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Editing gene: ZC3H12D (CAeditome ID:340152)

Gene summary for ZC3H12D

Gene summary

Gene information	Gene symbol	ZC3H12D
	Gene ID	340152
	Gene name	zinc finger CCCH-type containing 12D
	Synonyms	C6orf95\|MCPIP4\|TFL\|dJ281H8.1\|p34
	Cytomap	6q25.1
	Type of gene	protein-coding
	Description	probable ribonuclease ZC3H12DZinc finger CCCH domain-containing protein 12Dtransformed follicular lymphomatumor suppressor TFL
	Modification date	20210518
	UniProtAcc	A2A288
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene	GO ID	GO term	PubMed ID
ZC3H12D	GO:0000932	Probable ribonuclease ZC3H12D	24415781
ZC3H12D	GO:0000932	Probable ribonuclease ZC3H12D	26134560
ZC3H12D	GO:0005654	Probable ribonuclease ZC3H12D	0000052
ZC3H12D	GO:0036464	Probable ribonuclease ZC3H12D	0000052

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RNA A-to-I events for ZC3H12D

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000178199.12

RNA A-to-I editing events in Cancer.

CAediting_509009(149447390, -), CAediting_509010(149448026, -), CAediting_509011(149448035, -), CAediting_509012(149448047, -), CAediting_509013(149448057, -), CAediting_509014(149448096, -), CAediting_509015(149448100, -), CAediting_509016(149448108, -), CAediting_509017(149448122, -), CAediting_509018(149448140, -), CAediting_509019(149448141, -), CAediting_509020(149448149, -), CAediting_509021(149448165, -), CAediting_509022(149448167, -), CAediting_509023(149448177, -), CAediting_509024(149448180, -), CAediting_509025(149448207, -), CAediting_509026(149448213, -), CAediting_509027(149448232, -), CAediting_509028(149448266, -), CAediting_509029(149448270, -), CAediting_509030(149448288, -), CAediting_509031(149448289, -), CAediting_509032(149448312, -), CAediting_509033(149448356, -), CAediting_509034(149448368, -), CAediting_509035(149448369, -), CAediting_509036(149448374, -), CAediting_509037(149448376, -), CAediting_509038(149448397, -), CAediting_509039(149448407, -), CAediting_509040(149448419, -), CAediting_509041(149448421, -), CAediting_509042(149448431, -), CAediting_509043(149448434, -), CAediting_509044(149448443, -), CAediting_509045(149448456, -), CAediting_509046(149448457, -), CAediting_509047(149448460, -), CAediting_509048(149448461, -), CAediting_509049(149448481, -), CAediting_509050(149448486, -), CAediting_509051(149448493, -), CAediting_509052(149448517, -), CAediting_509053(149449001, -), CAediting_509054(149449082, -), CAediting_509055(149449331, -), CAediting_509056(149449332, -), CAediting_509057(149449344, -), CAediting_509058(149449357, -), CAediting_509059(149449361, -), CAediting_509060(149449362, -), CAediting_509061(149449375, -), CAediting_509062(149449376, -), CAediting_509063(149449382, -), CAediting_509064(149449397, -), CAediting_509065(149449403, -), CAediting_509066(149449408, -), CAediting_509067(149449411, -), CAediting_509068(149449422, -), CAediting_509069(149449430, -), CAediting_509070(149449476, -), CAediting_509071(149449495, -), CAediting_509072(149449534, -), CAediting_509073(149449535, -), CAediting_509074(149449598, -), CAediting_509075(149449602, -), CAediting_509076(149449607, -), CAediting_509077(149449608, -), CAediting_509078(149449609, -), CAediting_509079(149449612, -), CAediting_509080(149449614, -), CAediting_509081(149449615, -), CAediting_509082(149449616, -), CAediting_509083(149449617, -), CAediting_509084(149449618, -), CAediting_509085(149449621, -), CAediting_509086(149449632, -), CAediting_509087(149449633, -), CAediting_509088(149449634, -), CAediting_509089(149449642, -), CAediting_509090(149449643, -), CAediting_509091(149449685, -), CAediting_509092(149449689, -), CAediting_509093(149449706, -), CAediting_509094(149449711, -), CAediting_509095(149449712, -), CAediting_509096(149449730, -), CAediting_509097(149453189, -), CAediting_509098(149458204, -), CAediting_509099(149458208, -), CAediting_509100(149458215, -), CAediting_509101(149458218, -), CAediting_509102(149458233, -), CAediting_509103(149458238, -), CAediting_509104(149458244, -), CAediting_509105(149458246, -), CAediting_509106(149458251, -), CAediting_509107(149458257, -), CAediting_509108(149458258, -), CAediting_509109(149458274, -), CAediting_509110(149458295, -), CAediting_509111(149458307, -), CAediting_509112(149458308, -), CAediting_509113(149458309, -), CAediting_509114(149458312, -), CAediting_509115(149458313, -), CAediting_509116(149458314, -), CAediting_509117(149458324, -), CAediting_509118(149458331, -), CAediting_509119(149458337, -), CAediting_509120(149458339, -), CAediting_509121(149458340, -), CAediting_509122(149458349, -), CAediting_509123(149458360, -), CAediting_509124(149458363, -), CAediting_509125(149458391, -), CAediting_509126(149458399, -), CAediting_509127(149458402, -), CAediting_509128(149458407, -), CAediting_509129(149458408, -), CAediting_509130(149458416, -), CAediting_509131(149460445, -), CAediting_509132(149460451, -), CAediting_509133(149460516, -), CAediting_509134(149460706, -), CAediting_509135(149460708, -), CAediting_509136(149460747, -), CAediting_509137(149461258, -), CAediting_509138(149465565, -), CAediting_509139(149479789, -), CAediting_509140(149479797, -),

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RNA editing positional annotations for ZC3H12D using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_509009	chr6_149447390_-	UTR3
CAediting_509010	chr6_149448026_-	ncRNA_exonic
CAediting_509011	chr6_149448035_-	ncRNA_exonic
CAediting_509012	chr6_149448047_-	ncRNA_splicing
CAediting_509013	chr6_149448057_-	ncRNA_intronic
CAediting_509014	chr6_149448096_-	ncRNA_intronic
CAediting_509015	chr6_149448100_-	ncRNA_intronic
CAediting_509016	chr6_149448108_-	ncRNA_intronic
CAediting_509017	chr6_149448122_-	ncRNA_intronic
CAediting_509018	chr6_149448140_-	ncRNA_intronic
CAediting_509019	chr6_149448141_-	ncRNA_intronic
CAediting_509020	chr6_149448149_-	ncRNA_intronic
CAediting_509021	chr6_149448165_-	ncRNA_intronic
CAediting_509022	chr6_149448167_-	ncRNA_intronic
CAediting_509023	chr6_149448177_-	ncRNA_intronic
CAediting_509024	chr6_149448180_-	ncRNA_intronic
CAediting_509025	chr6_149448207_-	ncRNA_intronic
CAediting_509026	chr6_149448213_-	ncRNA_intronic
CAediting_509027	chr6_149448232_-	ncRNA_intronic
CAediting_509028	chr6_149448266_-	ncRNA_intronic
CAediting_509029	chr6_149448270_-	ncRNA_intronic
CAediting_509030	chr6_149448288_-	ncRNA_intronic
CAediting_509031	chr6_149448289_-	ncRNA_intronic
CAediting_509032	chr6_149448312_-	ncRNA_intronic
CAediting_509033	chr6_149448356_-	ncRNA_intronic
CAediting_509034	chr6_149448368_-	ncRNA_intronic
CAediting_509035	chr6_149448369_-	ncRNA_intronic
CAediting_509036	chr6_149448374_-	ncRNA_intronic
CAediting_509037	chr6_149448376_-	ncRNA_intronic
CAediting_509038	chr6_149448397_-	ncRNA_intronic
CAediting_509039	chr6_149448407_-	ncRNA_intronic
CAediting_509040	chr6_149448419_-	ncRNA_intronic
CAediting_509041	chr6_149448421_-	ncRNA_intronic
CAediting_509042	chr6_149448431_-	ncRNA_intronic
CAediting_509043	chr6_149448434_-	ncRNA_exonic
CAediting_509044	chr6_149448443_-	ncRNA_exonic
CAediting_509045	chr6_149448456_-	ncRNA_exonic
CAediting_509046	chr6_149448457_-	ncRNA_exonic
CAediting_509047	chr6_149448460_-	ncRNA_exonic
CAediting_509048	chr6_149448461_-	ncRNA_exonic
CAediting_509049	chr6_149448481_-	ncRNA_exonic
CAediting_509050	chr6_149448486_-	ncRNA_exonic
CAediting_509051	chr6_149448493_-	ncRNA_exonic
CAediting_509052	chr6_149448517_-	ncRNA_exonic
CAediting_509053	chr6_149449001_-	ncRNA_exonic
CAediting_509054	chr6_149449082_-	ncRNA_exonic
CAediting_509055	chr6_149449331_-	ncRNA_exonic
CAediting_509056	chr6_149449332_-	ncRNA_exonic
CAediting_509057	chr6_149449344_-	ncRNA_exonic
CAediting_509058	chr6_149449357_-	ncRNA_exonic
CAediting_509059	chr6_149449361_-	ncRNA_exonic
CAediting_509060	chr6_149449362_-	ncRNA_exonic
CAediting_509061	chr6_149449375_-	ncRNA_exonic
CAediting_509062	chr6_149449376_-	ncRNA_exonic
CAediting_509063	chr6_149449382_-	UTR3
CAediting_509064	chr6_149449397_-	UTR3
CAediting_509065	chr6_149449403_-	UTR3
CAediting_509066	chr6_149449408_-	UTR3
CAediting_509067	chr6_149449411_-	UTR3
CAediting_509068	chr6_149449422_-	UTR3
CAediting_509069	chr6_149449430_-	UTR3
CAediting_509070	chr6_149449476_-	UTR3
CAediting_509071	chr6_149449495_-	UTR3
CAediting_509072	chr6_149449534_-	UTR3
CAediting_509073	chr6_149449535_-	UTR3
CAediting_509074	chr6_149449598_-	UTR3
CAediting_509075	chr6_149449602_-	UTR3
CAediting_509076	chr6_149449607_-	UTR3
CAediting_509077	chr6_149449608_-	UTR3
CAediting_509078	chr6_149449609_-	UTR3
CAediting_509079	chr6_149449612_-	UTR3
CAediting_509080	chr6_149449614_-	UTR3
CAediting_509081	chr6_149449615_-	UTR3
CAediting_509082	chr6_149449616_-	UTR3
CAediting_509083	chr6_149449617_-	UTR3
CAediting_509084	chr6_149449618_-	UTR3
CAediting_509085	chr6_149449621_-	UTR3
CAediting_509086	chr6_149449632_-	UTR3
CAediting_509087	chr6_149449633_-	UTR3
CAediting_509088	chr6_149449634_-	UTR3
CAediting_509089	chr6_149449642_-	UTR3
CAediting_509090	chr6_149449643_-	UTR3
CAediting_509091	chr6_149449685_-	UTR3
CAediting_509092	chr6_149449689_-	UTR3
CAediting_509093	chr6_149449706_-	UTR3
CAediting_509094	chr6_149449711_-	UTR3
CAediting_509095	chr6_149449712_-	UTR3
CAediting_509096	chr6_149449730_-	UTR3
CAediting_509097	chr6_149453189_-	intronic
CAediting_509098	chr6_149458204_-	intronic
CAediting_509099	chr6_149458208_-	intronic
CAediting_509100	chr6_149458215_-	intronic
CAediting_509101	chr6_149458218_-	intronic
CAediting_509102	chr6_149458233_-	intronic
CAediting_509103	chr6_149458238_-	intronic
CAediting_509104	chr6_149458244_-	intronic
CAediting_509105	chr6_149458246_-	intronic
CAediting_509106	chr6_149458251_-	intronic
CAediting_509107	chr6_149458257_-	intronic
CAediting_509108	chr6_149458258_-	intronic
CAediting_509109	chr6_149458274_-	intronic
CAediting_509110	chr6_149458295_-	intronic
CAediting_509111	chr6_149458307_-	intronic
CAediting_509112	chr6_149458308_-	intronic
CAediting_509113	chr6_149458309_-	intronic
CAediting_509114	chr6_149458312_-	intronic
CAediting_509115	chr6_149458313_-	intronic
CAediting_509116	chr6_149458314_-	intronic
CAediting_509117	chr6_149458324_-	intronic
CAediting_509118	chr6_149458331_-	intronic
CAediting_509119	chr6_149458337_-	intronic
CAediting_509120	chr6_149458339_-	intronic
CAediting_509121	chr6_149458340_-	intronic
CAediting_509122	chr6_149458349_-	intronic
CAediting_509123	chr6_149458360_-	intronic
CAediting_509124	chr6_149458363_-	intronic
CAediting_509125	chr6_149458391_-	intronic
CAediting_509126	chr6_149458399_-	intronic
CAediting_509127	chr6_149458402_-	intronic
CAediting_509128	chr6_149458407_-	intronic
CAediting_509129	chr6_149458408_-	intronic
CAediting_509130	chr6_149458416_-	intronic
CAediting_509131	chr6_149460445_-	intronic
CAediting_509132	chr6_149460451_-	intronic
CAediting_509133	chr6_149460516_-	intronic
CAediting_509134	chr6_149460706_-	intronic
CAediting_509135	chr6_149460708_-	intronic
CAediting_509136	chr6_149460747_-	intronic
CAediting_509137	chr6_149461258_-	intronic
CAediting_509138	chr6_149465565_-	ncRNA_intronic
CAediting_509139	chr6_149479789_-	ncRNA_intronic
CAediting_509140	chr6_149479797_-	ncRNA_intronic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_509009	chr6_149447390_-	SINE	Alu	AluSg
CAediting_509010	chr6_149448026_-	SINE	Alu	AluY
CAediting_509011	chr6_149448035_-	SINE	Alu	AluY
CAediting_509012	chr6_149448047_-	SINE	Alu	AluY
CAediting_509013	chr6_149448057_-	SINE	Alu	AluY
CAediting_509014	chr6_149448096_-	SINE	Alu	AluY
CAediting_509015	chr6_149448100_-	SINE	Alu	AluY
CAediting_509016	chr6_149448108_-	SINE	Alu	AluY
CAediting_509017	chr6_149448122_-	SINE	Alu	AluY
CAediting_509018	chr6_149448140_-	SINE	Alu	AluY
CAediting_509019	chr6_149448141_-	SINE	Alu	AluY
CAediting_509020	chr6_149448149_-	SINE	Alu	AluY
CAediting_509021	chr6_149448165_-	SINE	Alu	AluY
CAediting_509022	chr6_149448167_-	SINE	Alu	AluY
CAediting_509023	chr6_149448177_-	SINE	Alu	AluY
CAediting_509024	chr6_149448180_-	SINE	Alu	AluY
CAediting_509025	chr6_149448207_-	SINE	Alu	AluY
CAediting_509026	chr6_149448213_-	SINE	Alu	AluY
CAediting_509027	chr6_149448232_-	SINE	Alu	AluY
CAediting_509028	chr6_149448266_-	SINE	Alu	AluY
CAediting_509029	chr6_149448270_-	SINE	Alu	AluY
CAediting_509030	chr6_149448288_-	SINE	Alu	AluY
CAediting_509031	chr6_149448289_-	SINE	Alu	AluY
CAediting_509032	chr6_149448312_-	SINE	Alu	AluY
CAediting_509033	chr6_149448356_-	SINE	Alu	Alu
CAediting_509034	chr6_149448368_-	SINE	Alu	Alu
CAediting_509035	chr6_149448369_-	SINE	Alu	Alu
CAediting_509036	chr6_149448374_-	SINE	Alu	AluJb
CAediting_509037	chr6_149448376_-	SINE	Alu	AluJb
CAediting_509038	chr6_149448397_-	SINE	Alu	AluJb
CAediting_509039	chr6_149448407_-	SINE	Alu	AluJb
CAediting_509040	chr6_149448419_-	SINE	Alu	AluJb
CAediting_509041	chr6_149448421_-	SINE	Alu	AluJb
CAediting_509042	chr6_149448431_-	SINE	Alu	AluJb
CAediting_509043	chr6_149448434_-	SINE	Alu	AluJb
CAediting_509044	chr6_149448443_-	SINE	Alu	AluJb
CAediting_509045	chr6_149448456_-	SINE	Alu	AluJb
CAediting_509046	chr6_149448457_-	SINE	Alu	AluJb
CAediting_509047	chr6_149448460_-	SINE	Alu	AluJb
CAediting_509048	chr6_149448461_-	SINE	Alu	AluJb
CAediting_509049	chr6_149448481_-	SINE	Alu	AluJb
CAediting_509050	chr6_149448486_-	SINE	Alu	AluJb
CAediting_509051	chr6_149448493_-	SINE	Alu	AluJb
CAediting_509052	chr6_149448517_-	SINE	Alu	AluJb
CAediting_509055	chr6_149449331_-	SINE	Alu	AluJo
CAediting_509056	chr6_149449332_-	SINE	Alu	AluJo
CAediting_509057	chr6_149449344_-	SINE	Alu	AluJo
CAediting_509058	chr6_149449357_-	SINE	Alu	AluJo
CAediting_509059	chr6_149449361_-	SINE	Alu	AluJo
CAediting_509060	chr6_149449362_-	SINE	Alu	AluJo
CAediting_509061	chr6_149449375_-	SINE	Alu	AluJo
CAediting_509062	chr6_149449376_-	SINE	Alu	AluJo
CAediting_509063	chr6_149449382_-	SINE	Alu	AluJo
CAediting_509064	chr6_149449397_-	SINE	Alu	AluJo
CAediting_509065	chr6_149449403_-	SINE	Alu	AluJo
CAediting_509066	chr6_149449408_-	SINE	Alu	AluJo
CAediting_509067	chr6_149449411_-	SINE	Alu	AluJo
CAediting_509068	chr6_149449422_-	SINE	Alu	AluJo
CAediting_509069	chr6_149449430_-	SINE	Alu	AluJo
CAediting_509070	chr6_149449476_-	SINE	Alu	AluSz
CAediting_509071	chr6_149449495_-	SINE	Alu	AluSz
CAediting_509072	chr6_149449534_-	SINE	Alu	AluSz
CAediting_509073	chr6_149449535_-	SINE	Alu	AluSz
CAediting_509074	chr6_149449598_-	SINE	Alu	AluSz
CAediting_509075	chr6_149449602_-	SINE	Alu	AluSz
CAediting_509076	chr6_149449607_-	SINE	Alu	AluSz
CAediting_509077	chr6_149449608_-	SINE	Alu	AluSz
CAediting_509078	chr6_149449609_-	SINE	Alu	AluSz
CAediting_509079	chr6_149449612_-	SINE	Alu	AluSz
CAediting_509080	chr6_149449614_-	SINE	Alu	AluSz
CAediting_509081	chr6_149449615_-	SINE	Alu	AluSz
CAediting_509082	chr6_149449616_-	SINE	Alu	AluSz
CAediting_509083	chr6_149449617_-	SINE	Alu	AluSz
CAediting_509084	chr6_149449618_-	SINE	Alu	AluSz
CAediting_509085	chr6_149449621_-	SINE	Alu	AluSz
CAediting_509086	chr6_149449632_-	SINE	Alu	AluSz
CAediting_509087	chr6_149449633_-	SINE	Alu	AluSz
CAediting_509088	chr6_149449634_-	SINE	Alu	AluSz
CAediting_509089	chr6_149449642_-	SINE	Alu	AluSz
CAediting_509090	chr6_149449643_-	SINE	Alu	AluSz
CAediting_509091	chr6_149449685_-	SINE	Alu	AluSz
CAediting_509092	chr6_149449689_-	SINE	Alu	AluSz
CAediting_509093	chr6_149449706_-	SINE	Alu	AluSz
CAediting_509094	chr6_149449711_-	SINE	Alu	AluSz
CAediting_509095	chr6_149449712_-	SINE	Alu	AluSz
CAediting_509096	chr6_149449730_-	SINE	Alu	AluSz
CAediting_509097	chr6_149453189_-	SINE	Alu	AluJb
CAediting_509098	chr6_149458204_-	SINE	Alu	AluJb
CAediting_509099	chr6_149458208_-	SINE	Alu	AluJb
CAediting_509100	chr6_149458215_-	SINE	Alu	AluJb
CAediting_509101	chr6_149458218_-	SINE	Alu	AluJb
CAediting_509102	chr6_149458233_-	SINE	Alu	AluJb
CAediting_509103	chr6_149458238_-	SINE	Alu	AluJb
CAediting_509104	chr6_149458244_-	SINE	Alu	AluJb
CAediting_509105	chr6_149458246_-	SINE	Alu	AluJb
CAediting_509106	chr6_149458251_-	SINE	Alu	AluJb
CAediting_509107	chr6_149458257_-	SINE	Alu	AluJb
CAediting_509108	chr6_149458258_-	SINE	Alu	AluJb
CAediting_509109	chr6_149458274_-	SINE	Alu	AluJb
CAediting_509110	chr6_149458295_-	SINE	Alu	AluJb
CAediting_509111	chr6_149458307_-	SINE	Alu	AluJb
CAediting_509112	chr6_149458308_-	SINE	Alu	AluJb
CAediting_509113	chr6_149458309_-	SINE	Alu	AluJb
CAediting_509114	chr6_149458312_-	SINE	Alu	AluJb
CAediting_509115	chr6_149458313_-	SINE	Alu	AluJb
CAediting_509116	chr6_149458314_-	SINE	Alu	AluJb
CAediting_509117	chr6_149458324_-	SINE	Alu	AluJb
CAediting_509118	chr6_149458331_-	SINE	Alu	AluJb
CAediting_509119	chr6_149458337_-	SINE	Alu	AluJb
CAediting_509120	chr6_149458339_-	SINE	Alu	AluJb
CAediting_509121	chr6_149458340_-	SINE	Alu	AluJb
CAediting_509122	chr6_149458349_-	SINE	Alu	AluJb
CAediting_509123	chr6_149458360_-	SINE	Alu	AluJb
CAediting_509124	chr6_149458363_-	SINE	Alu	AluJb
CAediting_509125	chr6_149458391_-	SINE	Alu	AluJb
CAediting_509126	chr6_149458399_-	SINE	Alu	AluJb
CAediting_509127	chr6_149458402_-	SINE	Alu	AluJb
CAediting_509128	chr6_149458407_-	SINE	Alu	AluJb
CAediting_509129	chr6_149458408_-	SINE	Alu	AluJb
CAediting_509130	chr6_149458416_-	SINE	Alu	AluJb
CAediting_509131	chr6_149460445_-	SINE	Alu	AluJb
CAediting_509132	chr6_149460451_-	SINE	Alu	AluJb
CAediting_509133	chr6_149460516_-	SINE	Alu	AluJb
CAediting_509134	chr6_149460706_-	SINE	Alu	AluSq2
CAediting_509135	chr6_149460708_-	SINE	Alu	AluSq2
CAediting_509136	chr6_149460747_-	SINE	Alu	AluSq2
CAediting_509137	chr6_149461258_-	SINE	Alu	AluSc
CAediting_509138	chr6_149465565_-	SINE	Alu	AluSc8
CAediting_509139	chr6_149479789_-	SINE	Alu	FLAM_A
CAediting_509140	chr6_149479797_-	SINE	Alu	FLAM_A

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RNA A-to-I editing events in the alternative splicing sites for ZC3H12D

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000178199.12.ZC3H12D.

Correlation between RNA A-to-I editing and PSI for ENSG00000178199.12.ZC3H12D.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for ZC3H12D

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for ZC3H12D

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for ZC3H12D

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_509015	chr6_149448100_-	ENSG00000178199.12	ENST00000409806	hsa-miR-3190-5p	149448095	149448101	7mer-m8	149448094	149448112	152.00	-22.63
CAediting_509015	chr6_149448100_-	ENSG00000178199.12	ENST00000409806	hsa-miR-548s	149448096	149448102	7mer-m8	149448095	149448117	149.00	-12.68
CAediting_509034	chr6_149448368_-	ENSG00000178199.12	ENST00000409806	hsa-miR-3189-3p	149448367	149448373	7mer-m8	149448366	149448386	155.00	-19.11
CAediting_509034	chr6_149448368_-	ENSG00000178199.12	ENST00000409806	hsa-miR-614	149448363	149448369	7mer-m8	149448362	149448386	155.00	-15.76
CAediting_509047	chr6_149448460_-	ENSG00000178199.12	ENST00000409806	hsa-miR-1199-5p	149448460	149448466	7mer-m8	149448459	149448478	152.00	-24.78
CAediting_509047	chr6_149448460_-	ENSG00000178199.12	ENST00000409806	hsa-miR-6751-3p	149448460	149448466	7mer-m8	149448459	149448479	145.00	-13.99
CAediting_509053	chr6_149449001_-	ENSG00000178199.12	ENST00000409806	hsa-miR-3925-3p	149448998	149449004	7mer-m8	149448997	149449017	140.00	-11.27
CAediting_509059	chr6_149449361_-	ENSG00000178199.12	ENST00000409806	hsa-miR-3140-5p	149449360	149449366	7mer-m8	149449359	149449377	148.00	-15.69
CAediting_509059	chr6_149449361_-	ENSG00000178199.12	ENST00000409806	hsa-miR-3622a-3p	149449357	149449364	8mer-1a	149449357	149449377	143.00	-16.03
CAediting_509059	chr6_149449361_-	ENSG00000178199.12	ENST00000409806	hsa-miR-3622b-3p	149449357	149449364	8mer-1a	149449357	149449376	149.00	-18.70
CAediting_509059	chr6_149449361_-	ENSG00000178199.12	ENST00000409806	hsa-miR-4680-3p	149449361	149449366	6mer	149449360	149449379	143.00	-13.85
CAediting_509059	chr6_149449361_-	ENSG00000178199.12	ENST00000409806	hsa-miR-5187-3p	149449361	149449367	7mer-m8	149449360	149449380	145.00	-11.70
CAediting_509061	chr6_149449375_-	ENSG00000178199.12	ENST00000409806	hsa-miR-12119	149449374	149449380	7mer-m8	149449373	149449398	158.00	-19.70
CAediting_509061	chr6_149449375_-	ENSG00000178199.12	ENST00000409806	hsa-miR-1289	149449370	149449375	6mer	149449361	149449383	141.00	-24.88
CAediting_509061	chr6_149449375_-	ENSG00000178199.12	ENST00000409806	hsa-miR-1289	149449370	149449375	6mer	149449361	149449383	141.00	-24.88
CAediting_509061	chr6_149449375_-	ENSG00000178199.12	ENST00000409806	hsa-miR-4294	149449370	149449376	7mer-m8	149449369	149449388	145.00	-17.20
CAediting_509061	chr6_149449375_-	ENSG00000178199.12	ENST00000409806	hsa-miR-4649-3p	149449374	149449381	8mer-1a	149449374	149449393	146.00	-18.18
CAediting_509075	chr6_149449602_-	ENSG00000178199.12	ENST00000409806	hsa-miR-3190-5p	149449597	149449603	7mer-m8	149449596	149449615	143.00	-15.59
CAediting_509075	chr6_149449602_-	ENSG00000178199.12	ENST00000409806	hsa-miR-3926	149449598	149449605	8mer-1a	149449598	149449618	140.00	-12.16
CAediting_509075	chr6_149449602_-	ENSG00000178199.12	ENST00000409806	hsa-miR-3926	149449598	149449605	8mer-1a	149449598	149449618	140.00	-12.16
CAediting_509075	chr6_149449602_-	ENSG00000178199.12	ENST00000409806	hsa-miR-548s	149449598	149449604	7mer-m8	149449597	149449621	147.00	-12.28
CAediting_509093	chr6_149449706_-	ENSG00000178199.12	ENST00000409806	hsa-miR-371a-3p	149449701	149449707	7mer-m8	149449700	149449722	144.00	-15.05
CAediting_509094	chr6_149449711_-	ENSG00000178199.12	ENST00000409806	hsa-miR-8052	149449706	149449712	7mer-1a	149449706	149449724	148.00	-29.06
CAediting_509010	chr6_149448026_-	ENSG00000178199.12	ENST00000409806	hsa-miR-662	149448025	149448030	6mer	149448024	149448046	149.00	-30.52
CAediting_509010	chr6_149448026_-	ENSG00000178199.12	ENST00000409806	hsa-miR-663b	149448021	149448027	7mer-m8	149448020	149448042	147.00	-28.89
CAediting_509012	chr6_149448047_-	ENSG00000178199.12	ENST00000409806	hsa-miR-3189-3p	149448046	149448052	7mer-m8	149448045	149448067	153.00	-27.89
CAediting_509012	chr6_149448047_-	ENSG00000178199.12	ENST00000409806	hsa-miR-6813-3p	149448045	149448051	7mer-m8	149448044	149448064	140.00	-10.68
CAediting_509018	chr6_149448140_-	ENSG00000178199.12	ENST00000409806	hsa-miR-4429	149448136	149448141	6mer	149448135	149448155	141.00	-17.20
CAediting_509019	chr6_149448141_-	ENSG00000178199.12	ENST00000409806	hsa-miR-3157-5p	149448140	149448146	7mer-m8	149448139	149448161	151.00	-17.49
CAediting_509020	chr6_149448149_-	ENSG00000178199.12	ENST00000409806	hsa-miR-6863	149448146	149448152	7mer-m8	149448145	149448167	159.00	-27.09
CAediting_509022	chr6_149448167_-	ENSG00000178199.12	ENST00000409806	hsa-miR-17-3p	149448164	149448170	7mer-m8	149448163	149448185	158.00	-20.42
CAediting_509023	chr6_149448177_-	ENSG00000178199.12	ENST00000409806	hsa-miR-3614-5p	149448177	149448183	7mer-m8	149448176	149448199	152.00	-25.27
CAediting_509023	chr6_149448177_-	ENSG00000178199.12	ENST00000409806	hsa-miR-4691-3p	149448173	149448179	7mer-m8	149448172	149448199	150.00	-26.36
CAediting_509024	chr6_149448180_-	ENSG00000178199.12	ENST00000409806	hsa-miR-6852-5p	149448179	149448184	6mer	149448178	149448197	149.00	-26.62
CAediting_509026	chr6_149448213_-	ENSG00000178199.12	ENST00000409806	hsa-miR-1247-3p	149448211	149448217	7mer-m8	149448210	149448235	152.00	-23.82
CAediting_509029	chr6_149448270_-	ENSG00000178199.12	ENST00000409806	hsa-miR-1273c	149448269	149448274	6mer	149448268	149448289	148.00	-29.99
CAediting_509029	chr6_149448270_-	ENSG00000178199.12	ENST00000409806	hsa-miR-1285-3p	149448265	149448270	6mer	149448264	149448285	156.00	-31.39
CAediting_509029	chr6_149448270_-	ENSG00000178199.12	ENST00000409806	hsa-miR-1285-3p	149448265	149448270	6mer	149448264	149448285	156.00	-31.39
CAediting_509029	chr6_149448270_-	ENSG00000178199.12	ENST00000409806	hsa-miR-4486	149448265	149448271	7mer-m8	149448264	149448280	145.00	-18.64
CAediting_509031	chr6_149448289_-	ENSG00000178199.12	ENST00000409806	hsa-miR-340-3p	149448284	149448291	8mer-1a	149448284	149448303	149.00	-19.40
CAediting_509031	chr6_149448289_-	ENSG00000178199.12	ENST00000409806	hsa-miR-371b-5p	149448288	149448295	8mer-1a	149448288	149448308	146.00	-8.50
CAediting_509031	chr6_149448289_-	ENSG00000178199.12	ENST00000409806	hsa-miR-373-5p	149448288	149448295	8mer-1a	149448288	149448309	140.00	-8.35
CAediting_509031	chr6_149448289_-	ENSG00000178199.12	ENST00000409806	hsa-miR-616-5p	149448288	149448295	8mer-1a	149448288	149448308	141.00	-6.98
CAediting_509031	chr6_149448289_-	ENSG00000178199.12	ENST00000409806	hsa-miR-6827-3p	149448284	149448291	8mer-1a	149448284	149448304	140.00	-14.67
CAediting_509032	chr6_149448312_-	ENSG00000178199.12	ENST00000409806	hsa-miR-548ae-3p	149448306	149448313	8mer-1a	149448306	149448326	155.00	-5.62
CAediting_509032	chr6_149448312_-	ENSG00000178199.12	ENST00000409806	hsa-miR-548ae-3p	149448306	149448313	8mer-1a	149448306	149448326	155.00	-5.62
CAediting_509032	chr6_149448312_-	ENSG00000178199.12	ENST00000409806	hsa-miR-548ah-3p	149448306	149448313	8mer-1a	149448306	149448327	151.00	-5.83
CAediting_509032	chr6_149448312_-	ENSG00000178199.12	ENST00000409806	hsa-miR-548aj-3p	149448306	149448313	8mer-1a	149448306	149448326	155.00	-8.12
CAediting_509032	chr6_149448312_-	ENSG00000178199.12	ENST00000409806	hsa-miR-548aj-3p	149448306	149448313	8mer-1a	149448306	149448326	155.00	-8.12
CAediting_509032	chr6_149448312_-	ENSG00000178199.12	ENST00000409806	hsa-miR-548am-3p	149448306	149448313	8mer-1a	149448306	149448327	151.00	-5.83
CAediting_509032	chr6_149448312_-	ENSG00000178199.12	ENST00000409806	hsa-miR-548aq-3p	149448306	149448313	8mer-1a	149448306	149448327	155.00	-5.62
CAediting_509032	chr6_149448312_-	ENSG00000178199.12	ENST00000409806	hsa-miR-548j-3p	149448306	149448313	8mer-1a	149448306	149448326	150.00	-4.42
CAediting_509032	chr6_149448312_-	ENSG00000178199.12	ENST00000409806	hsa-miR-548x-3p	149448306	149448313	8mer-1a	149448306	149448325	155.00	-8.12
CAediting_509032	chr6_149448312_-	ENSG00000178199.12	ENST00000409806	hsa-miR-548x-3p	149448306	149448313	8mer-1a	149448306	149448325	155.00	-8.12
CAediting_509035	chr6_149448369_-	ENSG00000178199.12	ENST00000409806	hsa-miR-326	149448367	149448373	7mer-m8	149448366	149448385	151.00	-14.40
CAediting_509035	chr6_149448369_-	ENSG00000178199.12	ENST00000409806	hsa-miR-330-5p	149448367	149448373	7mer-m8	149448366	149448387	151.00	-17.46
CAediting_509037	chr6_149448376_-	ENSG00000178199.12	ENST00000409806	hsa-miR-600	149448376	149448381	6mer	149448375	149448397	143.00	-10.19
CAediting_509038	chr6_149448397_-	ENSG00000178199.12	ENST00000409806	hsa-miR-1207-3p	149448396	149448403	8mer-1a	149448396	149448413	144.00	-15.15
CAediting_509038	chr6_149448397_-	ENSG00000178199.12	ENST00000409806	hsa-miR-34a-3p	149448394	149448400	7mer-m8	149448393	149448414	140.00	-8.12
CAediting_509041	chr6_149448421_-	ENSG00000178199.12	ENST00000409806	hsa-miR-17-3p	149448418	149448424	7mer-m8	149448417	149448439	150.00	-18.96
CAediting_509041	chr6_149448421_-	ENSG00000178199.12	ENST00000409806	hsa-miR-4418	149448417	149448423	7mer-m8	149448416	149448432	154.00	-21.15
CAediting_509041	chr6_149448421_-	ENSG00000178199.12	ENST00000409806	hsa-miR-509-3-5p	149448417	149448423	7mer-m8	149448416	149448438	159.00	-17.42
CAediting_509041	chr6_149448421_-	ENSG00000178199.12	ENST00000409806	hsa-miR-509-5p	149448417	149448423	7mer-m8	149448416	149448435	145.00	-16.82
CAediting_509041	chr6_149448421_-	ENSG00000178199.12	ENST00000409806	hsa-miR-509-5p	149448417	149448423	7mer-m8	149448416	149448435	145.00	-16.82
CAediting_509042	chr6_149448431_-	ENSG00000178199.12	ENST00000409806	hsa-miR-4691-3p	149448427	149448433	7mer-m8	149448426	149448452	153.00	-28.71
CAediting_509043	chr6_149448434_-	ENSG00000178199.12	ENST00000409806	hsa-miR-6840-3p	149448433	149448439	7mer-m8	149448432	149448453	147.00	-21.69
CAediting_509045	chr6_149448456_-	ENSG00000178199.12	ENST00000409806	hsa-miR-1288-3p	149448453	149448459	7mer-m8	149448452	149448472	155.00	-23.57
CAediting_509045	chr6_149448456_-	ENSG00000178199.12	ENST00000409806	hsa-miR-3169	149448452	149448458	7mer-m8	149448451	149448476	148.00	-20.93
CAediting_509052	chr6_149448517_-	ENSG00000178199.12	ENST00000409806	hsa-miR-3940-3p	149448513	149448519	7mer-m8	149448512	149448533	152.00	-22.47
CAediting_509055	chr6_149449331_-	ENSG00000178199.12	ENST00000409806	hsa-miR-5690	149449328	149449334	7mer-m8	149449327	149449347	145.00	-17.72
CAediting_509056	chr6_149449332_-	ENSG00000178199.12	ENST00000409806	hsa-miR-4704-3p	149449328	149449334	7mer-m8	149449327	149449348	143.00	-15.08
CAediting_509056	chr6_149449332_-	ENSG00000178199.12	ENST00000409806	hsa-miR-668-3p	149449330	149449336	7mer-m8	149449329	149449351	146.00	-19.35
CAediting_509058	chr6_149449357_-	ENSG00000178199.12	ENST00000409806	hsa-miR-1255b-2-3p	149449356	149449362	7mer-m8	149449355	149449376	140.00	-11.13
CAediting_509058	chr6_149449357_-	ENSG00000178199.12	ENST00000409806	hsa-miR-3144-5p	149449352	149449358	7mer-m8	149449351	149449372	147.00	-20.17
CAediting_509068	chr6_149449422_-	ENSG00000178199.12	ENST00000409806	hsa-miR-1273c	149449421	149449426	6mer	149449420	149449441	144.00	-25.61
CAediting_509070	chr6_149449476_-	ENSG00000178199.12	ENST00000409806	hsa-miR-4632-3p	149449473	149449480	8mer-1a	149449473	149449492	141.00	-23.59
CAediting_509071	chr6_149449495_-	ENSG00000178199.12	ENST00000409806	hsa-miR-4304	149449495	149449501	7mer-m8	149449494	149449512	143.00	-17.25
CAediting_509072	chr6_149449534_-	ENSG00000178199.12	ENST00000409806	hsa-miR-3155a	149449530	149449536	7mer-m8	149449529	149449547	145.00	-24.35
CAediting_509072	chr6_149449534_-	ENSG00000178199.12	ENST00000409806	hsa-miR-3155b	149449530	149449536	7mer-m8	149449529	149449544	145.00	-23.45
CAediting_509072	chr6_149449534_-	ENSG00000178199.12	ENST00000409806	hsa-miR-484	149449530	149449536	7mer-m8	149449529	149449555	150.00	-24.63
CAediting_509073	chr6_149449535_-	ENSG00000178199.12	ENST00000409806	hsa-miR-9900	149449530	149449536	7mer-m8	149449529	149449548	155.00	-17.10
CAediting_509076	chr6_149449607_-	ENSG00000178199.12	ENST00000409806	hsa-miR-6844	149449606	149449612	7mer-m8	149449605	149449626	155.00	-7.49
CAediting_509077	chr6_149449608_-	ENSG00000178199.12	ENST00000409806	hsa-miR-578	149449606	149449612	7mer-m8	149449605	149449625	148.00	-9.14
CAediting_509077	chr6_149449608_-	ENSG00000178199.12	ENST00000409806	hsa-miR-643	149449607	149449614	8mer-1a	149449607	149449629	143.00	-14.77
CAediting_509078	chr6_149449609_-	ENSG00000178199.12	ENST00000409806	hsa-miR-4742-3p	149449608	149449615	8mer-1a	149449608	149449630	142.00	-10.99
CAediting_509079	chr6_149449612_-	ENSG00000178199.12	ENST00000409806	hsa-miR-3680-3p	149449607	149449614	8mer-1a	149449607	149449629	140.00	-13.99
CAediting_509079	chr6_149449612_-	ENSG00000178199.12	ENST00000409806	hsa-miR-3680-3p	149449607	149449614	8mer-1a	149449607	149449629	140.00	-13.99
CAediting_509082	chr6_149449616_-	ENSG00000178199.12	ENST00000409806	hsa-miR-630	149449610	149449617	8mer-1a	149449610	149449631	157.00	-16.15
CAediting_509083	chr6_149449617_-	ENSG00000178199.12	ENST00000409806	hsa-miR-325	149449616	149449623	8mer-1a	149449616	149449638	141.00	-12.77
CAediting_509084	chr6_149449618_-	ENSG00000178199.12	ENST00000409806	hsa-miR-222-5p	149449616	149449623	8mer-1a	149449616	149449639	146.00	-14.38
CAediting_509084	chr6_149449618_-	ENSG00000178199.12	ENST00000409806	hsa-miR-30a-3p	149449614	149449621	8mer-1a	149449614	149449638	150.00	-10.49
CAediting_509084	chr6_149449618_-	ENSG00000178199.12	ENST00000409806	hsa-miR-30d-3p	149449614	149449621	8mer-1a	149449614	149449639	147.00	-10.55
CAediting_509084	chr6_149449618_-	ENSG00000178199.12	ENST00000409806	hsa-miR-30e-3p	149449614	149449621	8mer-1a	149449614	149449638	150.00	-11.75
CAediting_509084	chr6_149449618_-	ENSG00000178199.12	ENST00000409806	hsa-miR-936	149449617	149449624	8mer-1a	149449617	149449639	159.00	-26.12
CAediting_509085	chr6_149449621_-	ENSG00000178199.12	ENST00000409806	hsa-miR-2467-3p	149449620	149449625	6mer	149449619	149449640	141.00	-23.27
CAediting_509085	chr6_149449621_-	ENSG00000178199.12	ENST00000409806	hsa-miR-374b-3p	149449616	149449623	8mer-1a	149449616	149449641	146.00	-14.59
CAediting_509086	chr6_149449632_-	ENSG00000178199.12	ENST00000409806	hsa-miR-3158-3p	149449628	149449634	7mer-m8	149449627	149449647	150.00	-20.06
CAediting_509086	chr6_149449632_-	ENSG00000178199.12	ENST00000409806	hsa-miR-3158-3p	149449628	149449634	7mer-m8	149449627	149449647	150.00	-20.06
CAediting_509086	chr6_149449632_-	ENSG00000178199.12	ENST00000409806	hsa-miR-412-3p	149449632	149449638	7mer-m8	149449631	149449653	153.00	-17.30
CAediting_509086	chr6_149449632_-	ENSG00000178199.12	ENST00000409806	hsa-miR-6754-3p	149449632	149449638	7mer-m8	149449631	149449651	144.00	-15.76
CAediting_509087	chr6_149449633_-	ENSG00000178199.12	ENST00000409806	hsa-miR-1182	149449628	149449634	7mer-m8	149449627	149449649	143.00	-14.91
CAediting_509087	chr6_149449633_-	ENSG00000178199.12	ENST00000409806	hsa-miR-1229-3p	149449632	149449638	7mer-m8	149449631	149449655	146.00	-16.14
CAediting_509087	chr6_149449633_-	ENSG00000178199.12	ENST00000409806	hsa-miR-6511a-3p	149449632	149449639	8mer-1a	149449632	149449653	145.00	-15.78
CAediting_509087	chr6_149449633_-	ENSG00000178199.12	ENST00000409806	hsa-miR-6511a-3p	149449632	149449639	8mer-1a	149449632	149449653	145.00	-15.78
CAediting_509087	chr6_149449633_-	ENSG00000178199.12	ENST00000409806	hsa-miR-6511a-3p	149449632	149449639	8mer-1a	149449632	149449653	145.00	-15.78
CAediting_509087	chr6_149449633_-	ENSG00000178199.12	ENST00000409806	hsa-miR-6511a-3p	149449632	149449639	8mer-1a	149449632	149449653	145.00	-15.78
CAediting_509087	chr6_149449633_-	ENSG00000178199.12	ENST00000409806	hsa-miR-6511b-3p	149449632	149449639	8mer-1a	149449632	149449654	140.00	-14.97
CAediting_509087	chr6_149449633_-	ENSG00000178199.12	ENST00000409806	hsa-miR-6511b-3p	149449632	149449639	8mer-1a	149449632	149449654	140.00	-14.97
CAediting_509088	chr6_149449634_-	ENSG00000178199.12	ENST00000409806	hsa-miR-23a-5p	149449629	149449635	7mer-m8	149449628	149449650	144.00	-18.50
CAediting_509088	chr6_149449634_-	ENSG00000178199.12	ENST00000409806	hsa-miR-23b-5p	149449629	149449635	7mer-m8	149449628	149449648	156.00	-20.46
CAediting_509089	chr6_149449642_-	ENSG00000178199.12	ENST00000409806	hsa-miR-3190-5p	149449642	149449648	7mer-m8	149449641	149449660	154.00	-19.64
CAediting_509091	chr6_149449685_-	ENSG00000178199.12	ENST00000409806	hsa-miR-4707-3p	149449681	149449688	8mer-1a	149449681	149449702	162.00	-27.37
CAediting_509092	chr6_149449689_-	ENSG00000178199.12	ENST00000409806	hsa-miR-1913	149449684	149449690	7mer-m8	149449683	149449704	144.00	-22.12
CAediting_509092	chr6_149449689_-	ENSG00000178199.12	ENST00000409806	hsa-miR-6849-3p	149449689	149449695	7mer-m8	149449688	149449706	143.00	-16.57
CAediting_509095	chr6_149449712_-	ENSG00000178199.12	ENST00000409806	hsa-miR-513a-5p	149449711	149449717	7mer-m8	149449710	149449727	152.00	-17.32
CAediting_509095	chr6_149449712_-	ENSG00000178199.12	ENST00000409806	hsa-miR-513a-5p	149449711	149449717	7mer-m8	149449710	149449727	152.00	-17.32
CAediting_509095	chr6_149449712_-	ENSG00000178199.12	ENST00000409806	hsa-miR-638	149449706	149449712	7mer-1a	149449706	149449730	155.00	-34.38
CAediting_509009	chr6_149447390_-	ENSG00000178199.12	ENST00000409806	hsa-miR-513a-5p	149447389	149447395	7mer-m8	149447388	149447403	145.00	-20.41
CAediting_509009	chr6_149447390_-	ENSG00000178199.12	ENST00000409806	hsa-miR-513a-5p	149447389	149447395	7mer-m8	149447388	149447403	145.00	-20.41
CAediting_509009	chr6_149447390_-	ENSG00000178199.12	ENST00000409806	hsa-miR-638	149447384	149447390	7mer-1a	149447384	149447408	147.00	-28.62
CAediting_509028	chr6_149448266_-	ENSG00000178199.12	ENST00000409806	hsa-miR-3940-3p	149448262	149448268	7mer-m8	149448261	149448282	151.00	-22.47

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_509094	chr6_149449711_-	ENSG00000178199.12	ENST00000409806	hsa-miR-10399-5p	149449710	149449716	7mer-m8	149449709	149449730	144	-10.26
CAediting_509095	chr6_149449712_-	ENSG00000178199.12	ENST00000409806	hsa-miR-10399-5p	149449710	149449716	7mer-m8	149449709	149449730	144	-10.26
CAediting_509040	chr6_149448419_-	ENSG00000178199.12	ENST00000409806	hsa-miR-1183	149448417	149448423	7mer-m8	149448416	149448448	142	-19.56
CAediting_509041	chr6_149448421_-	ENSG00000178199.12	ENST00000409806	hsa-miR-1183	149448417	149448423	7mer-m8	149448416	149448448	142	-19.56
CAediting_509024	chr6_149448180_-	ENSG00000178199.12	ENST00000409806	hsa-miR-12126	149448177	149448184	8mer-1a	149448177	149448200	147	-13.23
CAediting_509054	chr6_149449082_-	ENSG00000178199.12	ENST00000409806	hsa-miR-125a-5p	149449079	149449085	7mer-m8	149449078	149449101	140	-15.49
CAediting_509054	chr6_149449082_-	ENSG00000178199.12	ENST00000409806	hsa-miR-125b-5p	149449079	149449085	7mer-m8	149449078	149449099	140	-15.49
CAediting_509054	chr6_149449082_-	ENSG00000178199.12	ENST00000409806	hsa-miR-125b-5p	149449079	149449085	7mer-m8	149449078	149449099	140	-15.49
CAediting_509052	chr6_149448517_-	ENSG00000178199.12	ENST00000409806	hsa-miR-1262	149448517	149448523	7mer-m8	149448516	149448539	147	-18.74
CAediting_509028	chr6_149448266_-	ENSG00000178199.12	ENST00000409806	hsa-miR-1262	149448266	149448272	7mer-m8	149448265	149448286	140	-15.41
CAediting_509029	chr6_149448270_-	ENSG00000178199.12	ENST00000409806	hsa-miR-1262	149448266	149448272	7mer-m8	149448265	149448286	140	-15.41
CAediting_509043	chr6_149448434_-	ENSG00000178199.12	ENST00000409806	hsa-miR-1266-5p	149448433	149448438	6mer	149448432	149448456	148	-25.15
CAediting_509026	chr6_149448213_-	ENSG00000178199.12	ENST00000409806	hsa-miR-1273h-5p	149448213	149448219	7mer-m8	149448212	149448231	149	-24.29
CAediting_509030	chr6_149448288_-	ENSG00000178199.12	ENST00000409806	hsa-miR-1468-5p	149448284	149448290	7mer-m8	149448283	149448303	140	-13.02
CAediting_509031	chr6_149448289_-	ENSG00000178199.12	ENST00000409806	hsa-miR-1468-5p	149448284	149448290	7mer-m8	149448283	149448303	140	-13.02
CAediting_509063	chr6_149449382_-	ENSG00000178199.12	ENST00000409806	hsa-miR-17-3p	149449381	149449387	7mer-m8	149449380	149449401	150	-16.23
CAediting_509040	chr6_149448419_-	ENSG00000178199.12	ENST00000409806	hsa-miR-20b-3p	149448418	149448424	7mer-m8	149448417	149448439	153	-19.56
CAediting_509041	chr6_149448421_-	ENSG00000178199.12	ENST00000409806	hsa-miR-20b-3p	149448418	149448424	7mer-m8	149448417	149448439	153	-19.56
CAediting_509054	chr6_149449082_-	ENSG00000178199.12	ENST00000409806	hsa-miR-210-5p	149449077	149449083	7mer-m8	149449076	149449097	140	-15.61
CAediting_509014	chr6_149448096_-	ENSG00000178199.12	ENST00000409806	hsa-miR-3064-5p	149448095	149448100	6mer	149448094	149448114	144	-24.26
CAediting_509015	chr6_149448100_-	ENSG00000178199.12	ENST00000409806	hsa-miR-3064-5p	149448095	149448100	6mer	149448094	149448114	144	-24.26
CAediting_509026	chr6_149448213_-	ENSG00000178199.12	ENST00000409806	hsa-miR-30b-3p	149448213	149448219	7mer-m8	149448212	149448237	150	-21.96
CAediting_509049	chr6_149448481_-	ENSG00000178199.12	ENST00000409806	hsa-miR-320a-3p	149448476	149448482	7mer-m8	149448475	149448496	155	-15.57
CAediting_509049	chr6_149448481_-	ENSG00000178199.12	ENST00000409806	hsa-miR-320b	149448476	149448482	7mer-m8	149448475	149448496	155	-15.57
CAediting_509049	chr6_149448481_-	ENSG00000178199.12	ENST00000409806	hsa-miR-320b	149448476	149448482	7mer-m8	149448475	149448496	155	-15.57
CAediting_509049	chr6_149448481_-	ENSG00000178199.12	ENST00000409806	hsa-miR-320c	149448476	149448482	7mer-m8	149448475	149448494	155	-15.14
CAediting_509049	chr6_149448481_-	ENSG00000178199.12	ENST00000409806	hsa-miR-320c	149448476	149448482	7mer-m8	149448475	149448494	155	-15.14
CAediting_509049	chr6_149448481_-	ENSG00000178199.12	ENST00000409806	hsa-miR-320d	149448476	149448482	7mer-m8	149448475	149448493	155	-15.14
CAediting_509049	chr6_149448481_-	ENSG00000178199.12	ENST00000409806	hsa-miR-320d	149448476	149448482	7mer-m8	149448475	149448493	155	-15.14
CAediting_509053	chr6_149449001_-	ENSG00000178199.12	ENST00000409806	hsa-miR-3606-5p	149449001	149449007	7mer-m8	149449000	149449020	140	-12.09
CAediting_509059	chr6_149449361_-	ENSG00000178199.12	ENST00000409806	hsa-miR-3614-5p	149449357	149449363	7mer-1a	149449357	149449380	147	-18.23
CAediting_509060	chr6_149449362_-	ENSG00000178199.12	ENST00000409806	hsa-miR-3614-5p	149449357	149449363	7mer-1a	149449357	149449380	147	-18.23
CAediting_509043	chr6_149448434_-	ENSG00000178199.12	ENST00000409806	hsa-miR-3664-3p	149448433	149448439	7mer-m8	149448432	149448454	151	-17.82
CAediting_509069	chr6_149449430_-	ENSG00000178199.12	ENST00000409806	hsa-miR-3672	149449430	149449436	7mer-m8	149449429	149449450	151	-15.23
CAediting_509017	chr6_149448122_-	ENSG00000178199.12	ENST00000409806	hsa-miR-3675-3p	149448117	149448123	7mer-m8	149448116	149448137	145	-12.58
CAediting_509026	chr6_149448213_-	ENSG00000178199.12	ENST00000409806	hsa-miR-3689a-3p	149448213	149448219	7mer-m8	149448212	149448233	153	-27.52
CAediting_509026	chr6_149448213_-	ENSG00000178199.12	ENST00000409806	hsa-miR-3689b-3p	149448213	149448219	7mer-m8	149448212	149448235	150	-28.74
CAediting_509026	chr6_149448213_-	ENSG00000178199.12	ENST00000409806	hsa-miR-3689c	149448213	149448219	7mer-m8	149448212	149448235	150	-28.74
CAediting_509044	chr6_149448443_-	ENSG00000178199.12	ENST00000409806	hsa-miR-3929	149448439	149448445	7mer-m8	149448438	149448460	146	-17.45
CAediting_509013	chr6_149448057_-	ENSG00000178199.12	ENST00000409806	hsa-miR-3929	149448053	149448059	7mer-m8	149448052	149448072	154	-21.86
CAediting_509010	chr6_149448026_-	ENSG00000178199.12	ENST00000409806	hsa-miR-4284	149448022	149448029	8mer-1a	149448022	149448039	143	-15.61
CAediting_509054	chr6_149449082_-	ENSG00000178199.12	ENST00000409806	hsa-miR-4319	149449079	149449085	7mer-m8	149449078	149449094	142	-15.16
CAediting_509049	chr6_149448481_-	ENSG00000178199.12	ENST00000409806	hsa-miR-4429	149448476	149448482	7mer-m8	149448475	149448494	155	-15.14
CAediting_509090	chr6_149449643_-	ENSG00000178199.12	ENST00000409806	hsa-miR-4435	149449642	149449649	8mer-1a	149449642	149449662	146	-18.85
CAediting_509090	chr6_149449643_-	ENSG00000178199.12	ENST00000409806	hsa-miR-4435	149449642	149449649	8mer-1a	149449642	149449662	146	-18.85
CAediting_509057	chr6_149449344_-	ENSG00000178199.12	ENST00000409806	hsa-miR-4478	149449340	149449346	7mer-m8	149449339	149449355	151	-21.25
CAediting_509044	chr6_149448443_-	ENSG00000178199.12	ENST00000409806	hsa-miR-4478	149448439	149448445	7mer-m8	149448438	149448456	149	-23
CAediting_509013	chr6_149448057_-	ENSG00000178199.12	ENST00000409806	hsa-miR-4478	149448053	149448059	7mer-m8	149448052	149448068	155	-24.5
CAediting_509057	chr6_149449344_-	ENSG00000178199.12	ENST00000409806	hsa-miR-4649-3p	149449343	149449349	7mer-m8	149449342	149449362	140	-13.64
CAediting_509044	chr6_149448443_-	ENSG00000178199.12	ENST00000409806	hsa-miR-4649-3p	149448442	149448448	7mer-m8	149448441	149448461	140	-12.74
CAediting_509013	chr6_149448057_-	ENSG00000178199.12	ENST00000409806	hsa-miR-4649-3p	149448056	149448062	7mer-m8	149448055	149448075	145	-13.21
CAediting_509028	chr6_149448266_-	ENSG00000178199.12	ENST00000409806	hsa-miR-4701-3p	149448266	149448272	7mer-m8	149448265	149448285	153	-22.36
CAediting_509029	chr6_149448270_-	ENSG00000178199.12	ENST00000409806	hsa-miR-4701-3p	149448266	149448272	7mer-m8	149448265	149448285	153	-22.36
CAediting_509089	chr6_149449642_-	ENSG00000178199.12	ENST00000409806	hsa-miR-4716-5p	149449637	149449643	7mer-m8	149449636	149449657	140	-11.3
CAediting_509089	chr6_149449642_-	ENSG00000178199.12	ENST00000409806	hsa-miR-4781-3p	149449639	149449645	7mer-m8	149449638	149449656	144	-13.86
CAediting_509090	chr6_149449643_-	ENSG00000178199.12	ENST00000409806	hsa-miR-4781-3p	149449639	149449645	7mer-m8	149449638	149449656	144	-13.86
CAediting_509014	chr6_149448096_-	ENSG00000178199.12	ENST00000409806	hsa-miR-4793-5p	149448091	149448097	7mer-m8	149448090	149448113	154	-20.69
CAediting_509074	chr6_149449598_-	ENSG00000178199.12	ENST00000409806	hsa-miR-4794	149449597	149449603	7mer-m8	149449596	149449617	140	-12.3
CAediting_509075	chr6_149449602_-	ENSG00000178199.12	ENST00000409806	hsa-miR-4794	149449597	149449603	7mer-m8	149449596	149449617	140	-12.3
CAediting_509014	chr6_149448096_-	ENSG00000178199.12	ENST00000409806	hsa-miR-4794	149448095	149448101	7mer-m8	149448094	149448116	151	-21.79
CAediting_509015	chr6_149448100_-	ENSG00000178199.12	ENST00000409806	hsa-miR-4794	149448095	149448101	7mer-m8	149448094	149448116	151	-21.79
CAediting_509063	chr6_149449382_-	ENSG00000178199.12	ENST00000409806	hsa-miR-485-5p	149449376	149449383	8mer-1a	149449376	149449396	154	-17.39
CAediting_509057	chr6_149449344_-	ENSG00000178199.12	ENST00000409806	hsa-miR-485-5p	149449339	149449345	7mer-m8	149449338	149449360	145	-15.99
CAediting_509044	chr6_149448443_-	ENSG00000178199.12	ENST00000409806	hsa-miR-485-5p	149448438	149448444	7mer-m8	149448437	149448459	155	-16.87
CAediting_509013	chr6_149448057_-	ENSG00000178199.12	ENST00000409806	hsa-miR-485-5p	149448052	149448058	7mer-m8	149448051	149448074	153	-17.98
CAediting_509026	chr6_149448213_-	ENSG00000178199.12	ENST00000409806	hsa-miR-490-3p	149448209	149448215	7mer-m8	149448208	149448230	146	-16.73
CAediting_509093	chr6_149449706_-	ENSG00000178199.12	ENST00000409806	hsa-miR-5089-5p	149449706	149449712	7mer-m8	149449705	149449724	146	-13.24
CAediting_509094	chr6_149449711_-	ENSG00000178199.12	ENST00000409806	hsa-miR-5089-5p	149449706	149449712	7mer-m8	149449705	149449724	146	-13.24
CAediting_509093	chr6_149449706_-	ENSG00000178199.12	ENST00000409806	hsa-miR-512-3p	149449701	149449707	7mer-m8	149449700	149449721	149	-15
CAediting_509093	chr6_149449706_-	ENSG00000178199.12	ENST00000409806	hsa-miR-512-3p	149449701	149449707	7mer-m8	149449700	149449721	149	-15
CAediting_509045	chr6_149448456_-	ENSG00000178199.12	ENST00000409806	hsa-miR-541-5p	149448451	149448457	7mer-m8	149448450	149448471	147	-14.8
CAediting_509054	chr6_149449082_-	ENSG00000178199.12	ENST00000409806	hsa-miR-544b	149449080	149449086	7mer-m8	149449079	149449100	145	-15.62
CAediting_509018	chr6_149448140_-	ENSG00000178199.12	ENST00000409806	hsa-miR-548at-5p	149448136	149448142	7mer-m8	149448135	149448155	154	-12.92
CAediting_509019	chr6_149448141_-	ENSG00000178199.12	ENST00000409806	hsa-miR-548at-5p	149448136	149448142	7mer-m8	149448135	149448155	154	-12.92
CAediting_509042	chr6_149448431_-	ENSG00000178199.12	ENST00000409806	hsa-miR-5690	149448427	149448433	7mer-m8	149448426	149448446	145	-17.72
CAediting_509023	chr6_149448177_-	ENSG00000178199.12	ENST00000409806	hsa-miR-5690	149448173	149448179	7mer-m8	149448172	149448192	145	-16.74
CAediting_509071	chr6_149449495_-	ENSG00000178199.12	ENST00000409806	hsa-miR-5693	149449492	149449498	7mer-m8	149449491	149449511	154	-24.15
CAediting_509020	chr6_149448149_-	ENSG00000178199.12	ENST00000409806	hsa-miR-576-3p	149448146	149448152	7mer-m8	149448145	149448166	145	-17.48
CAediting_509070	chr6_149449476_-	ENSG00000178199.12	ENST00000409806	hsa-miR-6071	149449471	149449477	7mer-m8	149449470	149449490	152	-24.03
CAediting_509027	chr6_149448232_-	ENSG00000178199.12	ENST00000409806	hsa-miR-6073	149448230	149448237	8mer-1a	149448230	149448249	152	-16.35
CAediting_509009	chr6_149447390_-	ENSG00000178199.12	ENST00000409806	hsa-miR-6504-3p	149447388	149447394	7mer-m8	149447387	149447406	143	-11.06
CAediting_509093	chr6_149449706_-	ENSG00000178199.12	ENST00000409806	hsa-miR-6506-5p	149449705	149449711	7mer-m8	149449704	149449726	144	-16.21
CAediting_509052	chr6_149448517_-	ENSG00000178199.12	ENST00000409806	hsa-miR-661	149448514	149448520	7mer-m8	149448513	149448538	149	-23.8
CAediting_509028	chr6_149448266_-	ENSG00000178199.12	ENST00000409806	hsa-miR-661	149448263	149448269	7mer-m8	149448262	149448285	150	-22.37
CAediting_509074	chr6_149449598_-	ENSG00000178199.12	ENST00000409806	hsa-miR-664a-5p	149449597	149449603	7mer-m8	149449596	149449619	142	-14.39
CAediting_509075	chr6_149449602_-	ENSG00000178199.12	ENST00000409806	hsa-miR-664a-5p	149449597	149449603	7mer-m8	149449596	149449619	142	-14.39
CAediting_509014	chr6_149448096_-	ENSG00000178199.12	ENST00000409806	hsa-miR-664a-5p	149448095	149448101	7mer-m8	149448094	149448117	141	-15.05
CAediting_509015	chr6_149448100_-	ENSG00000178199.12	ENST00000409806	hsa-miR-664a-5p	149448095	149448101	7mer-m8	149448094	149448117	141	-15.05
CAediting_509021	chr6_149448165_-	ENSG00000178199.12	ENST00000409806	hsa-miR-6720-3p	149448160	149448166	7mer-m8	149448159	149448180	152	-20.67
CAediting_509052	chr6_149448517_-	ENSG00000178199.12	ENST00000409806	hsa-miR-6736-5p	149448517	149448523	7mer-m8	149448516	149448535	144	-18.98
CAediting_509028	chr6_149448266_-	ENSG00000178199.12	ENST00000409806	hsa-miR-6736-5p	149448266	149448272	7mer-m8	149448265	149448285	143	-20.47
CAediting_509029	chr6_149448270_-	ENSG00000178199.12	ENST00000409806	hsa-miR-6736-5p	149448266	149448272	7mer-m8	149448265	149448285	143	-20.47
CAediting_509052	chr6_149448517_-	ENSG00000178199.12	ENST00000409806	hsa-miR-6742-3p	149448515	149448521	7mer-m8	149448514	149448533	140	-13.49
CAediting_509028	chr6_149448266_-	ENSG00000178199.12	ENST00000409806	hsa-miR-6742-3p	149448264	149448270	7mer-m8	149448263	149448282	140	-13.49
CAediting_509091	chr6_149449685_-	ENSG00000178199.12	ENST00000409806	hsa-miR-6747-3p	149449683	149449689	7mer-m8	149449682	149449702	148	-21.17
CAediting_509052	chr6_149448517_-	ENSG00000178199.12	ENST00000409806	hsa-miR-6776-5p	149448516	149448522	7mer-m8	149448515	149448535	151	-24.36
CAediting_509051	chr6_149448493_-	ENSG00000178199.12	ENST00000409806	hsa-miR-6779-3p	149448488	149448494	7mer-m8	149448487	149448507	143	-13.9
CAediting_509026	chr6_149448213_-	ENSG00000178199.12	ENST00000409806	hsa-miR-6779-5p	149448213	149448219	7mer-m8	149448212	149448233	154	-25.72
CAediting_509026	chr6_149448213_-	ENSG00000178199.12	ENST00000409806	hsa-miR-6780a-5p	149448213	149448219	7mer-m8	149448212	149448235	148	-26.74
CAediting_509086	chr6_149449632_-	ENSG00000178199.12	ENST00000409806	hsa-miR-6823-5p	149449627	149449633	7mer-m8	149449626	149449646	143	-17.07
CAediting_509085	chr6_149449621_-	ENSG00000178199.12	ENST00000409806	hsa-miR-6832-5p	149449620	149449626	7mer-m8	149449619	149449641	140	-18.87
CAediting_509069	chr6_149449430_-	ENSG00000178199.12	ENST00000409806	hsa-miR-6864-3p	149449430	149449436	7mer-m8	149449429	149449448	152	-15.76
CAediting_509096	chr6_149449730_-	ENSG00000178199.12	ENST00000409806	hsa-miR-6872-3p	149449727	149449733	7mer-m8	149449726	149449744	144	-20.35
CAediting_509063	chr6_149449382_-	ENSG00000178199.12	ENST00000409806	hsa-miR-6884-5p	149449376	149449383	8mer-1a	149449376	149449398	154	-22.04
CAediting_509044	chr6_149448443_-	ENSG00000178199.12	ENST00000409806	hsa-miR-6884-5p	149448438	149448444	7mer-m8	149448437	149448460	153	-22.68
CAediting_509095	chr6_149449712_-	ENSG00000178199.12	ENST00000409806	hsa-miR-7151-3p	149449711	149449718	8mer-1a	149449711	149449727	146	-17.62
CAediting_509057	chr6_149449344_-	ENSG00000178199.12	ENST00000409806	hsa-miR-7160-5p	149449342	149449348	7mer-m8	149449341	149449361	150	-19.12
CAediting_509044	chr6_149448443_-	ENSG00000178199.12	ENST00000409806	hsa-miR-7160-5p	149448441	149448447	7mer-m8	149448440	149448460	151	-21.49
CAediting_509013	chr6_149448057_-	ENSG00000178199.12	ENST00000409806	hsa-miR-7160-5p	149448055	149448061	7mer-m8	149448054	149448073	150	-19.96
CAediting_509051	chr6_149448493_-	ENSG00000178199.12	ENST00000409806	hsa-miR-7976	149448489	149448495	7mer-m8	149448488	149448509	151	-19.69
CAediting_509024	chr6_149448180_-	ENSG00000178199.12	ENST00000409806	hsa-miR-887-5p	149448180	149448186	7mer-m8	149448179	149448198	143	-19.73
CAediting_509053	chr6_149449001_-	ENSG00000178199.12	ENST00000409806	hsa-miR-921	149449001	149449006	6mer	149449000	149449024	143	-18.3
CAediting_509027	chr6_149448232_-	ENSG00000178199.12	ENST00000409806	hsa-miR-921	149448232	149448238	7mer-m8	149448231	149448254	145	-16.72
CAediting_509055	chr6_149449331_-	ENSG00000178199.12	ENST00000409806	hsa-miR-935	149449328	149449334	7mer-m8	149449327	149449349	140	-16.12
CAediting_509056	chr6_149449332_-	ENSG00000178199.12	ENST00000409806	hsa-miR-935	149449328	149449334	7mer-m8	149449327	149449349	140	-16.12

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_980496	chr14_31014685_-	ENSG00000178199.12	ENST00000409806	hsa-miR-624-3p	149449626	149449632	7mer-m8	149449625	149449645	152	-13.11
CAediting_980496	chr14_31014685_-	ENSG00000178199.12	ENST00000409806	hsa-miR-624-3p	149447441	149447447	7mer-m8	149447440	149447460	147	-15.33
CAediting_980496	chr14_31014685_-	ENSG00000178199.12	ENST00000409806	hsa-miR-624-3p	149450317	149450323	7mer-m8	149450316	149450336	140	-19.59
CAediting_748296	chr10_51299626_+	ENSG00000178199.12	ENST00000458251	hsa-miR-605-3p	149452492	149452498	7mer-m8	149452491	149452512	140	-14.19
CAediting_1229415	chr17_67471547_+	ENSG00000178199.12	ENST00000409806	hsa-miR-548aa	149447579	149447585	7mer-m8	149447578	149447602	140	-8.03
CAediting_86358	chr1_109598906_+	ENSG00000178199.12	ENST00000409806	hsa-miR-197-5p	149449049	149449056	8mer-1a	149449049	149449071	154	-32.02
CAediting_86358	chr1_109598906_+	ENSG00000178199.12	ENST00000409806	hsa-miR-197-5p	149450459	149450466	8mer-1a	149450459	149450484	143	-24.41
CAediting_228905	chr2_188297554_+	ENSG00000178199.12	ENST00000409806	hsa-miR-561-3p	149450293	149450298	6mer	149450292	149450315	142	-14.16
CAediting_442554	chr5_154685830_+	ENSG00000178199.12	ENST00000409806	hsa-miR-1303	149449852	149449858	7mer-m8	149449851	149449872	140	-14.83
CAediting_604450	chr7_133034877_-	ENSG00000178199.12	ENST00000409806	hsa-miR-3654	149448399	149448405	7mer-m8	149448398	149448416	146	-14.61
CAediting_524911	chr7_5495852_-	ENSG00000178199.12	ENST00000409806	hsa-miR-589-3p	149449164	149449170	7mer-m8	149449163	149449186	154	-20.21
CAediting_524911	chr7_5495852_-	ENSG00000178199.12	ENST00000409806	hsa-miR-589-3p	149450052	149450059	8mer-1a	149450052	149450075	158	-20.47
CAediting_1368054	chr19_46709310_-	ENSG00000178199.12	ENST00000458251	hsa-miR-320e	149452167	149452173	7mer-m8	149452166	149452183	150	-24.91

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_846604	chr11_93733708_-	ENSG00000178199.12	ENST00000409806	hsa-miR-1304-3p	149447322	149447327	6mer	149447321	149447342	151	-28.01
CAediting_846604	chr11_93733708_-	ENSG00000178199.12	ENST00000409806	hsa-miR-1304-3p	149447133	149447139	7mer-m8	149447132	149447155	153	-19.2
CAediting_1306324	chr19_13836464_-	ENSG00000178199.12	ENST00000409806	hsa-miR-27a-3p	149447811	149447818	8mer-1a	149447811	149447832	155	-17.03
CAediting_524911	chr7_5495852_-	ENSG00000178199.12	ENST00000409806	hsa-miR-589-3p	149447558	149447564	7mer-m8	149447557	149447578	147	-15.79
CAediting_748296	chr10_51299626_+	ENSG00000178199.12	ENST00000409806	hsa-miR-605-3p	149449783	149449789	7mer-m8	149449782	149449802	143	-14.99
CAediting_980496	chr14_31014685_-	ENSG00000178199.12	ENST00000409806	hsa-miR-624-3p	149448070	149448076	7mer-m8	149448069	149448089	145	-16.44
CAediting_1351755	chr19_40282625_-	ENSG00000178199.12	ENST00000409806	hsa-miR-641	149447722	149447728	7mer-m8	149447721	149447745	153	-12.47
CAediting_1054808	chr15_66496985_-	ENSG00000178199.12	ENST00000458251	hsa-miR-4512	149452586	149452592	7mer-m8	149452585	149452607	141	-25.02

Differentially expressed gene-miRNA network

Top

The effects of the RNA editing to the stability of the RNA structures for ZC3H12D

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST	ENST type	RNA structure without RNA A-to-I editing.	RNA structure with RNA A-to-I editing.
ENST00000409806.6	protein_coding
ENST00000498662.1	processed_transcript

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID	ENST	Editing_Position	MFE_withoneAI	MFE_withoutAI	MFE_withmultipleAI
CAediting_509009	ENST00000409806.6	chr6_149447390_-	-2601.20	-2601.50	-2666.60
CAediting_509010	ENST00000409806.6	chr6_149448026_-	-2600.60	-2601.50	-2666.60
CAediting_509011	ENST00000409806.6	chr6_149448035_-	-2598.50	-2601.50	-2666.60
CAediting_509012	ENST00000409806.6	chr6_149448047_-	-2601.20	-2601.50	-2666.60
CAediting_509013	ENST00000409806.6	chr6_149448057_-	-2601.50	-2601.50	-2666.60
CAediting_509014	ENST00000409806.6	chr6_149448096_-	-2600.80	-2601.50	-2666.60
CAediting_509015	ENST00000409806.6	chr6_149448100_-	-2607.00	-2601.50	-2666.60
CAediting_509016	ENST00000409806.6	chr6_149448108_-	-2601.10	-2601.50	-2666.60
CAediting_509017	ENST00000409806.6	chr6_149448122_-	-2601.20	-2601.50	-2666.60
CAediting_509018	ENST00000409806.6	chr6_149448140_-	-2601.50	-2601.50	-2666.60
CAediting_509019	ENST00000409806.6	chr6_149448141_-	-2601.60	-2601.50	-2666.60
CAediting_509020	ENST00000409806.6	chr6_149448149_-	-2602.50	-2601.50	-2666.60
CAediting_509021	ENST00000409806.6	chr6_149448165_-	-2600.80	-2601.50	-2666.60
CAediting_509022	ENST00000409806.6	chr6_149448167_-	-2601.50	-2601.50	-2666.60
CAediting_509023	ENST00000409806.6	chr6_149448177_-	-2600.10	-2601.50	-2666.60
CAediting_509024	ENST00000409806.6	chr6_149448180_-	-2601.40	-2601.50	-2666.60
CAediting_509025	ENST00000409806.6	chr6_149448207_-	-2601.00	-2601.50	-2666.60
CAediting_509026	ENST00000409806.6	chr6_149448213_-	-2605.40	-2601.50	-2666.60
CAediting_509027	ENST00000409806.6	chr6_149448232_-	-2601.50	-2601.50	-2666.60
CAediting_509028	ENST00000409806.6	chr6_149448266_-	-2600.80	-2601.50	-2666.60
CAediting_509029	ENST00000409806.6	chr6_149448270_-	-2606.90	-2601.50	-2666.60
CAediting_509030	ENST00000409806.6	chr6_149448288_-	-2601.80	-2601.50	-2666.60
CAediting_509031	ENST00000409806.6	chr6_149448289_-	-2607.90	-2601.50	-2666.60
CAediting_509032	ENST00000409806.6	chr6_149448312_-	-2601.50	-2601.50	-2666.60
CAediting_509033	ENST00000409806.6	chr6_149448356_-	-2601.50	-2601.50	-2666.60
CAediting_509034	ENST00000409806.6	chr6_149448368_-	-2601.20	-2601.50	-2666.60
CAediting_509035	ENST00000409806.6	chr6_149448369_-	-2601.60	-2601.50	-2666.60
CAediting_509036	ENST00000409806.6	chr6_149448374_-	-2602.30	-2601.50	-2666.60
CAediting_509037	ENST00000409806.6	chr6_149448376_-	-2601.50	-2601.50	-2666.60
CAediting_509038	ENST00000409806.6	chr6_149448397_-	-2601.60	-2601.50	-2666.60
CAediting_509039	ENST00000409806.6	chr6_149448407_-	-2601.50	-2601.50	-2666.60
CAediting_509040	ENST00000409806.6	chr6_149448419_-	-2601.50	-2601.50	-2666.60
CAediting_509041	ENST00000409806.6	chr6_149448421_-	-2601.50	-2601.50	-2666.60
CAediting_509042	ENST00000409806.6	chr6_149448431_-	-2601.20	-2601.50	-2666.60
CAediting_509043	ENST00000409806.6	chr6_149448434_-	-2600.60	-2601.50	-2666.60
CAediting_509044	ENST00000409806.6	chr6_149448443_-	-2600.80	-2601.50	-2666.60
CAediting_509045	ENST00000409806.6	chr6_149448456_-	-2601.30	-2601.50	-2666.60
CAediting_509046	ENST00000409806.6	chr6_149448457_-	-2605.70	-2601.50	-2666.60
CAediting_509047	ENST00000409806.6	chr6_149448460_-	-2601.20	-2601.50	-2666.60
CAediting_509048	ENST00000409806.6	chr6_149448461_-	-2601.20	-2601.50	-2666.60
CAediting_509049	ENST00000409806.6	chr6_149448481_-	-2600.70	-2601.50	-2666.60
CAediting_509050	ENST00000409806.6	chr6_149448486_-	-2601.10	-2601.50	-2666.60
CAediting_509051	ENST00000409806.6	chr6_149448493_-	-2601.20	-2601.50	-2666.60
CAediting_509052	ENST00000409806.6	chr6_149448517_-	-2602.10	-2601.50	-2666.60
CAediting_509053	ENST00000409806.6	chr6_149449001_-	-2608.10	-2601.50	-2666.60
CAediting_509054	ENST00000409806.6	chr6_149449082_-	-2607.70	-2601.50	-2666.60
CAediting_509055	ENST00000409806.6	chr6_149449331_-	-2601.50	-2601.50	-2666.60
CAediting_509056	ENST00000409806.6	chr6_149449332_-	-2601.90	-2601.50	-2666.60
CAediting_509057	ENST00000409806.6	chr6_149449344_-	-2601.70	-2601.50	-2666.60
CAediting_509058	ENST00000409806.6	chr6_149449357_-	-2604.10	-2601.50	-2666.60
CAediting_509059	ENST00000409806.6	chr6_149449361_-	-2603.60	-2601.50	-2666.60
CAediting_509060	ENST00000409806.6	chr6_149449362_-	-2605.40	-2601.50	-2666.60
CAediting_509061	ENST00000409806.6	chr6_149449375_-	-2603.70	-2601.50	-2666.60
CAediting_509062	ENST00000409806.6	chr6_149449376_-	-2601.50	-2601.50	-2666.60
CAediting_509063	ENST00000409806.6	chr6_149449382_-	-2602.50	-2601.50	-2666.60
CAediting_509064	ENST00000409806.6	chr6_149449397_-	-2603.00	-2601.50	-2666.60
CAediting_509065	ENST00000409806.6	chr6_149449403_-	-2605.30	-2601.50	-2666.60
CAediting_509066	ENST00000409806.6	chr6_149449408_-	-2605.20	-2601.50	-2666.60
CAediting_509067	ENST00000409806.6	chr6_149449411_-	-2603.50	-2601.50	-2666.60
CAediting_509068	ENST00000409806.6	chr6_149449422_-	-2602.70	-2601.50	-2666.60
CAediting_509069	ENST00000409806.6	chr6_149449430_-	-2606.90	-2601.50	-2666.60
CAediting_509070	ENST00000409806.6	chr6_149449476_-	-2603.50	-2601.50	-2666.60
CAediting_509071	ENST00000409806.6	chr6_149449495_-	-2601.10	-2601.50	-2666.60
CAediting_509072	ENST00000409806.6	chr6_149449534_-	-2608.20	-2601.50	-2666.60
CAediting_509073	ENST00000409806.6	chr6_149449535_-	-2600.60	-2601.50	-2666.60
CAediting_509074	ENST00000409806.6	chr6_149449598_-	-2605.40	-2601.50	-2666.60
CAediting_509075	ENST00000409806.6	chr6_149449602_-	-2601.20	-2601.50	-2666.60
CAediting_509076	ENST00000409806.6	chr6_149449607_-	-2601.60	-2601.50	-2666.60
CAediting_509077	ENST00000409806.6	chr6_149449608_-	-2601.60	-2601.50	-2666.60
CAediting_509078	ENST00000409806.6	chr6_149449609_-	-2601.60	-2601.50	-2666.60
CAediting_509079	ENST00000409806.6	chr6_149449612_-	-2601.20	-2601.50	-2666.60
CAediting_509080	ENST00000409806.6	chr6_149449614_-	-2601.50	-2601.50	-2666.60
CAediting_509081	ENST00000409806.6	chr6_149449615_-	-2601.60	-2601.50	-2666.60
CAediting_509082	ENST00000409806.6	chr6_149449616_-	-2601.60	-2601.50	-2666.60
CAediting_509083	ENST00000409806.6	chr6_149449617_-	-2601.60	-2601.50	-2666.60
CAediting_509084	ENST00000409806.6	chr6_149449618_-	-2602.00	-2601.50	-2666.60
CAediting_509085	ENST00000409806.6	chr6_149449621_-	-2603.10	-2601.50	-2666.60
CAediting_509086	ENST00000409806.6	chr6_149449632_-	-2601.50	-2601.50	-2666.60
CAediting_509087	ENST00000409806.6	chr6_149449633_-	-2602.50	-2601.50	-2666.60
CAediting_509088	ENST00000409806.6	chr6_149449634_-	-2600.60	-2601.50	-2666.60
CAediting_509089	ENST00000409806.6	chr6_149449642_-	-2601.90	-2601.50	-2666.60
CAediting_509090	ENST00000409806.6	chr6_149449643_-	-2602.80	-2601.50	-2666.60
CAediting_509091	ENST00000409806.6	chr6_149449685_-	-2600.80	-2601.50	-2666.60
CAediting_509092	ENST00000409806.6	chr6_149449689_-	-2600.60	-2601.50	-2666.60
CAediting_509093	ENST00000409806.6	chr6_149449706_-	-2600.70	-2601.50	-2666.60
CAediting_509094	ENST00000409806.6	chr6_149449711_-	-2601.50	-2601.50	-2666.60
CAediting_509095	ENST00000409806.6	chr6_149449712_-	-2601.60	-2601.50	-2666.60
CAediting_509096	ENST00000409806.6	chr6_149449730_-	-2602.20	-2601.50	-2666.60
CAediting_509010	ENST00000498662.1	chr6_149448026_-	-445.80	-441.70	-472.90
CAediting_509011	ENST00000498662.1	chr6_149448035_-	-442.70	-441.70	-472.90
CAediting_509043	ENST00000498662.1	chr6_149448434_-	-445.60	-441.70	-472.90
CAediting_509044	ENST00000498662.1	chr6_149448443_-	-443.00	-441.70	-472.90
CAediting_509045	ENST00000498662.1	chr6_149448456_-	-441.70	-441.70	-472.90
CAediting_509046	ENST00000498662.1	chr6_149448457_-	-441.70	-441.70	-472.90
CAediting_509047	ENST00000498662.1	chr6_149448460_-	-445.20	-441.70	-472.90
CAediting_509048	ENST00000498662.1	chr6_149448461_-	-441.40	-441.70	-472.90
CAediting_509049	ENST00000498662.1	chr6_149448481_-	-441.00	-441.70	-472.90
CAediting_509050	ENST00000498662.1	chr6_149448486_-	-441.70	-441.70	-472.90
CAediting_509051	ENST00000498662.1	chr6_149448493_-	-441.60	-441.70	-472.90
CAediting_509052	ENST00000498662.1	chr6_149448517_-	-445.10	-441.70	-472.90
CAediting_509053	ENST00000498662.1	chr6_149449001_-	-448.30	-441.70	-472.90
CAediting_509054	ENST00000498662.1	chr6_149449082_-	-447.90	-441.70	-472.90
CAediting_509055	ENST00000498662.1	chr6_149449331_-	-441.70	-441.70	-472.90
CAediting_509056	ENST00000498662.1	chr6_149449332_-	-441.80	-441.70	-472.90
CAediting_509057	ENST00000498662.1	chr6_149449344_-	-441.00	-441.70	-472.90
CAediting_509058	ENST00000498662.1	chr6_149449357_-	-442.20	-441.70	-472.90
CAediting_509059	ENST00000498662.1	chr6_149449361_-	-443.90	-441.70	-472.90
CAediting_509060	ENST00000498662.1	chr6_149449362_-	-441.40	-441.70	-472.90
CAediting_509061	ENST00000498662.1	chr6_149449375_-	-441.80	-441.70	-472.90
CAediting_509062	ENST00000498662.1	chr6_149449376_-	-441.40	-441.70	-472.90

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Relation with ADAR for ZC3H12D

Correlation between ADAR gene expression and RNA editing frequency

Cancer	CAeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
STAD	CAediting_509054	chr6_149449082_-	0.0452753835745899	0.187909626301077	.	.	0.0108633392012926	0.237743769341162

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Relation with cancer stages for ZC3H12D

Correlation between Cancer stages and RNA editing frequency

Cancer

Stage_type

CAeditomID

position

P-val

Coeff.

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Relation with survival for ZC3H12D

Correlation between RNA editing and survival

Cancer

CAeditomID

position

KMpvalue

Coxpvalue

CoxHR

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RelatedDrugs for ZC3H12D

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for ZC3H12D

Diseases associated with this gene.
(DisGeNet 7.0)

Gene

Disease ID

Disease name

# pubmeds

Source

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene