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Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with cancer stages

Soverview

Relation with survival state

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene

Editing gene: SERINC2 (CAeditome ID:347735)

Gene summary for SERINC2

check button Gene summary
Gene informationGene symbol

SERINC2

Gene ID

347735

Gene nameserine incorporator 2
SynonymsFKSG84|PRO0899|TDE2|TDE2L
Cytomap

1p35.2

Type of geneprotein-coding
Descriptionserine incorporator 2tumor differentially expressed protein 2
Modification date20210518
UniProtAcc

Q96SA4

Context

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID

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RNA A-to-I events for SERINC2

check buttonRNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.
all structure

check button RNA editing frequencies across 33 cancers of gene: ENSG00000168528.10
boxplot

check button RNA A-to-I editing events in Cancer.
CAediting_37378(31415606, +), CAediting_37379(31416782, +), CAediting_37380(31416801, +), CAediting_37381(31416813, +), CAediting_37382(31416819, +), CAediting_37383(31416820, +), CAediting_37384(31416824, +), CAediting_37385(31416837, +), CAediting_37386(31416849, +), CAediting_37387(31416859, +), CAediting_37388(31416861, +), CAediting_37389(31416886, +), CAediting_37390(31416900, +), CAediting_37391(31416903, +), CAediting_37392(31416907, +), CAediting_37393(31416929, +), CAediting_37394(31416955, +), CAediting_37395(31416963, +), CAediting_37396(31416981, +), CAediting_37397(31416982, +), CAediting_37398(31416994, +), CAediting_37399(31416996, +), CAediting_37400(31417913, +), CAediting_37401(31417918, +), CAediting_37402(31417957, +), CAediting_37403(31417960, +), CAediting_37404(31417961, +), CAediting_37405(31417974, +), CAediting_37406(31417986, +), CAediting_37407(31418093, +), CAediting_37408(31418120, +), CAediting_37409(31418126, +), CAediting_37410(31418396, +), CAediting_37411(31418401, +), CAediting_37412(31418445, +), CAediting_37413(31418450, +), CAediting_37414(31418455, +), CAediting_37415(31418456, +), CAediting_37416(31418476, +), CAediting_37417(31418493, +), CAediting_37418(31418494, +), CAediting_37419(31418511, +), CAediting_37420(31418517, +), CAediting_37421(31418518, +), CAediting_37422(31418550, +), CAediting_37423(31418584, +), CAediting_37424(31418595, +), CAediting_37425(31418596, +), CAediting_37426(31418597, +), CAediting_37427(31418609, +), CAediting_37428(31418637, +), CAediting_37429(31418649, +), CAediting_37430(31418655, +), CAediting_37431(31419550, +), CAediting_37432(31419554, +), CAediting_37433(31419564, +), CAediting_37434(31419570, +), CAediting_37435(31419572, +), CAediting_37436(31419573, +), CAediting_37437(31419594, +), CAediting_37438(31419595, +), CAediting_37439(31419613, +), CAediting_37440(31419618, +), CAediting_37441(31419621, +), CAediting_37442(31419626, +), CAediting_37443(31419627, +), CAediting_37444(31419629, +), CAediting_37445(31419642, +), CAediting_37446(31419667, +), CAediting_37447(31419668, +), CAediting_37448(31419669, +), CAediting_37449(31419670, +), CAediting_37450(31419671, +), CAediting_37451(31419673, +), CAediting_37452(31419675, +), CAediting_37453(31419676, +), CAediting_37454(31419677, +), CAediting_37455(31419678, +), CAediting_37456(31419679, +), CAediting_37457(31419682, +), CAediting_37458(31419700, +), CAediting_37459(31419714, +), CAediting_37460(31419718, +), CAediting_37461(31419731, +), CAediting_37462(31419738, +), CAediting_37463(31419749, +), CAediting_37464(31419754, +), CAediting_37465(31419784, +), CAediting_37466(31419786, +), CAediting_37467(31419862, +), CAediting_37468(31419894, +), CAediting_37469(31419911, +), CAediting_37470(31419929, +), CAediting_37471(31419950, +), CAediting_37472(31419966, +), CAediting_37473(31419991, +), CAediting_37474(31419993, +), CAediting_37475(31419994, +), CAediting_37476(31419997, +), CAediting_37477(31422027, +), CAediting_37478(31422035, +), CAediting_37479(31422043, +), CAediting_37480(31422044, +), CAediting_37481(31422074, +), CAediting_37482(31422098, +), CAediting_37483(31422113, +), CAediting_37484(31422134, +), CAediting_37485(31422136, +), CAediting_37486(31422138, +), CAediting_37487(31422139, +), CAediting_37488(31422140, +), CAediting_37489(31422141, +), CAediting_37490(31422146, +), CAediting_37491(31422147, +), CAediting_37492(31422148, +), CAediting_37493(31422152, +), CAediting_37494(31422178, +), CAediting_37495(31422192, +), CAediting_37496(31422219, +), CAediting_37497(31422224, +), CAediting_37498(31422281, +), CAediting_37499(31422374, +), CAediting_37500(31422379, +), CAediting_37501(31422386, +), CAediting_37502(31422399, +), CAediting_37503(31422400, +), CAediting_37504(31422425, +), CAediting_37505(31422426, +), CAediting_37506(31422427, +), CAediting_37507(31422428, +), CAediting_37508(31422439, +), CAediting_37509(31422448, +), CAediting_37510(31428143, +), CAediting_37511(31430504, +), CAediting_37512(31430506, +), CAediting_37513(31430507, +), CAediting_37514(31430508, +), CAediting_37515(31430520, +), CAediting_37516(31430523, +), CAediting_37517(31430550, +), CAediting_37518(31430556, +), CAediting_37519(31430564, +), CAediting_37520(31430577, +), CAediting_37521(31430586, +), CAediting_37522(31431144, +), CAediting_37523(31431146, +), CAediting_37524(31431224, +), CAediting_37525(31431225, +), CAediting_37526(31431237, +), CAediting_37527(31431242, +), CAediting_37528(31431259, +), CAediting_37529(31431274, +), CAediting_37530(31431319, +), CAediting_37531(31431325, +), CAediting_37532(31431349, +), CAediting_37533(31431350, +), CAediting_37534(31431361, +), CAediting_37535(31431365, +), CAediting_37536(31431366, +), CAediting_37537(31431374, +), CAediting_37538(31431379, +), CAediting_37539(31431388, +), CAediting_37540(31431401, +), CAediting_37541(31431403, +), CAediting_37542(31431406, +), CAediting_37543(31432734, +), CAediting_37544(31432741, +), CAediting_37545(31432746, +), CAediting_37546(31432753, +), CAediting_37547(31432772, +), CAediting_37548(31432777, +), CAediting_37549(31432778, +), CAediting_37550(31432791, +),

Top

RNA editing positional annotations for SERINC2 using Annovar

check button Protein coding RNA editing(s).
CAeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred

check button Gene structure information of RNA editing(s).
CAeditome IDPositionVariant type
CAediting_37378chr1_31415606_+ncRNA_intronic
CAediting_37379chr1_31416782_+ncRNA_intronic
CAediting_37380chr1_31416801_+ncRNA_intronic
CAediting_37381chr1_31416813_+ncRNA_intronic
CAediting_37382chr1_31416819_+ncRNA_intronic
CAediting_37383chr1_31416820_+ncRNA_intronic
CAediting_37384chr1_31416824_+ncRNA_intronic
CAediting_37385chr1_31416837_+ncRNA_intronic
CAediting_37386chr1_31416849_+ncRNA_intronic
CAediting_37387chr1_31416859_+ncRNA_intronic
CAediting_37388chr1_31416861_+ncRNA_intronic
CAediting_37389chr1_31416886_+ncRNA_intronic
CAediting_37390chr1_31416900_+ncRNA_intronic
CAediting_37391chr1_31416903_+ncRNA_intronic
CAediting_37392chr1_31416907_+ncRNA_intronic
CAediting_37393chr1_31416929_+ncRNA_intronic
CAediting_37394chr1_31416955_+ncRNA_intronic
CAediting_37395chr1_31416963_+ncRNA_intronic
CAediting_37396chr1_31416981_+ncRNA_intronic
CAediting_37397chr1_31416982_+ncRNA_intronic
CAediting_37398chr1_31416994_+ncRNA_intronic
CAediting_37399chr1_31416996_+ncRNA_intronic
CAediting_37400chr1_31417913_+ncRNA_intronic
CAediting_37401chr1_31417918_+ncRNA_intronic
CAediting_37402chr1_31417957_+ncRNA_intronic
CAediting_37403chr1_31417960_+ncRNA_intronic
CAediting_37404chr1_31417961_+ncRNA_intronic
CAediting_37405chr1_31417974_+ncRNA_intronic
CAediting_37406chr1_31417986_+ncRNA_intronic
CAediting_37407chr1_31418093_+ncRNA_intronic
CAediting_37408chr1_31418120_+ncRNA_intronic
CAediting_37409chr1_31418126_+ncRNA_intronic
CAediting_37410chr1_31418396_+ncRNA_intronic
CAediting_37411chr1_31418401_+ncRNA_intronic
CAediting_37412chr1_31418445_+ncRNA_intronic
CAediting_37413chr1_31418450_+ncRNA_intronic
CAediting_37414chr1_31418455_+ncRNA_intronic
CAediting_37415chr1_31418456_+ncRNA_intronic
CAediting_37416chr1_31418476_+ncRNA_intronic
CAediting_37417chr1_31418493_+ncRNA_intronic
CAediting_37418chr1_31418494_+ncRNA_intronic
CAediting_37419chr1_31418511_+ncRNA_intronic
CAediting_37420chr1_31418517_+ncRNA_intronic
CAediting_37421chr1_31418518_+ncRNA_intronic
CAediting_37422chr1_31418550_+ncRNA_intronic
CAediting_37423chr1_31418584_+ncRNA_intronic
CAediting_37424chr1_31418595_+ncRNA_intronic
CAediting_37425chr1_31418596_+ncRNA_intronic
CAediting_37426chr1_31418597_+ncRNA_intronic
CAediting_37427chr1_31418609_+ncRNA_intronic
CAediting_37428chr1_31418637_+ncRNA_intronic
CAediting_37429chr1_31418649_+ncRNA_intronic
CAediting_37430chr1_31418655_+ncRNA_intronic
CAediting_37431chr1_31419550_+ncRNA_intronic
CAediting_37432chr1_31419554_+ncRNA_intronic
CAediting_37433chr1_31419564_+ncRNA_intronic
CAediting_37434chr1_31419570_+ncRNA_intronic
CAediting_37435chr1_31419572_+ncRNA_intronic
CAediting_37436chr1_31419573_+ncRNA_intronic
CAediting_37437chr1_31419594_+ncRNA_intronic
CAediting_37438chr1_31419595_+ncRNA_intronic
CAediting_37439chr1_31419613_+ncRNA_intronic
CAediting_37440chr1_31419618_+ncRNA_intronic
CAediting_37441chr1_31419621_+ncRNA_intronic
CAediting_37442chr1_31419626_+ncRNA_intronic
CAediting_37443chr1_31419627_+ncRNA_intronic
CAediting_37444chr1_31419629_+ncRNA_intronic
CAediting_37445chr1_31419642_+ncRNA_intronic
CAediting_37446chr1_31419667_+ncRNA_intronic
CAediting_37447chr1_31419668_+ncRNA_intronic
CAediting_37448chr1_31419669_+ncRNA_intronic
CAediting_37449chr1_31419670_+ncRNA_intronic
CAediting_37450chr1_31419671_+ncRNA_intronic
CAediting_37451chr1_31419673_+ncRNA_intronic
CAediting_37452chr1_31419675_+ncRNA_intronic
CAediting_37453chr1_31419676_+ncRNA_intronic
CAediting_37454chr1_31419677_+ncRNA_intronic
CAediting_37455chr1_31419678_+ncRNA_intronic
CAediting_37456chr1_31419679_+ncRNA_intronic
CAediting_37457chr1_31419682_+ncRNA_intronic
CAediting_37458chr1_31419700_+ncRNA_intronic
CAediting_37459chr1_31419714_+ncRNA_intronic
CAediting_37460chr1_31419718_+ncRNA_intronic
CAediting_37461chr1_31419731_+ncRNA_intronic
CAediting_37462chr1_31419738_+ncRNA_intronic
CAediting_37463chr1_31419749_+ncRNA_intronic
CAediting_37464chr1_31419754_+ncRNA_intronic
CAediting_37465chr1_31419784_+ncRNA_intronic
CAediting_37466chr1_31419786_+ncRNA_intronic
CAediting_37467chr1_31419862_+ncRNA_intronic
CAediting_37468chr1_31419894_+ncRNA_intronic
CAediting_37469chr1_31419911_+ncRNA_intronic
CAediting_37470chr1_31419929_+ncRNA_intronic
CAediting_37471chr1_31419950_+ncRNA_intronic
CAediting_37472chr1_31419966_+ncRNA_intronic
CAediting_37473chr1_31419991_+ncRNA_intronic
CAediting_37474chr1_31419993_+ncRNA_intronic
CAediting_37475chr1_31419994_+ncRNA_intronic
CAediting_37476chr1_31419997_+ncRNA_intronic
CAediting_37477chr1_31422027_+ncRNA_intronic
CAediting_37478chr1_31422035_+ncRNA_intronic
CAediting_37479chr1_31422043_+ncRNA_intronic
CAediting_37480chr1_31422044_+ncRNA_intronic
CAediting_37481chr1_31422074_+ncRNA_intronic
CAediting_37482chr1_31422098_+ncRNA_intronic
CAediting_37483chr1_31422113_+ncRNA_intronic
CAediting_37484chr1_31422134_+ncRNA_intronic
CAediting_37485chr1_31422136_+ncRNA_intronic
CAediting_37486chr1_31422138_+ncRNA_intronic
CAediting_37487chr1_31422139_+ncRNA_intronic
CAediting_37488chr1_31422140_+ncRNA_intronic
CAediting_37489chr1_31422141_+ncRNA_intronic
CAediting_37490chr1_31422146_+ncRNA_intronic
CAediting_37491chr1_31422147_+ncRNA_intronic
CAediting_37492chr1_31422148_+ncRNA_intronic
CAediting_37493chr1_31422152_+ncRNA_intronic
CAediting_37494chr1_31422178_+ncRNA_intronic
CAediting_37495chr1_31422192_+ncRNA_intronic
CAediting_37496chr1_31422219_+ncRNA_intronic
CAediting_37497chr1_31422224_+ncRNA_intronic
CAediting_37498chr1_31422281_+ncRNA_intronic
CAediting_37499chr1_31422374_+ncRNA_intronic
CAediting_37500chr1_31422379_+ncRNA_intronic
CAediting_37501chr1_31422386_+ncRNA_intronic
CAediting_37502chr1_31422399_+ncRNA_intronic
CAediting_37503chr1_31422400_+ncRNA_intronic
CAediting_37504chr1_31422425_+ncRNA_intronic
CAediting_37505chr1_31422426_+ncRNA_intronic
CAediting_37506chr1_31422427_+ncRNA_intronic
CAediting_37507chr1_31422428_+ncRNA_intronic
CAediting_37508chr1_31422439_+ncRNA_intronic
CAediting_37509chr1_31422448_+ncRNA_intronic
CAediting_37510chr1_31428143_+ncRNA_intronic
CAediting_37511chr1_31430504_+ncRNA_intronic
CAediting_37512chr1_31430506_+ncRNA_intronic
CAediting_37513chr1_31430507_+ncRNA_intronic
CAediting_37514chr1_31430508_+ncRNA_intronic
CAediting_37515chr1_31430520_+ncRNA_intronic
CAediting_37516chr1_31430523_+ncRNA_intronic
CAediting_37517chr1_31430550_+ncRNA_intronic
CAediting_37518chr1_31430556_+ncRNA_intronic
CAediting_37519chr1_31430564_+ncRNA_intronic
CAediting_37520chr1_31430577_+ncRNA_intronic
CAediting_37521chr1_31430586_+ncRNA_intronic
CAediting_37522chr1_31431144_+ncRNA_intronic
CAediting_37523chr1_31431146_+ncRNA_intronic
CAediting_37524chr1_31431224_+ncRNA_intronic
CAediting_37525chr1_31431225_+ncRNA_intronic
CAediting_37526chr1_31431237_+ncRNA_intronic
CAediting_37527chr1_31431242_+ncRNA_intronic
CAediting_37528chr1_31431259_+ncRNA_intronic
CAediting_37529chr1_31431274_+ncRNA_intronic
CAediting_37530chr1_31431319_+ncRNA_intronic
CAediting_37531chr1_31431325_+ncRNA_intronic
CAediting_37532chr1_31431349_+ncRNA_intronic
CAediting_37533chr1_31431350_+ncRNA_intronic
CAediting_37534chr1_31431361_+ncRNA_intronic
CAediting_37535chr1_31431365_+ncRNA_intronic
CAediting_37536chr1_31431366_+ncRNA_intronic
CAediting_37537chr1_31431374_+ncRNA_intronic
CAediting_37538chr1_31431379_+ncRNA_intronic
CAediting_37539chr1_31431388_+ncRNA_intronic
CAediting_37540chr1_31431401_+ncRNA_intronic
CAediting_37541chr1_31431403_+ncRNA_intronic
CAediting_37542chr1_31431406_+ncRNA_intronic
CAediting_37543chr1_31432734_+ncRNA_intronic
CAediting_37544chr1_31432741_+ncRNA_intronic
CAediting_37545chr1_31432746_+ncRNA_intronic
CAediting_37546chr1_31432753_+ncRNA_intronic
CAediting_37547chr1_31432772_+ncRNA_intronic
CAediting_37548chr1_31432777_+ncRNA_intronic
CAediting_37549chr1_31432778_+ncRNA_intronic
CAediting_37550chr1_31432791_+ncRNA_intronic

check button Repat-regional RNA editing(s).
CAeditome IDPositionRepeat familyRepeat sub familyRepeat name
CAediting_37378chr1_31415606_+SINEMIRMIRb
CAediting_37379chr1_31416782_+SINEAluAluSz
CAediting_37380chr1_31416801_+SINEAluAluSz
CAediting_37381chr1_31416813_+SINEAluAluSz
CAediting_37382chr1_31416819_+SINEAluAluSz
CAediting_37383chr1_31416820_+SINEAluAluSz
CAediting_37384chr1_31416824_+SINEAluAluSz
CAediting_37385chr1_31416837_+SINEAluAluSz
CAediting_37386chr1_31416849_+SINEAluAluSz
CAediting_37387chr1_31416859_+SINEAluAluSz
CAediting_37388chr1_31416861_+SINEAluAluSz
CAediting_37389chr1_31416886_+SINEAluAluSz
CAediting_37390chr1_31416900_+SINEAluAluSz
CAediting_37391chr1_31416903_+SINEAluAluSz
CAediting_37392chr1_31416907_+SINEAluAluSz
CAediting_37393chr1_31416929_+SINEAluAluSz
CAediting_37394chr1_31416955_+SINEAluAluSz
CAediting_37395chr1_31416963_+SINEAluAluSz
CAediting_37396chr1_31416981_+SINEAluAluSz
CAediting_37397chr1_31416982_+SINEAluAluSz
CAediting_37398chr1_31416994_+SINEAluAluSz
CAediting_37399chr1_31416996_+SINEAluAluSz
CAediting_37400chr1_31417913_+SINEAluAluSx
CAediting_37401chr1_31417918_+SINEAluAluSx
CAediting_37402chr1_31417957_+SINEAluAluSx
CAediting_37403chr1_31417960_+SINEAluAluSx
CAediting_37404chr1_31417961_+SINEAluAluSx
CAediting_37405chr1_31417974_+SINEAluAluSx
CAediting_37406chr1_31417986_+SINEAluAluSx
CAediting_37407chr1_31418093_+SINEAluAluSx
CAediting_37408chr1_31418120_+SINEAluAluSx
CAediting_37409chr1_31418126_+SINEAluAluSx
CAediting_37410chr1_31418396_+SINEAluAluSx1
CAediting_37411chr1_31418401_+SINEAluAluSx1
CAediting_37412chr1_31418445_+SINEAluAluSx1
CAediting_37413chr1_31418450_+SINEAluAluSx1
CAediting_37414chr1_31418455_+SINEAluAluSx1
CAediting_37415chr1_31418456_+SINEAluAluSx1
CAediting_37416chr1_31418476_+SINEAluAluSx1
CAediting_37417chr1_31418493_+SINEAluAluSx1
CAediting_37418chr1_31418494_+SINEAluAluSx1
CAediting_37419chr1_31418511_+SINEAluAluSx1
CAediting_37420chr1_31418517_+SINEAluAluSx1
CAediting_37421chr1_31418518_+SINEAluAluSx1
CAediting_37422chr1_31418550_+SINEAluAluSx1
CAediting_37423chr1_31418584_+SINEAluAluSx1
CAediting_37424chr1_31418595_+SINEAluAluSx1
CAediting_37425chr1_31418596_+SINEAluAluSx1
CAediting_37426chr1_31418597_+SINEAluAluSx1
CAediting_37427chr1_31418609_+SINEAluAluSx1
CAediting_37428chr1_31418637_+SINEAluAluSx1
CAediting_37429chr1_31418649_+SINEAluAluSx1
CAediting_37430chr1_31418655_+SINEAluAluSx1
CAediting_37431chr1_31419550_+SINEAluAluJb
CAediting_37432chr1_31419554_+SINEAluAluJb
CAediting_37433chr1_31419564_+SINEAluAluJb
CAediting_37434chr1_31419570_+SINEAluAluJb
CAediting_37435chr1_31419572_+SINEAluAluJb
CAediting_37436chr1_31419573_+SINEAluAluJb
CAediting_37437chr1_31419594_+SINEAluAluJb
CAediting_37438chr1_31419595_+SINEAluAluJb
CAediting_37439chr1_31419613_+SINEAluAluJb
CAediting_37440chr1_31419618_+SINEAluAluJb
CAediting_37441chr1_31419621_+SINEAluAluJb
CAediting_37442chr1_31419626_+SINEAluAluJb
CAediting_37443chr1_31419627_+SINEAluAluJb
CAediting_37444chr1_31419629_+SINEAluAluJb
CAediting_37445chr1_31419642_+SINEAluAluJb
CAediting_37446chr1_31419667_+SINEAluAluJb
CAediting_37447chr1_31419668_+SINEAluAluJb
CAediting_37448chr1_31419669_+SINEAluAluJb
CAediting_37449chr1_31419670_+SINEAluAluJb
CAediting_37450chr1_31419671_+SINEAluAluJb
CAediting_37451chr1_31419673_+SINEAluAluJb
CAediting_37452chr1_31419675_+SINEAluAluJb
CAediting_37453chr1_31419676_+SINEAluAluJb
CAediting_37454chr1_31419677_+SINEAluAluJb
CAediting_37455chr1_31419678_+SINEAluAluJb
CAediting_37456chr1_31419679_+SINEAluAluJb
CAediting_37457chr1_31419682_+SINEAluAluJb
CAediting_37458chr1_31419700_+SINEAluAluJb
CAediting_37459chr1_31419714_+SINEAluAluJb
CAediting_37460chr1_31419718_+SINEAluAluJb
CAediting_37461chr1_31419731_+SINEAluAluJb
CAediting_37462chr1_31419738_+SINEAluAluJb
CAediting_37463chr1_31419749_+SINEAluAluJb
CAediting_37464chr1_31419754_+SINEAluAluJb
CAediting_37465chr1_31419784_+SINEAluAluJb
CAediting_37466chr1_31419786_+SINEAluAluJb
CAediting_37467chr1_31419862_+SINEAluAluJb
CAediting_37468chr1_31419894_+SINEAluAluJb
CAediting_37469chr1_31419911_+SINEAluAluJb
CAediting_37470chr1_31419929_+SINEAluAluJb
CAediting_37471chr1_31419950_+SINEAluAluJb
CAediting_37472chr1_31419966_+SINEAluAluJb
CAediting_37473chr1_31419991_+SINEAluAluJb
CAediting_37474chr1_31419993_+SINEAluAluJb
CAediting_37475chr1_31419994_+SINEAluAluJb
CAediting_37476chr1_31419997_+SINEAluAluJb
CAediting_37477chr1_31422027_+SINEAluAluJb
CAediting_37478chr1_31422035_+SINEAluAluJb
CAediting_37479chr1_31422043_+SINEAluAluJb
CAediting_37480chr1_31422044_+SINEAluAluJb
CAediting_37481chr1_31422074_+SINEAluAluJb
CAediting_37482chr1_31422098_+SINEAluAluJb
CAediting_37483chr1_31422113_+SINEAluAluJb
CAediting_37484chr1_31422134_+SINEAluAluJb
CAediting_37485chr1_31422136_+SINEAluAluJb
CAediting_37486chr1_31422138_+SINEAluAluJb
CAediting_37487chr1_31422139_+SINEAluAluJb
CAediting_37488chr1_31422140_+SINEAluAluJb
CAediting_37489chr1_31422141_+SINEAluAluJb
CAediting_37490chr1_31422146_+SINEAluAluJb
CAediting_37491chr1_31422147_+SINEAluAluJb
CAediting_37492chr1_31422148_+SINEAluAluJb
CAediting_37493chr1_31422152_+SINEAluAluJb
CAediting_37494chr1_31422178_+SINEAluAluJb
CAediting_37495chr1_31422192_+SINEAluAluJb
CAediting_37496chr1_31422219_+SINEAluAluJb
CAediting_37497chr1_31422224_+SINEAluAluJb
CAediting_37498chr1_31422281_+SINEAluAluJb
CAediting_37499chr1_31422374_+SINEAluFLAM_C
CAediting_37500chr1_31422379_+SINEAluFLAM_C
CAediting_37501chr1_31422386_+SINEAluFLAM_C
CAediting_37502chr1_31422399_+SINEAluFLAM_C
CAediting_37503chr1_31422400_+SINEAluFLAM_C
CAediting_37504chr1_31422425_+SINEAluFLAM_C
CAediting_37505chr1_31422426_+SINEAluFLAM_C
CAediting_37506chr1_31422427_+SINEAluFLAM_C
CAediting_37507chr1_31422428_+SINEAluFLAM_C
CAediting_37508chr1_31422439_+SINEAluFLAM_C
CAediting_37509chr1_31422448_+SINEAluFLAM_C
CAediting_37510chr1_31428143_+SINEAluAluSx1
CAediting_37511chr1_31430504_+SINEAluAluJo
CAediting_37512chr1_31430506_+SINEAluAluJo
CAediting_37513chr1_31430507_+SINEAluAluJo
CAediting_37514chr1_31430508_+SINEAluAluJo
CAediting_37515chr1_31430520_+SINEAluAluJb
CAediting_37516chr1_31430523_+SINEAluAluJb
CAediting_37517chr1_31430550_+SINEAluAluJb
CAediting_37518chr1_31430556_+SINEAluAluJb
CAediting_37519chr1_31430564_+SINEAluAluJb
CAediting_37520chr1_31430577_+SINEAluAluJb
CAediting_37521chr1_31430586_+SINEAluAluJb
CAediting_37522chr1_31431144_+SINEAluAluJr
CAediting_37523chr1_31431146_+SINEAluAluJr
CAediting_37524chr1_31431224_+SINEAluAluJr
CAediting_37525chr1_31431225_+SINEAluAluJr
CAediting_37526chr1_31431237_+SINEAluAluJr
CAediting_37527chr1_31431242_+SINEAluAluJr
CAediting_37528chr1_31431259_+SINEAluAluJr
CAediting_37529chr1_31431274_+SINEAluAluJr
CAediting_37530chr1_31431319_+SINEAluAluJr
CAediting_37531chr1_31431325_+SINEAluAluJr
CAediting_37532chr1_31431349_+SINEAluAluJr
CAediting_37533chr1_31431350_+SINEAluAluJr
CAediting_37534chr1_31431361_+SINEAluAluJr
CAediting_37535chr1_31431365_+SINEAluAluJr
CAediting_37536chr1_31431366_+SINEAluAluJr
CAediting_37537chr1_31431374_+SINEAluAluJr
CAediting_37538chr1_31431379_+SINEAluAluJr
CAediting_37539chr1_31431388_+SINEAluAluJr
CAediting_37540chr1_31431401_+SINEAluAluJr
CAediting_37541chr1_31431403_+SINEAluAluJr
CAediting_37542chr1_31431406_+SINEAluAluJr
CAediting_37543chr1_31432734_+SINEMIRMIRb
CAediting_37544chr1_31432741_+SINEMIRMIRb
CAediting_37545chr1_31432746_+SINEMIRMIRb
CAediting_37546chr1_31432753_+SINEMIRMIRb
CAediting_37547chr1_31432772_+SINEMIRMIRb
CAediting_37548chr1_31432777_+SINEMIRMIRb
CAediting_37549chr1_31432778_+SINEMIRMIRb
CAediting_37550chr1_31432791_+SINEMIRMIRb

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RNA A-to-I editing events in the alternative splicing sites for SERINC2

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeCAeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength
ESCAediting_37411chr1_31418401_+31418401:314184233SS0+20iAACTCATGCTCTGTCACCCAGGC-8.71GACTCATGCTCTGTCACCCAGGC-8.43
IRCAediting_37411chr1_31418401_+31418401:314184233SS0+20iAACTCATGCTCTGTCACCCAGGC-8.71GACTCATGCTCTGTCACCCAGGC-8.43
ESCAediting_37422chr1_31418550_+31418540:314185623SS0+10iTAATTTTTGTATTTTTTGTAGAG-14.29TAATTTTTGTGTTTTTTGTAGAG-13.24
IRCAediting_37422chr1_31418550_+31418540:314185623SS0+10iTAATTTTTGTATTTTTTGTAGAG-14.29TAATTTTTGTGTTTTTTGTAGAG-13.24
MEX_2CAediting_37422chr1_31418550_+31418540:314185623SS0+10iTAATTTTTGTATTTTTTGTAGAG-14.29TAATTTTTGTGTTTTTTGTAGAG-13.24
ESCAediting_37427chr1_31418609_+31418608:314186165SS2+0iCAGGTAATC6.99CGGGTAATC4.59
IRCAediting_37427chr1_31418609_+31418608:314186165SS2+0iCAGGTAATC6.99CGGGTAATC4.59
MEX_2CAediting_37427chr1_31418609_+31418608:314186165SS2+0iCAGGTAATC6.99CGGGTAATC4.59
ESCAediting_37530chr1_31431319_+31431300:314313223SS0+1iACATTTTTTTTTTTTTTGTAGAG-11.68ACATTTTTTTTTTTTTTGTGGAG-2.93

check button Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000168528.10.SERINC2.
boxplot

check button Correlation between RNA A-to-I editing and PSI for ENSG00000168528.10.SERINC2.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for SERINC2

check button Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.
boxplot

check button Correlation between RNA A-to-I editing and gene expression.
boxplot

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.
ESCA.CAediting_37475.ENSG00000168528.SERINC2.png
Soverview
KIRC.CAediting_37506.ENSG00000168528.SERINC2.png
Soverview
STAD.CAediting_37393.ENSG00000168528.SERINC2.png
Soverview

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Protein coding region RNA A-to-I editings for SERINC2

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.


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The effects of the RNA editing to the miRNA binding sites for SERINC2

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_1368054chr19_46709310_-ENSG00000168528.10ENST00000373710hsa-miR-320e31434315314343217mer-m83143430531434322146-18.47
CAediting_1368054chr19_46709310_-ENSG00000168528.10ENST00000536859hsa-miR-320e31434315314343217mer-m83143430531434322146-18.47
CAediting_1368054chr19_46709310_-ENSG00000168528.10ENST00000373709hsa-miR-320e31434315314343217mer-m83143430531434322146-18.47
CAediting_1368054chr19_46709310_-ENSG00000168528.10ENST00000536384hsa-miR-320e31434315314343217mer-m83143430531434322146-18.47

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for SERINC2

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.

check button RNA A-to-I editing in RNA structures for Minimum free energy (MFE).
CAeditom_IDENSTEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI

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Relation with ADAR for SERINC2

check button Correlation between ADAR gene expression and RNA editing frequency
CancerCAeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)
ESCACAediting_37393chr1_31416929_+..0.03144442910216960.295920441303178..
ESCACAediting_37470chr1_31419929_+..0.04366879461226670.286518057257755..
BRCACAediting_37508chr1_31422439_+0.0001378361589467960.452231294228032....
STADCAediting_37508chr1_31422439_+0.002648288240053480.356410615420481....

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Relation with cancer stages for SERINC2

check button Correlation between Cancer stages and RNA editing frequency
CancerStage_typeCAeditomIDpositionP-valCoeff.

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Relation with survival for SERINC2

check button Correlation between RNA editing and survival
CancerCAeditomIDpositionKMpvalueCoxpvalueCoxHR

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RelatedDrugs for SERINC2

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for SERINC2

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease name# pubmedsSource
SERINC2C0001973Alcoholic Intoxication, Chronic1PSYGENET