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![]() | Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples |
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![]() | The effects of the RNA editing to the stability of the RNA structures |
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Editing gene: IFI16 (CAeditome ID:3428) |
Gene summary for IFI16 |
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Gene information | Gene symbol | IFI16 | Gene ID | 3428 |
Gene name | interferon gamma inducible protein 16 | |
Synonyms | IFNGIP1|PYHIN2 | |
Cytomap | 1q23.1 | |
Type of gene | protein-coding | |
Description | gamma-interferon-inducible protein 16interferon-gamma induced protein IFI 16interferon-inducible myeloid differentiation transcriptional activator | |
Modification date | 20210518 | |
UniProtAcc | Q16666 | |
Context | - 33712724(Increased expression of IFI16 predicts adverse prognosis in multiple myeloma) |
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Gene | GO ID | GO term | PubMed ID |
IFI16 | GO:0042771 | Gamma-interferon-inducible protein 16 | 14654789 |
IFI16 | GO:0000978 | Gamma-interferon-inducible protein 16 | 24413532 |
IFI16 | GO:0001227 | Gamma-interferon-inducible protein 16 | 24413532 |
IFI16 | GO:0003690 | Gamma-interferon-inducible protein 16 | 7536752 |
IFI16 | GO:0008134 | Gamma-interferon-inducible protein 16 | 12894224 |
IFI16 | GO:0008134 | Gamma-interferon-inducible protein 16 | 22291595 |
IFI16 | GO:0000122 | Gamma-interferon-inducible protein 16 | 12894224 |
IFI16 | GO:0000122 | Gamma-interferon-inducible protein 16 | 24413532 |
IFI16 | GO:0002218 | Gamma-interferon-inducible protein 16 | 21575908 |
IFI16 | GO:0030224 | Gamma-interferon-inducible protein 16 | 9766636 |
IFI16 | GO:0032731 | Gamma-interferon-inducible protein 16 | 21575908 |
IFI16 | GO:0042149 | Gamma-interferon-inducible protein 16 | 21573174 |
IFI16 | GO:0043392 | Gamma-interferon-inducible protein 16 | 22291595 |
IFI16 | GO:0045071 | Gamma-interferon-inducible protein 16 | 22291595 |
IFI16 | GO:0045824 | Gamma-interferon-inducible protein 16 | 22046441 |
IFI16 | GO:0045892 | Gamma-interferon-inducible protein 16 | 9642285 |
IFI16 | GO:0045944 | Gamma-interferon-inducible protein 16 | 11146555 |
IFI16 | GO:0051607 | Gamma-interferon-inducible protein 16 | 21478870 |
IFI16 | GO:0071479 | Gamma-interferon-inducible protein 16 | 14654789 |
IFI16 | GO:2000117 | Gamma-interferon-inducible protein 16 | 22046441 |
IFI16 | GO:0005634 | Gamma-interferon-inducible protein 16 | 19158679 |
IFI16 | GO:0005634 | Gamma-interferon-inducible protein 16 | 24413532 |
IFI16 | GO:0005634 | Gamma-interferon-inducible protein 16 | 24531343 |
IFI16 | GO:0005634 | Gamma-interferon-inducible protein 16 | 7536752 |
IFI16 | GO:0005654 | Gamma-interferon-inducible protein 16 | 0000052 |
IFI16 | GO:0005654 | Gamma-interferon-inducible protein 16 | 14654789 |
IFI16 | GO:0005730 | Gamma-interferon-inducible protein 16 | 0000052 |
IFI16 | GO:0005730 | Gamma-interferon-inducible protein 16 | 14654789 |
IFI16 | GO:0005829 | Gamma-interferon-inducible protein 16 | 0000052 |
IFI16 | GO:0016607 | Gamma-interferon-inducible protein 16 | 19158679 |
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RNA A-to-I events for IFI16 |
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CAediting_115077(159011108, +), CAediting_115078(159011110, +), CAediting_115079(159011207, +), CAediting_115080(159011222, +), CAediting_115081(159013272, +), CAediting_115082(159013350, +), CAediting_115083(159013356, +), CAediting_115084(159013357, +), CAediting_115085(159013360, +), CAediting_115086(159013367, +), CAediting_115087(159013375, +), CAediting_115088(159039493, +), CAediting_115089(159050574, +), CAediting_115090(159050600, +), CAediting_115091(159050615, +), CAediting_115092(159050629, +), CAediting_115093(159050630, +), CAediting_115094(159050632, +), CAediting_115095(159050641, +), CAediting_115096(159050659, +), CAediting_115097(159050671, +), CAediting_115098(159050676, +), CAediting_115099(159050679, +), CAediting_115100(159050688, +), CAediting_115101(159050689, +), CAediting_115102(159050693, +), CAediting_115103(159050695, +), CAediting_115104(159050706, +), CAediting_115105(159050708, +), CAediting_115106(159050709, +), CAediting_115107(159050713, +), CAediting_115108(159050716, +), CAediting_115109(159050717, +), CAediting_115110(159050719, +), CAediting_115111(159050724, +), CAediting_115112(159050738, +), CAediting_115113(159050748, +), CAediting_115114(159050749, +), CAediting_115115(159050750, +), CAediting_115116(159050752, +), CAediting_115117(159050753, +), CAediting_115118(159050754, +), CAediting_115119(159050755, +), CAediting_115120(159050961, +), CAediting_115121(159051083, +), CAediting_115122(159051105, +), CAediting_115123(159051106, +), CAediting_115124(159051119, +), CAediting_115125(159051121, +), CAediting_115126(159051131, +), CAediting_115127(159051134, +), CAediting_115128(159051141, +), CAediting_115129(159051147, +), CAediting_115130(159051152, +), CAediting_115131(159051161, +), CAediting_115132(159051167, +), CAediting_115133(159051178, +), CAediting_115134(159051185, +), CAediting_115135(159051187, +), CAediting_115136(159051190, +), CAediting_115137(159051194, +), CAediting_115138(159051202, +), CAediting_115139(159051203, +), CAediting_115140(159051205, +), CAediting_115141(159051206, +), CAediting_115142(159051213, +), CAediting_115143(159051214, +), CAediting_115144(159051224, +), CAediting_115145(159051226, +), CAediting_115146(159051228, +), CAediting_115147(159051231, +), CAediting_115148(159051234, +), CAediting_115149(159051236, +), CAediting_115150(159051244, +), CAediting_115151(159051249, +), CAediting_115152(159051279, +), |
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RNA editing positional annotations for IFI16 using Annovar |
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CAeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
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CAeditome ID | Position | Variant type |
CAediting_115077 | chr1_159011108_+ | ncRNA_intronic |
CAediting_115078 | chr1_159011110_+ | ncRNA_intronic |
CAediting_115079 | chr1_159011207_+ | ncRNA_intronic |
CAediting_115080 | chr1_159011222_+ | ncRNA_intronic |
CAediting_115081 | chr1_159013272_+ | ncRNA_intronic |
CAediting_115082 | chr1_159013350_+ | ncRNA_intronic |
CAediting_115083 | chr1_159013356_+ | ncRNA_intronic |
CAediting_115084 | chr1_159013357_+ | ncRNA_intronic |
CAediting_115085 | chr1_159013360_+ | ncRNA_intronic |
CAediting_115086 | chr1_159013367_+ | ncRNA_intronic |
CAediting_115087 | chr1_159013375_+ | ncRNA_intronic |
CAediting_115088 | chr1_159039493_+ | ncRNA_intronic |
CAediting_115089 | chr1_159050574_+ | ncRNA_intronic |
CAediting_115090 | chr1_159050600_+ | ncRNA_intronic |
CAediting_115091 | chr1_159050615_+ | ncRNA_intronic |
CAediting_115092 | chr1_159050629_+ | ncRNA_intronic |
CAediting_115093 | chr1_159050630_+ | ncRNA_intronic |
CAediting_115094 | chr1_159050632_+ | ncRNA_intronic |
CAediting_115095 | chr1_159050641_+ | ncRNA_intronic |
CAediting_115096 | chr1_159050659_+ | ncRNA_intronic |
CAediting_115097 | chr1_159050671_+ | ncRNA_intronic |
CAediting_115098 | chr1_159050676_+ | ncRNA_intronic |
CAediting_115099 | chr1_159050679_+ | ncRNA_intronic |
CAediting_115100 | chr1_159050688_+ | ncRNA_intronic |
CAediting_115101 | chr1_159050689_+ | ncRNA_intronic |
CAediting_115102 | chr1_159050693_+ | ncRNA_intronic |
CAediting_115103 | chr1_159050695_+ | ncRNA_intronic |
CAediting_115104 | chr1_159050706_+ | ncRNA_intronic |
CAediting_115105 | chr1_159050708_+ | ncRNA_intronic |
CAediting_115106 | chr1_159050709_+ | ncRNA_intronic |
CAediting_115107 | chr1_159050713_+ | ncRNA_intronic |
CAediting_115108 | chr1_159050716_+ | ncRNA_intronic |
CAediting_115109 | chr1_159050717_+ | ncRNA_intronic |
CAediting_115110 | chr1_159050719_+ | ncRNA_intronic |
CAediting_115111 | chr1_159050724_+ | ncRNA_intronic |
CAediting_115112 | chr1_159050738_+ | ncRNA_intronic |
CAediting_115113 | chr1_159050748_+ | ncRNA_intronic |
CAediting_115114 | chr1_159050749_+ | ncRNA_intronic |
CAediting_115115 | chr1_159050750_+ | ncRNA_intronic |
CAediting_115116 | chr1_159050752_+ | ncRNA_intronic |
CAediting_115117 | chr1_159050753_+ | ncRNA_intronic |
CAediting_115118 | chr1_159050754_+ | ncRNA_intronic |
CAediting_115119 | chr1_159050755_+ | ncRNA_intronic |
CAediting_115120 | chr1_159050961_+ | ncRNA_intronic |
CAediting_115121 | chr1_159051083_+ | ncRNA_intronic |
CAediting_115122 | chr1_159051105_+ | ncRNA_intronic |
CAediting_115123 | chr1_159051106_+ | ncRNA_intronic |
CAediting_115124 | chr1_159051119_+ | ncRNA_intronic |
CAediting_115125 | chr1_159051121_+ | ncRNA_intronic |
CAediting_115126 | chr1_159051131_+ | ncRNA_intronic |
CAediting_115127 | chr1_159051134_+ | ncRNA_intronic |
CAediting_115128 | chr1_159051141_+ | ncRNA_intronic |
CAediting_115129 | chr1_159051147_+ | ncRNA_intronic |
CAediting_115130 | chr1_159051152_+ | ncRNA_intronic |
CAediting_115131 | chr1_159051161_+ | ncRNA_intronic |
CAediting_115132 | chr1_159051167_+ | ncRNA_intronic |
CAediting_115133 | chr1_159051178_+ | ncRNA_intronic |
CAediting_115134 | chr1_159051185_+ | ncRNA_intronic |
CAediting_115135 | chr1_159051187_+ | ncRNA_intronic |
CAediting_115136 | chr1_159051190_+ | ncRNA_intronic |
CAediting_115137 | chr1_159051194_+ | ncRNA_intronic |
CAediting_115138 | chr1_159051202_+ | ncRNA_intronic |
CAediting_115139 | chr1_159051203_+ | ncRNA_intronic |
CAediting_115140 | chr1_159051205_+ | ncRNA_intronic |
CAediting_115141 | chr1_159051206_+ | ncRNA_intronic |
CAediting_115142 | chr1_159051213_+ | ncRNA_intronic |
CAediting_115143 | chr1_159051214_+ | ncRNA_intronic |
CAediting_115144 | chr1_159051224_+ | ncRNA_intronic |
CAediting_115145 | chr1_159051226_+ | ncRNA_intronic |
CAediting_115146 | chr1_159051228_+ | ncRNA_intronic |
CAediting_115147 | chr1_159051231_+ | ncRNA_intronic |
CAediting_115148 | chr1_159051234_+ | ncRNA_intronic |
CAediting_115149 | chr1_159051236_+ | ncRNA_intronic |
CAediting_115150 | chr1_159051244_+ | ncRNA_intronic |
CAediting_115151 | chr1_159051249_+ | ncRNA_intronic |
CAediting_115152 | chr1_159051279_+ | ncRNA_intronic |
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CAeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
CAediting_115077 | chr1_159011108_+ | SINE | Alu | AluSz |
CAediting_115078 | chr1_159011110_+ | SINE | Alu | AluSz |
CAediting_115079 | chr1_159011207_+ | SINE | Alu | AluSz |
CAediting_115080 | chr1_159011222_+ | SINE | Alu | AluSz |
CAediting_115081 | chr1_159013272_+ | SINE | Alu | AluSc8 |
CAediting_115082 | chr1_159013350_+ | SINE | Alu | AluSc8 |
CAediting_115083 | chr1_159013356_+ | SINE | Alu | AluSc8 |
CAediting_115084 | chr1_159013357_+ | SINE | Alu | AluSc8 |
CAediting_115085 | chr1_159013360_+ | SINE | Alu | AluSc8 |
CAediting_115086 | chr1_159013367_+ | SINE | Alu | AluSc8 |
CAediting_115087 | chr1_159013375_+ | SINE | Alu | AluSc8 |
CAediting_115088 | chr1_159039493_+ | SINE | Alu | AluSx |
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RNA A-to-I editing events in the alternative splicing sites for IFI16 |
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AStype | CAeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
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Differntial gene expression between RNA A-to-I edited versus non-edited samples for IFI16 |
![]() * The grey color means N/A. |
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Protein coding region RNA A-to-I editings for IFI16 |
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The effects of the RNA editing to the miRNA binding sites for IFI16 |
**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page. |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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The effects of the RNA editing to the stability of the RNA structures for IFI16 |
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ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
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CAeditom_ID | ENST | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
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Relation with ADAR for IFI16 |
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Cancer | CAeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
SKCM | CAediting_115108 | chr1_159050716_+ | 0.00160658895877503 | 0.411965589090958 | . | . | . | . |
LUSC | CAediting_115113 | chr1_159050748_+ | 0.0286422603067315 | 0.303649347641238 | . | . | . | . |
SKCM | CAediting_115113 | chr1_159050748_+ | 0.03205242544801 | 0.220153072620891 | . | . | . | . |
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Relation with cancer stages for IFI16 |
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Cancer | Stage_type | CAeditomID | position | P-val | Coeff. |
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Relation with survival for IFI16 |
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Cancer | CAeditomID | position | KMpvalue | Coxpvalue | CoxHR |
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RelatedDrugs for IFI16 |
![]() (DrugBank Version 5.1.8 2021-01-03) |
Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for IFI16 |
![]() (DisGeNet 7.0) |
Gene | Disease ID | Disease name | # pubmeds | Source |