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![]() | Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples |
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![]() | The effects of the RNA editing to the stability of the RNA structures |
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Editing gene: NEK5 (CAeditome ID:341676) |
Gene summary for NEK5 |
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Gene information | Gene symbol | NEK5 | Gene ID | 341676 |
Gene name | NIMA related kinase 5 | |
Synonyms | - | |
Cytomap | 13q14.3 | |
Type of gene | protein-coding | |
Description | serine/threonine-protein kinase Nek5NIMA (never in mitosis gene a)-related kinase 5nimA-related protein kinase 5 | |
Modification date | 20210518 | |
UniProtAcc | Q6P3R8 | |
Context |
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Gene | GO ID | GO term | PubMed ID |
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RNA A-to-I events for NEK5 |
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CAediting_965856(52034797, -), CAediting_965857(52034819, -), CAediting_965858(52036551, -), CAediting_965859(52036580, -), CAediting_965860(52036676, -), CAediting_965861(52036695, -), CAediting_965862(52036708, -), CAediting_965863(52050991, -), CAediting_965864(52062475, -), CAediting_965865(52062553, -), CAediting_965866(52062569, -), CAediting_965867(52067829, -), CAediting_965868(52067830, -), CAediting_965869(52081446, -), CAediting_965870(52082307, -), CAediting_965871(52087718, -), CAediting_965872(52088026, -), CAediting_965873(52092720, -), CAediting_965874(52105498, -), CAediting_965875(52105500, -), CAediting_965876(52121226, -), CAediting_965877(52121261, -), CAediting_965878(52121283, -), CAediting_965879(52121287, -), CAediting_965880(52121323, -), CAediting_965881(52121339, -), CAediting_965882(52121348, -), CAediting_965883(52121397, -), CAediting_965884(52121975, -), CAediting_965885(52122040, -), CAediting_965886(52122049, -), CAediting_965887(52122066, -), CAediting_965888(52122645, -), |
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RNA editing positional annotations for NEK5 using Annovar |
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CAeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
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CAeditome ID | Position | Variant type |
CAediting_965856 | chr13_52034797_- | ncRNA_exonic |
CAediting_965857 | chr13_52034819_- | ncRNA_exonic |
CAediting_965858 | chr13_52036551_- | ncRNA_exonic |
CAediting_965859 | chr13_52036580_- | ncRNA_exonic |
CAediting_965860 | chr13_52036676_- | ncRNA_exonic |
CAediting_965861 | chr13_52036695_- | ncRNA_exonic |
CAediting_965862 | chr13_52036708_- | ncRNA_exonic |
CAediting_965863 | chr13_52050991_- | ncRNA_intronic |
CAediting_965864 | chr13_52062475_- | intronic |
CAediting_965865 | chr13_52062553_- | intronic |
CAediting_965866 | chr13_52062569_- | intronic |
CAediting_965867 | chr13_52067829_- | intronic |
CAediting_965868 | chr13_52067830_- | intronic |
CAediting_965869 | chr13_52081446_- | intronic |
CAediting_965870 | chr13_52082307_- | exonic |
CAediting_965871 | chr13_52087718_- | intronic |
CAediting_965872 | chr13_52088026_- | intronic |
CAediting_965873 | chr13_52092720_- | intronic |
CAediting_965874 | chr13_52105498_- | intronic |
CAediting_965875 | chr13_52105500_- | intronic |
CAediting_965876 | chr13_52121226_- | intronic |
CAediting_965877 | chr13_52121261_- | intronic |
CAediting_965878 | chr13_52121283_- | intronic |
CAediting_965879 | chr13_52121287_- | intronic |
CAediting_965880 | chr13_52121323_- | intronic |
CAediting_965881 | chr13_52121339_- | intronic |
CAediting_965882 | chr13_52121348_- | intronic |
CAediting_965883 | chr13_52121397_- | intronic |
CAediting_965884 | chr13_52121975_- | intronic |
CAediting_965885 | chr13_52122040_- | intronic |
CAediting_965886 | chr13_52122049_- | intronic |
CAediting_965887 | chr13_52122066_- | intronic |
CAediting_965888 | chr13_52122645_- | intronic |
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CAeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
CAediting_965856 | chr13_52034797_- | SINE | Alu | AluJb |
CAediting_965857 | chr13_52034819_- | SINE | Alu | AluJb |
CAediting_965858 | chr13_52036551_- | SINE | Alu | AluSq |
CAediting_965859 | chr13_52036580_- | SINE | Alu | AluSq |
CAediting_965860 | chr13_52036676_- | SINE | Alu | AluSq |
CAediting_965861 | chr13_52036695_- | SINE | Alu | AluSq |
CAediting_965862 | chr13_52036708_- | SINE | Alu | AluSq |
CAediting_965863 | chr13_52050991_- | SINE | Alu | AluSg |
CAediting_965864 | chr13_52062475_- | SINE | Alu | AluSg |
CAediting_965865 | chr13_52062553_- | SINE | Alu | AluSg |
CAediting_965866 | chr13_52062569_- | SINE | Alu | AluSg |
CAediting_965867 | chr13_52067829_- | SINE | Alu | AluSz6 |
CAediting_965868 | chr13_52067830_- | SINE | Alu | AluSz6 |
CAediting_965869 | chr13_52081446_- | SINE | Alu | FLAM_A |
CAediting_965870 | chr13_52082307_- | SINE | Alu | AluSq2 |
CAediting_965871 | chr13_52087718_- | SINE | Alu | AluSc8 |
CAediting_965872 | chr13_52088026_- | SINE | Alu | AluJo |
CAediting_965873 | chr13_52092720_- | SINE | Alu | AluSx |
CAediting_965874 | chr13_52105498_- | SINE | Alu | FLAM_C |
CAediting_965875 | chr13_52105500_- | SINE | Alu | FLAM_C |
CAediting_965876 | chr13_52121226_- | SINE | Alu | AluJb |
CAediting_965877 | chr13_52121261_- | SINE | Alu | AluJb |
CAediting_965878 | chr13_52121283_- | SINE | Alu | AluJb |
CAediting_965879 | chr13_52121287_- | SINE | Alu | AluJb |
CAediting_965880 | chr13_52121323_- | SINE | Alu | AluJb |
CAediting_965881 | chr13_52121339_- | SINE | Alu | AluJb |
CAediting_965882 | chr13_52121348_- | SINE | Alu | AluJb |
CAediting_965883 | chr13_52121397_- | SINE | Alu | AluJb |
CAediting_965884 | chr13_52121975_- | SINE | Alu | FLAM_A |
CAediting_965885 | chr13_52122040_- | SINE | Alu | FLAM_A |
CAediting_965886 | chr13_52122049_- | SINE | Alu | FLAM_A |
CAediting_965888 | chr13_52122645_- | SINE | Alu | AluSg |
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RNA A-to-I editing events in the alternative splicing sites for NEK5 |
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AStype | CAeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
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Differntial gene expression between RNA A-to-I edited versus non-edited samples for NEK5 |
![]() * The grey color means N/A. |
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Protein coding region RNA A-to-I editings for NEK5 |
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The effects of the RNA editing to the miRNA binding sites for NEK5 |
**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page. |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
CAediting_980496 | chr14_31014685_- | ENSG00000197168.10 | ENST00000355568 | hsa-miR-624-3p | 52064993 | 52064999 | 7mer-m8 | 52064992 | 52065012 | 143 | -18.27 |
CAediting_1399425 | chr20_1392958_- | ENSG00000197168.10 | ENST00000465811 | hsa-miR-6869-5p | 52050191 | 52050198 | 8mer-1a | 52050191 | 52050212 | 141 | -15.51 |
CAediting_1368054 | chr19_46709310_- | ENSG00000197168.10 | ENST00000355568 | hsa-miR-320e | 52065175 | 52065182 | 8mer-1a | 52065175 | 52065192 | 152 | -22.68 |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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The effects of the RNA editing to the stability of the RNA structures for NEK5 |
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ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
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CAeditom_ID | ENST | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
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Relation with ADAR for NEK5 |
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Cancer | CAeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
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Relation with cancer stages for NEK5 |
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Cancer | Stage_type | CAeditomID | position | P-val | Coeff. |
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Relation with survival for NEK5 |
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Cancer | CAeditomID | position | KMpvalue | Coxpvalue | CoxHR |
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RelatedDrugs for NEK5 |
![]() (DrugBank Version 5.1.8 2021-01-03) |
Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
NEK5 | Q6P3R8 | DB12010 | Fostamatinib | Serine/threonine-protein kinase Nek5 | SmallMoleculeDrug | approved|investigational |
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RelatedDiseases for NEK5 |
![]() (DisGeNet 7.0) |
Gene | Disease ID | Disease name | # pubmeds | Source |