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Editing gene: HSPD1 (CAeditome ID:3329)

Gene summary for HSPD1

Gene summary

Gene information	Gene symbol	HSPD1
	Gene ID	3329
	Gene name	heat shock protein family D (Hsp60) member 1
	Synonyms	CPN60\|GROEL\|HLD4\|HSP-60\|HSP60\|HSP65\|HuCHA60\|SPG13
	Cytomap	2q33.1
	Type of gene	protein-coding
	Description	60 kDa heat shock protein, mitochondrial60 kDa chaperoninP60 lymphocyte proteinchaperonin 60epididymis secretory sperm binding proteinheat shock 60kDa protein 1 (chaperonin)heat shock protein 65mitochondrial matrix protein P1short heat shock prote
	Modification date	20210531
	UniProtAcc	P10809
	Context	- 31222140(HSPD1 repressed E-cadherin expression to promote cell invasion and migration for poor prognosis in oral squamous cell carcinoma)

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene	GO ID	GO term	PubMed ID
HSPD1	GO:0044406	60 kDa heat shock protein, mitochondrial	20633027
HSPD1	GO:0032729	60 kDa heat shock protein, mitochondrial	17164250
HSPD1	GO:0042110	60 kDa heat shock protein, mitochondrial	15371451
HSPD1	GO:0042110	60 kDa heat shock protein, mitochondrial	17164250
HSPD1	GO:0042110	60 kDa heat shock protein, mitochondrial	18256040
HSPD1	GO:0001530	60 kDa heat shock protein, mitochondrial	17164250
HSPD1	GO:0003725	60 kDa heat shock protein, mitochondrial	21266579
HSPD1	GO:0008035	60 kDa heat shock protein, mitochondrial	11027668
HSPD1	GO:0002755	60 kDa heat shock protein, mitochondrial	16148103
HSPD1	GO:0002842	60 kDa heat shock protein, mitochondrial	10663613
HSPD1	GO:0006919	60 kDa heat shock protein, mitochondrial	17823127
HSPD1	GO:0006986	60 kDa heat shock protein, mitochondrial	11050098
HSPD1	GO:0032727	60 kDa heat shock protein, mitochondrial	17164250
HSPD1	GO:0032729	60 kDa heat shock protein, mitochondrial	17164250
HSPD1	GO:0032733	60 kDa heat shock protein, mitochondrial	16148103
HSPD1	GO:0032735	60 kDa heat shock protein, mitochondrial	17164250
HSPD1	GO:0032755	60 kDa heat shock protein, mitochondrial	16148103
HSPD1	GO:0042026	60 kDa heat shock protein, mitochondrial	11050098
HSPD1	GO:0042100	60 kDa heat shock protein, mitochondrial	16148103
HSPD1	GO:0042113	60 kDa heat shock protein, mitochondrial	16148103
HSPD1	GO:0043032	60 kDa heat shock protein, mitochondrial	17164250
HSPD1	GO:0048291	60 kDa heat shock protein, mitochondrial	16148103
HSPD1	GO:0050870	60 kDa heat shock protein, mitochondrial	16148103
HSPD1	GO:0050870	60 kDa heat shock protein, mitochondrial	17164250
HSPD1	GO:0005615	60 kDa heat shock protein, mitochondrial	18229457
HSPD1	GO:0005737	60 kDa heat shock protein, mitochondrial	21328542
HSPD1	GO:0005739	60 kDa heat shock protein, mitochondrial	0000052
HSPD1	GO:0005739	60 kDa heat shock protein, mitochondrial	17823127
HSPD1	GO:0005739	60 kDa heat shock protein, mitochondrial	18086682
HSPD1	GO:0005739	60 kDa heat shock protein, mitochondrial	21245038
HSPD1	GO:0005759	60 kDa heat shock protein, mitochondrial	19393246
HSPD1	GO:0005759	60 kDa heat shock protein, mitochondrial	24746669
HSPD1	GO:0005769	60 kDa heat shock protein, mitochondrial	11807771
HSPD1	GO:0005829	60 kDa heat shock protein, mitochondrial	17823127
HSPD1	GO:0005829	60 kDa heat shock protein, mitochondrial	18086682
HSPD1	GO:0005886	60 kDa heat shock protein, mitochondrial	11027668
HSPD1	GO:0005905	60 kDa heat shock protein, mitochondrial	11807771
HSPD1	GO:0009986	60 kDa heat shock protein, mitochondrial	10663613
HSPD1	GO:0009986	60 kDa heat shock protein, mitochondrial	11807771
HSPD1	GO:0009986	60 kDa heat shock protein, mitochondrial	9243807
HSPD1	GO:0030135	60 kDa heat shock protein, mitochondrial	11807771
HSPD1	GO:0070062	60 kDa heat shock protein, mitochondrial	21276792
HSPD1	GO:0032991	60 kDa heat shock protein, mitochondrial	21328542
HSPD1	GO:0032991	60 kDa heat shock protein, mitochondrial	23349634
HSPD1	GO:0046696	60 kDa heat shock protein, mitochondrial	17164250

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RNA A-to-I events for HSPD1

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000144381.15

RNA A-to-I editing events in Cancer.

CAediting_230934(197486772, -), CAediting_230935(197486800, -), CAediting_230936(197486811, -), CAediting_230937(197487007, -), CAediting_230938(197487302, -), CAediting_230939(197487329, -), CAediting_230940(197487355, -), CAediting_230941(197487491, -), CAediting_230942(197488756, -), CAediting_230943(197489603, -), CAediting_230944(197489636, -), CAediting_230945(197489642, -), CAediting_230946(197489647, -), CAediting_230947(197489656, -), CAediting_230948(197489666, -), CAediting_230949(197489673, -), CAediting_230950(197489694, -), CAediting_230951(197489746, -), CAediting_230952(197489755, -), CAediting_230953(197489772, -), CAediting_230954(197489773, -), CAediting_230955(197489786, -), CAediting_230956(197489811, -), CAediting_230957(197489821, -), CAediting_230958(197489833, -), CAediting_230959(197489851, -), CAediting_230960(197490572, -), CAediting_230961(197490574, -), CAediting_230962(197490586, -), CAediting_230963(197490587, -), CAediting_230964(197490624, -), CAediting_230965(197490625, -), CAediting_230966(197490657, -), CAediting_230967(197490659, -), CAediting_230968(197490661, -), CAediting_230969(197490663, -), CAediting_230970(197490666, -), CAediting_230971(197490672, -), CAediting_230972(197490690, -), CAediting_230973(197490692, -), CAediting_230974(197490718, -), CAediting_230975(197491217, -), CAediting_230976(197491218, -), CAediting_230977(197491245, -), CAediting_230978(197491253, -), CAediting_230979(197491260, -), CAediting_230980(197491277, -), CAediting_230981(197491280, -), CAediting_230982(197491284, -), CAediting_230983(197491285, -), CAediting_230984(197491286, -), CAediting_230985(197491325, -), CAediting_230986(197491328, -), CAediting_230987(197491329, -), CAediting_230988(197491330, -), CAediting_230989(197491331, -), CAediting_230990(197491333, -), CAediting_230991(197491337, -), CAediting_230992(197491338, -), CAediting_230993(197491355, -), CAediting_230994(197491356, -), CAediting_230995(197491363, -), CAediting_230996(197491389, -), CAediting_230997(197491410, -), CAediting_230998(197491415, -), CAediting_230999(197491416, -), CAediting_231000(197491424, -), CAediting_231001(197491427, -), CAediting_231002(197491432, -), CAediting_231003(197491433, -), CAediting_231004(197491842, -), CAediting_231005(197491873, -), CAediting_231006(197491876, -), CAediting_231007(197491880, -), CAediting_231008(197491894, -), CAediting_231009(197491904, -), CAediting_231010(197491909, -), CAediting_231011(197491921, -), CAediting_231012(197491922, -), CAediting_231013(197491938, -), CAediting_231014(197491939, -), CAediting_231015(197491940, -), CAediting_231016(197491946, -), CAediting_231017(197491962, -), CAediting_231018(197491963, -), CAediting_231019(197491976, -), CAediting_231020(197491983, -), CAediting_231021(197491990, -), CAediting_231022(197492000, -), CAediting_231023(197492001, -), CAediting_231024(197492017, -), CAediting_231025(197492022, -), CAediting_231026(197492023, -), CAediting_231027(197492035, -), CAediting_231028(197492045, -), CAediting_231029(197492048, -), CAediting_231030(197492049, -), CAediting_231031(197492057, -), CAediting_231032(197492071, -), CAediting_231033(197492074, -), CAediting_231034(197492075, -), CAediting_231035(197492088, -), CAediting_231036(197492095, -), CAediting_231037(197492105, -), CAediting_231038(197492113, -), CAediting_231039(197492135, -), CAediting_231040(197492145, -), CAediting_231041(197492157, -), CAediting_231042(197492206, -), CAediting_231043(197492229, -), CAediting_231044(197492258, -), CAediting_231045(197492273, -), CAediting_231046(197492287, -), CAediting_231047(197492293, -), CAediting_231048(197492297, -), CAediting_231049(197492302, -), CAediting_231050(197492306, -), CAediting_231051(197492314, -), CAediting_231052(197492318, -), CAediting_231053(197492322, -), CAediting_231054(197492327, -), CAediting_231055(197492328, -), CAediting_231056(197492346, -), CAediting_231057(197492349, -), CAediting_231058(197492351, -), CAediting_231059(197492354, -), CAediting_231060(197492357, -), CAediting_231061(197492358, -), CAediting_231062(197492359, -), CAediting_231063(197492360, -), CAediting_231064(197492365, -), CAediting_231065(197492367, -), CAediting_231066(197492368, -), CAediting_231067(197492369, -), CAediting_231068(197492372, -), CAediting_231069(197492383, -), CAediting_231070(197492384, -), CAediting_231071(197492385, -), CAediting_231072(197492389, -), CAediting_231073(197492391, -), CAediting_231074(197492393, -), CAediting_231075(197492408, -), CAediting_231076(197492417, -), CAediting_231077(197492420, -), CAediting_231078(197492422, -), CAediting_231079(197492446, -), CAediting_231080(197492454, -), CAediting_231081(197492457, -), CAediting_231082(197492462, -), CAediting_231083(197492463, -), CAediting_231084(197492465, -), CAediting_231085(197492469, -), CAediting_231086(197492471, -), CAediting_231087(197492481, -), CAediting_231088(197492485, -), CAediting_231089(197492489, -), CAediting_231090(197492500, -), CAediting_231091(197492679, -), CAediting_231092(197492691, -), CAediting_231093(197492777, -), CAediting_231094(197492798, -), CAediting_231095(197492825, -), CAediting_231096(197492827, -), CAediting_231097(197492838, -), CAediting_231098(197492844, -), CAediting_231099(197492853, -), CAediting_231100(197492861, -), CAediting_231101(197492862, -), CAediting_231102(197492870, -), CAediting_231103(197492888, -), CAediting_231104(197492898, -), CAediting_231105(197492910, -), CAediting_231106(197492925, -), CAediting_231107(197492931, -), CAediting_231108(197492960, -), CAediting_231109(197493001, -), CAediting_231110(197495579, -), CAediting_231111(197495652, -), CAediting_231112(197495662, -), CAediting_231113(197495702, -), CAediting_231114(197495714, -), CAediting_231115(197495715, -), CAediting_231116(197495722, -), CAediting_231117(197495732, -), CAediting_231118(197496836, -), CAediting_231119(197496889, -), CAediting_231120(197496904, -), CAediting_231121(197496906, -),

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RNA editing positional annotations for HSPD1 using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_230934	chr2_197486772_-	UTR3
CAediting_230935	chr2_197486800_-	UTR3
CAediting_230936	chr2_197486811_-	UTR3
CAediting_230937	chr2_197487007_-	UTR3
CAediting_230938	chr2_197487302_-	intronic
CAediting_230939	chr2_197487329_-	intronic
CAediting_230940	chr2_197487355_-	intronic
CAediting_230941	chr2_197487491_-	intronic
CAediting_230942	chr2_197488756_-	ncRNA_intronic
CAediting_230943	chr2_197489603_-	ncRNA_intronic
CAediting_230944	chr2_197489636_-	ncRNA_intronic
CAediting_230945	chr2_197489642_-	ncRNA_intronic
CAediting_230946	chr2_197489647_-	ncRNA_intronic
CAediting_230947	chr2_197489656_-	ncRNA_intronic
CAediting_230948	chr2_197489666_-	ncRNA_intronic
CAediting_230949	chr2_197489673_-	ncRNA_intronic
CAediting_230950	chr2_197489694_-	ncRNA_intronic
CAediting_230951	chr2_197489746_-	ncRNA_intronic
CAediting_230952	chr2_197489755_-	ncRNA_intronic
CAediting_230953	chr2_197489772_-	ncRNA_intronic
CAediting_230954	chr2_197489773_-	ncRNA_intronic
CAediting_230955	chr2_197489786_-	ncRNA_intronic
CAediting_230956	chr2_197489811_-	ncRNA_intronic
CAediting_230957	chr2_197489821_-	ncRNA_intronic
CAediting_230958	chr2_197489833_-	ncRNA_intronic
CAediting_230959	chr2_197489851_-	ncRNA_intronic
CAediting_230960	chr2_197490572_-	ncRNA_exonic
CAediting_230961	chr2_197490574_-	intronic
CAediting_230962	chr2_197490586_-	intronic
CAediting_230963	chr2_197490587_-	intronic
CAediting_230964	chr2_197490624_-	intronic
CAediting_230965	chr2_197490625_-	intronic
CAediting_230966	chr2_197490657_-	intronic
CAediting_230967	chr2_197490659_-	intronic
CAediting_230968	chr2_197490661_-	intronic
CAediting_230969	chr2_197490663_-	intronic
CAediting_230970	chr2_197490666_-	intronic
CAediting_230971	chr2_197490672_-	intronic
CAediting_230972	chr2_197490690_-	intronic
CAediting_230973	chr2_197490692_-	intronic
CAediting_230974	chr2_197490718_-	intronic
CAediting_230975	chr2_197491217_-	intronic
CAediting_230976	chr2_197491218_-	intronic
CAediting_230977	chr2_197491245_-	intronic
CAediting_230978	chr2_197491253_-	intronic
CAediting_230979	chr2_197491260_-	intronic
CAediting_230980	chr2_197491277_-	intronic
CAediting_230981	chr2_197491280_-	intronic
CAediting_230982	chr2_197491284_-	intronic
CAediting_230983	chr2_197491285_-	intronic
CAediting_230984	chr2_197491286_-	intronic
CAediting_230985	chr2_197491325_-	intronic
CAediting_230986	chr2_197491328_-	intronic
CAediting_230987	chr2_197491329_-	intronic
CAediting_230988	chr2_197491330_-	intronic
CAediting_230989	chr2_197491331_-	intronic
CAediting_230990	chr2_197491333_-	intronic
CAediting_230991	chr2_197491337_-	intronic
CAediting_230992	chr2_197491338_-	intronic
CAediting_230993	chr2_197491355_-	intronic
CAediting_230994	chr2_197491356_-	intronic
CAediting_230995	chr2_197491363_-	intronic
CAediting_230996	chr2_197491389_-	intronic
CAediting_230997	chr2_197491410_-	intronic
CAediting_230998	chr2_197491415_-	intronic
CAediting_230999	chr2_197491416_-	intronic
CAediting_231000	chr2_197491424_-	intronic
CAediting_231001	chr2_197491427_-	intronic
CAediting_231002	chr2_197491432_-	intronic
CAediting_231003	chr2_197491433_-	intronic
CAediting_231004	chr2_197491842_-	intronic
CAediting_231005	chr2_197491873_-	intronic
CAediting_231006	chr2_197491876_-	intronic
CAediting_231007	chr2_197491880_-	intronic
CAediting_231008	chr2_197491894_-	intronic
CAediting_231009	chr2_197491904_-	intronic
CAediting_231010	chr2_197491909_-	intronic
CAediting_231011	chr2_197491921_-	intronic
CAediting_231012	chr2_197491922_-	intronic
CAediting_231013	chr2_197491938_-	intronic
CAediting_231014	chr2_197491939_-	intronic
CAediting_231015	chr2_197491940_-	intronic
CAediting_231016	chr2_197491946_-	intronic
CAediting_231017	chr2_197491962_-	intronic
CAediting_231018	chr2_197491963_-	intronic
CAediting_231019	chr2_197491976_-	intronic
CAediting_231020	chr2_197491983_-	intronic
CAediting_231021	chr2_197491990_-	intronic
CAediting_231022	chr2_197492000_-	intronic
CAediting_231023	chr2_197492001_-	intronic
CAediting_231024	chr2_197492017_-	intronic
CAediting_231025	chr2_197492022_-	intronic
CAediting_231026	chr2_197492023_-	intronic
CAediting_231027	chr2_197492035_-	intronic
CAediting_231028	chr2_197492045_-	intronic
CAediting_231029	chr2_197492048_-	intronic
CAediting_231030	chr2_197492049_-	intronic
CAediting_231031	chr2_197492057_-	intronic
CAediting_231032	chr2_197492071_-	intronic
CAediting_231033	chr2_197492074_-	intronic
CAediting_231034	chr2_197492075_-	intronic
CAediting_231035	chr2_197492088_-	intronic
CAediting_231036	chr2_197492095_-	intronic
CAediting_231037	chr2_197492105_-	intronic
CAediting_231038	chr2_197492113_-	intronic
CAediting_231039	chr2_197492135_-	intronic
CAediting_231040	chr2_197492145_-	intronic
CAediting_231041	chr2_197492157_-	intronic
CAediting_231042	chr2_197492206_-	intronic
CAediting_231043	chr2_197492229_-	intronic
CAediting_231044	chr2_197492258_-	intronic
CAediting_231045	chr2_197492273_-	intronic
CAediting_231046	chr2_197492287_-	intronic
CAediting_231047	chr2_197492293_-	intronic
CAediting_231048	chr2_197492297_-	intronic
CAediting_231049	chr2_197492302_-	intronic
CAediting_231050	chr2_197492306_-	intronic
CAediting_231051	chr2_197492314_-	intronic
CAediting_231052	chr2_197492318_-	intronic
CAediting_231053	chr2_197492322_-	intronic
CAediting_231054	chr2_197492327_-	intronic
CAediting_231055	chr2_197492328_-	intronic
CAediting_231056	chr2_197492346_-	intronic
CAediting_231057	chr2_197492349_-	intronic
CAediting_231058	chr2_197492351_-	intronic
CAediting_231059	chr2_197492354_-	intronic
CAediting_231060	chr2_197492357_-	intronic
CAediting_231061	chr2_197492358_-	intronic
CAediting_231062	chr2_197492359_-	intronic
CAediting_231063	chr2_197492360_-	intronic
CAediting_231064	chr2_197492365_-	intronic
CAediting_231065	chr2_197492367_-	intronic
CAediting_231066	chr2_197492368_-	intronic
CAediting_231067	chr2_197492369_-	intronic
CAediting_231068	chr2_197492372_-	intronic
CAediting_231069	chr2_197492383_-	intronic
CAediting_231070	chr2_197492384_-	intronic
CAediting_231071	chr2_197492385_-	intronic
CAediting_231072	chr2_197492389_-	intronic
CAediting_231073	chr2_197492391_-	intronic
CAediting_231074	chr2_197492393_-	intronic
CAediting_231075	chr2_197492408_-	intronic
CAediting_231076	chr2_197492417_-	intronic
CAediting_231077	chr2_197492420_-	intronic
CAediting_231078	chr2_197492422_-	intronic
CAediting_231079	chr2_197492446_-	intronic
CAediting_231080	chr2_197492454_-	intronic
CAediting_231081	chr2_197492457_-	intronic
CAediting_231082	chr2_197492462_-	intronic
CAediting_231083	chr2_197492463_-	intronic
CAediting_231084	chr2_197492465_-	intronic
CAediting_231085	chr2_197492469_-	intronic
CAediting_231086	chr2_197492471_-	intronic
CAediting_231087	chr2_197492481_-	intronic
CAediting_231088	chr2_197492485_-	intronic
CAediting_231089	chr2_197492489_-	intronic
CAediting_231090	chr2_197492500_-	intronic
CAediting_231091	chr2_197492679_-	intronic
CAediting_231092	chr2_197492691_-	intronic
CAediting_231093	chr2_197492777_-	intronic
CAediting_231094	chr2_197492798_-	intronic
CAediting_231095	chr2_197492825_-	intronic
CAediting_231096	chr2_197492827_-	intronic
CAediting_231097	chr2_197492838_-	intronic
CAediting_231098	chr2_197492844_-	intronic
CAediting_231099	chr2_197492853_-	intronic
CAediting_231100	chr2_197492861_-	intronic
CAediting_231101	chr2_197492862_-	intronic
CAediting_231102	chr2_197492870_-	intronic
CAediting_231103	chr2_197492888_-	intronic
CAediting_231104	chr2_197492898_-	intronic
CAediting_231105	chr2_197492910_-	intronic
CAediting_231106	chr2_197492925_-	intronic
CAediting_231107	chr2_197492931_-	intronic
CAediting_231108	chr2_197492960_-	intronic
CAediting_231109	chr2_197493001_-	intronic
CAediting_231110	chr2_197495579_-	ncRNA_intronic
CAediting_231111	chr2_197495652_-	ncRNA_intronic
CAediting_231112	chr2_197495662_-	ncRNA_intronic
CAediting_231113	chr2_197495702_-	ncRNA_intronic
CAediting_231114	chr2_197495714_-	ncRNA_intronic
CAediting_231115	chr2_197495715_-	ncRNA_intronic
CAediting_231116	chr2_197495722_-	ncRNA_intronic
CAediting_231117	chr2_197495732_-	ncRNA_intronic
CAediting_231118	chr2_197496836_-	ncRNA_intronic
CAediting_231119	chr2_197496889_-	ncRNA_intronic
CAediting_231120	chr2_197496904_-	ncRNA_exonic
CAediting_231121	chr2_197496906_-	ncRNA_exonic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_230938	chr2_197487302_-	SINE	Alu	AluSz
CAediting_230939	chr2_197487329_-	SINE	Alu	AluSz
CAediting_230940	chr2_197487355_-	SINE	Alu	AluSz
CAediting_230941	chr2_197487491_-	SINE	Alu	AluSz
CAediting_230942	chr2_197488756_-	SINE	Alu	AluSz
CAediting_230943	chr2_197489603_-	SINE	Alu	AluJr
CAediting_230944	chr2_197489636_-	SINE	Alu	AluJr
CAediting_230945	chr2_197489642_-	SINE	Alu	AluJr
CAediting_230946	chr2_197489647_-	SINE	Alu	AluJr
CAediting_230947	chr2_197489656_-	SINE	Alu	AluJr
CAediting_230948	chr2_197489666_-	SINE	Alu	AluJr
CAediting_230949	chr2_197489673_-	SINE	Alu	AluJr
CAediting_230950	chr2_197489694_-	SINE	Alu	AluJr
CAediting_230951	chr2_197489746_-	SINE	Alu	AluJr
CAediting_230952	chr2_197489755_-	SINE	Alu	AluJr
CAediting_230953	chr2_197489772_-	SINE	Alu	AluJr
CAediting_230954	chr2_197489773_-	SINE	Alu	AluJr
CAediting_230955	chr2_197489786_-	SINE	Alu	AluJr
CAediting_230956	chr2_197489811_-	SINE	Alu	AluJr
CAediting_230957	chr2_197489821_-	SINE	Alu	AluJr
CAediting_230958	chr2_197489833_-	SINE	Alu	AluJr
CAediting_230959	chr2_197489851_-	SINE	Alu	AluJr
CAediting_230960	chr2_197490572_-	SINE	Alu	AluSg4
CAediting_230961	chr2_197490574_-	SINE	Alu	AluSg4
CAediting_230962	chr2_197490586_-	SINE	Alu	AluSg4
CAediting_230963	chr2_197490587_-	SINE	Alu	AluSg4
CAediting_230964	chr2_197490624_-	SINE	Alu	AluSg4
CAediting_230965	chr2_197490625_-	SINE	Alu	AluSg4
CAediting_230966	chr2_197490657_-	SINE	Alu	AluSg4
CAediting_230967	chr2_197490659_-	SINE	Alu	AluSg4
CAediting_230968	chr2_197490661_-	SINE	Alu	AluSg4
CAediting_230969	chr2_197490663_-	SINE	Alu	AluSg4
CAediting_230970	chr2_197490666_-	SINE	Alu	AluSg4
CAediting_230971	chr2_197490672_-	SINE	Alu	AluSg4
CAediting_230972	chr2_197490690_-	SINE	Alu	AluSg4
CAediting_230973	chr2_197490692_-	SINE	Alu	AluSg4
CAediting_230974	chr2_197490718_-	SINE	Alu	AluSg4
CAediting_230975	chr2_197491217_-	SINE	Alu	AluY
CAediting_230976	chr2_197491218_-	SINE	Alu	AluY
CAediting_230977	chr2_197491245_-	SINE	Alu	AluY
CAediting_230978	chr2_197491253_-	SINE	Alu	AluY
CAediting_230979	chr2_197491260_-	SINE	Alu	AluY
CAediting_230980	chr2_197491277_-	SINE	Alu	AluY
CAediting_230981	chr2_197491280_-	SINE	Alu	AluY
CAediting_230982	chr2_197491284_-	SINE	Alu	AluY
CAediting_230983	chr2_197491285_-	SINE	Alu	AluY
CAediting_230984	chr2_197491286_-	SINE	Alu	AluY
CAediting_230985	chr2_197491325_-	SINE	Alu	AluY
CAediting_230986	chr2_197491328_-	SINE	Alu	AluY
CAediting_230987	chr2_197491329_-	SINE	Alu	AluY
CAediting_230988	chr2_197491330_-	SINE	Alu	AluY
CAediting_230989	chr2_197491331_-	SINE	Alu	AluY
CAediting_230990	chr2_197491333_-	SINE	Alu	AluY
CAediting_230991	chr2_197491337_-	SINE	Alu	AluY
CAediting_230992	chr2_197491338_-	SINE	Alu	AluY
CAediting_230993	chr2_197491355_-	SINE	Alu	AluY
CAediting_230994	chr2_197491356_-	SINE	Alu	AluY
CAediting_230995	chr2_197491363_-	SINE	Alu	AluY
CAediting_230996	chr2_197491389_-	SINE	Alu	AluY
CAediting_230997	chr2_197491410_-	SINE	Alu	AluY
CAediting_230998	chr2_197491415_-	SINE	Alu	AluY
CAediting_230999	chr2_197491416_-	SINE	Alu	AluY
CAediting_231000	chr2_197491424_-	SINE	Alu	AluY
CAediting_231001	chr2_197491427_-	SINE	Alu	AluY
CAediting_231002	chr2_197491432_-	SINE	Alu	AluY
CAediting_231003	chr2_197491433_-	SINE	Alu	AluY
CAediting_231005	chr2_197491873_-	SINE	Alu	AluJr
CAediting_231006	chr2_197491876_-	SINE	Alu	AluJr
CAediting_231007	chr2_197491880_-	SINE	Alu	AluJr
CAediting_231008	chr2_197491894_-	SINE	Alu	AluJr
CAediting_231009	chr2_197491904_-	SINE	Alu	AluJr
CAediting_231010	chr2_197491909_-	SINE	Alu	AluJr
CAediting_231011	chr2_197491921_-	SINE	Alu	AluJr
CAediting_231012	chr2_197491922_-	SINE	Alu	AluJr
CAediting_231013	chr2_197491938_-	SINE	Alu	AluJr
CAediting_231014	chr2_197491939_-	SINE	Alu	AluJr
CAediting_231015	chr2_197491940_-	SINE	Alu	AluJr
CAediting_231016	chr2_197491946_-	SINE	Alu	AluJr
CAediting_231017	chr2_197491962_-	SINE	Alu	AluJr
CAediting_231018	chr2_197491963_-	SINE	Alu	AluJr
CAediting_231019	chr2_197491976_-	SINE	Alu	AluJr
CAediting_231020	chr2_197491983_-	SINE	Alu	AluJr
CAediting_231021	chr2_197491990_-	SINE	Alu	AluJr
CAediting_231022	chr2_197492000_-	SINE	Alu	AluJr
CAediting_231023	chr2_197492001_-	SINE	Alu	AluJr
CAediting_231024	chr2_197492017_-	SINE	Alu	AluJr
CAediting_231025	chr2_197492022_-	SINE	Alu	AluJr
CAediting_231026	chr2_197492023_-	SINE	Alu	AluJr
CAediting_231027	chr2_197492035_-	SINE	Alu	AluJr
CAediting_231028	chr2_197492045_-	SINE	Alu	AluJr
CAediting_231029	chr2_197492048_-	SINE	Alu	AluJr
CAediting_231030	chr2_197492049_-	SINE	Alu	AluJr
CAediting_231031	chr2_197492057_-	SINE	Alu	AluJr
CAediting_231032	chr2_197492071_-	SINE	Alu	AluJr
CAediting_231033	chr2_197492074_-	SINE	Alu	AluJr
CAediting_231034	chr2_197492075_-	SINE	Alu	AluJr
CAediting_231035	chr2_197492088_-	SINE	Alu	AluJr
CAediting_231036	chr2_197492095_-	SINE	Alu	AluJr
CAediting_231037	chr2_197492105_-	SINE	Alu	AluJr
CAediting_231038	chr2_197492113_-	SINE	Alu	AluJr
CAediting_231039	chr2_197492135_-	SINE	Alu	AluJr
CAediting_231040	chr2_197492145_-	SINE	Alu	AluJr
CAediting_231041	chr2_197492157_-	SINE	Alu	AluJr
CAediting_231042	chr2_197492206_-	SINE	Alu	AluSx
CAediting_231043	chr2_197492229_-	SINE	Alu	AluSx
CAediting_231044	chr2_197492258_-	SINE	Alu	AluSx
CAediting_231045	chr2_197492273_-	SINE	Alu	AluSx
CAediting_231046	chr2_197492287_-	SINE	Alu	AluSx
CAediting_231047	chr2_197492293_-	SINE	Alu	AluSx
CAediting_231048	chr2_197492297_-	SINE	Alu	AluSx
CAediting_231049	chr2_197492302_-	SINE	Alu	AluSx
CAediting_231050	chr2_197492306_-	SINE	Alu	AluSx
CAediting_231051	chr2_197492314_-	SINE	Alu	AluSx
CAediting_231052	chr2_197492318_-	SINE	Alu	AluSx
CAediting_231053	chr2_197492322_-	SINE	Alu	AluSx
CAediting_231054	chr2_197492327_-	SINE	Alu	AluSx
CAediting_231055	chr2_197492328_-	SINE	Alu	AluSx
CAediting_231056	chr2_197492346_-	SINE	Alu	AluSx
CAediting_231057	chr2_197492349_-	SINE	Alu	AluSx
CAediting_231058	chr2_197492351_-	SINE	Alu	AluSx
CAediting_231059	chr2_197492354_-	SINE	Alu	AluSx
CAediting_231060	chr2_197492357_-	SINE	Alu	AluSx
CAediting_231061	chr2_197492358_-	SINE	Alu	AluSx
CAediting_231062	chr2_197492359_-	SINE	Alu	AluSx
CAediting_231063	chr2_197492360_-	SINE	Alu	AluSx
CAediting_231064	chr2_197492365_-	SINE	Alu	AluSx
CAediting_231065	chr2_197492367_-	SINE	Alu	AluSx
CAediting_231066	chr2_197492368_-	SINE	Alu	AluSx
CAediting_231067	chr2_197492369_-	SINE	Alu	AluSx
CAediting_231068	chr2_197492372_-	SINE	Alu	AluSx
CAediting_231069	chr2_197492383_-	SINE	Alu	AluSx
CAediting_231070	chr2_197492384_-	SINE	Alu	AluSx
CAediting_231071	chr2_197492385_-	SINE	Alu	AluSx
CAediting_231072	chr2_197492389_-	SINE	Alu	AluSx
CAediting_231073	chr2_197492391_-	SINE	Alu	AluSx
CAediting_231074	chr2_197492393_-	SINE	Alu	AluSx
CAediting_231075	chr2_197492408_-	SINE	Alu	AluSx
CAediting_231076	chr2_197492417_-	SINE	Alu	AluSx
CAediting_231077	chr2_197492420_-	SINE	Alu	AluSx
CAediting_231078	chr2_197492422_-	SINE	Alu	AluSx
CAediting_231079	chr2_197492446_-	SINE	Alu	AluSx
CAediting_231080	chr2_197492454_-	SINE	Alu	AluSx
CAediting_231081	chr2_197492457_-	SINE	Alu	AluSx
CAediting_231082	chr2_197492462_-	SINE	Alu	AluSx
CAediting_231083	chr2_197492463_-	SINE	Alu	AluSx
CAediting_231084	chr2_197492465_-	SINE	Alu	AluSx
CAediting_231085	chr2_197492469_-	SINE	Alu	AluSx
CAediting_231086	chr2_197492471_-	SINE	Alu	AluSx
CAediting_231087	chr2_197492481_-	SINE	Alu	AluSx
CAediting_231088	chr2_197492485_-	SINE	Alu	AluSx
CAediting_231091	chr2_197492679_-	SINE	Alu	AluYe5
CAediting_231092	chr2_197492691_-	SINE	Alu	AluYe5
CAediting_231093	chr2_197492777_-	SINE	Alu	AluSx4
CAediting_231094	chr2_197492798_-	SINE	Alu	AluSx4
CAediting_231095	chr2_197492825_-	SINE	Alu	AluSx4
CAediting_231096	chr2_197492827_-	SINE	Alu	AluSx4
CAediting_231097	chr2_197492838_-	SINE	Alu	AluSx4
CAediting_231098	chr2_197492844_-	SINE	Alu	AluSx4
CAediting_231099	chr2_197492853_-	SINE	Alu	AluSx4
CAediting_231100	chr2_197492861_-	SINE	Alu	AluSx4
CAediting_231101	chr2_197492862_-	SINE	Alu	AluSx4
CAediting_231102	chr2_197492870_-	SINE	Alu	AluSx4
CAediting_231103	chr2_197492888_-	SINE	Alu	AluSx4
CAediting_231104	chr2_197492898_-	SINE	Alu	AluSx4
CAediting_231105	chr2_197492910_-	SINE	Alu	AluSx4
CAediting_231106	chr2_197492925_-	SINE	Alu	AluSx4
CAediting_231107	chr2_197492931_-	SINE	Alu	AluSx4
CAediting_231108	chr2_197492960_-	SINE	Alu	AluSx4
CAediting_231109	chr2_197493001_-	SINE	Alu	AluSx4
CAediting_231110	chr2_197495579_-	SINE	Alu	AluJo
CAediting_231111	chr2_197495652_-	SINE	Alu	AluJo
CAediting_231112	chr2_197495662_-	SINE	Alu	AluJo
CAediting_231113	chr2_197495702_-	SINE	Alu	AluJo
CAediting_231114	chr2_197495714_-	SINE	Alu	AluJo
CAediting_231115	chr2_197495715_-	SINE	Alu	AluJo
CAediting_231116	chr2_197495722_-	SINE	Alu	AluJo
CAediting_231117	chr2_197495732_-	SINE	Alu	AluJo
CAediting_231118	chr2_197496836_-	SINE	Alu	AluJr4
CAediting_231119	chr2_197496889_-	SINE	Alu	AluJr4
CAediting_231120	chr2_197496904_-	SINE	Alu	AluJr4
CAediting_231121	chr2_197496906_-	SINE	Alu	AluJr4

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RNA A-to-I editing events in the alternative splicing sites for HSPD1

RNA A-to-I editing(s) in the alternative splicing sites.

AStype	CAeditomID	Editing position	AS position	AS direction	Exonic location	Wildtype sequence	Wildtype splicing strength	RNA edited sequence	RNA edited splicing strength
IR	CAediting_230934	chr2_197486772_-	197486768:197486790	3SS	0+2i	AGAGCCATGTACCAGTGTACTGC	-10.99	AGAGCCATGTACCAGTGTGCTGC	-18.95
IR	CAediting_230936	chr2_197486811_-	197486803:197486811	5SS	3+0i	ACATTCCTG	-28.6	GCATTCCTG	-31.05
ES	CAediting_230948	chr2_197489666_-	197489662:197489684	3SS	0+2i	GGTCTCACTGTATTGCCTAGGCT	4.66	GGTCTCACTGTATTGCCTGGGCT	-3.29
IR	CAediting_230948	chr2_197489666_-	197489662:197489684	3SS	0+2i	GGTCTCACTGTATTGCCTAGGCT	4.66	GGTCTCACTGTATTGCCTGGGCT	-3.29
ES	CAediting_230949	chr2_197489673_-	197489662:197489684	3SS	0+9i	GGTCTCACTGTATTGCCTAGGCT	4.66	GGTCTCACTGTGTTGCCTAGGCT	4.17
IR	CAediting_230949	chr2_197489673_-	197489662:197489684	3SS	0+9i	GGTCTCACTGTATTGCCTAGGCT	4.66	GGTCTCACTGTGTTGCCTAGGCT	4.17
ES	CAediting_230969	chr2_197490663_-	197490662:197490684	3SS	2+0i	CTGATTTTTGTTATTTTCAGTAG	7.05	CTGATTTTTGTTATTTTCAGTGG	8.43
MEX_1	CAediting_230969	chr2_197490663_-	197490662:197490684	3SS	2+0i	CTGATTTTTGTTATTTTCAGTAG	7.05	CTGATTTTTGTTATTTTCAGTGG	8.43
ES	CAediting_230970	chr2_197490666_-	197490662:197490684	3SS	0+2i	CTGATTTTTGTTATTTTCAGTAG	7.05	CTGATTTTTGTTATTTTCGGTAG	-0.91
MEX_1	CAediting_230970	chr2_197490666_-	197490662:197490684	3SS	0+2i	CTGATTTTTGTTATTTTCAGTAG	7.05	CTGATTTTTGTTATTTTCGGTAG	-0.91
ES	CAediting_230971	chr2_197490672_-	197490662:197490684	3SS	0+8i	CTGATTTTTGTTATTTTCAGTAG	7.05	CTGATTTTTGTTGTTTTCAGTAG	7.73
MEX_1	CAediting_230971	chr2_197490672_-	197490662:197490684	3SS	0+8i	CTGATTTTTGTTATTTTCAGTAG	7.05	CTGATTTTTGTTGTTTTCAGTAG	7.73
IR	CAediting_231107	chr2_197492931_-	197492927:197492949	3SS	0+2i	CTGCAATCTCCATCTCCTAGGTT	7.26	CTGCAATCTCCATCTCCTGGGTT	-0.7
IR	CAediting_231109	chr2_197493001_-	197492997:197493019	3SS	0+2i	ATTTTTTTTTTTTGAGACAGAGT	2.23	ATTTTTTTTTTTTGAGACGGAGT	-5.73

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000144381.15.HSPD1.

Correlation between RNA A-to-I editing and PSI for ENSG00000144381.15.HSPD1.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for HSPD1

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

STAD.CAediting_231054.ENSG00000144381.HSPD1.png
Soverview

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Protein coding region RNA A-to-I editings for HSPD1

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for HSPD1

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_230935	chr2_197486800_-	ENSG00000144381.15	ENST00000345042	hsa-miR-338-3p	197486796	197486802	7mer-m8	197486795	197486816	165.00	-23.86
CAediting_230935	chr2_197486800_-	ENSG00000144381.15	ENST00000345042	hsa-miR-4711-5p	197486799	197486805	7mer-m8	197486798	197486820	157.00	-15.05
CAediting_230934	chr2_197486772_-	ENSG00000144381.15	ENST00000345042	hsa-miR-103a-3p	197486768	197486773	6mer	197486767	197486792	151.00	-24.50
CAediting_230934	chr2_197486772_-	ENSG00000144381.15	ENST00000345042	hsa-miR-103a-3p	197486768	197486773	6mer	197486767	197486792	151.00	-24.50
CAediting_230934	chr2_197486772_-	ENSG00000144381.15	ENST00000345042	hsa-miR-107	197486768	197486773	6mer	197486767	197486792	151.00	-24.50
CAediting_230934	chr2_197486772_-	ENSG00000144381.15	ENST00000345042	hsa-miR-15a-5p	197486767	197486773	7mer-m8	197486766	197486785	158.00	-23.02
CAediting_230934	chr2_197486772_-	ENSG00000144381.15	ENST00000345042	hsa-miR-15b-5p	197486767	197486773	7mer-m8	197486766	197486785	161.00	-21.71
CAediting_230934	chr2_197486772_-	ENSG00000144381.15	ENST00000345042	hsa-miR-16-5p	197486767	197486773	7mer-m8	197486766	197486788	155.00	-22.10
CAediting_230934	chr2_197486772_-	ENSG00000144381.15	ENST00000345042	hsa-miR-16-5p	197486767	197486773	7mer-m8	197486766	197486788	155.00	-22.10
CAediting_230934	chr2_197486772_-	ENSG00000144381.15	ENST00000345042	hsa-miR-195-5p	197486767	197486773	7mer-m8	197486766	197486788	154.00	-21.50
CAediting_230934	chr2_197486772_-	ENSG00000144381.15	ENST00000345042	hsa-miR-424-5p	197486767	197486773	7mer-m8	197486766	197486794	149.00	-16.32
CAediting_230934	chr2_197486772_-	ENSG00000144381.15	ENST00000345042	hsa-miR-497-5p	197486767	197486773	7mer-m8	197486766	197486786	165.00	-22.95
CAediting_230934	chr2_197486772_-	ENSG00000144381.15	ENST00000345042	hsa-miR-6838-5p	197486767	197486773	7mer-m8	197486766	197486791	150.00	-17.72
CAediting_230934	chr2_197486772_-	ENSG00000144381.15	ENST00000345042	hsa-miR-8064	197486771	197486777	7mer-m8	197486770	197486789	145.00	-18.38
CAediting_230937	chr2_197487007_-	ENSG00000144381.15	ENST00000345042	hsa-miR-3064-3p	197487005	197487011	7mer-m8	197487004	197487026	149.00	-13.60
CAediting_230937	chr2_197487007_-	ENSG00000144381.15	ENST00000345042	hsa-miR-4722-3p	197487002	197487009	8mer-1a	197487002	197487022	145.00	-15.02
CAediting_230937	chr2_197487007_-	ENSG00000144381.15	ENST00000345042	hsa-miR-6727-3p	197487002	197487009	8mer-1a	197487002	197487021	145.00	-17.59

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_230936	chr2_197486811_-	ENSG00000144381.15	ENST00000345042	hsa-let-7c-3p	197486809	197486815	7mer-m8	197486808	197486829	140	-5.85
CAediting_230937	chr2_197487007_-	ENSG00000144381.15	ENST00000345042	hsa-miR-12122	197487005	197487012	8mer-1a	197487005	197487029	149	-14.77
CAediting_230937	chr2_197487007_-	ENSG00000144381.15	ENST00000345042	hsa-miR-27a-3p	197487007	197487013	7mer-m8	197487006	197487026	144	-9.46
CAediting_230937	chr2_197487007_-	ENSG00000144381.15	ENST00000345042	hsa-miR-27b-3p	197487007	197487013	7mer-m8	197487006	197487026	144	-8.72
CAediting_230934	chr2_197486772_-	ENSG00000144381.15	ENST00000345042	hsa-miR-4519	197486767	197486772	6mer	197486766	197486783	142	-18.7
CAediting_230937	chr2_197487007_-	ENSG00000144381.15	ENST00000345042	hsa-miR-6773-3p	197487004	197487010	7mer-m8	197487003	197487026	142	-11.5
CAediting_230937	chr2_197487007_-	ENSG00000144381.15	ENST00000345042	hsa-miR-9985	197487007	197487013	7mer-m8	197487006	197487025	141	-8.72

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for HSPD1

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST	ENST type	RNA structure without RNA A-to-I editing.	RNA structure with RNA A-to-I editing.
ENST00000345042.5	protein_coding
ENST00000388968.6	protein_coding
ENST00000491249.1	retained_intron
ENST00000461097.1	retained_intron

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID	ENST	Editing_Position	MFE_withoneAI	MFE_withoutAI	MFE_withmultipleAI
CAediting_230934	ENST00000345042.5	chr2_197486772_-	-653.00	-652.00	-655.60
CAediting_230935	ENST00000345042.5	chr2_197486800_-	-652.00	-652.00	-655.60
CAediting_230936	ENST00000345042.5	chr2_197486811_-	-653.30	-652.00	-655.60
CAediting_230937	ENST00000345042.5	chr2_197487007_-	-653.60	-652.00	-655.60
CAediting_230934	ENST00000388968.6	chr2_197486772_-	-752.60	-752.50	-753.60
CAediting_230935	ENST00000388968.6	chr2_197486800_-	-751.80	-752.50	-753.60
CAediting_230936	ENST00000388968.6	chr2_197486811_-	-754.10	-752.50	-753.60
CAediting_230937	ENST00000388968.6	chr2_197487007_-	-752.90	-752.50	-753.60
CAediting_230960	ENST00000491249.1	chr2_197490572_-	-222.10	-222.20	-222.10
CAediting_231120	ENST00000461097.1	chr2_197496904_-	-219.40	-219.40	-221.50
CAediting_231121	ENST00000461097.1	chr2_197496906_-	-222.30	-219.40	-221.50

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Relation with ADAR for HSPD1

Correlation between ADAR gene expression and RNA editing frequency

Cancer	CAeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
ESCA	CAediting_231016	chr2_197491946_-	.	.	0.0139261794860218	0.220349416795029	.	.
LAML	CAediting_231016	chr2_197491946_-	0.0287388224954727	0.194138541783225	.	.	.	.
BRCA	CAediting_231023	chr2_197492001_-	0.0139436798899871	0.345664840148968	.	.	.	.
ESCA	CAediting_231023	chr2_197492001_-	.	.	0.00577497500795596	0.326695371867191	.	.
LUSC	CAediting_231084	chr2_197492465_-	.	.	0.0416765323580085	0.289166152974443	.	.

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Relation with cancer stages for HSPD1

Correlation between Cancer stages and RNA editing frequency

Cancer	Stage_type	CAeditomID	position	P-val	Coeff.
KIRC	pathologic_stage	CAediting_231011	chr2_197491921_-	0.00303414568271719	0.36485836139226
LUSC	pathologic_stage	CAediting_230966	chr2_197490657_-	0.0319321600608255	0.240105590461749
OV	clinical_stage	CAediting_230966	chr2_197490657_-	0.0428719660817869	0.266855771322946
STAD	pathologic_stage	CAediting_230966	chr2_197490657_-	0.0267758105524318	-0.241678271212227
STAD	pathologic_stage	CAediting_231011	chr2_197491921_-	0.0258698259891597	0.177827803727297
STAD	pathologic_stage	CAediting_231114	chr2_197495714_-	0.000580299501591411	0.474029901018923

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Relation with survival for HSPD1

Correlation between RNA editing and survival

Cancer	CAeditomID	position	KMpvalue	Coxpvalue	CoxHR
ESCA	CAediting_231114	chr2_197495714_-	0.0483977640799774	0.0410799	144.18

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RelatedDrugs for HSPD1

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene	UniProtAcc	DrugBank ID	Drug name	Drug activity	Drug type	Drug status
HSPD1	P10809	DB09130	Copper	60 kDa heat shock protein, mitochondrial	SmallMoleculeDrug	approved\|investigational

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RelatedDiseases for HSPD1

Diseases associated with this gene.
(DisGeNet 7.0)

Gene	Disease ID	Disease name	# pubmeds	Source
HSPD1	C1854467	Spastic paraplegia 13, autosomal dominant	4	CTD_human;GENOMICS_ENGLAND;ORPHANET;UNIPROT
HSPD1	C2677109	Leukodystrophy, Hypomyelinating, 4	4	CTD_human;GENOMICS_ENGLAND;ORPHANET;UNIPROT
HSPD1	C0024623	Malignant neoplasm of stomach	2	CTD_human
HSPD1	C0038356	Stomach Neoplasms	2	CTD_human
HSPD1	C1708349	Hereditary Diffuse Gastric Cancer	2	CTD_human
HSPD1	C0001418	Adenocarcinoma	1	CTD_human
HSPD1	C0007134	Renal Cell Carcinoma	1	CTD_human
HSPD1	C0007194	Hypertrophic Cardiomyopathy	1	CTD_human
HSPD1	C0019693	HIV Infections	1	CTD_human
HSPD1	C0033141	Cardiomyopathies, Primary	1	CTD_human
HSPD1	C0036529	Myocardial Diseases, Secondary	1	CTD_human
HSPD1	C0205641	Adenocarcinoma, Basal Cell	1	CTD_human
HSPD1	C0205642	Adenocarcinoma, Oxyphilic	1	CTD_human
HSPD1	C0205643	Carcinoma, Cribriform	1	CTD_human
HSPD1	C0205644	Carcinoma, Granular Cell	1	CTD_human
HSPD1	C0205645	Adenocarcinoma, Tubular	1	CTD_human
HSPD1	C0238281	Middle Cerebral Artery Syndrome	1	CTD_human
HSPD1	C0279702	Conventional (Clear Cell) Renal Cell Carcinoma	1	CTD_human
HSPD1	C0376618	Endotoxemia	1	CTD_human
HSPD1	C0740376	Middle Cerebral Artery Thrombosis	1	CTD_human
HSPD1	C0740391	Middle Cerebral Artery Occlusion	1	CTD_human
HSPD1	C0740392	Infarction, Middle Cerebral Artery	1	CTD_human
HSPD1	C0751845	Middle Cerebral Artery Embolus	1	CTD_human
HSPD1	C0751846	Left Middle Cerebral Artery Infarction	1	CTD_human
HSPD1	C0751847	Embolic Infarction, Middle Cerebral Artery	1	CTD_human
HSPD1	C0751848	Thrombotic Infarction, Middle Cerebral Artery	1	CTD_human
HSPD1	C0751849	Right Middle Cerebral Artery Infarction	1	CTD_human
HSPD1	C0878544	Cardiomyopathies	1	CTD_human
HSPD1	C0948089	Acute Coronary Syndrome	1	CTD_human
HSPD1	C1266042	Chromophobe Renal Cell Carcinoma	1	CTD_human
HSPD1	C1266043	Sarcomatoid Renal Cell Carcinoma	1	CTD_human
HSPD1	C1266044	Collecting Duct Carcinoma of the Kidney	1	CTD_human
HSPD1	C1306837	Papillary Renal Cell Carcinoma	1	CTD_human
HSPD1	C4505456	HIV Coinfection	1	CTD_human
HSPD1	C4551472	Hypertrophic obstructive cardiomyopathy	1	CTD_human

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene