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Editing gene: ZNF677 (CAeditome ID:342926)

Gene summary for ZNF677

Gene summary

Gene information	Gene symbol	ZNF677
	Gene ID	342926
	Gene name	zinc finger protein 677
	Synonyms	-
	Cytomap	19q13.42
	Type of gene	protein-coding
	Description	zinc finger protein 677hypothetical protein MGC48625
	Modification date	20210522
	UniProtAcc	Q86XU0
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene

GO ID

GO term

PubMed ID

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RNA A-to-I events for ZNF677

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000197928.9

RNA A-to-I editing events in Cancer.

CAediting_1386450(53235997, -), CAediting_1386451(53236017, -), CAediting_1386452(53236026, -), CAediting_1386453(53236082, -), CAediting_1386454(53236121, -), CAediting_1386455(53240280, -), CAediting_1386456(53240285, -), CAediting_1386457(53240314, -), CAediting_1386458(53240322, -), CAediting_1386459(53240332, -), CAediting_1386460(53240336, -), CAediting_1386461(53240358, -), CAediting_1386462(53240371, -), CAediting_1386463(53240375, -), CAediting_1386464(53240385, -), CAediting_1386465(53240411, -), CAediting_1386466(53240430, -), CAediting_1386467(53240451, -), CAediting_1386468(53240467, -), CAediting_1386469(53241927, -), CAediting_1386470(53241958, -), CAediting_1386471(53241966, -), CAediting_1386472(53241994, -), CAediting_1386473(53242015, -), CAediting_1386474(53242017, -), CAediting_1386475(53242021, -), CAediting_1386476(53242028, -), CAediting_1386477(53242043, -), CAediting_1386478(53242053, -), CAediting_1386479(53242067, -), CAediting_1386480(53242069, -), CAediting_1386481(53242070, -), CAediting_1386482(53242078, -), CAediting_1386483(53242128, -), CAediting_1386484(53242204, -), CAediting_1386485(53242213, -), CAediting_1386486(53243813, -), CAediting_1386487(53243856, -),

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RNA editing positional annotations for ZNF677 using Annovar

Protein coding RNA editing(s).

CAeditome ID	Position	Variant type	ENST	NTchange	AAchange	SIFT_score	Polyphen2_HVAR_score	PROVEAN_pred
CAediting_1386486	chr19_53243813_-	nonsynonymous SNV	ENST00000333952.7	c.A100G	p.R34G	D	P	D
CAediting_1386486	chr19_53243813_-	nonsynonymous SNV	ENST00000594517.4	c.A100G	p.R34G	D	P	D
CAediting_1386486	chr19_53243813_-	nonsynonymous SNV	ENST00000594681.4	c.A100G	p.R34G	D	P	D
CAediting_1386486	chr19_53243813_-	nonsynonymous SNV	ENST00000598513.4	c.A100G	p.R34G	D	P	D
CAediting_1386486	chr19_53243813_-	nonsynonymous SNV	ENST00000598806.4	c.A100G	p.R34G	D	P	D
CAediting_1386486	chr19_53243813_-	nonsynonymous SNV	ENST00000599012.4	c.A100G	p.R34G	D	P	D
CAediting_1386486	chr19_53243813_-	nonsynonymous SNV	ENST00000601413.4	c.A100G	p.R34G	D	P	D
CAediting_1386486	chr19_53243813_-	nonsynonymous SNV	ENST00000601828.4	c.A100G	p.R34G	D	P	D

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_1386450	chr19_53235997_-	UTR3
CAediting_1386451	chr19_53236017_-	UTR3
CAediting_1386452	chr19_53236026_-	UTR3
CAediting_1386453	chr19_53236082_-	UTR3
CAediting_1386454	chr19_53236121_-	UTR3
CAediting_1386455	chr19_53240280_-	ncRNA_exonic
CAediting_1386456	chr19_53240285_-	ncRNA_exonic
CAediting_1386457	chr19_53240314_-	ncRNA_exonic
CAediting_1386458	chr19_53240322_-	ncRNA_exonic
CAediting_1386459	chr19_53240332_-	ncRNA_exonic
CAediting_1386460	chr19_53240336_-	ncRNA_exonic
CAediting_1386461	chr19_53240358_-	ncRNA_exonic
CAediting_1386462	chr19_53240371_-	ncRNA_exonic
CAediting_1386463	chr19_53240375_-	ncRNA_exonic
CAediting_1386464	chr19_53240385_-	ncRNA_exonic
CAediting_1386465	chr19_53240411_-	ncRNA_exonic
CAediting_1386466	chr19_53240430_-	ncRNA_exonic
CAediting_1386467	chr19_53240451_-	ncRNA_exonic
CAediting_1386468	chr19_53240467_-	ncRNA_exonic
CAediting_1386469	chr19_53241927_-	UTR3
CAediting_1386470	chr19_53241958_-	UTR3
CAediting_1386471	chr19_53241966_-	UTR3
CAediting_1386472	chr19_53241994_-	UTR3
CAediting_1386473	chr19_53242015_-	UTR3
CAediting_1386474	chr19_53242017_-	UTR3
CAediting_1386475	chr19_53242021_-	UTR3
CAediting_1386476	chr19_53242028_-	UTR3
CAediting_1386477	chr19_53242043_-	UTR3
CAediting_1386478	chr19_53242053_-	UTR3
CAediting_1386479	chr19_53242067_-	UTR3
CAediting_1386480	chr19_53242069_-	UTR3
CAediting_1386481	chr19_53242070_-	UTR3
CAediting_1386482	chr19_53242078_-	UTR3
CAediting_1386483	chr19_53242128_-	UTR3
CAediting_1386484	chr19_53242204_-	UTR3
CAediting_1386485	chr19_53242213_-	ncRNA_exonic
CAediting_1386486	chr19_53243813_-	exonic
CAediting_1386487	chr19_53243856_-	exonic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_1386450	chr19_53235997_-	SINE	Alu	AluSx
CAediting_1386451	chr19_53236017_-	SINE	Alu	AluSx
CAediting_1386452	chr19_53236026_-	SINE	Alu	AluSx
CAediting_1386453	chr19_53236082_-	SINE	Alu	AluSx
CAediting_1386454	chr19_53236121_-	SINE	Alu	AluSx
CAediting_1386455	chr19_53240280_-	SINE	Alu	AluY
CAediting_1386456	chr19_53240285_-	SINE	Alu	AluY
CAediting_1386457	chr19_53240314_-	SINE	Alu	AluY
CAediting_1386458	chr19_53240322_-	SINE	Alu	AluY
CAediting_1386459	chr19_53240332_-	SINE	Alu	AluY
CAediting_1386460	chr19_53240336_-	SINE	Alu	AluY
CAediting_1386461	chr19_53240358_-	SINE	Alu	AluY
CAediting_1386462	chr19_53240371_-	SINE	Alu	AluY
CAediting_1386463	chr19_53240375_-	SINE	Alu	AluY
CAediting_1386464	chr19_53240385_-	SINE	Alu	AluY
CAediting_1386465	chr19_53240411_-	SINE	Alu	AluY
CAediting_1386466	chr19_53240430_-	SINE	Alu	AluY
CAediting_1386467	chr19_53240451_-	SINE	Alu	AluY
CAediting_1386468	chr19_53240467_-	SINE	Alu	AluY
CAediting_1386469	chr19_53241927_-	SINE	Alu	AluSp
CAediting_1386470	chr19_53241958_-	SINE	Alu	AluSp
CAediting_1386471	chr19_53241966_-	SINE	Alu	AluSp
CAediting_1386472	chr19_53241994_-	SINE	Alu	AluSp
CAediting_1386473	chr19_53242015_-	SINE	Alu	AluSp
CAediting_1386474	chr19_53242017_-	SINE	Alu	AluSp
CAediting_1386475	chr19_53242021_-	SINE	Alu	AluSp
CAediting_1386476	chr19_53242028_-	SINE	Alu	AluSp
CAediting_1386477	chr19_53242043_-	SINE	Alu	AluSp
CAediting_1386478	chr19_53242053_-	SINE	Alu	AluSp
CAediting_1386479	chr19_53242067_-	SINE	Alu	AluSp
CAediting_1386480	chr19_53242069_-	SINE	Alu	AluSp
CAediting_1386481	chr19_53242070_-	SINE	Alu	AluSp
CAediting_1386482	chr19_53242078_-	SINE	Alu	AluSp
CAediting_1386483	chr19_53242128_-	SINE	Alu	AluSp
CAediting_1386484	chr19_53242204_-	SINE	Alu	AluSp
CAediting_1386485	chr19_53242213_-	SINE	Alu	AluSp

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RNA A-to-I editing events in the alternative splicing sites for ZNF677

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000197928.9.ZNF677.

Correlation between RNA A-to-I editing and PSI for ENSG00000197928.9.ZNF677.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for ZNF677

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for ZNF677

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for ZNF677

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1386450	chr19_53235997_-	ENSG00000197928.9	ENST00000598513	hsa-miR-3940-3p	53235993	53235999	7mer-m8	53235992	53236010	144.00	-24.53
CAediting_1386450	chr19_53235997_-	ENSG00000197928.9	ENST00000333952	hsa-miR-3940-3p	53235993	53235999	7mer-m8	53235992	53236010	144.00	-24.53
CAediting_1386451	chr19_53236017_-	ENSG00000197928.9	ENST00000598513	hsa-miR-340-3p	53236015	53236022	8mer-1a	53236015	53236036	149.00	-18.08
CAediting_1386451	chr19_53236017_-	ENSG00000197928.9	ENST00000598513	hsa-miR-6827-3p	53236015	53236022	8mer-1a	53236015	53236035	153.00	-17.62
CAediting_1386451	chr19_53236017_-	ENSG00000197928.9	ENST00000333952	hsa-miR-340-3p	53236015	53236022	8mer-1a	53236015	53236036	149.00	-18.08
CAediting_1386451	chr19_53236017_-	ENSG00000197928.9	ENST00000333952	hsa-miR-6827-3p	53236015	53236022	8mer-1a	53236015	53236035	153.00	-17.62
CAediting_1386470	chr19_53241958_-	ENSG00000197928.9	ENST00000594681	hsa-miR-1251-3p	53241957	53241963	7mer-m8	53241956	53241976	150.00	-15.86
CAediting_1386470	chr19_53241958_-	ENSG00000197928.9	ENST00000594681	hsa-miR-6874-5p	53241953	53241959	7mer-m8	53241952	53241974	140.00	-14.21
CAediting_1386471	chr19_53241966_-	ENSG00000197928.9	ENST00000594681	hsa-miR-367-5p	53241966	53241972	7mer-m8	53241965	53241986	143.00	-12.08
CAediting_1386471	chr19_53241966_-	ENSG00000197928.9	ENST00000594681	hsa-miR-6772-3p	53241960	53241967	8mer-1a	53241960	53241977	150.00	-24.99
CAediting_1386472	chr19_53241994_-	ENSG00000197928.9	ENST00000594681	hsa-miR-4634	53241989	53241996	8mer-1a	53241989	53242009	150.00	-24.51
CAediting_1386475	chr19_53242021_-	ENSG00000197928.9	ENST00000594681	hsa-miR-1913	53242015	53242022	8mer-1a	53242015	53242035	147.00	-18.33
CAediting_1386475	chr19_53242021_-	ENSG00000197928.9	ENST00000594681	hsa-miR-4749-3p	53242017	53242024	8mer-1a	53242017	53242036	140.00	-15.33
CAediting_1386475	chr19_53242021_-	ENSG00000197928.9	ENST00000594681	hsa-miR-6795-3p	53242019	53242025	7mer-m8	53242018	53242039	143.00	-17.08
CAediting_1386476	chr19_53242028_-	ENSG00000197928.9	ENST00000594681	hsa-miR-3944-3p	53242023	53242029	7mer-m8	53242022	53242044	154.00	-25.22
CAediting_1386476	chr19_53242028_-	ENSG00000197928.9	ENST00000594681	hsa-miR-4437	53242025	53242031	7mer-m8	53242024	53242044	150.00	-20.27
CAediting_1386481	chr19_53242070_-	ENSG00000197928.9	ENST00000594681	hsa-miR-513a-5p	53242069	53242075	7mer-m8	53242068	53242085	156.00	-20.14
CAediting_1386481	chr19_53242070_-	ENSG00000197928.9	ENST00000594681	hsa-miR-513a-5p	53242069	53242075	7mer-m8	53242068	53242085	156.00	-20.14
CAediting_1386484	chr19_53242204_-	ENSG00000197928.9	ENST00000594681	hsa-miR-625-3p	53242203	53242209	7mer-m8	53242202	53242223	140.00	-12.44
CAediting_1386484	chr19_53242204_-	ENSG00000197928.9	ENST00000594681	hsa-miR-8052	53242199	53242205	7mer-1a	53242199	53242217	144.00	-23.02
CAediting_1386484	chr19_53242204_-	ENSG00000197928.9	ENST00000598806	hsa-miR-625-3p	53242203	53242209	7mer-m8	53242202	53242223	140.00	-12.44
CAediting_1386484	chr19_53242204_-	ENSG00000197928.9	ENST00000598806	hsa-miR-8052	53242199	53242205	7mer-1a	53242199	53242217	144.00	-23.02
CAediting_1386485	chr19_53242213_-	ENSG00000197928.9	ENST00000594681	hsa-miR-4634	53242209	53242215	7mer-m8	53242208	53242224	144.00	-22.57
CAediting_1386485	chr19_53242213_-	ENSG00000197928.9	ENST00000598806	hsa-miR-4634	53242209	53242215	7mer-m8	53242208	53242224	144.00	-22.57
CAediting_1386473	chr19_53242015_-	ENSG00000197928.9	ENST00000594681	hsa-miR-6747-3p	53242015	53242021	7mer-m8	53242014	53242035	144.00	-18.27
CAediting_1386473	chr19_53242015_-	ENSG00000197928.9	ENST00000594681	hsa-miR-6752-3p	53242014	53242020	7mer-m8	53242013	53242033	142.00	-18.28
CAediting_1386473	chr19_53242015_-	ENSG00000197928.9	ENST00000594681	hsa-miR-6801-3p	53242013	53242019	7mer-m8	53242012	53242031	157.00	-26.36
CAediting_1386473	chr19_53242015_-	ENSG00000197928.9	ENST00000594681	hsa-miR-6810-3p	53242013	53242019	7mer-m8	53242012	53242035	157.00	-22.73
CAediting_1386478	chr19_53242053_-	ENSG00000197928.9	ENST00000594681	hsa-miR-3943	53242049	53242055	7mer-m8	53242048	53242068	150.00	-24.99
CAediting_1386479	chr19_53242067_-	ENSG00000197928.9	ENST00000594681	hsa-miR-4720-5p	53242063	53242069	7mer-m8	53242062	53242083	153.00	-15.99
CAediting_1386479	chr19_53242067_-	ENSG00000197928.9	ENST00000594681	hsa-miR-4799-3p	53242063	53242069	7mer-m8	53242062	53242081	148.00	-14.93
CAediting_1386479	chr19_53242067_-	ENSG00000197928.9	ENST00000594681	hsa-miR-5588-5p	53242063	53242069	7mer-m8	53242062	53242082	156.00	-17.36
CAediting_1386479	chr19_53242067_-	ENSG00000197928.9	ENST00000594681	hsa-miR-9851-5p	53242062	53242068	7mer-m8	53242061	53242082	153.00	-14.75
CAediting_1386482	chr19_53242078_-	ENSG00000197928.9	ENST00000594681	hsa-miR-3622a-5p	53242073	53242079	7mer-m8	53242072	53242095	147.00	-25.29

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1386450	chr19_53235997_-	ENSG00000197928.9	ENST00000598513	hsa-miR-3190-5p	53235996	53236002	7mer-m8	53235995	53236014	146	-20.24
CAediting_1386450	chr19_53235997_-	ENSG00000197928.9	ENST00000598513	hsa-miR-548s	53235997	53236003	7mer-m8	53235996	53236020	147	-15.89
CAediting_1386451	chr19_53236017_-	ENSG00000197928.9	ENST00000598513	hsa-miR-6818-3p	53236017	53236023	7mer-m8	53236016	53236037	140	-12.56
CAediting_1386451	chr19_53236017_-	ENSG00000197928.9	ENST00000598513	hsa-miR-6888-3p	53236015	53236021	7mer-m8	53236014	53236034	154	-14.28
CAediting_1386450	chr19_53235997_-	ENSG00000197928.9	ENST00000333952	hsa-miR-3190-5p	53235996	53236002	7mer-m8	53235995	53236014	146	-20.24
CAediting_1386450	chr19_53235997_-	ENSG00000197928.9	ENST00000333952	hsa-miR-548s	53235997	53236003	7mer-m8	53235996	53236020	147	-15.89
CAediting_1386451	chr19_53236017_-	ENSG00000197928.9	ENST00000333952	hsa-miR-6818-3p	53236017	53236023	7mer-m8	53236016	53236037	140	-12.56
CAediting_1386451	chr19_53236017_-	ENSG00000197928.9	ENST00000333952	hsa-miR-6888-3p	53236015	53236021	7mer-m8	53236014	53236034	154	-14.28
CAediting_1386480	chr19_53242069_-	ENSG00000197928.9	ENST00000594681	hsa-miR-10399-5p	53242067	53242074	8mer-1a	53242067	53242088	149	-12.19
CAediting_1386481	chr19_53242070_-	ENSG00000197928.9	ENST00000594681	hsa-miR-10399-5p	53242067	53242074	8mer-1a	53242067	53242088	149	-12.19
CAediting_1386479	chr19_53242067_-	ENSG00000197928.9	ENST00000594681	hsa-miR-133a-5p	53242062	53242068	7mer-m8	53242061	53242082	146	-15.09
CAediting_1386479	chr19_53242067_-	ENSG00000197928.9	ENST00000594681	hsa-miR-133a-5p	53242062	53242068	7mer-m8	53242061	53242082	146	-15.09
CAediting_1386479	chr19_53242067_-	ENSG00000197928.9	ENST00000594681	hsa-miR-138-5p	53242062	53242067	6mer	53242061	53242082	143	-24.99
CAediting_1386479	chr19_53242067_-	ENSG00000197928.9	ENST00000594681	hsa-miR-138-5p	53242062	53242067	6mer	53242061	53242082	143	-24.99
CAediting_1386477	chr19_53242043_-	ENSG00000197928.9	ENST00000594681	hsa-miR-1976	53242038	53242045	8mer-1a	53242038	53242058	149	-24.39
CAediting_1386470	chr19_53241958_-	ENSG00000197928.9	ENST00000594681	hsa-miR-19b-1-5p	53241957	53241963	7mer-m8	53241956	53241977	149	-20.04
CAediting_1386470	chr19_53241958_-	ENSG00000197928.9	ENST00000594681	hsa-miR-19b-2-5p	53241957	53241963	7mer-m8	53241956	53241978	147	-13.36
CAediting_1386475	chr19_53242021_-	ENSG00000197928.9	ENST00000594681	hsa-miR-3615	53242020	53242026	7mer-m8	53242019	53242039	155	-24.7
CAediting_1386485	chr19_53242213_-	ENSG00000197928.9	ENST00000594681	hsa-miR-4316	53242212	53242218	7mer-m8	53242211	53242227	140	-14.17
CAediting_1386479	chr19_53242067_-	ENSG00000197928.9	ENST00000594681	hsa-miR-4774-5p	53242063	53242069	7mer-m8	53242062	53242081	154	-17.37
CAediting_1386476	chr19_53242028_-	ENSG00000197928.9	ENST00000594681	hsa-miR-498-5p	53242028	53242034	7mer-m8	53242027	53242049	142	-9.9
CAediting_1386484	chr19_53242204_-	ENSG00000197928.9	ENST00000594681	hsa-miR-5089-5p	53242199	53242205	7mer-m8	53242198	53242221	144	-17.09
CAediting_1386480	chr19_53242069_-	ENSG00000197928.9	ENST00000594681	hsa-miR-6504-3p	53242067	53242074	8mer-1a	53242067	53242088	146	-12.91
CAediting_1386481	chr19_53242070_-	ENSG00000197928.9	ENST00000594681	hsa-miR-6504-3p	53242067	53242074	8mer-1a	53242067	53242088	146	-12.91
CAediting_1386477	chr19_53242043_-	ENSG00000197928.9	ENST00000594681	hsa-miR-6747-3p	53242040	53242047	8mer-1a	53242040	53242062	150	-24.51
CAediting_1386478	chr19_53242053_-	ENSG00000197928.9	ENST00000594681	hsa-miR-6778-3p	53242050	53242056	7mer-m8	53242049	53242069	145	-17
CAediting_1386481	chr19_53242070_-	ENSG00000197928.9	ENST00000594681	hsa-miR-7151-3p	53242069	53242076	8mer-1a	53242069	53242085	142	-14.64
CAediting_1386485	chr19_53242213_-	ENSG00000197928.9	ENST00000594681	hsa-miR-9986	53242212	53242217	6mer	53242211	53242229	144	-25.94
CAediting_1386485	chr19_53242213_-	ENSG00000197928.9	ENST00000598806	hsa-miR-4316	53242212	53242218	7mer-m8	53242211	53242227	140	-14.17
CAediting_1386484	chr19_53242204_-	ENSG00000197928.9	ENST00000598806	hsa-miR-5089-5p	53242199	53242205	7mer-m8	53242198	53242221	144	-17.09
CAediting_1386485	chr19_53242213_-	ENSG00000197928.9	ENST00000598806	hsa-miR-9986	53242212	53242217	6mer	53242211	53242229	144	-25.94

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_688081	chr9_63819627_+	ENSG00000197928.9	ENST00000601828	hsa-miR-4477b	53243413	53243419	7mer-m8	53243412	53243435	154	-10.78
CAediting_77128	chr1_85133844_+	ENSG00000197928.9	ENST00000598513	hsa-miR-4423-3p	53235910	53235916	7mer-m8	53235909	53235929	140	-14.25
CAediting_580943	chr7_100356700_+	ENSG00000197928.9	ENST00000598513	hsa-miR-6840-3p	53236126	53236132	7mer-m8	53236125	53236146	140	-22.84
CAediting_524911	chr7_5495852_-	ENSG00000197928.9	ENST00000598513	hsa-miR-589-3p	53236185	53236191	7mer-m8	53236184	53236208	161	-19.67
CAediting_77128	chr1_85133844_+	ENSG00000197928.9	ENST00000333952	hsa-miR-4423-3p	53235910	53235916	7mer-m8	53235909	53235929	140	-14.25
CAediting_580943	chr7_100356700_+	ENSG00000197928.9	ENST00000333952	hsa-miR-6840-3p	53236126	53236132	7mer-m8	53236125	53236146	140	-22.84
CAediting_524911	chr7_5495852_-	ENSG00000197928.9	ENST00000333952	hsa-miR-589-3p	53236185	53236191	7mer-m8	53236184	53236208	161	-19.67
CAediting_1229413	chr17_67471544_+	ENSG00000197928.9	ENST00000599012	hsa-miR-548aa	53241653	53241659	7mer-m8	53241652	53241676	151	-15.44
CAediting_1351755	chr19_40282625_-	ENSG00000197928.9	ENST00000599012	hsa-miR-641	53241633	53241638	6mer	53241632	53241654	143	-19.49
CAediting_442554	chr5_154685830_+	ENSG00000197928.9	ENST00000599012	hsa-miR-1303	53241532	53241538	7mer-m8	53241531	53241551	154	-18.99

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_524911	chr7_5495852_-	ENSG00000197928.9	ENST00000598513	hsa-miR-589-3p	53236660	53236667	8mer-1a	53236660	53236682	143	-13.21
CAediting_524911	chr7_5495852_-	ENSG00000197928.9	ENST00000333952	hsa-miR-589-3p	53236660	53236667	8mer-1a	53236660	53236682	143	-13.21

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for ZNF677

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST

ENST type

RNA structure without RNA A-to-I editing.

RNA structure with RNA A-to-I editing.

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID

ENST

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

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Relation with ADAR for ZNF677

Correlation between ADAR gene expression and RNA editing frequency

Cancer

CAeditomID

position

ADAR1 (p-val)

ADAR1 (coeff.)

ADAR2 (p-val)

ADAR2 (coeff.)

ADAR3 (p-val)

ADAR3 (coeff.)

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Relation with cancer stages for ZNF677

Correlation between Cancer stages and RNA editing frequency

Cancer

Stage_type

CAeditomID

position

P-val

Coeff.

Top

Relation with survival for ZNF677

Correlation between RNA editing and survival

Cancer

CAeditomID

position

KMpvalue

Coxpvalue

CoxHR

Top

RelatedDrugs for ZNF677

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for ZNF677

Diseases associated with this gene.
(DisGeNet 7.0)

Gene

Disease ID

Disease name

# pubmeds

Source

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene