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Editing gene: IGBP1 (CAeditome ID:3476)

Gene summary for IGBP1

Gene summary

Gene information	Gene symbol	IGBP1
	Gene ID	3476
	Gene name	immunoglobulin binding protein 1
	Synonyms	ALPHA-4\|IBP1\|alpha4
	Cytomap	Xq13.1
	Type of gene	protein-coding
	Description	immunoglobulin-binding protein 1B cell signal transduction molecule alpha 4CD79a-binding protein 1bA351K23.1 (immunoglobulin binding protein 1 (CD79A) )immunoglobulin (CD79A) binding protein 1protein alpha-4protein phosphatase 2/4/6 regulatory subun
	Modification date	20210518
	UniProtAcc	P78318
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene	GO ID	GO term	PubMed ID
IGBP1	GO:0019888	Immunoglobulin-binding protein 1	9647778

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RNA A-to-I events for IGBP1

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000089289.14

RNA A-to-I editing events in Cancer.

CAediting_1510356(70136740, +), CAediting_1510357(70136789, +), CAediting_1510358(70136790, +), CAediting_1510359(70136810, +), CAediting_1510360(70136813, +), CAediting_1510361(70136824, +), CAediting_1510362(70136836, +), CAediting_1510363(70136846, +), CAediting_1510364(70136848, +), CAediting_1510365(70136872, +), CAediting_1510366(70136887, +), CAediting_1510367(70136890, +), CAediting_1510368(70136916, +), CAediting_1510369(70136928, +), CAediting_1510370(70136929, +), CAediting_1510371(70136941, +), CAediting_1510372(70136954, +), CAediting_1510373(70136967, +), CAediting_1510374(70136969, +), CAediting_1510375(70137855, +), CAediting_1510376(70137877, +), CAediting_1510377(70137878, +), CAediting_1510378(70137883, +), CAediting_1510379(70137884, +), CAediting_1510380(70137926, +), CAediting_1510381(70137931, +), CAediting_1510382(70137932, +), CAediting_1510383(70137937, +), CAediting_1510384(70137947, +), CAediting_1510385(70137957, +), CAediting_1510386(70137985, +), CAediting_1510387(70138015, +), CAediting_1510388(70138016, +), CAediting_1510389(70138021, +), CAediting_1510390(70138032, +), CAediting_1510391(70138048, +), CAediting_1510392(70138056, +), CAediting_1510393(70138064, +), CAediting_1510394(70138077, +), CAediting_1510395(70138081, +), CAediting_1510396(70138106, +), CAediting_1510397(70138217, +), CAediting_1510398(70138225, +), CAediting_1510399(70138231, +), CAediting_1510400(70138247, +), CAediting_1510401(70138248, +), CAediting_1510402(70138261, +), CAediting_1510403(70138274, +), CAediting_1510404(70138279, +), CAediting_1510405(70138280, +), CAediting_1510406(70138282, +), CAediting_1510407(70138285, +), CAediting_1510408(70138290, +), CAediting_1510409(70138295, +), CAediting_1510410(70138298, +), CAediting_1510411(70138319, +), CAediting_1510412(70138332, +), CAediting_1510413(70138337, +), CAediting_1510414(70138340, +), CAediting_1510415(70138344, +), CAediting_1510416(70138366, +), CAediting_1510417(70138426, +), CAediting_1510418(70138441, +), CAediting_1510419(70138456, +), CAediting_1510420(70139090, +), CAediting_1510421(70139095, +), CAediting_1510422(70139100, +), CAediting_1510423(70139103, +), CAediting_1510424(70139114, +), CAediting_1510425(70139123, +), CAediting_1510426(70139124, +), CAediting_1510427(70139134, +), CAediting_1510428(70139152, +), CAediting_1510429(70139159, +), CAediting_1510430(70139163, +), CAediting_1510431(70139167, +), CAediting_1510432(70139171, +), CAediting_1510433(70139189, +), CAediting_1510434(70139190, +), CAediting_1510435(70139222, +), CAediting_1510436(70139235, +), CAediting_1510437(70139238, +), CAediting_1510438(70139251, +), CAediting_1510439(70139255, +), CAediting_1510440(70139260, +), CAediting_1510441(70139262, +), CAediting_1510442(70139267, +), CAediting_1510443(70141084, +), CAediting_1510444(70141090, +), CAediting_1510445(70141121, +), CAediting_1510446(70141126, +), CAediting_1510447(70141128, +), CAediting_1510448(70141129, +), CAediting_1510449(70141134, +), CAediting_1510450(70141143, +), CAediting_1510451(70141158, +), CAediting_1510452(70141168, +), CAediting_1510453(70141188, +), CAediting_1510454(70141191, +), CAediting_1510455(70141220, +), CAediting_1510456(70141227, +), CAediting_1510457(70141236, +), CAediting_1510458(70141296, +), CAediting_1510459(70141299, +), CAediting_1510460(70141334, +), CAediting_1510461(70141335, +), CAediting_1510462(70142078, +), CAediting_1510463(70142099, +), CAediting_1510464(70142100, +), CAediting_1510465(70142108, +), CAediting_1510466(70142137, +), CAediting_1510467(70142177, +), CAediting_1510468(70142186, +), CAediting_1510469(70142220, +), CAediting_1510470(70142227, +), CAediting_1510471(70142233, +), CAediting_1510472(70142251, +), CAediting_1510473(70142286, +), CAediting_1510474(70142563, +), CAediting_1510475(70142564, +), CAediting_1510476(70142590, +), CAediting_1510477(70142616, +), CAediting_1510478(70142632, +), CAediting_1510479(70142668, +), CAediting_1510480(70142669, +), CAediting_1510481(70142672, +), CAediting_1510482(70142698, +), CAediting_1510483(70142704, +), CAediting_1510484(70142721, +), CAediting_1510485(70142774, +), CAediting_1510486(70142776, +), CAediting_1510487(70143052, +), CAediting_1510488(70143062, +), CAediting_1510489(70143121, +), CAediting_1510490(70143184, +), CAediting_1510491(70143196, +), CAediting_1510492(70143268, +), CAediting_1510493(70143296, +), CAediting_1510494(70143308, +), CAediting_1510495(70143959, +), CAediting_1510496(70143963, +), CAediting_1510497(70143968, +), CAediting_1510498(70143978, +), CAediting_1510499(70143986, +), CAediting_1510500(70143987, +), CAediting_1510501(70144002, +), CAediting_1510502(70144009, +), CAediting_1510503(70144010, +), CAediting_1510504(70144023, +), CAediting_1510505(70144026, +), CAediting_1510506(70144103, +), CAediting_1510507(70144113, +), CAediting_1510508(70144129, +), CAediting_1510509(70144139, +), CAediting_1510510(70144140, +), CAediting_1510511(70144170, +), CAediting_1510512(70144173, +), CAediting_1510513(70144175, +), CAediting_1510514(70144183, +), CAediting_1510515(70144760, +), CAediting_1510516(70144764, +), CAediting_1510517(70144777, +), CAediting_1510518(70144834, +), CAediting_1510519(70144840, +), CAediting_1510520(70144843, +), CAediting_1510521(70144857, +), CAediting_1510522(70144919, +), CAediting_1510523(70144932, +), CAediting_1510524(70151365, +), CAediting_1510525(70151386, +), CAediting_1510526(70151396, +), CAediting_1510527(70151428, +), CAediting_1510528(70151438, +), CAediting_1510529(70151606, +), CAediting_1510530(70151616, +), CAediting_1510531(70151645, +), CAediting_1510532(70151649, +), CAediting_1510533(70151672, +), CAediting_1510534(70151720, +), CAediting_1510535(70151722, +), CAediting_1510536(70151725, +), CAediting_1510537(70151726, +), CAediting_1510538(70151727, +), CAediting_1510539(70151741, +), CAediting_1510540(70151751, +), CAediting_1510541(70151757, +), CAediting_1510542(70151787, +), CAediting_1510543(70151810, +), CAediting_1510544(70151812, +), CAediting_1510545(70151813, +), CAediting_1510546(70151827, +), CAediting_1510547(70151833, +), CAediting_1510548(70154138, +), CAediting_1510549(70154196, +), CAediting_1510550(70154206, +), CAediting_1510551(70154257, +), CAediting_1510552(70154601, +), CAediting_1510553(70154623, +), CAediting_1510554(70154624, +), CAediting_1510555(70154645, +), CAediting_1510556(70154646, +), CAediting_1510557(70154677, +), CAediting_1510558(70154700, +), CAediting_1510559(70154755, +), CAediting_1510560(70154790, +), CAediting_1510561(70154817, +), CAediting_1510562(70154825, +), CAediting_1510563(70154884, +), CAediting_1510564(70154885, +), CAediting_1510565(70155242, +), CAediting_1510566(70155250, +), CAediting_1510567(70155263, +), CAediting_1510568(70155268, +), CAediting_1510569(70155305, +), CAediting_1510570(70155308, +), CAediting_1510571(70155309, +), CAediting_1510572(70155375, +), CAediting_1510573(70155384, +), CAediting_1510574(70156895, +), CAediting_1510575(70162772, +), CAediting_1510576(70163293, +), CAediting_1510577(70163294, +), CAediting_1510578(70163297, +), CAediting_1510579(70163311, +), CAediting_1510580(70163320, +), CAediting_1510581(70163321, +), CAediting_1510582(70166224, +),

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RNA editing positional annotations for IGBP1 using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_1510356	chrX_70136740_+	intronic
CAediting_1510357	chrX_70136789_+	intronic
CAediting_1510358	chrX_70136790_+	intronic
CAediting_1510359	chrX_70136810_+	intronic
CAediting_1510360	chrX_70136813_+	intronic
CAediting_1510361	chrX_70136824_+	intronic
CAediting_1510362	chrX_70136836_+	intronic
CAediting_1510363	chrX_70136846_+	intronic
CAediting_1510364	chrX_70136848_+	intronic
CAediting_1510365	chrX_70136872_+	intronic
CAediting_1510366	chrX_70136887_+	intronic
CAediting_1510367	chrX_70136890_+	intronic
CAediting_1510368	chrX_70136916_+	intronic
CAediting_1510369	chrX_70136928_+	intronic
CAediting_1510370	chrX_70136929_+	intronic
CAediting_1510371	chrX_70136941_+	intronic
CAediting_1510372	chrX_70136954_+	intronic
CAediting_1510373	chrX_70136967_+	intronic
CAediting_1510374	chrX_70136969_+	intronic
CAediting_1510375	chrX_70137855_+	intronic
CAediting_1510376	chrX_70137877_+	intronic
CAediting_1510377	chrX_70137878_+	intronic
CAediting_1510378	chrX_70137883_+	intronic
CAediting_1510379	chrX_70137884_+	intronic
CAediting_1510380	chrX_70137926_+	intronic
CAediting_1510381	chrX_70137931_+	intronic
CAediting_1510382	chrX_70137932_+	intronic
CAediting_1510383	chrX_70137937_+	intronic
CAediting_1510384	chrX_70137947_+	intronic
CAediting_1510385	chrX_70137957_+	intronic
CAediting_1510386	chrX_70137985_+	intronic
CAediting_1510387	chrX_70138015_+	intronic
CAediting_1510388	chrX_70138016_+	intronic
CAediting_1510389	chrX_70138021_+	intronic
CAediting_1510390	chrX_70138032_+	intronic
CAediting_1510391	chrX_70138048_+	intronic
CAediting_1510392	chrX_70138056_+	intronic
CAediting_1510393	chrX_70138064_+	intronic
CAediting_1510394	chrX_70138077_+	intronic
CAediting_1510395	chrX_70138081_+	intronic
CAediting_1510396	chrX_70138106_+	intronic
CAediting_1510397	chrX_70138217_+	intronic
CAediting_1510398	chrX_70138225_+	intronic
CAediting_1510399	chrX_70138231_+	intronic
CAediting_1510400	chrX_70138247_+	intronic
CAediting_1510401	chrX_70138248_+	intronic
CAediting_1510402	chrX_70138261_+	intronic
CAediting_1510403	chrX_70138274_+	intronic
CAediting_1510404	chrX_70138279_+	intronic
CAediting_1510405	chrX_70138280_+	intronic
CAediting_1510406	chrX_70138282_+	intronic
CAediting_1510407	chrX_70138285_+	intronic
CAediting_1510408	chrX_70138290_+	intronic
CAediting_1510409	chrX_70138295_+	intronic
CAediting_1510410	chrX_70138298_+	intronic
CAediting_1510411	chrX_70138319_+	intronic
CAediting_1510412	chrX_70138332_+	intronic
CAediting_1510413	chrX_70138337_+	intronic
CAediting_1510414	chrX_70138340_+	intronic
CAediting_1510415	chrX_70138344_+	intronic
CAediting_1510416	chrX_70138366_+	intronic
CAediting_1510417	chrX_70138426_+	intronic
CAediting_1510418	chrX_70138441_+	intronic
CAediting_1510419	chrX_70138456_+	intronic
CAediting_1510420	chrX_70139090_+	intronic
CAediting_1510421	chrX_70139095_+	intronic
CAediting_1510422	chrX_70139100_+	intronic
CAediting_1510423	chrX_70139103_+	intronic
CAediting_1510424	chrX_70139114_+	intronic
CAediting_1510425	chrX_70139123_+	intronic
CAediting_1510426	chrX_70139124_+	intronic
CAediting_1510427	chrX_70139134_+	intronic
CAediting_1510428	chrX_70139152_+	intronic
CAediting_1510429	chrX_70139159_+	intronic
CAediting_1510430	chrX_70139163_+	intronic
CAediting_1510431	chrX_70139167_+	intronic
CAediting_1510432	chrX_70139171_+	intronic
CAediting_1510433	chrX_70139189_+	intronic
CAediting_1510434	chrX_70139190_+	intronic
CAediting_1510435	chrX_70139222_+	intronic
CAediting_1510436	chrX_70139235_+	intronic
CAediting_1510437	chrX_70139238_+	intronic
CAediting_1510438	chrX_70139251_+	intronic
CAediting_1510439	chrX_70139255_+	intronic
CAediting_1510440	chrX_70139260_+	intronic
CAediting_1510441	chrX_70139262_+	intronic
CAediting_1510442	chrX_70139267_+	intronic
CAediting_1510443	chrX_70141084_+	intronic
CAediting_1510444	chrX_70141090_+	intronic
CAediting_1510445	chrX_70141121_+	intronic
CAediting_1510446	chrX_70141126_+	intronic
CAediting_1510447	chrX_70141128_+	intronic
CAediting_1510448	chrX_70141129_+	intronic
CAediting_1510449	chrX_70141134_+	intronic
CAediting_1510450	chrX_70141143_+	intronic
CAediting_1510451	chrX_70141158_+	intronic
CAediting_1510452	chrX_70141168_+	intronic
CAediting_1510453	chrX_70141188_+	intronic
CAediting_1510454	chrX_70141191_+	intronic
CAediting_1510455	chrX_70141220_+	intronic
CAediting_1510456	chrX_70141227_+	intronic
CAediting_1510457	chrX_70141236_+	intronic
CAediting_1510458	chrX_70141296_+	intronic
CAediting_1510459	chrX_70141299_+	intronic
CAediting_1510460	chrX_70141334_+	intronic
CAediting_1510461	chrX_70141335_+	intronic
CAediting_1510462	chrX_70142078_+	intronic
CAediting_1510463	chrX_70142099_+	intronic
CAediting_1510464	chrX_70142100_+	intronic
CAediting_1510465	chrX_70142108_+	intronic
CAediting_1510466	chrX_70142137_+	intronic
CAediting_1510467	chrX_70142177_+	intronic
CAediting_1510468	chrX_70142186_+	intronic
CAediting_1510469	chrX_70142220_+	intronic
CAediting_1510470	chrX_70142227_+	intronic
CAediting_1510471	chrX_70142233_+	intronic
CAediting_1510472	chrX_70142251_+	intronic
CAediting_1510473	chrX_70142286_+	intronic
CAediting_1510474	chrX_70142563_+	intronic
CAediting_1510475	chrX_70142564_+	intronic
CAediting_1510476	chrX_70142590_+	intronic
CAediting_1510477	chrX_70142616_+	intronic
CAediting_1510478	chrX_70142632_+	intronic
CAediting_1510479	chrX_70142668_+	intronic
CAediting_1510480	chrX_70142669_+	intronic
CAediting_1510481	chrX_70142672_+	intronic
CAediting_1510482	chrX_70142698_+	intronic
CAediting_1510483	chrX_70142704_+	intronic
CAediting_1510484	chrX_70142721_+	intronic
CAediting_1510485	chrX_70142774_+	intronic
CAediting_1510486	chrX_70142776_+	intronic
CAediting_1510487	chrX_70143052_+	intronic
CAediting_1510488	chrX_70143062_+	intronic
CAediting_1510489	chrX_70143121_+	intronic
CAediting_1510490	chrX_70143184_+	intronic
CAediting_1510491	chrX_70143196_+	intronic
CAediting_1510492	chrX_70143268_+	intronic
CAediting_1510493	chrX_70143296_+	intronic
CAediting_1510494	chrX_70143308_+	intronic
CAediting_1510495	chrX_70143959_+	intronic
CAediting_1510496	chrX_70143963_+	intronic
CAediting_1510497	chrX_70143968_+	intronic
CAediting_1510498	chrX_70143978_+	intronic
CAediting_1510499	chrX_70143986_+	intronic
CAediting_1510500	chrX_70143987_+	intronic
CAediting_1510501	chrX_70144002_+	intronic
CAediting_1510502	chrX_70144009_+	intronic
CAediting_1510503	chrX_70144010_+	intronic
CAediting_1510504	chrX_70144023_+	intronic
CAediting_1510505	chrX_70144026_+	intronic
CAediting_1510506	chrX_70144103_+	intronic
CAediting_1510507	chrX_70144113_+	intronic
CAediting_1510508	chrX_70144129_+	intronic
CAediting_1510509	chrX_70144139_+	intronic
CAediting_1510510	chrX_70144140_+	intronic
CAediting_1510511	chrX_70144170_+	intronic
CAediting_1510512	chrX_70144173_+	intronic
CAediting_1510513	chrX_70144175_+	intronic
CAediting_1510514	chrX_70144183_+	intronic
CAediting_1510515	chrX_70144760_+	intronic
CAediting_1510516	chrX_70144764_+	intronic
CAediting_1510517	chrX_70144777_+	intronic
CAediting_1510518	chrX_70144834_+	intronic
CAediting_1510519	chrX_70144840_+	intronic
CAediting_1510520	chrX_70144843_+	intronic
CAediting_1510521	chrX_70144857_+	intronic
CAediting_1510522	chrX_70144919_+	intronic
CAediting_1510523	chrX_70144932_+	intronic
CAediting_1510524	chrX_70151365_+	intronic
CAediting_1510525	chrX_70151386_+	intronic
CAediting_1510526	chrX_70151396_+	intronic
CAediting_1510527	chrX_70151428_+	intronic
CAediting_1510528	chrX_70151438_+	intronic
CAediting_1510529	chrX_70151606_+	intronic
CAediting_1510530	chrX_70151616_+	intronic
CAediting_1510531	chrX_70151645_+	intronic
CAediting_1510532	chrX_70151649_+	intronic
CAediting_1510533	chrX_70151672_+	intronic
CAediting_1510534	chrX_70151720_+	intronic
CAediting_1510535	chrX_70151722_+	intronic
CAediting_1510536	chrX_70151725_+	intronic
CAediting_1510537	chrX_70151726_+	intronic
CAediting_1510538	chrX_70151727_+	intronic
CAediting_1510539	chrX_70151741_+	intronic
CAediting_1510540	chrX_70151751_+	intronic
CAediting_1510541	chrX_70151757_+	intronic
CAediting_1510542	chrX_70151787_+	intronic
CAediting_1510543	chrX_70151810_+	intronic
CAediting_1510544	chrX_70151812_+	intronic
CAediting_1510545	chrX_70151813_+	intronic
CAediting_1510546	chrX_70151827_+	intronic
CAediting_1510547	chrX_70151833_+	intronic
CAediting_1510548	chrX_70154138_+	intronic
CAediting_1510549	chrX_70154196_+	intronic
CAediting_1510550	chrX_70154206_+	intronic
CAediting_1510551	chrX_70154257_+	intronic
CAediting_1510552	chrX_70154601_+	intronic
CAediting_1510553	chrX_70154623_+	intronic
CAediting_1510554	chrX_70154624_+	intronic
CAediting_1510555	chrX_70154645_+	intronic
CAediting_1510556	chrX_70154646_+	intronic
CAediting_1510557	chrX_70154677_+	intronic
CAediting_1510558	chrX_70154700_+	intronic
CAediting_1510559	chrX_70154755_+	intronic
CAediting_1510560	chrX_70154790_+	intronic
CAediting_1510561	chrX_70154817_+	intronic
CAediting_1510562	chrX_70154825_+	intronic
CAediting_1510563	chrX_70154884_+	intronic
CAediting_1510564	chrX_70154885_+	intronic
CAediting_1510565	chrX_70155242_+	intronic
CAediting_1510566	chrX_70155250_+	intronic
CAediting_1510567	chrX_70155263_+	intronic
CAediting_1510568	chrX_70155268_+	intronic
CAediting_1510569	chrX_70155305_+	intronic
CAediting_1510570	chrX_70155308_+	intronic
CAediting_1510571	chrX_70155309_+	intronic
CAediting_1510572	chrX_70155375_+	intronic
CAediting_1510573	chrX_70155384_+	intronic
CAediting_1510574	chrX_70156895_+	intronic
CAediting_1510575	chrX_70162772_+	intronic
CAediting_1510576	chrX_70163293_+	intronic
CAediting_1510577	chrX_70163294_+	intronic
CAediting_1510578	chrX_70163297_+	intronic
CAediting_1510579	chrX_70163311_+	intronic
CAediting_1510580	chrX_70163320_+	intronic
CAediting_1510581	chrX_70163321_+	intronic
CAediting_1510582	chrX_70166224_+	UTR3

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_1510356	chrX_70136740_+	SINE	Alu	AluSq2
CAediting_1510357	chrX_70136789_+	SINE	Alu	AluSq2
CAediting_1510358	chrX_70136790_+	SINE	Alu	AluSq2
CAediting_1510359	chrX_70136810_+	SINE	Alu	AluSq2
CAediting_1510360	chrX_70136813_+	SINE	Alu	AluSq2
CAediting_1510361	chrX_70136824_+	SINE	Alu	AluSq2
CAediting_1510362	chrX_70136836_+	SINE	Alu	AluSq2
CAediting_1510363	chrX_70136846_+	SINE	Alu	AluSq2
CAediting_1510364	chrX_70136848_+	SINE	Alu	AluSq2
CAediting_1510365	chrX_70136872_+	SINE	Alu	AluSq2
CAediting_1510366	chrX_70136887_+	SINE	Alu	AluSq2
CAediting_1510367	chrX_70136890_+	SINE	Alu	AluSq2
CAediting_1510368	chrX_70136916_+	SINE	Alu	AluSq2
CAediting_1510369	chrX_70136928_+	SINE	Alu	AluSq2
CAediting_1510370	chrX_70136929_+	SINE	Alu	AluSq2
CAediting_1510371	chrX_70136941_+	SINE	Alu	AluSq2
CAediting_1510372	chrX_70136954_+	SINE	Alu	AluSq2
CAediting_1510373	chrX_70136967_+	SINE	Alu	AluSq2
CAediting_1510374	chrX_70136969_+	SINE	Alu	AluSq2
CAediting_1510375	chrX_70137855_+	SINE	Alu	AluSz6
CAediting_1510376	chrX_70137877_+	SINE	Alu	AluSz6
CAediting_1510377	chrX_70137878_+	SINE	Alu	AluSz6
CAediting_1510378	chrX_70137883_+	SINE	Alu	AluSz6
CAediting_1510379	chrX_70137884_+	SINE	Alu	AluSz6
CAediting_1510380	chrX_70137926_+	SINE	Alu	AluSz6
CAediting_1510381	chrX_70137931_+	SINE	Alu	AluSz6
CAediting_1510382	chrX_70137932_+	SINE	Alu	AluSz6
CAediting_1510383	chrX_70137937_+	SINE	Alu	AluSz6
CAediting_1510384	chrX_70137947_+	SINE	Alu	AluSz6
CAediting_1510385	chrX_70137957_+	SINE	Alu	AluSz6
CAediting_1510386	chrX_70137985_+	SINE	Alu	AluSz6
CAediting_1510387	chrX_70138015_+	SINE	Alu	AluSz6
CAediting_1510388	chrX_70138016_+	SINE	Alu	AluSz6
CAediting_1510389	chrX_70138021_+	SINE	Alu	AluSz6
CAediting_1510390	chrX_70138032_+	SINE	Alu	AluSz6
CAediting_1510391	chrX_70138048_+	SINE	Alu	AluSz6
CAediting_1510392	chrX_70138056_+	SINE	Alu	AluSz6
CAediting_1510393	chrX_70138064_+	SINE	Alu	AluSz6
CAediting_1510394	chrX_70138077_+	SINE	Alu	AluSz6
CAediting_1510395	chrX_70138081_+	SINE	Alu	AluSz6
CAediting_1510396	chrX_70138106_+	SINE	Alu	AluSz6
CAediting_1510397	chrX_70138217_+	SINE	Alu	AluJo
CAediting_1510398	chrX_70138225_+	SINE	Alu	AluJo
CAediting_1510399	chrX_70138231_+	SINE	Alu	AluJo
CAediting_1510400	chrX_70138247_+	SINE	Alu	AluJo
CAediting_1510401	chrX_70138248_+	SINE	Alu	AluJo
CAediting_1510402	chrX_70138261_+	SINE	Alu	AluJo
CAediting_1510403	chrX_70138274_+	SINE	Alu	AluJo
CAediting_1510404	chrX_70138279_+	SINE	Alu	AluJo
CAediting_1510405	chrX_70138280_+	SINE	Alu	AluJo
CAediting_1510406	chrX_70138282_+	SINE	Alu	AluJo
CAediting_1510407	chrX_70138285_+	SINE	Alu	AluJo
CAediting_1510408	chrX_70138290_+	SINE	Alu	AluJo
CAediting_1510409	chrX_70138295_+	SINE	Alu	AluJo
CAediting_1510410	chrX_70138298_+	SINE	Alu	AluJo
CAediting_1510411	chrX_70138319_+	SINE	Alu	AluJo
CAediting_1510412	chrX_70138332_+	SINE	Alu	AluJo
CAediting_1510413	chrX_70138337_+	SINE	Alu	AluJo
CAediting_1510414	chrX_70138340_+	SINE	Alu	AluJo
CAediting_1510415	chrX_70138344_+	SINE	Alu	AluJo
CAediting_1510416	chrX_70138366_+	SINE	Alu	AluJo
CAediting_1510417	chrX_70138426_+	SINE	Alu	AluJo
CAediting_1510418	chrX_70138441_+	SINE	Alu	AluJo
CAediting_1510419	chrX_70138456_+	SINE	Alu	AluJo
CAediting_1510420	chrX_70139090_+	SINE	Alu	AluSq2
CAediting_1510421	chrX_70139095_+	SINE	Alu	AluSq2
CAediting_1510422	chrX_70139100_+	SINE	Alu	AluSq2
CAediting_1510423	chrX_70139103_+	SINE	Alu	AluSq2
CAediting_1510424	chrX_70139114_+	SINE	Alu	AluSq2
CAediting_1510425	chrX_70139123_+	SINE	Alu	AluSq2
CAediting_1510426	chrX_70139124_+	SINE	Alu	AluSq2
CAediting_1510427	chrX_70139134_+	SINE	Alu	AluSq2
CAediting_1510428	chrX_70139152_+	SINE	Alu	AluSq2
CAediting_1510429	chrX_70139159_+	SINE	Alu	AluSq2
CAediting_1510430	chrX_70139163_+	SINE	Alu	AluSq2
CAediting_1510431	chrX_70139167_+	SINE	Alu	AluSq2
CAediting_1510432	chrX_70139171_+	SINE	Alu	AluSq2
CAediting_1510433	chrX_70139189_+	SINE	Alu	AluSq2
CAediting_1510434	chrX_70139190_+	SINE	Alu	AluSq2
CAediting_1510435	chrX_70139222_+	SINE	Alu	AluSq2
CAediting_1510436	chrX_70139235_+	SINE	Alu	AluSq2
CAediting_1510437	chrX_70139238_+	SINE	Alu	AluSq2
CAediting_1510438	chrX_70139251_+	SINE	Alu	AluSq2
CAediting_1510439	chrX_70139255_+	SINE	Alu	AluSq2
CAediting_1510440	chrX_70139260_+	SINE	Alu	AluSq2
CAediting_1510441	chrX_70139262_+	SINE	Alu	AluSq2
CAediting_1510442	chrX_70139267_+	SINE	Alu	AluSq2
CAediting_1510443	chrX_70141084_+	SINE	Alu	AluSg4
CAediting_1510444	chrX_70141090_+	SINE	Alu	AluSg4
CAediting_1510445	chrX_70141121_+	SINE	Alu	AluSg4
CAediting_1510446	chrX_70141126_+	SINE	Alu	AluSg4
CAediting_1510447	chrX_70141128_+	SINE	Alu	AluSg4
CAediting_1510448	chrX_70141129_+	SINE	Alu	AluSg4
CAediting_1510449	chrX_70141134_+	SINE	Alu	AluSg4
CAediting_1510450	chrX_70141143_+	SINE	Alu	AluSg4
CAediting_1510451	chrX_70141158_+	SINE	Alu	AluSg4
CAediting_1510452	chrX_70141168_+	SINE	Alu	AluSg4
CAediting_1510453	chrX_70141188_+	SINE	Alu	AluSg4
CAediting_1510454	chrX_70141191_+	SINE	Alu	AluSg4
CAediting_1510455	chrX_70141220_+	SINE	Alu	AluSg4
CAediting_1510456	chrX_70141227_+	SINE	Alu	AluSg4
CAediting_1510457	chrX_70141236_+	SINE	Alu	AluSg4
CAediting_1510458	chrX_70141296_+	SINE	Alu	AluSg4
CAediting_1510459	chrX_70141299_+	SINE	Alu	AluSg4
CAediting_1510460	chrX_70141334_+	SINE	Alu	AluSg4
CAediting_1510461	chrX_70141335_+	SINE	Alu	AluSg4
CAediting_1510462	chrX_70142078_+	SINE	Alu	AluJb
CAediting_1510463	chrX_70142099_+	SINE	Alu	AluJb
CAediting_1510464	chrX_70142100_+	SINE	Alu	AluJb
CAediting_1510465	chrX_70142108_+	SINE	Alu	AluJb
CAediting_1510466	chrX_70142137_+	SINE	Alu	AluJb
CAediting_1510467	chrX_70142177_+	SINE	Alu	AluJb
CAediting_1510468	chrX_70142186_+	SINE	Alu	AluJb
CAediting_1510469	chrX_70142220_+	SINE	Alu	AluJb
CAediting_1510470	chrX_70142227_+	SINE	Alu	AluJb
CAediting_1510471	chrX_70142233_+	SINE	Alu	AluJb
CAediting_1510472	chrX_70142251_+	SINE	Alu	AluJb
CAediting_1510473	chrX_70142286_+	SINE	Alu	AluJb
CAediting_1510474	chrX_70142563_+	SINE	Alu	AluJr4
CAediting_1510475	chrX_70142564_+	SINE	Alu	AluJr4
CAediting_1510476	chrX_70142590_+	SINE	Alu	AluJr4
CAediting_1510477	chrX_70142616_+	SINE	Alu	AluJr4
CAediting_1510478	chrX_70142632_+	SINE	Alu	AluJr4
CAediting_1510479	chrX_70142668_+	SINE	Alu	AluJr4
CAediting_1510480	chrX_70142669_+	SINE	Alu	AluJr4
CAediting_1510481	chrX_70142672_+	SINE	Alu	AluJr4
CAediting_1510482	chrX_70142698_+	SINE	Alu	AluJr4
CAediting_1510483	chrX_70142704_+	SINE	Alu	AluJr4
CAediting_1510484	chrX_70142721_+	SINE	Alu	AluJr4
CAediting_1510485	chrX_70142774_+	SINE	Alu	AluJr4
CAediting_1510486	chrX_70142776_+	SINE	Alu	AluJr4
CAediting_1510487	chrX_70143052_+	SINE	Alu	AluY
CAediting_1510488	chrX_70143062_+	SINE	Alu	AluY
CAediting_1510489	chrX_70143121_+	SINE	Alu	AluY
CAediting_1510490	chrX_70143184_+	SINE	Alu	AluY
CAediting_1510491	chrX_70143196_+	SINE	Alu	AluY
CAediting_1510492	chrX_70143268_+	SINE	Alu	AluSp
CAediting_1510493	chrX_70143296_+	SINE	Alu	AluSp
CAediting_1510494	chrX_70143308_+	SINE	Alu	AluSp
CAediting_1510495	chrX_70143959_+	SINE	Alu	AluSx
CAediting_1510496	chrX_70143963_+	SINE	Alu	AluSx
CAediting_1510497	chrX_70143968_+	SINE	Alu	AluSx
CAediting_1510498	chrX_70143978_+	SINE	Alu	AluSx
CAediting_1510499	chrX_70143986_+	SINE	Alu	AluSx
CAediting_1510500	chrX_70143987_+	SINE	Alu	AluSx
CAediting_1510501	chrX_70144002_+	SINE	Alu	AluSx
CAediting_1510502	chrX_70144009_+	SINE	Alu	AluSx
CAediting_1510503	chrX_70144010_+	SINE	Alu	AluSx
CAediting_1510504	chrX_70144023_+	SINE	Alu	AluSx
CAediting_1510505	chrX_70144026_+	SINE	Alu	AluSx
CAediting_1510506	chrX_70144103_+	SINE	Alu	AluSx
CAediting_1510507	chrX_70144113_+	SINE	Alu	AluSx
CAediting_1510508	chrX_70144129_+	SINE	Alu	AluSx
CAediting_1510509	chrX_70144139_+	SINE	Alu	AluSx
CAediting_1510510	chrX_70144140_+	SINE	Alu	AluSx
CAediting_1510511	chrX_70144170_+	SINE	Alu	AluSx
CAediting_1510512	chrX_70144173_+	SINE	Alu	AluSx
CAediting_1510513	chrX_70144175_+	SINE	Alu	AluSx
CAediting_1510514	chrX_70144183_+	SINE	Alu	AluSx
CAediting_1510515	chrX_70144760_+	SINE	Alu	AluSc5
CAediting_1510516	chrX_70144764_+	SINE	Alu	AluSc5
CAediting_1510517	chrX_70144777_+	SINE	Alu	AluSc5
CAediting_1510518	chrX_70144834_+	SINE	Alu	AluSc5
CAediting_1510519	chrX_70144840_+	SINE	Alu	AluSc5
CAediting_1510520	chrX_70144843_+	SINE	Alu	AluSc5
CAediting_1510521	chrX_70144857_+	SINE	Alu	AluSc5
CAediting_1510522	chrX_70144919_+	SINE	Alu	AluSc5
CAediting_1510523	chrX_70144932_+	SINE	Alu	AluSc5
CAediting_1510524	chrX_70151365_+	SINE	Alu	AluJo
CAediting_1510525	chrX_70151386_+	SINE	Alu	AluJo
CAediting_1510526	chrX_70151396_+	SINE	Alu	AluJo
CAediting_1510527	chrX_70151428_+	SINE	Alu	AluJo
CAediting_1510528	chrX_70151438_+	SINE	Alu	AluJo
CAediting_1510529	chrX_70151606_+	SINE	Alu	AluJb
CAediting_1510530	chrX_70151616_+	SINE	Alu	AluJb
CAediting_1510531	chrX_70151645_+	SINE	Alu	AluJb
CAediting_1510532	chrX_70151649_+	SINE	Alu	AluJb
CAediting_1510533	chrX_70151672_+	SINE	Alu	AluJb
CAediting_1510534	chrX_70151720_+	SINE	Alu	AluJb
CAediting_1510535	chrX_70151722_+	SINE	Alu	AluJb
CAediting_1510536	chrX_70151725_+	SINE	Alu	AluJb
CAediting_1510537	chrX_70151726_+	SINE	Alu	AluJb
CAediting_1510538	chrX_70151727_+	SINE	Alu	AluJb
CAediting_1510539	chrX_70151741_+	SINE	Alu	AluJb
CAediting_1510540	chrX_70151751_+	SINE	Alu	AluJb
CAediting_1510541	chrX_70151757_+	SINE	Alu	AluJb
CAediting_1510542	chrX_70151787_+	SINE	Alu	AluJb
CAediting_1510543	chrX_70151810_+	SINE	Alu	AluJb
CAediting_1510544	chrX_70151812_+	SINE	Alu	AluJb
CAediting_1510545	chrX_70151813_+	SINE	Alu	AluJb
CAediting_1510546	chrX_70151827_+	SINE	Alu	AluJb
CAediting_1510547	chrX_70151833_+	SINE	Alu	AluJb
CAediting_1510548	chrX_70154138_+	SINE	Alu	AluY
CAediting_1510549	chrX_70154196_+	SINE	Alu	AluY
CAediting_1510550	chrX_70154206_+	SINE	Alu	AluY
CAediting_1510551	chrX_70154257_+	SINE	Alu	AluY
CAediting_1510552	chrX_70154601_+	SINE	Alu	AluJb
CAediting_1510553	chrX_70154623_+	SINE	Alu	AluJb
CAediting_1510554	chrX_70154624_+	SINE	Alu	AluJb
CAediting_1510555	chrX_70154645_+	SINE	Alu	AluJb
CAediting_1510556	chrX_70154646_+	SINE	Alu	AluJb
CAediting_1510557	chrX_70154677_+	SINE	Alu	AluJb
CAediting_1510558	chrX_70154700_+	SINE	Alu	AluJb
CAediting_1510559	chrX_70154755_+	SINE	Alu	AluJb
CAediting_1510560	chrX_70154790_+	SINE	Alu	AluJb
CAediting_1510561	chrX_70154817_+	SINE	Alu	AluJb
CAediting_1510562	chrX_70154825_+	SINE	Alu	AluJb
CAediting_1510563	chrX_70154884_+	SINE	Alu	AluJb
CAediting_1510564	chrX_70154885_+	SINE	Alu	AluJb
CAediting_1510565	chrX_70155242_+	SINE	Alu	AluSg
CAediting_1510566	chrX_70155250_+	SINE	Alu	AluSg
CAediting_1510567	chrX_70155263_+	SINE	Alu	AluSg
CAediting_1510568	chrX_70155268_+	SINE	Alu	AluSg
CAediting_1510569	chrX_70155305_+	SINE	Alu	AluSg
CAediting_1510570	chrX_70155308_+	SINE	Alu	AluSg
CAediting_1510571	chrX_70155309_+	SINE	Alu	AluSg
CAediting_1510572	chrX_70155375_+	SINE	Alu	AluSg
CAediting_1510573	chrX_70155384_+	SINE	Alu	AluSg
CAediting_1510574	chrX_70156895_+	SINE	Alu	AluSx1
CAediting_1510575	chrX_70162772_+	SINE	Alu	AluSz
CAediting_1510576	chrX_70163293_+	SINE	Alu	FLAM_C
CAediting_1510577	chrX_70163294_+	SINE	Alu	FLAM_C
CAediting_1510578	chrX_70163297_+	SINE	Alu	FLAM_C
CAediting_1510579	chrX_70163311_+	SINE	Alu	FLAM_C
CAediting_1510580	chrX_70163320_+	SINE	Alu	FLAM_C
CAediting_1510581	chrX_70163321_+	SINE	Alu	FLAM_C

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RNA A-to-I editing events in the alternative splicing sites for IGBP1

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000089289.14.IGBP1.

Correlation between RNA A-to-I editing and PSI for ENSG00000089289.14.IGBP1.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for IGBP1

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for IGBP1

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for IGBP1

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1510582	chrX_70166224_+	ENSG00000089289.14	ENST00000356413	hsa-miR-4446-5p	70166222	70166229	8mer-1a	70166209	70166229	152.00	-16.81
CAediting_1510582	chrX_70166224_+	ENSG00000089289.14	ENST00000342206	hsa-miR-4446-5p	70166222	70166229	8mer-1a	70166209	70166229	152.00	-16.81

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1368054	chr19_46709310_-	ENSG00000089289.14	ENST00000356413	hsa-miR-320e	70166206	70166212	7mer-m8	70166196	70166213	147	-12.05
CAediting_1368054	chr19_46709310_-	ENSG00000089289.14	ENST00000342206	hsa-miR-320e	70166206	70166212	7mer-m8	70166196	70166213	147	-12.05

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for IGBP1

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST

ENST type

RNA structure without RNA A-to-I editing.

RNA structure with RNA A-to-I editing.

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID

ENST

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

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Relation with ADAR for IGBP1

Correlation between ADAR gene expression and RNA editing frequency

Cancer

CAeditomID

position

ADAR1 (p-val)

ADAR1 (coeff.)

ADAR2 (p-val)

ADAR2 (coeff.)

ADAR3 (p-val)

ADAR3 (coeff.)

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Relation with cancer stages for IGBP1

Correlation between Cancer stages and RNA editing frequency

Cancer

Stage_type

CAeditomID

position

P-val

Coeff.

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Relation with survival for IGBP1

Correlation between RNA editing and survival

Cancer

CAeditomID

position

KMpvalue

Coxpvalue

CoxHR

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RelatedDrugs for IGBP1

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for IGBP1

Diseases associated with this gene.
(DisGeNet 7.0)

Gene	Disease ID	Disease name	# pubmeds	Source
IGBP1	C0006142	Malignant neoplasm of breast	1	CTD_human
IGBP1	C0007621	Neoplastic Cell Transformation	1	CTD_human
IGBP1	C0024121	Lung Neoplasms	1	CTD_human
IGBP1	C0242379	Malignant neoplasm of lung	1	CTD_human
IGBP1	C0678222	Breast Carcinoma	1	CTD_human
IGBP1	C1257931	Mammary Neoplasms, Human	1	CTD_human
IGBP1	C1458155	Mammary Neoplasms	1	CTD_human
IGBP1	C1845446	Corpus Callosum, Agenesis of, with Mental Retardation, Ocular Coloboma, and Micrognathia	1	CTD_human;GENOMICS_ENGLAND;ORPHANET
IGBP1	C2239176	Liver carcinoma	1	CTD_human
IGBP1	C4704874	Mammary Carcinoma, Human	1	CTD_human

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene