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![]() | Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples |
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![]() | The effects of the RNA editing to the stability of the RNA structures |
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Editing gene: FAM221A (CAeditome ID:340277) |
Gene summary for FAM221A |
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Gene information | Gene symbol | FAM221A | Gene ID | 340277 |
Gene name | family with sequence similarity 221 member A | |
Synonyms | C7orf46 | |
Cytomap | 7p15.3 | |
Type of gene | protein-coding | |
Description | protein FAM221Auncharacterized protein C7orf46 | |
Modification date | 20210518 | |
UniProtAcc | A4D161 | |
Context |
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Gene | GO ID | GO term | PubMed ID |
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RNA A-to-I events for FAM221A |
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CAediting_532421(23685170, +), CAediting_532422(23686364, +), CAediting_532423(23686381, +), CAediting_532424(23686390, +), CAediting_532425(23686393, +), CAediting_532426(23686403, +), CAediting_532427(23686405, +), CAediting_532428(23692442, +), CAediting_532429(23692445, +), CAediting_532430(23692515, +), CAediting_532431(23692594, +), CAediting_532432(23694988, +), CAediting_532433(23695049, +), CAediting_532434(23695070, +), CAediting_532435(23695073, +), CAediting_532436(23695098, +), CAediting_532437(23695160, +), CAediting_532438(23695166, +), CAediting_532439(23695174, +), CAediting_532440(23695473, +), CAediting_532441(23695490, +), CAediting_532442(23695570, +), CAediting_532443(23695582, +), CAediting_532444(23696287, +), CAediting_532445(23696303, +), CAediting_532446(23696304, +), CAediting_532447(23696325, +), CAediting_532448(23696329, +), CAediting_532449(23696333, +), CAediting_532450(23696343, +), CAediting_532451(23696348, +), CAediting_532452(23696357, +), CAediting_532453(23696359, +), CAediting_532454(23696362, +), CAediting_532455(23696367, +), CAediting_532456(23696371, +), CAediting_532457(23696372, +), CAediting_532458(23696399, +), CAediting_532459(23696401, +), CAediting_532460(23696407, +), CAediting_532461(23696408, +), CAediting_532462(23696411, +), CAediting_532463(23696442, +), CAediting_532464(23696447, +), CAediting_532465(23696451, +), CAediting_532466(23696459, +), CAediting_532467(23696466, +), CAediting_532468(23696471, +), CAediting_532469(23696479, +), CAediting_532470(23696484, +), CAediting_532471(23696492, +), CAediting_532472(23696496, +), CAediting_532473(23696505, +), CAediting_532474(23696521, +), CAediting_532475(23696546, +), CAediting_532476(23696569, +), CAediting_532477(23697806, +), CAediting_532478(23697807, +), CAediting_532479(23697816, +), CAediting_532480(23697821, +), CAediting_532481(23697831, +), CAediting_532482(23697851, +), CAediting_532483(23697852, +), CAediting_532484(23697853, +), CAediting_532485(23697856, +), CAediting_532486(23697869, +), CAediting_532487(23697877, +), CAediting_532488(23697881, +), CAediting_532489(23697885, +), CAediting_532490(23697891, +), CAediting_532491(23697893, +), CAediting_532492(23697899, +), CAediting_532493(23697901, +), CAediting_532494(23697917, +), CAediting_532495(23697960, +), CAediting_532496(23697965, +), CAediting_532497(23697968, +), CAediting_532498(23697971, +), CAediting_532499(23697994, +), CAediting_532500(23697995, +), CAediting_532501(23697999, +), CAediting_532502(23698021, +), CAediting_532503(23698022, +), CAediting_532504(23698034, +), CAediting_532505(23698050, +), CAediting_532506(23699247, +), CAediting_532507(23699251, +), CAediting_532508(23699564, +), CAediting_532509(23699623, +), CAediting_532510(23699683, +), CAediting_532511(23699687, +), CAediting_532512(23699751, +), CAediting_532513(23699776, +), CAediting_532514(23699777, +), CAediting_532515(23699780, +), CAediting_532516(23699785, +), CAediting_532517(23701446, +), |
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RNA editing positional annotations for FAM221A using Annovar |
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CAeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
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CAeditome ID | Position | Variant type |
CAediting_532421 | chr7_23685170_+ | ncRNA_intronic |
CAediting_532422 | chr7_23686364_+ | exonic |
CAediting_532423 | chr7_23686381_+ | exonic |
CAediting_532424 | chr7_23686390_+ | exonic |
CAediting_532425 | chr7_23686393_+ | exonic |
CAediting_532426 | chr7_23686403_+ | ncRNA_intronic |
CAediting_532427 | chr7_23686405_+ | ncRNA_intronic |
CAediting_532428 | chr7_23692442_+ | ncRNA_exonic |
CAediting_532429 | chr7_23692445_+ | ncRNA_exonic |
CAediting_532430 | chr7_23692515_+ | ncRNA_exonic |
CAediting_532431 | chr7_23692594_+ | ncRNA_exonic |
CAediting_532432 | chr7_23694988_+ | ncRNA_intronic |
CAediting_532433 | chr7_23695049_+ | ncRNA_intronic |
CAediting_532434 | chr7_23695070_+ | ncRNA_intronic |
CAediting_532435 | chr7_23695073_+ | ncRNA_intronic |
CAediting_532436 | chr7_23695098_+ | ncRNA_intronic |
CAediting_532437 | chr7_23695160_+ | ncRNA_intronic |
CAediting_532438 | chr7_23695166_+ | ncRNA_intronic |
CAediting_532439 | chr7_23695174_+ | ncRNA_intronic |
CAediting_532440 | chr7_23695473_+ | ncRNA_intronic |
CAediting_532441 | chr7_23695490_+ | ncRNA_intronic |
CAediting_532442 | chr7_23695570_+ | ncRNA_intronic |
CAediting_532443 | chr7_23695582_+ | ncRNA_intronic |
CAediting_532444 | chr7_23696287_+ | ncRNA_intronic |
CAediting_532445 | chr7_23696303_+ | ncRNA_intronic |
CAediting_532446 | chr7_23696304_+ | ncRNA_intronic |
CAediting_532447 | chr7_23696325_+ | ncRNA_intronic |
CAediting_532448 | chr7_23696329_+ | ncRNA_intronic |
CAediting_532449 | chr7_23696333_+ | ncRNA_intronic |
CAediting_532450 | chr7_23696343_+ | ncRNA_intronic |
CAediting_532451 | chr7_23696348_+ | ncRNA_intronic |
CAediting_532452 | chr7_23696357_+ | ncRNA_intronic |
CAediting_532453 | chr7_23696359_+ | ncRNA_intronic |
CAediting_532454 | chr7_23696362_+ | ncRNA_intronic |
CAediting_532455 | chr7_23696367_+ | ncRNA_intronic |
CAediting_532456 | chr7_23696371_+ | ncRNA_intronic |
CAediting_532457 | chr7_23696372_+ | ncRNA_intronic |
CAediting_532458 | chr7_23696399_+ | ncRNA_intronic |
CAediting_532459 | chr7_23696401_+ | ncRNA_intronic |
CAediting_532460 | chr7_23696407_+ | ncRNA_intronic |
CAediting_532461 | chr7_23696408_+ | ncRNA_intronic |
CAediting_532462 | chr7_23696411_+ | ncRNA_intronic |
CAediting_532463 | chr7_23696442_+ | ncRNA_intronic |
CAediting_532464 | chr7_23696447_+ | ncRNA_intronic |
CAediting_532465 | chr7_23696451_+ | ncRNA_intronic |
CAediting_532466 | chr7_23696459_+ | ncRNA_intronic |
CAediting_532467 | chr7_23696466_+ | ncRNA_intronic |
CAediting_532468 | chr7_23696471_+ | ncRNA_intronic |
CAediting_532469 | chr7_23696479_+ | ncRNA_intronic |
CAediting_532470 | chr7_23696484_+ | ncRNA_intronic |
CAediting_532471 | chr7_23696492_+ | ncRNA_intronic |
CAediting_532472 | chr7_23696496_+ | ncRNA_intronic |
CAediting_532473 | chr7_23696505_+ | ncRNA_intronic |
CAediting_532474 | chr7_23696521_+ | ncRNA_intronic |
CAediting_532475 | chr7_23696546_+ | ncRNA_intronic |
CAediting_532476 | chr7_23696569_+ | ncRNA_intronic |
CAediting_532477 | chr7_23697806_+ | ncRNA_intronic |
CAediting_532478 | chr7_23697807_+ | ncRNA_intronic |
CAediting_532479 | chr7_23697816_+ | ncRNA_intronic |
CAediting_532480 | chr7_23697821_+ | ncRNA_intronic |
CAediting_532481 | chr7_23697831_+ | ncRNA_intronic |
CAediting_532482 | chr7_23697851_+ | ncRNA_intronic |
CAediting_532483 | chr7_23697852_+ | ncRNA_intronic |
CAediting_532484 | chr7_23697853_+ | ncRNA_intronic |
CAediting_532485 | chr7_23697856_+ | ncRNA_intronic |
CAediting_532486 | chr7_23697869_+ | ncRNA_intronic |
CAediting_532487 | chr7_23697877_+ | ncRNA_intronic |
CAediting_532488 | chr7_23697881_+ | ncRNA_intronic |
CAediting_532489 | chr7_23697885_+ | ncRNA_intronic |
CAediting_532490 | chr7_23697891_+ | ncRNA_intronic |
CAediting_532491 | chr7_23697893_+ | ncRNA_intronic |
CAediting_532492 | chr7_23697899_+ | ncRNA_intronic |
CAediting_532493 | chr7_23697901_+ | ncRNA_intronic |
CAediting_532494 | chr7_23697917_+ | ncRNA_intronic |
CAediting_532495 | chr7_23697960_+ | ncRNA_intronic |
CAediting_532496 | chr7_23697965_+ | ncRNA_intronic |
CAediting_532497 | chr7_23697968_+ | ncRNA_intronic |
CAediting_532498 | chr7_23697971_+ | ncRNA_intronic |
CAediting_532499 | chr7_23697994_+ | ncRNA_intronic |
CAediting_532500 | chr7_23697995_+ | ncRNA_intronic |
CAediting_532501 | chr7_23697999_+ | ncRNA_intronic |
CAediting_532502 | chr7_23698021_+ | ncRNA_intronic |
CAediting_532503 | chr7_23698022_+ | ncRNA_intronic |
CAediting_532504 | chr7_23698034_+ | ncRNA_intronic |
CAediting_532505 | chr7_23698050_+ | ncRNA_intronic |
CAediting_532506 | chr7_23699247_+ | ncRNA_intronic |
CAediting_532507 | chr7_23699251_+ | ncRNA_intronic |
CAediting_532508 | chr7_23699564_+ | ncRNA_intronic |
CAediting_532509 | chr7_23699623_+ | ncRNA_intronic |
CAediting_532510 | chr7_23699683_+ | ncRNA_intronic |
CAediting_532511 | chr7_23699687_+ | ncRNA_intronic |
CAediting_532512 | chr7_23699751_+ | ncRNA_intronic |
CAediting_532513 | chr7_23699776_+ | ncRNA_intronic |
CAediting_532514 | chr7_23699777_+ | ncRNA_intronic |
CAediting_532515 | chr7_23699780_+ | ncRNA_intronic |
CAediting_532516 | chr7_23699785_+ | ncRNA_intronic |
CAediting_532517 | chr7_23701446_+ | ncRNA_intronic |
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CAeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
CAediting_532421 | chr7_23685170_+ | SINE | Alu | AluSx3 |
CAediting_532422 | chr7_23686364_+ | SINE | Alu | AluJb |
CAediting_532423 | chr7_23686381_+ | SINE | Alu | AluJb |
CAediting_532424 | chr7_23686390_+ | SINE | Alu | AluJb |
CAediting_532425 | chr7_23686393_+ | SINE | Alu | AluJb |
CAediting_532426 | chr7_23686403_+ | SINE | Alu | AluJb |
CAediting_532427 | chr7_23686405_+ | SINE | Alu | AluJb |
CAediting_532428 | chr7_23692442_+ | SINE | Alu | AluSp |
CAediting_532429 | chr7_23692445_+ | SINE | Alu | AluSp |
CAediting_532430 | chr7_23692515_+ | SINE | Alu | AluSp |
CAediting_532431 | chr7_23692594_+ | SINE | Alu | AluSp |
CAediting_532432 | chr7_23694988_+ | SINE | Alu | AluJr |
CAediting_532433 | chr7_23695049_+ | SINE | Alu | AluJr |
CAediting_532434 | chr7_23695070_+ | SINE | Alu | AluJr |
CAediting_532435 | chr7_23695073_+ | SINE | Alu | AluJr |
CAediting_532436 | chr7_23695098_+ | SINE | Alu | AluJr |
CAediting_532437 | chr7_23695160_+ | SINE | Alu | AluJr |
CAediting_532438 | chr7_23695166_+ | SINE | Alu | AluJr |
CAediting_532439 | chr7_23695174_+ | SINE | Alu | AluJr |
CAediting_532440 | chr7_23695473_+ | SINE | Alu | AluSx |
CAediting_532441 | chr7_23695490_+ | SINE | Alu | AluSx |
CAediting_532442 | chr7_23695570_+ | SINE | Alu | AluSx |
CAediting_532443 | chr7_23695582_+ | SINE | Alu | AluSx |
CAediting_532444 | chr7_23696287_+ | SINE | Alu | AluJb |
CAediting_532445 | chr7_23696303_+ | SINE | Alu | AluJb |
CAediting_532446 | chr7_23696304_+ | SINE | Alu | AluJb |
CAediting_532447 | chr7_23696325_+ | SINE | Alu | AluJb |
CAediting_532448 | chr7_23696329_+ | SINE | Alu | AluJb |
CAediting_532449 | chr7_23696333_+ | SINE | Alu | AluJb |
CAediting_532450 | chr7_23696343_+ | SINE | Alu | AluJb |
CAediting_532451 | chr7_23696348_+ | SINE | Alu | AluJb |
CAediting_532452 | chr7_23696357_+ | SINE | Alu | AluJb |
CAediting_532453 | chr7_23696359_+ | SINE | Alu | AluJb |
CAediting_532454 | chr7_23696362_+ | SINE | Alu | AluJb |
CAediting_532455 | chr7_23696367_+ | SINE | Alu | AluJb |
CAediting_532456 | chr7_23696371_+ | SINE | Alu | AluJb |
CAediting_532457 | chr7_23696372_+ | SINE | Alu | AluJb |
CAediting_532458 | chr7_23696399_+ | SINE | Alu | AluJb |
CAediting_532459 | chr7_23696401_+ | SINE | Alu | AluJb |
CAediting_532460 | chr7_23696407_+ | SINE | Alu | AluJb |
CAediting_532461 | chr7_23696408_+ | SINE | Alu | AluJb |
CAediting_532462 | chr7_23696411_+ | SINE | Alu | AluJb |
CAediting_532463 | chr7_23696442_+ | SINE | Alu | AluJb |
CAediting_532464 | chr7_23696447_+ | SINE | Alu | AluJb |
CAediting_532465 | chr7_23696451_+ | SINE | Alu | AluJb |
CAediting_532466 | chr7_23696459_+ | SINE | Alu | AluJb |
CAediting_532467 | chr7_23696466_+ | SINE | Alu | AluJb |
CAediting_532468 | chr7_23696471_+ | SINE | Alu | AluJb |
CAediting_532469 | chr7_23696479_+ | SINE | Alu | AluJb |
CAediting_532470 | chr7_23696484_+ | SINE | Alu | AluJb |
CAediting_532471 | chr7_23696492_+ | SINE | Alu | AluJb |
CAediting_532472 | chr7_23696496_+ | SINE | Alu | AluJb |
CAediting_532473 | chr7_23696505_+ | SINE | Alu | AluJb |
CAediting_532474 | chr7_23696521_+ | SINE | Alu | AluJb |
CAediting_532475 | chr7_23696546_+ | SINE | Alu | AluJb |
CAediting_532476 | chr7_23696569_+ | SINE | Alu | AluJb |
CAediting_532477 | chr7_23697806_+ | SINE | Alu | AluJo |
CAediting_532478 | chr7_23697807_+ | SINE | Alu | AluJo |
CAediting_532479 | chr7_23697816_+ | SINE | Alu | AluJo |
CAediting_532480 | chr7_23697821_+ | SINE | Alu | AluJo |
CAediting_532481 | chr7_23697831_+ | SINE | Alu | AluJo |
CAediting_532482 | chr7_23697851_+ | SINE | Alu | AluJo |
CAediting_532483 | chr7_23697852_+ | SINE | Alu | AluJo |
CAediting_532484 | chr7_23697853_+ | SINE | Alu | AluJo |
CAediting_532485 | chr7_23697856_+ | SINE | Alu | AluJo |
CAediting_532486 | chr7_23697869_+ | SINE | Alu | AluJo |
CAediting_532487 | chr7_23697877_+ | SINE | Alu | AluJo |
CAediting_532488 | chr7_23697881_+ | SINE | Alu | AluJo |
CAediting_532489 | chr7_23697885_+ | SINE | Alu | AluJo |
CAediting_532490 | chr7_23697891_+ | SINE | Alu | AluJo |
CAediting_532491 | chr7_23697893_+ | SINE | Alu | AluJo |
CAediting_532492 | chr7_23697899_+ | SINE | Alu | AluJo |
CAediting_532493 | chr7_23697901_+ | SINE | Alu | AluJo |
CAediting_532494 | chr7_23697917_+ | SINE | Alu | AluJo |
CAediting_532495 | chr7_23697960_+ | SINE | Alu | AluJo |
CAediting_532496 | chr7_23697965_+ | SINE | Alu | AluJo |
CAediting_532497 | chr7_23697968_+ | SINE | Alu | AluJo |
CAediting_532498 | chr7_23697971_+ | SINE | Alu | AluJo |
CAediting_532499 | chr7_23697994_+ | SINE | Alu | AluJo |
CAediting_532500 | chr7_23697995_+ | SINE | Alu | AluJo |
CAediting_532501 | chr7_23697999_+ | SINE | Alu | AluJo |
CAediting_532502 | chr7_23698021_+ | SINE | Alu | AluJo |
CAediting_532503 | chr7_23698022_+ | SINE | Alu | AluJo |
CAediting_532504 | chr7_23698034_+ | SINE | Alu | AluJo |
CAediting_532505 | chr7_23698050_+ | SINE | Alu | AluJo |
CAediting_532506 | chr7_23699247_+ | SINE | Alu | AluJr4 |
CAediting_532507 | chr7_23699251_+ | SINE | Alu | AluJr4 |
CAediting_532508 | chr7_23699564_+ | SINE | Alu | AluJb |
CAediting_532509 | chr7_23699623_+ | SINE | Alu | AluJb |
CAediting_532510 | chr7_23699683_+ | SINE | Alu | AluJb |
CAediting_532511 | chr7_23699687_+ | SINE | Alu | AluJb |
CAediting_532512 | chr7_23699751_+ | SINE | Alu | AluJb |
CAediting_532513 | chr7_23699776_+ | SINE | Alu | AluJb |
CAediting_532514 | chr7_23699777_+ | SINE | Alu | AluJb |
CAediting_532515 | chr7_23699780_+ | SINE | Alu | AluJb |
CAediting_532516 | chr7_23699785_+ | SINE | Alu | AluJb |
CAediting_532517 | chr7_23701446_+ | SINE | Alu | AluY |
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RNA A-to-I editing events in the alternative splicing sites for FAM221A |
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AStype | CAeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
IR | CAediting_532487 | chr7_23697877_+ | 23697876:23697884 | 5SS | 2+0i | CAAGTAGGT | 7.33 | CGAGTAGGT | 5.76 |
IR | CAediting_532488 | chr7_23697881_+ | 23697876:23697884 | 5SS | 0+3i | CAAGTAGGT | 7.33 | CAAGTGGGT | 4.82 |
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Differntial gene expression between RNA A-to-I edited versus non-edited samples for FAM221A |
![]() * The grey color means N/A. |
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Protein coding region RNA A-to-I editings for FAM221A |
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The effects of the RNA editing to the miRNA binding sites for FAM221A |
**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page. |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
CAediting_1229414 | chr17_67471546_+ | ENSG00000188732.9 | ENST00000429719 | hsa-miR-548aa | 23687857 | 23687863 | 7mer-m8 | 23687840 | 23687864 | 140 | -15.09 |
CAediting_1229415 | chr17_67471547_+ | ENSG00000188732.9 | ENST00000429719 | hsa-miR-548aa | 23688470 | 23688476 | 7mer-m8 | 23688453 | 23688477 | 163 | -12.01 |
CAediting_1160181 | chr17_7017644_- | ENSG00000188732.9 | ENST00000429719 | hsa-miR-195-3p | 23688612 | 23688618 | 7mer-m8 | 23688598 | 23688619 | 151 | -15.61 |
CAediting_77128 | chr1_85133844_+ | ENSG00000188732.9 | ENST00000429719 | hsa-miR-4423-3p | 23688187 | 23688193 | 7mer-m8 | 23688174 | 23688194 | 145 | -16.18 |
CAediting_1399425 | chr20_1392958_- | ENSG00000188732.9 | ENST00000429719 | hsa-miR-6869-5p | 23686737 | 23686744 | 8mer-1a | 23686723 | 23686744 | 153 | -23.09 |
CAediting_228905 | chr2_188297554_+ | ENSG00000188732.9 | ENST00000429719 | hsa-miR-561-3p | 23687297 | 23687304 | 8mer-1a | 23687286 | 23687304 | 141 | -13.72 |
CAediting_580943 | chr7_100356700_+ | ENSG00000188732.9 | ENST00000429719 | hsa-miR-6840-3p | 23688133 | 23688139 | 7mer-m8 | 23688119 | 23688140 | 144 | -27.77 |
CAediting_1229415 | chr17_67471547_+ | ENSG00000188732.9 | ENST00000429719 | hsa-miR-548aa | 23689439 | 23689446 | 8mer-1a | 23689420 | 23689446 | 141 | -12.87 |
CAediting_1229413 | chr17_67471544_+ | ENSG00000188732.9 | ENST00000429719 | hsa-miR-548aa | 23691543 | 23691550 | 8mer-1a | 23691528 | 23691550 | 150 | -12.01 |
CAediting_1229415 | chr17_67471547_+ | ENSG00000188732.9 | ENST00000429719 | hsa-miR-548aa | 23700836 | 23700842 | 7mer-m8 | 23700819 | 23700843 | 159 | -12.98 |
CAediting_1229415 | chr17_67471547_+ | ENSG00000188732.9 | ENST00000446234 | hsa-miR-548aa | 23689439 | 23689446 | 8mer-1a | 23689420 | 23689446 | 141 | -12.87 |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
CAediting_573001 | chr7_92204086_- | ENSG00000188732.9 | ENST00000429719 | hsa-miR-1285-5p | 23686618 | 23686624 | 7mer-m8 | 23686605 | 23686625 | 155 | -17.97 |
CAediting_1160181 | chr17_7017644_- | ENSG00000188732.9 | ENST00000429719 | hsa-miR-195-3p | 23688367 | 23688374 | 8mer-1a | 23688353 | 23688374 | 142 | -6.67 |
CAediting_1160181 | chr17_7017644_- | ENSG00000188732.9 | ENST00000429719 | hsa-miR-195-3p | 23688481 | 23688488 | 8mer-1a | 23688467 | 23688488 | 140 | -7.18 |
CAediting_1306324 | chr19_13836464_- | ENSG00000188732.9 | ENST00000429719 | hsa-miR-27a-3p | 23688598 | 23688604 | 7mer-m8 | 23688585 | 23688605 | 153 | -12.48 |
CAediting_228905 | chr2_188297554_+ | ENSG00000188732.9 | ENST00000429719 | hsa-miR-561-3p | 23687992 | 23687998 | 7mer-m8 | 23687976 | 23687999 | 145 | -9.02 |
CAediting_228905 | chr2_188297554_+ | ENSG00000188732.9 | ENST00000429719 | hsa-miR-561-3p | 23686632 | 23686638 | 7mer-m8 | 23686612 | 23686639 | 149 | -9.9 |
CAediting_580943 | chr7_100356700_+ | ENSG00000188732.9 | ENST00000429719 | hsa-miR-6840-3p | 23687732 | 23687738 | 7mer-m8 | 23687718 | 23687739 | 140 | -22.98 |
CAediting_580943 | chr7_100356700_+ | ENSG00000188732.9 | ENST00000429719 | hsa-miR-6840-3p | 23688725 | 23688731 | 7mer-m8 | 23688707 | 23688732 | 143 | -23.34 |
CAediting_580943 | chr7_100356700_+ | ENSG00000188732.9 | ENST00000429719 | hsa-miR-6840-3p | 23686488 | 23686494 | 7mer-m8 | 23686474 | 23686495 | 148 | -21.42 |
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The effects of the RNA editing to the stability of the RNA structures for FAM221A |
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ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
ENST00000429719.4 | nonsense_mediated_decay | ![]() | ![]() |
ENST00000462546.4 | retained_intron | ![]() | ![]() |
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CAeditom_ID | ENST | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
CAediting_532422 | ENST00000429719.4 | chr7_23686364_+ | -1219.70 | -1217.90 | -1224.80 |
CAediting_532423 | ENST00000429719.4 | chr7_23686381_+ | -1218.00 | -1217.90 | -1224.80 |
CAediting_532424 | ENST00000429719.4 | chr7_23686390_+ | -1217.60 | -1217.90 | -1224.80 |
CAediting_532425 | ENST00000429719.4 | chr7_23686393_+ | -1218.40 | -1217.90 | -1224.80 |
CAediting_532426 | ENST00000429719.4 | chr7_23686403_+ | -1217.90 | -1217.90 | -1224.80 |
CAediting_532427 | ENST00000429719.4 | chr7_23686405_+ | -1218.70 | -1217.90 | -1224.80 |
CAediting_532428 | ENST00000462546.4 | chr7_23692442_+ | -1075.20 | -1074.70 | -1078.80 |
CAediting_532429 | ENST00000462546.4 | chr7_23692445_+ | -1074.40 | -1074.70 | -1078.80 |
CAediting_532430 | ENST00000462546.4 | chr7_23692515_+ | -1077.60 | -1074.70 | -1078.80 |
CAediting_532431 | ENST00000462546.4 | chr7_23692594_+ | -1075.70 | -1074.70 | -1078.80 |
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Relation with ADAR for FAM221A |
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Cancer | CAeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
STAD | CAediting_532484 | chr7_23697853_+ | . | . | 0.0309432513317003 | 0.288689405145434 | . | . |
BLCA | CAediting_532489 | chr7_23697885_+ | . | . | 0.0105258231444526 | 0.333474150468911 | . | . |
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Relation with cancer stages for FAM221A |
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Cancer | Stage_type | CAeditomID | position | P-val | Coeff. |
ESCA | clinical_stage | CAediting_532488 | chr7_23697881_+ | 0.0161840516476377 | -0.543427476144617 |
ESCA | pathologic_stage | CAediting_532481 | chr7_23697831_+ | 0.00884412847411059 | 0.33797511304551 |
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Relation with survival for FAM221A |
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Cancer | CAeditomID | position | KMpvalue | Coxpvalue | CoxHR |
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RelatedDrugs for FAM221A |
![]() (DrugBank Version 5.1.8 2021-01-03) |
Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for FAM221A |
![]() (DisGeNet 7.0) |
Gene | Disease ID | Disease name | # pubmeds | Source |