002_-	exonic
CAediting_1022765	chr14_105940012_-	exonic
CAediting_1022766	chr14_105940032_-	exonic
CAediting_1022767	chr14_105986121_-	intronic
CAediting_1022768	chr14_105986131_-	intronic
CAediting_1022769	chr14_105986578_-	intronic
CAediting_1022770	chr14_105986580_-	intronic
CAediting_1022771	chr14_105986582_-	exonic;splicing
CAediting_1022772	chr14_105986628_-	exonic
CAediting_1022773	chr14_105986660_-	exonic
CAediting_1022774	chr14_105986684_-	exonic
CAediting_1022775	chr14_105986693_-	exonic
CAediting_1022776	chr14_105986695_-	exonic
CAediting_1022777	chr14_105986706_-	exonic
CAediting_1022778	chr14_105987015_-	exonic
CAediting_1022779	chr14_105987077_-	UTR5
CAediting_1022780	chr14_106005152_-	exonic
CAediting_1022781	chr14_106005159_-	exonic
CAediting_1022782	chr14_106005177_-	exonic
CAediting_1022783	chr14_106005180_-	exonic
CAediting_1022784	chr14_106005208_-	exonic
CAediting_1022785	chr14_106005217_-	exonic
CAediting_1022786	chr14_106005227_-	exonic
CAediting_1022787	chr14_106005240_-	exonic
CAediting_1022788	chr14_106005291_-	exonic
CAediting_1022789	chr14_106005323_-	exonic
CAediting_1022790	chr14_106005354_-	exonic
CAediting_1022791	chr14_106037905_-	exonic
CAediting_1022792	chr14_106037909_-	exonic
CAediting_1022793	chr14_106037927_-	exonic
CAediting_1022794	chr14_106037929_-	exonic
CAediting_1022795	chr14_106037954_-	exonic
CAediting_1022796	chr14_106037956_-	exonic
CAediting_1022797	chr14_106037985_-	exonic
CAediting_1022798	chr14_106037986_-	exonic
CAediting_1022799	chr14_106037989_-	exonic
CAediting_1022800	chr14_106037992_-	exonic
CAediting_1022801	chr14_106037995_-	exonic
CAediting_1022802	chr14_106038014_-	exonic
CAediting_1022803	chr14_106038027_-	exonic
CAediting_1022804	chr14_106038036_-	exonic
CAediting_1022805	chr14_106038042_-	exonic
CAediting_1022806	chr14_106038060_-	exonic
CAediting_1022807	chr14_106038070_-	exonic
CAediting_1022808	chr14_106038074_-	exonic
CAediting_1022809	chr14_106038088_-	exonic
CAediting_1022810	chr14_106038112_-	exonic
CAediting_1022811	chr14_106055589_-	exonic
CAediting_1022812	chr14_106055590_-	exonic
CAediting_1022813	chr14_106055593_-	exonic
CAediting_1022814	chr14_106055606_-	exonic
CAediting_1022815	chr14_106055611_-	exonic
CAediting_1022816	chr14_106055612_-	exonic
CAediting_1022817	chr14_106055613_-	exonic
CAediting_1022818	chr14_106055617_-	exonic
CAediting_1022819	chr14_106055620_-	exonic
CAediting_1022820	chr14_106055632_-	exonic
CAediting_1022821	chr14_106055646_-	exonic
CAediting_1022822	chr14_106062206_-	exonic
CAediting_1022823	chr14_106062216_-	exonic
CAediting_1022824	chr14_106062284_-	exonic
CAediting_1022825	chr14_106062287_-	exonic
CAediting_1022826	chr14_106062292_-	exonic
CAediting_1022827	chr14_106062357_-	exonic
CAediting_1022828	chr14_106062376_-	exonic
CAediting_1022829	chr14_106062390_-	exonic
CAediting_1022830	chr14_106062628_-	UTR5
CAediting_1022831	chr14_106062631_-	UTR5
CAediting_1022832	chr14_106116631_-	exonic
CAediting_1022833	chr14_106116633_-	exonic
CAediting_1022834	chr14_106116639_-	exonic
CAediting_1022835	chr14_106116670_-	exonic
CAediting_1022836	chr14_106116672_-	exonic
CAediting_1022837	chr14_106116713_-	exonic
CAediting_1022838	chr14_106116717_-	exonic
CAediting_1022839	chr14_106116780_-	exonic
CAediting_1022840	chr14_106116815_-	exonic
CAediting_1022841	chr14_106116828_-	exonic
CAediting_1022842	chr14_106129583_-	exonic
CAediting_1022843	chr14_106129585_-	exonic
CAediting_1022844	chr14_106129586_-	exonic
CAediting_1022845	chr14_106129607_-	exonic
CAediting_1022846	chr14_106129609_-	exonic
CAediting_1022847	chr14_106129610_-	exonic
CAediting_1022848	chr14_106129615_-	exonic
CAediting_1022849	chr14_106129617_-	exonic
CAediting_1022850	chr14_106129631_-	exonic
CAediting_1022851	chr14_106129635_-	exonic
CAediting_1022852	chr14_106129642_-	exonic
CAediting_1022853	chr14_106129707_-	exonic
CAediting_1022854	chr14_106129710_-	exonic
CAediting_1022855	chr14_106129716_-	exonic
CAediting_1022856	chr14_106129764_-	exonic
CAediting_1022857	chr14_106145960_-	ncRNA_exonic
CAediting_1022858	chr14_106145977_-	ncRNA_exonic
CAediting_1022859	chr14_106145990_-	ncRNA_exonic
CAediting_1022860	chr14_106146008_-	ncRNA_exonic
CAediting_1022861	chr14_106146009_-	ncRNA_exonic
CAediting_1022862	chr14_106146014_-	ncRNA_exonic
CAediting_1022863	chr14_106153629_-	exonic
CAediting_1022864	chr14_106153652_-	exonic
CAediting_1022865	chr14_106153657_-	exonic
CAediting_1022866	chr14_106153659_-	exonic
CAediting_1022867	chr14_106153665_-	exonic
CAediting_1022868	chr14_106153686_-	exonic
CAediting_1022869	chr14_106153688_-	exonic
CAediting_1022870	chr14_106153689_-	exonic
CAediting_1022871	chr14_106153691_-	exonic
CAediting_1022872	chr14_106153693_-	exonic
CAediting_1022873	chr14_106153702_-	exonic
CAediting_1022874	chr14_106153705_-	exonic
CAediting_1022875	chr14_106153725_-	exonic
CAediting_1022876	chr14_106153742_-	exonic
CAediting_1022877	chr14_106153744_-	exonic
CAediting_1022878	chr14_106153757_-	exonic
CAediting_1022879	chr14_106153764_-	exonic
CAediting_1022880	chr14_106153855_-	exonic
CAediting_1022881	chr14_106153869_-	exonic
CAediting_1022882	chr14_106153887_-	exonic
CAediting_1022883	chr14_106153888_-	exonic
CAediting_1022884	chr14_106154110_-	UTR5
CAediting_1022885	chr14_106184897_-	intronic
CAediting_1022886	chr14_106184934_-	exonic
CAediting_1022887	chr14_106184961_-	exonic
CAediting_1022888	chr14_106185001_-	exonic
CAediting_1022889	chr14_106185008_-	exonic
CAediting_1022890	chr14_106185019_-	exonic
CAediting_1022891	chr14_106185023_-	exonic
CAediting_1022892	chr14_106185032_-	exonic
CAediting_1022893	chr14_106185034_-	exonic
CAediting_1022894	chr14_106185067_-	exonic
CAediting_1022895	chr14_106185079_-	exonic
CAediting_1022896	chr14_106185095_-	exonic
CAediting_1022897	chr14_106185113_-	exonic
CAediting_1022898	chr14_106196890_-	ncRNA_exonic
CAediting_1022899	chr14_106196896_-	ncRNA_exonic
CAediting_1022900	chr14_106196902_-	ncRNA_exonic
CAediting_1022901	chr14_106196903_-	ncRNA_exonic
CAediting_1022902	chr14_106196906_-	ncRNA_exonic
CAediting_1022903	chr14_106196912_-	ncRNA_exonic
CAediting_1022904	chr14_106196916_-	ncRNA_exonic
CAediting_1022905	chr14_106196925_-	ncRNA_exonic
CAediting_1022906	chr14_106210934_-	intronic
CAediting_1022907	chr14_106210936_-	exonic
CAediting_1022908	chr14_106210966_-	exonic
CAediting_1022909	chr14_106210971_-	exonic
CAediting_1022910	chr14_106210979_-	exonic
CAediting_1022911	chr14_106210981_-	exonic
CAediting_1022912	chr14_106210982_-	exonic
CAediting_1022913	chr14_106210986_-	exonic
CAediting_1022914	chr14_106211006_-	exonic
CAediting_1022915	chr14_106211011_-	exonic
CAediting_1022916	chr14_106211012_-	exonic
CAediting_1022917	chr14_106211016_-	exonic
CAediting_1022918	chr14_106211031_-	exonic
CAediting_1022919	chr14_106211137_-	exonic
CAediting_1022920	chr14_106235099_-	exonic
CAediting_1022921	chr14_106235105_-	exonic
CAediting_1022922	chr14_106235108_-	exonic
CAediting_1022923	chr14_106235112_-	exonic
CAediting_1022924	chr14_106235113_-	exonic
CAediting_1022925	chr14_106235124_-	exonic
CAediting_1022926	chr14_106235144_-	exonic
CAediting_1022927	chr14_106235157_-	exonic
CAediting_1022928	chr14_106235169_-	exonic
CAediting_1022929	chr14_106235186_-	exonic
CAediting_1022930	chr14_106235188_-	exonic
CAediting_1022931	chr14_106235201_-	exonic
CAediting_1022932	chr14_106235261_-	exonic
CAediting_1022933	chr14_106268602_-	intronic
CAediting_1022934	chr14_106268604_-	intronic
CAediting_1022935	chr14_106268606_-	exonic
CAediting_1022936	chr14_106268608_-	exonic
CAediting_1022937	chr14_106268610_-	exonic
CAediting_1022938	chr14_106268649_-	exonic
CAediting_1022939	chr14_106268670_-	exonic
CAediting_1022940	chr14_106268672_-	exonic
CAediting_1022941	chr14_106268676_-	exonic
CAediting_1022942	chr14_106268682_-	exonic
CAediting_1022943	chr14_106268686_-	exonic
CAediting_1022944	chr14_106268694_-	exonic
CAediting_1022945	chr14_106268799_-	exonic
CAediting_1022946	chr14_106268802_-	exonic
CAediting_1022947	chr14_106268811_-	exonic
CAediting_1022948	chr14_106268820_-	exonic
CAediting_1022949	chr14_106268824_-	exonic
CAediting_1022950	chr14_106276542_-	intronic
CAediting_1022951	chr14_106276551_-	exonic
CAediting_1022952	chr14_106276603_-	exonic
CAediting_1022953	chr14_106276608_-	exonic
CAediting_1022954	chr14_106276614_-	exonic
CAediting_1022955	chr14_106276637_-	exonic
CAediting_1022956	chr14_106276648_-	exonic
CAediting_1022957	chr14_106276700_-	exonic
CAediting_1022958	chr14_106276754_-	exonic
CAediting_1022959	chr14_106301393_-	intronic
CAediting_1022960	chr14_106301396_-	exonic
CAediting_1022961	chr14_106301402_-	exonic
CAediting_1022962	chr14_106301420_-	exonic
CAediting_1022963	chr14_106301437_-	exonic
CAediting_1022964	chr14_106301439_-	exonic
CAediting_1022965	chr14_106301446_-	exonic
CAediting_1022966	chr14_106301460_-	exonic
CAediting_1022967	chr14_106301465_-	exonic
CAediting_1022968	chr14_106301466_-	exonic
CAediting_1022969	chr14_106301473_-	exonic
CAediting_1022970	chr14_106301475_-	exonic
CAediting_1022971	chr14_106301478_-	exonic
CAediting_1022972	chr14_106301479_-	exonic
CAediting_1022973	chr14_106301488_-	exonic
CAediting_1022974	chr14_106301494_-	exonic
CAediting_1022975	chr14_106301497_-	exonic
CAediting_1022976	chr14_106301500_-	exonic
CAediting_1022977	chr14_106301519_-	exonic
CAediting_1022978	chr14_106301522_-	exonic
CAediting_1022979	chr14_106301523_-	exonic
CAediting_1022980	chr14_106301526_-	exonic
CAediting_1022981	chr14_106301530_-	exonic
CAediting_1022982	chr14_106301543_-	exonic
CAediting_1022983	chr14_106301563_-	exonic
CAediting_1022984	chr14_106301567_-	exonic
CAediting_1022985	chr14_106301581_-	exonic
CAediting_1022986	chr14_106301597_-	exonic
CAediting_1022987	chr14_106301653_-	exonic
CAediting_1022988	chr14_106317926_-	ncRNA_exonic
CAediting_1022989	chr14_106317936_-	ncRNA_exonic
CAediting_1022990	chr14_106324306_-	exonic
CAediting_1022991	chr14_106324320_-	exonic
CAediting_1022992	chr14_106324321_-	exonic
CAediting_1022993	chr14_106324332_-	exonic
CAediting_1022994	chr14_106324334_-	exonic
CAediting_1022995	chr14_106324354_-	exonic
CAediting_1022996	chr14_106324357_-	exonic
CAediting_1022997	chr14_106324381_-	exonic
CAediting_1022998	chr14_106335084_-	exonic
CAediting_1022999	chr14_106335117_-	exonic
CAediting_1023000	chr14_106335123_-	exonic
CAediting_1023001	chr14_106335146_-	exonic
CAediting_1023002	chr14_106335147_-	exonic
CAediting_1023003	chr14_106335156_-	exonic
CAediting_1023004	chr14_106335158_-	exonic
CAediting_1023005	chr14_106335160_-	exonic
CAediting_1023006	chr14_106335162_-	exonic
CAediting_1023007	chr14_106335207_-	exonic
CAediting_1023008	chr14_106348299_-	intronic
CAediting_1023009	chr14_106349285_-	exonic
CAediting_1023010	chr14_106349329_-	exonic
CAediting_1023011	chr14_106349334_-	exonic
CAediting_1023012	chr14_106349335_-	exonic
CAediting_1023013	chr14_106349346_-	exonic
CAediting_1023014	chr14_106349349_-	exonic
CAediting_1023015	chr14_106349350_-	exonic
CAediting_1023016	chr14_106349352_-	exonic
CAediting_1023017	chr14_106349353_-	exonic
CAediting_1023018	chr14_106349359_-	exonic
CAediting_1023019	chr14_106349363_-	exonic
CAediting_1023020	chr14_106349366_-	exonic
CAediting_1023021	chr14_106349374_-	exonic
CAediting_1023022	chr14_106349378_-	exonic
CAediting_1023023	chr14_106349385_-	exonic
CAediting_1023024	chr14_106349386_-	exonic
CAediting_1023025	chr14_106349397_-	exonic
CAediting_1023026	chr14_106349407_-	exonic
CAediting_1023027	chr14_106349410_-	exonic
CAediting_1023028	chr14_106349425_-	exonic
CAediting_1023029	chr14_106349467_-	exonic
CAediting_1023030	chr14_106349473_-	exonic
CAediting_1023031	chr14_106359795_-	exonic
CAediting_1023032	chr14_106359821_-	exonic
CAediting_1023033	chr14_106359826_-	exonic
CAediting_1023034	chr14_106359840_-	exonic
CAediting_1023035	chr14_106359842_-	exonic
CAediting_1023036	chr14_106359860_-	exonic
CAediting_1023037	chr14_106359861_-	exonic
CAediting_1023038	chr14_106359871_-	exonic
CAediting_1023039	chr14_106359882_-	exonic
CAediting_1023040	chr14_106359886_-	exonic
CAediting_1023041	chr14_106359893_-	exonic
CAediting_1023042	chr14_106359894_-	exonic
CAediting_1023043	chr14_106359914_-	exonic
CAediting_1023044	chr14_106359915_-	exonic
CAediting_1023045	chr14_106359959_-	exonic
CAediting_1023046	chr14_106359999_-	exonic
CAediting_1023047	chr14_106360009_-	exonic
CAediting_1023048	chr14_106373737_-	exonic
CAediting_1023049	chr14_106373752_-	exonic
CAediting_1023050	chr14_106373761_-	exonic
CAediting_1023051	chr14_106373776_-	exonic
CAediting_1023052	chr14_106373785_-	exonic
CAediting_1023053	chr14_106377715_-	ncRNA_exonic
CAediting_1023054	chr14_106377719_-	ncRNA_exonic
CAediting_1023055	chr14_106400227_-	intronic
CAediting_1023056	chr14_106410524_-	exonic
CAediting_1023057	chr14_106410539_-	exonic
CAediting_1023058	chr14_106410544_-	exonic
CAediting_1023059	chr14_106410545_-	exonic
CAediting_1023060	chr14_106410560_-	exonic
CAediting_1023061	chr14_106410561_-	exonic
CAediting_1023062	chr14_106410563_-	exonic
CAediting_1023063	chr14_106410570_-	exonic
CAediting_1023064	chr14_106421755_-	exonic
CAediting_1023065	chr14_106421785_-	exonic
CAediting_1023066	chr14_106421812_-	exonic
CAediting_1023067	chr14_106421826_-	exonic
CAediting_1023068	chr14_106421844_-	exonic
CAediting_1023069	chr14_106421879_-	exonic
CAediting_1023070	chr14_106421907_-	exonic
CAediting_1023071	chr14_106421961_-	exonic
CAediting_1023072	chr14_106421971_-	exonic
CAediting_1023073	chr14_106434552_-	intronic
CAediting_1023074	chr14_106434591_-	intronic
CAediting_1023075	chr14_106434596_-	intronic
CAediting_1023076	chr14_106434597_-	intronic
CAediting_1023077	chr14_106435513_-	intronic
CAediting_1023078	chr14_106436066_-	intronic
CAediting_1023079	chr14_106442856_-	intronic
CAediting_1023080	chr14_106470261_-	intronic
CAediting_1023081	chr14_106470263_-	intronic
CAediting_1023082	chr14_106470295_-	exonic
CAediting_1023083	chr14_106470300_-	exonic
CAediting_1023084	chr14_106470308_-	exonic
CAediting_1023085	chr14_106470315_-	exonic
CAediting_1023086	chr14_106470334_-	exonic
CAediting_1023087	chr14_106470335_-	exonic
CAediting_1023088	chr14_106470341_-	exonic
CAediting_1023089	chr14_106470356_-	exonic
CAediting_1023090	chr14_106470360_-	exonic
CAediting_1023091	chr14_106470376_-	exonic
CAediting_1023092	chr14_106470387_-	exonic
CAediting_1023093	chr14_106537806_-	intronic
CAediting_1023094	chr14_106537808_-	intronic
CAediting_1023095	chr14_106537812_-	exonic
CAediting_1023096	chr14_106537845_-	exonic
CAediting_1023097	chr14_106537847_-	exonic
CAediting_1023098	chr14_106537853_-	exonic
CAediting_1023099	chr14_106537855_-	exonic
CAediting_1023100	chr14_106537860_-	exonic
CAediting_1023101	chr14_106537876_-	exonic
CAediting_1023102	chr14_106537877_-	exonic
CAediting_1023103	chr14_106537885_-	exonic
CAediting_1023104	chr14_106537913_-	exonic
CAediting_1023105	chr14_106537934_-	exonic
CAediting_1023106	chr14_106537949_-	exonic
CAediting_1023107	chr14_106538216_-	intronic
CAediting_1023108	chr14_106538275_-	UTR5
CAediting_1023109	chr14_106538277_-	UTR5

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_1022660	chr14_105677930_-	SINE	Alu	AluSx1
CAediting_1022674	chr14_105796074_-	SINE	Alu	AluSx
CAediting_1022676	chr14_105858401_-	Simple_repeat	Simple_repeat	(CCAGC)n
CAediting_1022677	chr14_105858880_-	Simple_repeat	Simple_repeat	(CCAGC)n
CAediting_1022678	chr14_105859095_-	Simple_repeat	Simple_repeat	(CCAGC)n
CAediting_1022679	chr14_105859100_-	Simple_repeat	Simple_repeat	(CCAGC)n
CAediting_1022680	chr14_105859110_-	Simple_repeat	Simple_repeat	(CCAGC)n
CAediting_1022681	chr14_105859117_-	Simple_repeat	Simple_repeat	(CCAGC)n
CAediting_1022682	chr14_105859141_-	Simple_repeat	Simple_repeat	(CCAGC)n
CAediting_1022683	chr14_105859296_-	Simple_repeat	Simple_repeat	(CCAGC)n
CAediting_1022684	chr14_105859382_-	Simple_repeat	Simple_repeat	(CCAGC)n
CAediting_1022685	chr14_105859536_-	Simple_repeat	Simple_repeat	(CCAGC)n
CAediting_1022686	chr14_105859558_-	Simple_repeat	Simple_repeat	(CCAGC)n
CAediting_1022687	chr14_105859566_-	Simple_repeat	Simple_repeat	(CCAGC)n
CAediting_1022688	chr14_105859721_-	Simple_repeat	Simple_repeat	(CCAGC)n
CAediting_1022689	chr14_105859726_-	Simple_repeat	Simple_repeat	(CCAGC)n
CAediting_1022690	chr14_105859743_-	Simple_repeat	Simple_repeat	(CCAGC)n
CAediting_1022691	chr14_105859787_-	Simple_repeat	Simple_repeat	(CCAGC)n
CAediting_1022692	chr14_105859807_-	Simple_repeat	Simple_repeat	(CCAGC)n
CAediting_1022693	chr14_105859813_-	Simple_repeat	Simple_repeat	(CCAGC)n
CAediting_1022694	chr14_105859817_-	Simple_repeat	Simple_repeat	(CCAGC)n
CAediting_1022695	chr14_105859818_-	Simple_repeat	Simple_repeat	(CCAGC)n
CAediting_1022696	chr14_105860291_-	Simple_repeat	Simple_repeat	(CCAGC)n
CAediting_1022697	chr14_105860309_-	Simple_repeat	Simple_repeat	(CCAGC)n
CAediting_1022698	chr14_105860325_-	Simple_repeat	Simple_repeat	(CCAGC)n
CAediting_1022699	chr14_105860340_-	Simple_repeat	Simple_repeat	(CCAGC)n
CAediting_1022700	chr14_105860350_-	Simple_repeat	Simple_repeat	(CCAGC)n
CAediting_1022701	chr14_105860355_-	Simple_repeat	Simple_repeat	(CCAGC)n
CAediting_1022702	chr14_105860365_-	Simple_repeat	Simple_repeat	(CCAGC)n
CAediting_1022703	chr14_105860385_-	Simple_repeat	Simple_repeat	(CCAGC)n
CAediting_1022767	chr14_105986121_-	SINE	Alu	AluSx1
CAediting_1022768	chr14_105986131_-	SINE	Alu	AluSx1
CAediting_1023008	chr14_106348299_-	SINE	Alu	AluYi6
CAediting_1023055	chr14_106400227_-	LINE	L1	L1PA2
CAediting_1023078	chr14_106436066_-	SINE	Alu	AluSc8
CAediting_1023079	chr14_106442856_-	SINE	Alu	AluSq10

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RNA A-to-I editing events in the alternative splicing sites for IGHG1

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000211896.5.IGHG1.

Correlation between RNA A-to-I editing and PSI for ENSG00000211896.5.IGHG1.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for IGHG1

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

LUAD.CAediting_1022935.ENSG00000211896.IGHG1.png
Soverview

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Protein coding region RNA A-to-I editings for IGHG1

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for IGHG1

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_748296	chr10_51299626_+	ENSG00000211896.5	ENST00000390548	hsa-miR-605-3p	105737622	105737628	7mer-m8	105737621	105737643	154	-25.52
CAediting_748296	chr10_51299626_+	ENSG00000211896.5	ENST00000390548	hsa-miR-605-3p	105737492	105737498	7mer-m8	105737491	105737512	140	-14.79
CAediting_980496	chr14_31014685_-	ENSG00000211896.5	ENST00000390548	hsa-miR-624-3p	105737581	105737587	7mer-m8	105737580	105737599	149	-20.78
CAediting_1054808	chr15_66496985_-	ENSG00000211896.5	ENST00000390548	hsa-miR-4512	105736594	105736600	7mer-m8	105736593	105736614	155	-21.94
CAediting_1054808	chr15_66496985_-	ENSG00000211896.5	ENST00000390548	hsa-miR-4512	105737439	105737445	7mer-m8	105737438	105737458	144	-20.57
CAediting_1229413	chr17_67471544_+	ENSG00000211896.5	ENST00000390548	hsa-miR-548aa	105737370	105737376	7mer-m8	105737369	105737393	148	-17.32
CAediting_86358	chr1_109598906_+	ENSG00000211896.5	ENST00000390548	hsa-miR-197-5p	105737126	105737131	6mer	105737125	105737147	145	-29.6
CAediting_86358	chr1_109598906_+	ENSG00000211896.5	ENST00000390548	hsa-miR-197-5p	105737004	105737010	7mer-1a	105736990	105737010	141	-28.91
CAediting_604450	chr7_133034877_-	ENSG00000211896.5	ENST00000390548	hsa-miR-3654	105736723	105736729	7mer-m8	105736722	105736740	140	-20.43

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_86358	chr1_109598906_+	ENSG00000211896.5	ENST00000390548	hsa-miR-197-5p	105737564	105737570	7mer-m8	105737563	105737585	140	-18.3
CAediting_1054808	chr15_66496985_-	ENSG00000211896.5	ENST00000390548	hsa-miR-4512	105737310	105737316	7mer-m8	105737309	105737330	146	-19.23
CAediting_1524209	chrX_134546392_-	ENSG00000211896.5	ENST00000390548	hsa-miR-503-5p	105737549	105737555	7mer-m8	105737548	105737566	151	-20.84
CAediting_1524209	chrX_134546392_-	ENSG00000211896.5	ENST00000390548	hsa-miR-503-5p	105737165	105737171	7mer-m8	105737164	105737186	140	-14.3
CAediting_524911	chr7_5495852_-	ENSG00000211896.5	ENST00000390548	hsa-miR-589-3p	105737186	105737193	8mer-1a	105737186	105737208	154	-20.91
CAediting_580943	chr7_100356700_+	ENSG00000211896.5	ENST00000390548	hsa-miR-6840-3p	105736473	105736479	7mer-m8	105736472	105736497	148	-27.4
CAediting_580943	chr7_100356700_+	ENSG00000211896.5	ENST00000390548	hsa-miR-6840-3p	105737150	105737157	8mer-1a	105737150	105737171	148	-22.03

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for IGHG1

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST

ENST type

RNA structure without RNA A-to-I editing.

RNA structure with RNA A-to-I editing.

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID

ENST

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

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Relation with ADAR for IGHG1

Correlation between ADAR gene expression and RNA editing frequency

Cancer	CAeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
COAD	CAediting_1022734	chr14_105863223_-	.	.	.	.	0.0496897812442481	0.166206595039105
LAML	CAediting_1022734	chr14_105863223_-	.	.	0.0372508219599206	0.260988102959745	.	.
SKCM	CAediting_1022734	chr14_105863223_-	0.0472195855246327	0.208603047384736	.	.	.	.
BRCA	CAediting_1022741	chr14_105864634_-	0.00698578075092162	0.27085269020044	.	.	.	.
HNSC	CAediting_1022741	chr14_105864634_-	0.0120259152262335	0.339483375454819	.	.	.	.
LUAD	CAediting_1022762	chr14_105939962_-	.	.	0.0387037231968945	0.265416628374762	.	.
HNSC	CAediting_1022786	chr14_106005227_-	.	.	0.0140981742412358	0.318040601757706	.	.
LUAD	CAediting_1022788	chr14_106005291_-	0.033872504997127	0.21456283793509	.	.	.	.
COAD	CAediting_1022788	chr14_106005291_-	.	.	0.0464310754273789	0.244193423630342	0.023604252445013	0.276323814010831
LUSC	CAediting_1022788	chr14_106005291_-	.	.	.	.	0.00940579612829783	0.272353170908162
BRCA	CAediting_1022809	chr14_106038088_-	0.0486684554465611	0.20502905349071	.	.	.	.
BRCA	CAediting_1022814	chr14_106055606_-	0.0182384652610627	0.173423311956585	.	.	.	.
BRCA	CAediting_1022817	chr14_106055613_-	.	.	.	.	0.011081323392729	0.260929555302046
CESC	CAediting_1022818	chr14_106055617_-	.	.	.	.	0.0475610517757636	0.218154070931089
BRCA	CAediting_1022825	chr14_106062287_-	.	.	2.2286684180363e-05	0.392467916232485	.	.
LUAD	CAediting_1022855	chr14_106129716_-	.	.	0.00556335810117754	0.379214841181217	.	.
BRCA	CAediting_1022862	chr14_106146014_-	0.0125497751384856	0.276239946276943	.	.	.	.
HNSC	CAediting_1022862	chr14_106146014_-	.	.	.	.	0.0403900526122398	0.285246239674718
LUAD	CAediting_1022863	chr14_106153629_-	.	.	.	.	0.0271022016434956	0.134511168185781
SKCM	CAediting_1022863	chr14_106153629_-	0.0328583272041292	0.269240417489156	.	.	.	.
BRCA	CAediting_1022865	chr14_106153657_-	0.000997047350754984	0.407959051076467	0.0304274565066365	0.275158868890814	.	.
BRCA	CAediting_1022870	chr14_106153689_-	0.0117317553216821	0.211704925529849	.	.	.	.
BRCA	CAediting_1022879	chr14_106153764_-	.	.	.	.	0.0416762258251096	0.1491072188735
LUSC	CAediting_1022879	chr14_106153764_-	0.000457127128460701	0.324340852124547	.	.	.	.
PRAD	CAediting_1022879	chr14_106153764_-	.	.	.	.	0.0180083646506006	0.302003187459658
STAD	CAediting_1022879	chr14_106153764_-	0.0438076985483047	0.224612054714893	.	.	.	.
BRCA	CAediting_1022892	chr14_106185032_-	0.0485409182315951	0.247601134614952	.	.	.	.
CESC	CAediting_1022898	chr14_106196890_-	.	.	.	.	0.0327193332132212	0.271616480141841
BRCA	CAediting_1022900	chr14_106196902_-	0.00965429669988841	0.261567933748237	.	.	.	.
BRCA	CAediting_1022931	chr14_106235201_-	.	.	0.0400193629353535	0.100011095674243	.	.
LUSC	CAediting_1022931	chr14_106235201_-	.	.	.	.	0.0265719427115023	0.137812645866
KIRP	CAediting_1022931	chr14_106235201_-	.	.	.	.	0.0389132199611043	0.271947670589493
ESCA	CAediting_1022931	chr14_106235201_-	.	.	.	.	0.0036690462814928	0.372492856841847
BLCA	CAediting_1022932	chr14_106235261_-	0.000453741555183364	0.425674467265164	.	.	.	.
COAD	CAediting_1022932	chr14_106235261_-	0.0197163326419576	0.223086201919603	.	.	.	.
BRCA	CAediting_1022934	chr14_106268604_-	0.0397790386486866	0.16428574108114	.	.	.	.
LUAD	CAediting_1022947	chr14_106268811_-	.	.	.	.	0.0221683713567999	0.285579457720317
LUSC	CAediting_1022961	chr14_106301402_-	.	.	.	.	0.00110831063919331	0.447877127647251
LUAD	CAediting_1022963	chr14_106301437_-	.	.	.	.	0.00840196133210928	0.221943008845846
LUAD	CAediting_1022968	chr14_106301466_-	.	.	.	.	0.00669370591729331	0.343664809400953
LUSC	CAediting_1022968	chr14_106301466_-	.	.	0.0427803329086598	0.266969165656229	.	.
LUAD	CAediting_1022971	chr14_106301478_-	.	.	.	.	2.87646481582556e-08	0.690506350472854
LUSC	CAediting_1022977	chr14_106301519_-	.	.	.	.	0.0211390631167686	0.231493681986705
LUSC	CAediting_1022980	chr14_106301526_-	.	.	.	.	0.0122432482035845	0.329769695383059
LUSC	CAediting_1022981	chr14_106301530_-	.	.	.	.	0.00192401665054598	0.331757874581257
BRCA	CAediting_1022994	chr14_106324334_-	.	.	.	.	0.0137614259954976	0.109671093618124
PAAD	CAediting_1022994	chr14_106324334_-	.	.	0.0353467609738061	0.224661980986616	.	.
BRCA	CAediting_1022997	chr14_106324381_-	0.043760962927425	0.14203289413973	.	.	.	.
LUSC	CAediting_1022997	chr14_106324381_-	0.000446493214293216	0.372528245655618	.	.	0.00662757239266873	0.29234864637317
BRCA	CAediting_1023007	chr14_106335207_-	.	.	.	.	0.0193717987267447	0.116156419480258
ESCA	CAediting_1023007	chr14_106335207_-	0.0107287665890222	0.324495777023854	.	.	0.00161793869238532	0.395258511891268
OV	CAediting_1023007	chr14_106335207_-	.	.	.	.	0.0420831560720179	0.219720171443818
PAAD	CAediting_1023007	chr14_106335207_-	.	.	.	.	0.0397589279057567	0.228985480704175
SKCM	CAediting_1023011	chr14_106349334_-	0.0187434232807185	0.239540511047185	.	.	.	.
STAD	CAediting_1023019	chr14_106349363_-	.	.	0.00753534430209832	0.201943798448042	.	.
BRCA	CAediting_1023021	chr14_106349374_-	.	.	.	.	6.54955581956687e-05	0.464688655353274
LUAD	CAediting_1023023	chr14_106349385_-	0.00255960791430715	0.37651679249388	.	.	.	.
COAD	CAediting_1023024	chr14_106349386_-	.	.	.	.	0.0222603331731941	0.313505879248888
STAD	CAediting_1023026	chr14_106349407_-	0.0249856187787945	0.262277899605584	.	.	.	.
LUSC	CAediting_1023027	chr14_106349410_-	.	.	.	.	0.0372695878271359	0.200708637240286
BRCA	CAediting_1023028	chr14_106349425_-	.	.	.	.	0.0125025365990245	0.194652056111776
KIRC	CAediting_1023052	chr14_106373785_-	.	.	.	.	1.0302805033964e-07	0.65989301261289
BRCA	CAediting_1023066	chr14_106421812_-	0.00171010441840826	0.286922692782028	.	.	.	.
LUAD	CAediting_1023094	chr14_106537808_-	.	.	.	.	0.0156267248315095	0.255597718420742
STAD	CAediting_1023099	chr14_106537855_-	.	.	7.29374324267607e-05	0.391604878031701	.	.
BRCA	CAediting_1023100	chr14_106537860_-	.	.	0.020996578938338	0.216942237952306	.	.
STAD	CAediting_1023100	chr14_106537860_-	.	.	.	.	0.00357580219483463	0.310879174328
ESCA	CAediting_1023106	chr14_106537949_-	0.0463833203147506	0.260400553103839	.	.	.	.

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Relation with cancer stages for IGHG1

Correlation between Cancer stages and RNA editing frequency

Cancer	Stage_type	CAeditomID	position	P-val	Coeff.
BLCA	pathologic_stage	CAediting_1022734	chr14_105863223_-	0.012037257093963	0.254054120891737
BRCA	pathologic_stage	CAediting_1022821	chr14_106055646_-	0.0331502878144224	-0.137285389463948
BRCA	pathologic_stage	CAediting_1022841	chr14_106116828_-	0.0391664998713106	-0.170315692875964
BRCA	pathologic_stage	CAediting_1022855	chr14_106129716_-	0.0325367027346532	-0.224334033917619
BRCA	pathologic_stage	CAediting_1022900	chr14_106196902_-	0.0198074080880892	-0.238743188310899
BRCA	pathologic_stage	CAediting_1022944	chr14_106268694_-	0.010216413718283	-0.246194409615489
BRCA	pathologic_stage	CAediting_1023027	chr14_106349410_-	0.041747140740812	-0.144482481286766
BRCA	pathologic_stage	CAediting_1023093	chr14_106537806_-	0.0236608902453651	0.276216036914562
COAD	pathologic_stage	CAediting_1022871	chr14_106153691_-	0.0365818046147736	0.272798625478312
COAD	pathologic_stage	CAediting_1022879	chr14_106153764_-	0.035003242126238	0.211103980304339
COAD	pathologic_stage	CAediting_1023028	chr14_106349425_-	0.0105634308907296	-0.322551077044869
ESCA	pathologic_stage	CAediting_1023007	chr14_106335207_-	0.00794265404433311	-0.351263276163307
HNSC	clinical_stage	CAediting_1022863	chr14_106153629_-	0.00190445833774278	-0.254029165004293
HNSC	clinical_stage	CAediting_1022996	chr14_106324357_-	0.0294920724832709	-0.254954449578375
HNSC	pathologic_stage	CAediting_1022860	chr14_106146008_-	0.0284569740264924	-0.33824120491533
HNSC	pathologic_stage	CAediting_1022863	chr14_106153629_-	0.00104798124296955	-0.284232668808095
HNSC	pathologic_stage	CAediting_1022934	chr14_106268604_-	0.0392052105401652	0.266969709058018
HNSC	pathologic_stage	CAediting_1022994	chr14_106324334_-	0.045538755376137	-0.152246377965156
HNSC	pathologic_stage	CAediting_1023099	chr14_106537855_-	0.0331108316382517	-0.260697369161808
KIRC	pathologic_stage	CAediting_1022994	chr14_106324334_-	0.032805919268315	-0.146323096113698
KIRP	clinical_stage	CAediting_1022994	chr14_106324334_-	0.030203918100107	0.338885211971139
LUAD	pathologic_stage	CAediting_1022859	chr14_106145990_-	0.0469235849795938	-0.241851658361109
LUAD	pathologic_stage	CAediting_1022861	chr14_106146009_-	0.0137677151930378	0.193201642997718
LUAD	pathologic_stage	CAediting_1022963	chr14_106301437_-	0.0246466128431552	0.190550328723381
LUAD	pathologic_stage	CAediting_1022980	chr14_106301526_-	0.0479288842639112	0.226182958680282
LUAD	pathologic_stage	CAediting_1023086	chr14_106470334_-	0.0210885445714553	0.307628055983657
LUAD	pathologic_stage	CAediting_1023094	chr14_106537808_-	0.0321471837554974	0.229946439110143
LUSC	pathologic_stage	CAediting_1022818	chr14_106055617_-	0.00781396307721119	0.151801381547222
LUSC	pathologic_stage	CAediting_1022900	chr14_106196902_-	0.00437715719834744	0.226275227301253
LUSC	pathologic_stage	CAediting_1022912	chr14_106210982_-	0.0283396612808323	0.274197067390848
LUSC	pathologic_stage	CAediting_1023028	chr14_106349425_-	0.00295316006866821	0.304986797172345
READ	pathologic_stage	CAediting_1023011	chr14_106349334_-	0.0175359026240035	0.331362865986444
STAD	pathologic_stage	CAediting_1022817	chr14_106055613_-	0.0376886385731068	0.307414127994652
STAD	pathologic_stage	CAediting_1022991	chr14_106324320_-	0.0162688512783969	0.325636018264033
STAD	pathologic_stage	CAediting_1022994	chr14_106324334_-	0.00526196788861553	-0.188387262201486
STAD	pathologic_stage	CAediting_1023019	chr14_106349363_-	0.0227590034529587	0.176706762138773
STAD	pathologic_stage	CAediting_1023029	chr14_106349467_-	0.0477109024594078	-0.229417203824378
STAD	pathologic_stage	CAediting_1023100	chr14_106537860_-	0.0477343452768789	-0.219321486576533
THCA	pathologic_stage	CAediting_1022931	chr14_106235201_-	0.0174743002449545	0.199195265572316
THCA	pathologic_stage	CAediting_1023019	chr14_106349363_-	0.0342340023867218	0.248203649755824
THCA	pathologic_stage	CAediting_1023044	chr14_106359915_-	0.0333694518585011	0.227078947577464
UCEC	clinical_stage	CAediting_1022931	chr14_106235201_-	0.0240994224300148	-0.20936239612158

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Relation with survival for IGHG1

Correlation between RNA editing and survival

Cancer	CAeditomID	position	KMpvalue	Coxpvalue	CoxHR
BLCA	CAediting_1022816	chr14_106055612_-	0.00776378166501879	0.0435759	76.496
BRCA	CAediting_1022841	chr14_106116828_-	0.0496420652595078	0.0366682	19.1314
BRCA	CAediting_1023037	chr14_106359861_-	0.0136169171622447	0.0364529	724.856
LUAD	CAediting_1022991	chr14_106324320_-	0.0111191900246214	0.0338268	102.087
LUAD	CAediting_1023052	chr14_106373785_-	0.0393627493643287	0.0305088	13.6809
COAD	CAediting_1022994	chr14_106324334_-	0.0168240271455014	0.0214036	0.0292696
LUSC	CAediting_1022786	chr14_106005227_-	0.0451988282108354	0.00315901	0.0125468
LUSC	CAediting_1022855	chr14_106129716_-	0.0215475726140428	0.0119958	0.00303668
STAD	CAediting_1022821	chr14_106055646_-	0.0474816466438895	0.0333778	8.50647
LAML	CAediting_1023106	chr14_106537949_-	0.0497485417149544	0.013884	2587.83

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RelatedDrugs for IGHG1

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene	UniProtAcc	DrugBank ID	Drug name	Drug activity	Drug type	Drug status
IGHG1	P01857	DB09130	Copper	Ig gamma-1 chain C region	SmallMoleculeDrug	approved\|investigational
IGHG1	P01857	DB15258	Imlifidase	Ig gamma-1 chain C region	BiotechDrug	approved\|investigational

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RelatedDiseases for IGHG1

Diseases associated with this gene.
(DisGeNet 7.0)

Gene	Disease ID	Disease name	# pubmeds	Source
IGHG1	C0027121	Myositis	1	CTD_human
IGHG1	C0032460	Polycystic Ovary Syndrome	1	CTD_human
IGHG1	C0158353	Infectious Myositis	1	CTD_human
IGHG1	C0544796	Myositis, Proliferative	1	CTD_human
IGHG1	C0751356	Idiopathic Inflammatory Myopathies	1	CTD_human
IGHG1	C0751357	Myositis, Focal	1	CTD_human
IGHG1	C1136382	Sclerocystic Ovaries	1	CTD_human

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene