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![]() | Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples |
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![]() | The effects of the RNA editing to the stability of the RNA structures |
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Editing gene: HSPA1L (CAeditome ID:3305) |
Gene summary for HSPA1L |
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Gene information | Gene symbol | HSPA1L | Gene ID | 3305 |
Gene name | heat shock protein family A (Hsp70) member 1 like | |
Synonyms | HSP70-1L|HSP70-HOM|HSP70T|hum70t | |
Cytomap | 6p21.33 | |
Type of gene | protein-coding | |
Description | heat shock 70 kDa protein 1-likeepididymis secretory sperm binding proteinheat shock 10kDa protein 1-likeheat shock 70 kDa protein 1-Homheat shock 70 kDa protein 1Lheat shock 70kD protein-like 1heat shock 70kDa protein 1-like | |
Modification date | 20210518 | |
UniProtAcc | P34931 | |
Context |
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Gene | GO ID | GO term | PubMed ID |
HSPA1L | GO:0051082 | Heat shock 70 kDa protein 1-like | 21231916 |
HSPA1L | GO:0042026 | Heat shock 70 kDa protein 1-like | 21231916 |
HSPA1L | GO:0005829 | Heat shock 70 kDa protein 1-like | 21231916 |
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RNA A-to-I events for HSPA1L |
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CAediting_468970(31810299, -), CAediting_468971(31810338, -), CAediting_468972(31810341, -), CAediting_468973(31810352, -), CAediting_468974(31810363, -), CAediting_468975(31810383, -), CAediting_468976(31810389, -), CAediting_468977(31810396, -), CAediting_468978(31810432, -), CAediting_468979(31810433, -), CAediting_468980(31810447, -), CAediting_468981(31810666, -), CAediting_468982(31810836, -), CAediting_468983(31810839, -), CAediting_468984(31811484, -), CAediting_468985(31811491, -), CAediting_468986(31811516, -), CAediting_468987(31811526, -), CAediting_468988(31811541, -), CAediting_468989(31811549, -), CAediting_468990(31811557, -), |
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RNA editing positional annotations for HSPA1L using Annovar |
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CAeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
CAediting_468973 | chr6_31810352_- | nonsynonymous SNV | ENST00000375654.4 | c.A1621G | p.K541E | D | D | D |
CAediting_468978 | chr6_31810432_- | nonsynonymous SNV | ENST00000375654.4 | c.A1541G | p.K514R | D | D | N |
CAediting_468979 | chr6_31810433_- | nonsynonymous SNV | ENST00000375654.4 | c.A1540G | p.K514E | D | D | D |
CAediting_468980 | chr6_31810447_- | nonsynonymous SNV | ENST00000375654.4 | c.A1526G | p.K509R | D | D | N |
CAediting_468981 | chr6_31810666_- | nonsynonymous SNV | ENST00000375654.4 | c.A1307G | p.N436S | D | D | D |
CAediting_468985 | chr6_31811491_- | nonsynonymous SNV | ENST00000375654.4 | c.A482G | p.K161R | D | D | N |
CAediting_468986 | chr6_31811516_- | nonsynonymous SNV | ENST00000375654.4 | c.A457G | p.N153D | D | D | D |
CAediting_468989 | chr6_31811549_- | nonsynonymous SNV | ENST00000375654.4 | c.A424G | p.T142A | D | B | N |
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CAeditome ID | Position | Variant type |
CAediting_468970 | chr6_31810299_- | exonic |
CAediting_468971 | chr6_31810338_- | exonic |
CAediting_468972 | chr6_31810341_- | exonic |
CAediting_468973 | chr6_31810352_- | exonic |
CAediting_468974 | chr6_31810363_- | exonic |
CAediting_468975 | chr6_31810383_- | exonic |
CAediting_468976 | chr6_31810389_- | exonic |
CAediting_468977 | chr6_31810396_- | exonic |
CAediting_468978 | chr6_31810432_- | exonic |
CAediting_468979 | chr6_31810433_- | exonic |
CAediting_468980 | chr6_31810447_- | exonic |
CAediting_468981 | chr6_31810666_- | exonic |
CAediting_468982 | chr6_31810836_- | exonic |
CAediting_468983 | chr6_31810839_- | exonic |
CAediting_468984 | chr6_31811484_- | exonic |
CAediting_468985 | chr6_31811491_- | exonic |
CAediting_468986 | chr6_31811516_- | exonic |
CAediting_468987 | chr6_31811526_- | exonic |
CAediting_468988 | chr6_31811541_- | exonic |
CAediting_468989 | chr6_31811549_- | exonic |
CAediting_468990 | chr6_31811557_- | exonic |
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CAeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
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RNA A-to-I editing events in the alternative splicing sites for HSPA1L |
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AStype | CAeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
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Differntial gene expression between RNA A-to-I edited versus non-edited samples for HSPA1L |
![]() * The grey color means N/A. |
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Protein coding region RNA A-to-I editings for HSPA1L |
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The effects of the RNA editing to the miRNA binding sites for HSPA1L |
**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page. |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
CAediting_1054808 | chr15_66496985_- | ENSG00000204390.9 | ENST00000375654 | hsa-miR-4512 | 31809843 | 31809849 | 7mer-m8 | 31809842 | 31809862 | 143 | -15.94 |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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The effects of the RNA editing to the stability of the RNA structures for HSPA1L |
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ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
ENST00000375654.4 | protein_coding | ![]() | ![]() |
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CAeditom_ID | ENST | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
CAediting_468970 | ENST00000375654.4 | chr6_31810299_- | -858.10 | -853.00 | -874.80 |
CAediting_468971 | ENST00000375654.4 | chr6_31810338_- | -852.10 | -853.00 | -874.80 |
CAediting_468972 | ENST00000375654.4 | chr6_31810341_- | -852.80 | -853.00 | -874.80 |
CAediting_468973 | ENST00000375654.4 | chr6_31810352_- | -853.00 | -853.00 | -874.80 |
CAediting_468974 | ENST00000375654.4 | chr6_31810363_- | -853.00 | -853.00 | -874.80 |
CAediting_468975 | ENST00000375654.4 | chr6_31810383_- | -853.10 | -853.00 | -874.80 |
CAediting_468976 | ENST00000375654.4 | chr6_31810389_- | -852.60 | -853.00 | -874.80 |
CAediting_468977 | ENST00000375654.4 | chr6_31810396_- | -853.00 | -853.00 | -874.80 |
CAediting_468978 | ENST00000375654.4 | chr6_31810432_- | -855.00 | -853.00 | -874.80 |
CAediting_468979 | ENST00000375654.4 | chr6_31810433_- | -853.00 | -853.00 | -874.80 |
CAediting_468980 | ENST00000375654.4 | chr6_31810447_- | -852.70 | -853.00 | -874.80 |
CAediting_468981 | ENST00000375654.4 | chr6_31810666_- | -855.40 | -853.00 | -874.80 |
CAediting_468982 | ENST00000375654.4 | chr6_31810836_- | -852.80 | -853.00 | -874.80 |
CAediting_468983 | ENST00000375654.4 | chr6_31810839_- | -856.60 | -853.00 | -874.80 |
CAediting_468984 | ENST00000375654.4 | chr6_31811484_- | -855.10 | -853.00 | -874.80 |
CAediting_468985 | ENST00000375654.4 | chr6_31811491_- | -854.40 | -853.00 | -874.80 |
CAediting_468986 | ENST00000375654.4 | chr6_31811516_- | -854.70 | -853.00 | -874.80 |
CAediting_468987 | ENST00000375654.4 | chr6_31811526_- | -854.60 | -853.00 | -874.80 |
CAediting_468988 | ENST00000375654.4 | chr6_31811541_- | -853.00 | -853.00 | -874.80 |
CAediting_468989 | ENST00000375654.4 | chr6_31811549_- | -855.20 | -853.00 | -874.80 |
CAediting_468990 | ENST00000375654.4 | chr6_31811557_- | -854.00 | -853.00 | -874.80 |
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Relation with ADAR for HSPA1L |
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Cancer | CAeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
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Relation with cancer stages for HSPA1L |
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Cancer | Stage_type | CAeditomID | position | P-val | Coeff. |
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Relation with survival for HSPA1L |
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Cancer | CAeditomID | position | KMpvalue | Coxpvalue | CoxHR |
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RelatedDrugs for HSPA1L |
![]() (DrugBank Version 5.1.8 2021-01-03) |
Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for HSPA1L |
![]() (DisGeNet 7.0) |
Gene | Disease ID | Disease name | # pubmeds | Source |
HSPA1L | C0036341 | Schizophrenia | 4 | PSYGENET |
HSPA1L | C0013182 | Drug Allergy | 1 | CTD_human |
HSPA1L | C0024517 | Major depression, single episode | 1 | PSYGENET |
HSPA1L | C0041696 | Unipolar Depression | 1 | PSYGENET |
HSPA1L | C1269683 | Major Depressive Disorder | 1 | PSYGENET |