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![]() | Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples |
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![]() | The effects of the RNA editing to the stability of the RNA structures |
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Editing gene: HSF1 (CAeditome ID:3297) |
Gene summary for HSF1 |
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Gene information | Gene symbol | HSF1 | Gene ID | 3297 |
Gene name | heat shock transcription factor 1 | |
Synonyms | HSTF1 | |
Cytomap | 8q24.3 | |
Type of gene | protein-coding | |
Description | heat shock factor protein 1 | |
Modification date | 20210531 | |
UniProtAcc | Q00613 | |
Context |
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Gene | GO ID | GO term | PubMed ID |
HSF1 | GO:0045944 | Heat shock factor protein 1 | 10561509 |
HSF1 | GO:0000976 | Heat shock factor protein 1 | 24504023 |
HSF1 | GO:0000978 | Heat shock factor protein 1 | 8926278 |
HSF1 | GO:0000978 | Heat shock factor protein 1 | 8972228 |
HSF1 | GO:0000981 | Heat shock factor protein 1 | 24504023 |
HSF1 | GO:0001162 | Heat shock factor protein 1 | 10561509 |
HSF1 | GO:0001227 | Heat shock factor protein 1 | 8926278 |
HSF1 | GO:0003677 | Heat shock factor protein 1 | 10359787 |
HSF1 | GO:0003677 | Heat shock factor protein 1 | 10413683 |
HSF1 | GO:0003677 | Heat shock factor protein 1 | 10747973 |
HSF1 | GO:0003677 | Heat shock factor protein 1 | 11514557 |
HSF1 | GO:0003677 | Heat shock factor protein 1 | 11583998 |
HSF1 | GO:0003677 | Heat shock factor protein 1 | 12659875 |
HSF1 | GO:0003677 | Heat shock factor protein 1 | 12665592 |
HSF1 | GO:0003677 | Heat shock factor protein 1 | 12917326 |
HSF1 | GO:0003677 | Heat shock factor protein 1 | 16278218 |
HSF1 | GO:0003677 | Heat shock factor protein 1 | 16554823 |
HSF1 | GO:0003677 | Heat shock factor protein 1 | 26754925 |
HSF1 | GO:0003677 | Heat shock factor protein 1 | 7760831 |
HSF1 | GO:0003677 | Heat shock factor protein 1 | 7935471 |
HSF1 | GO:0003677 | Heat shock factor protein 1 | 8455624 |
HSF1 | GO:0003677 | Heat shock factor protein 1 | 9222587 |
HSF1 | GO:0003677 | Heat shock factor protein 1 | 9341107 |
HSF1 | GO:0003677 | Heat shock factor protein 1 | 9499401 |
HSF1 | GO:0003677 | Heat shock factor protein 1 | 9727490 |
HSF1 | GO:0031072 | Heat shock factor protein 1 | 11583998 |
HSF1 | GO:0031072 | Heat shock factor protein 1 | 16278218 |
HSF1 | GO:0031072 | Heat shock factor protein 1 | 9727490 |
HSF1 | GO:0031490 | Heat shock factor protein 1 | 21085490 |
HSF1 | GO:0042802 | Heat shock factor protein 1 | 11583998 |
HSF1 | GO:0042802 | Heat shock factor protein 1 | 16554823 |
HSF1 | GO:0042802 | Heat shock factor protein 1 | 26754925 |
HSF1 | GO:0042802 | Heat shock factor protein 1 | 7935471 |
HSF1 | GO:0042802 | Heat shock factor protein 1 | 9222587 |
HSF1 | GO:0042802 | Heat shock factor protein 1 | 9727490 |
HSF1 | GO:0043565 | Heat shock factor protein 1 | 25963659 |
HSF1 | GO:0043621 | Heat shock factor protein 1 | 7935471 |
HSF1 | GO:0046982 | Heat shock factor protein 1 | 9222587 |
HSF1 | GO:0051879 | Heat shock factor protein 1 | 11583998 |
HSF1 | GO:0061770 | Heat shock factor protein 1 | 16554823 |
HSF1 | GO:1990837 | Heat shock factor protein 1 | 28473536 |
HSF1 | GO:1990841 | Heat shock factor protein 1 | 25963659 |
HSF1 | GO:0000122 | Heat shock factor protein 1 | 8926278 |
HSF1 | GO:0000122 | Heat shock factor protein 1 | 9341107 |
HSF1 | GO:0000165 | Heat shock factor protein 1 | 12917326 |
HSF1 | GO:0009299 | Heat shock factor protein 1 | 21597468 |
HSF1 | GO:0034605 | Heat shock factor protein 1 | 10359787 |
HSF1 | GO:0034605 | Heat shock factor protein 1 | 10413683 |
HSF1 | GO:0034605 | Heat shock factor protein 1 | 10747973 |
HSF1 | GO:0034605 | Heat shock factor protein 1 | 11514557 |
HSF1 | GO:0034605 | Heat shock factor protein 1 | 11583998 |
HSF1 | GO:0034605 | Heat shock factor protein 1 | 12917326 |
HSF1 | GO:0034605 | Heat shock factor protein 1 | 14707147 |
HSF1 | GO:0034605 | Heat shock factor protein 1 | 16554823 |
HSF1 | GO:0034605 | Heat shock factor protein 1 | 17897941 |
HSF1 | GO:0034605 | Heat shock factor protein 1 | 21085490 |
HSF1 | GO:0034605 | Heat shock factor protein 1 | 26159920 |
HSF1 | GO:0034605 | Heat shock factor protein 1 | 7935471 |
HSF1 | GO:0034605 | Heat shock factor protein 1 | 9222587 |
HSF1 | GO:0034605 | Heat shock factor protein 1 | 9341107 |
HSF1 | GO:0034620 | Heat shock factor protein 1 | 15016915 |
HSF1 | GO:0034622 | Heat shock factor protein 1 | 11583998 |
HSF1 | GO:0045944 | Heat shock factor protein 1 | 11514557 |
HSF1 | GO:0045944 | Heat shock factor protein 1 | 12917326 |
HSF1 | GO:0045944 | Heat shock factor protein 1 | 16278218 |
HSF1 | GO:0045944 | Heat shock factor protein 1 | 21085490 |
HSF1 | GO:0045944 | Heat shock factor protein 1 | 24504023 |
HSF1 | GO:0045944 | Heat shock factor protein 1 | 9341107 |
HSF1 | GO:0061408 | Heat shock factor protein 1 | 10747973 |
HSF1 | GO:0061408 | Heat shock factor protein 1 | 12659875 |
HSF1 | GO:0061408 | Heat shock factor protein 1 | 12665592 |
HSF1 | GO:0061408 | Heat shock factor protein 1 | 15016915 |
HSF1 | GO:0061408 | Heat shock factor protein 1 | 25963659 |
HSF1 | GO:0061408 | Heat shock factor protein 1 | 26754925 |
HSF1 | GO:0061408 | Heat shock factor protein 1 | 7760831 |
HSF1 | GO:0061408 | Heat shock factor protein 1 | 9499401 |
HSF1 | GO:0071276 | Heat shock factor protein 1 | 10359787 |
HSF1 | GO:0071276 | Heat shock factor protein 1 | 11514557 |
HSF1 | GO:0071276 | Heat shock factor protein 1 | 15016915 |
HSF1 | GO:0071276 | Heat shock factor protein 1 | 25963659 |
HSF1 | GO:0071280 | Heat shock factor protein 1 | 15016915 |
HSF1 | GO:0071480 | Heat shock factor protein 1 | 26359349 |
HSF1 | GO:0072738 | Heat shock factor protein 1 | 15016915 |
HSF1 | GO:1900034 | Heat shock factor protein 1 | 11583998 |
HSF1 | GO:1903936 | Heat shock factor protein 1 | 15016915 |
HSF1 | GO:0000776 | Heat shock factor protein 1 | 18794143 |
HSF1 | GO:0005634 | Heat shock factor protein 1 | 10413683 |
HSF1 | GO:0005634 | Heat shock factor protein 1 | 10747973 |
HSF1 | GO:0005634 | Heat shock factor protein 1 | 12665592 |
HSF1 | GO:0005634 | Heat shock factor protein 1 | 12917326 |
HSF1 | GO:0005634 | Heat shock factor protein 1 | 14707147 |
HSF1 | GO:0005634 | Heat shock factor protein 1 | 21085490 |
HSF1 | GO:0005634 | Heat shock factor protein 1 | 25963659 |
HSF1 | GO:0005634 | Heat shock factor protein 1 | 26159920 |
HSF1 | GO:0005634 | Heat shock factor protein 1 | 8455624 |
HSF1 | GO:0005634 | Heat shock factor protein 1 | 9341107 |
HSF1 | GO:0005654 | Heat shock factor protein 1 | 0000052 |
HSF1 | GO:0005654 | Heat shock factor protein 1 | 10359787 |
HSF1 | GO:0005737 | Heat shock factor protein 1 | 10413683 |
HSF1 | GO:0005737 | Heat shock factor protein 1 | 10747973 |
HSF1 | GO:0005737 | Heat shock factor protein 1 | 12917326 |
HSF1 | GO:0005737 | Heat shock factor protein 1 | 21085490 |
HSF1 | GO:0005737 | Heat shock factor protein 1 | 26159920 |
HSF1 | GO:0005737 | Heat shock factor protein 1 | 8455624 |
HSF1 | GO:0005813 | Heat shock factor protein 1 | 18794143 |
HSF1 | GO:0005829 | Heat shock factor protein 1 | 0000052 |
HSF1 | GO:0016605 | Heat shock factor protein 1 | 11514557 |
HSF1 | GO:0048471 | Heat shock factor protein 1 | 21085490 |
HSF1 | GO:0097165 | Heat shock factor protein 1 | 10359787 |
HSF1 | GO:0097165 | Heat shock factor protein 1 | 10747973 |
HSF1 | GO:0097165 | Heat shock factor protein 1 | 11514557 |
HSF1 | GO:0097165 | Heat shock factor protein 1 | 12665592 |
HSF1 | GO:0097165 | Heat shock factor protein 1 | 14707147 |
HSF1 | GO:0097165 | Heat shock factor protein 1 | 25963659 |
HSF1 | GO:0097431 | Heat shock factor protein 1 | 18794143 |
HSF1 | GO:0101031 | Heat shock factor protein 1 | 8455624 |
HSF1 | GO:1990904 | Heat shock factor protein 1 | 16554823 |
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RNA A-to-I events for HSF1 |
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CAediting_671557(144292684, +), CAediting_671558(144292705, +), CAediting_671559(144292706, +), CAediting_671560(144292711, +), CAediting_671561(144292741, +), CAediting_671562(144292746, +), CAediting_671563(144292751, +), CAediting_671564(144292765, +), CAediting_671565(144292775, +), CAediting_671566(144292777, +), CAediting_671567(144292782, +), CAediting_671568(144292783, +), CAediting_671569(144292784, +), CAediting_671570(144292785, +), CAediting_671571(144292790, +), CAediting_671572(144292799, +), CAediting_671573(144292800, +), CAediting_671574(144292802, +), CAediting_671575(144292805, +), CAediting_671576(144292847, +), CAediting_671577(144292851, +), CAediting_671578(144292864, +), CAediting_671579(144292866, +), CAediting_671580(144292871, +), CAediting_671581(144292894, +), CAediting_671582(144292907, +), CAediting_671583(144292908, +), CAediting_671584(144292912, +), CAediting_671585(144292937, +), CAediting_671586(144292955, +), CAediting_671587(144292963, +), CAediting_671588(144292964, +), CAediting_671589(144292966, +), CAediting_671590(144293480, +), CAediting_671591(144293491, +), CAediting_671592(144293515, +), CAediting_671593(144293567, +), CAediting_671594(144293571, +), CAediting_671595(144293577, +), CAediting_671596(144293593, +), CAediting_671597(144293595, +), CAediting_671598(144293618, +), CAediting_671599(144293635, +), CAediting_671600(144293638, +), CAediting_671601(144293647, +), CAediting_671602(144293700, +), CAediting_671603(144293712, +), CAediting_671604(144295573, +), CAediting_671605(144295577, +), CAediting_671606(144295578, +), CAediting_671607(144295623, +), CAediting_671608(144295633, +), CAediting_671609(144295647, +), CAediting_671610(144296544, +), CAediting_671611(144296549, +), CAediting_671612(144296604, +), CAediting_671613(144296619, +), CAediting_671614(144296629, +), CAediting_671615(144296653, +), CAediting_671616(144296660, +), CAediting_671617(144296686, +), CAediting_671618(144296692, +), CAediting_671619(144296696, +), CAediting_671620(144296713, +), CAediting_671621(144296728, +), CAediting_671622(144296732, +), CAediting_671623(144296748, +), CAediting_671624(144296752, +), CAediting_671625(144296757, +), CAediting_671626(144296759, +), CAediting_671627(144296777, +), CAediting_671628(144298342, +), CAediting_671629(144298410, +), CAediting_671630(144298484, +), CAediting_671631(144298485, +), CAediting_671632(144298490, +), CAediting_671633(144298494, +), CAediting_671634(144298501, +), CAediting_671635(144298520, +), CAediting_671636(144298526, +), CAediting_671637(144298535, +), CAediting_671638(144298550, +), CAediting_671639(144298613, +), CAediting_671640(144298615, +), CAediting_671641(144299164, +), CAediting_671642(144299187, +), CAediting_671643(144299213, +), CAediting_671644(144299232, +), CAediting_671645(144299235, +), CAediting_671646(144299240, +), CAediting_671647(144299241, +), CAediting_671648(144299246, +), CAediting_671649(144299255, +), CAediting_671650(144299290, +), CAediting_671651(144299304, +), CAediting_671652(144299322, +), CAediting_671653(144299326, +), CAediting_671654(144299344, +), CAediting_671655(144299352, +), CAediting_671656(144299357, +), CAediting_671657(144299369, +), CAediting_671658(144299378, +), CAediting_671659(144299382, +), CAediting_671660(144299387, +), CAediting_671661(144299394, +), CAediting_671662(144299424, +), CAediting_671663(144300402, +), CAediting_671664(144301272, +), CAediting_671665(144301305, +), CAediting_671666(144301339, +), CAediting_671667(144301980, +), CAediting_671668(144302001, +), CAediting_671669(144302045, +), CAediting_671670(144302559, +), CAediting_671671(144302632, +), CAediting_671672(144302747, +), CAediting_671673(144303622, +), CAediting_671674(144303623, +), CAediting_671675(144303676, +), CAediting_671676(144303702, +), CAediting_671677(144303731, +), CAediting_671678(144303771, +), CAediting_671679(144303775, +), CAediting_671680(144304463, +), CAediting_671681(144304542, +), CAediting_671682(144304695, +), CAediting_671683(144304724, +), CAediting_671684(144304824, +), CAediting_671685(144304827, +), CAediting_671686(144305429, +), CAediting_671687(144305562, +), CAediting_671688(144305563, +), CAediting_671689(144306421, +), CAediting_671690(144306463, +), CAediting_671691(144306480, +), CAediting_671692(144306548, +), CAediting_671693(144306563, +), CAediting_671694(144306572, +), CAediting_671695(144306577, +), CAediting_671696(144306585, +), CAediting_671697(144306592, +), CAediting_671698(144306602, +), CAediting_671699(144306606, +), CAediting_671700(144306624, +), CAediting_671701(144306625, +), CAediting_671702(144306647, +), CAediting_671703(144306655, +), CAediting_671704(144307466, +), CAediting_671705(144307468, +), CAediting_671706(144307484, +), CAediting_671707(144307485, +), CAediting_671708(144307506, +), CAediting_671709(144307544, +), CAediting_671710(144307556, +), CAediting_671711(144307569, +), CAediting_671712(144307579, +), CAediting_671713(144307584, +), CAediting_671714(144307586, +), CAediting_671715(144307590, +), CAediting_671716(144307615, +), CAediting_671717(144307619, +), CAediting_671718(144307623, +), CAediting_671719(144307640, +), CAediting_671720(144307655, +), CAediting_671721(144310316, +), |
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RNA editing positional annotations for HSF1 using Annovar |
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CAeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
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CAeditome ID | Position | Variant type |
CAediting_671557 | chr8_144292684_+ | intronic |
CAediting_671558 | chr8_144292705_+ | intronic |
CAediting_671559 | chr8_144292706_+ | intronic |
CAediting_671560 | chr8_144292711_+ | intronic |
CAediting_671561 | chr8_144292741_+ | intronic |
CAediting_671562 | chr8_144292746_+ | intronic |
CAediting_671563 | chr8_144292751_+ | intronic |
CAediting_671564 | chr8_144292765_+ | intronic |
CAediting_671565 | chr8_144292775_+ | intronic |
CAediting_671566 | chr8_144292777_+ | intronic |
CAediting_671567 | chr8_144292782_+ | intronic |
CAediting_671568 | chr8_144292783_+ | intronic |
CAediting_671569 | chr8_144292784_+ | intronic |
CAediting_671570 | chr8_144292785_+ | intronic |
CAediting_671571 | chr8_144292790_+ | intronic |
CAediting_671572 | chr8_144292799_+ | intronic |
CAediting_671573 | chr8_144292800_+ | intronic |
CAediting_671574 | chr8_144292802_+ | intronic |
CAediting_671575 | chr8_144292805_+ | intronic |
CAediting_671576 | chr8_144292847_+ | intronic |
CAediting_671577 | chr8_144292851_+ | intronic |
CAediting_671578 | chr8_144292864_+ | intronic |
CAediting_671579 | chr8_144292866_+ | intronic |
CAediting_671580 | chr8_144292871_+ | intronic |
CAediting_671581 | chr8_144292894_+ | intronic |
CAediting_671582 | chr8_144292907_+ | intronic |
CAediting_671583 | chr8_144292908_+ | intronic |
CAediting_671584 | chr8_144292912_+ | intronic |
CAediting_671585 | chr8_144292937_+ | intronic |
CAediting_671586 | chr8_144292955_+ | intronic |
CAediting_671587 | chr8_144292963_+ | intronic |
CAediting_671588 | chr8_144292964_+ | intronic |
CAediting_671589 | chr8_144292966_+ | intronic |
CAediting_671590 | chr8_144293480_+ | UTR3 |
CAediting_671591 | chr8_144293491_+ | UTR3 |
CAediting_671592 | chr8_144293515_+ | UTR3 |
CAediting_671593 | chr8_144293567_+ | UTR3 |
CAediting_671594 | chr8_144293571_+ | UTR3 |
CAediting_671595 | chr8_144293577_+ | UTR3 |
CAediting_671596 | chr8_144293593_+ | intronic |
CAediting_671597 | chr8_144293595_+ | intronic |
CAediting_671598 | chr8_144293618_+ | intronic |
CAediting_671599 | chr8_144293635_+ | intronic |
CAediting_671600 | chr8_144293638_+ | intronic |
CAediting_671601 | chr8_144293647_+ | intronic |
CAediting_671602 | chr8_144293700_+ | intronic |
CAediting_671603 | chr8_144293712_+ | intronic |
CAediting_671604 | chr8_144295573_+ | intronic |
CAediting_671605 | chr8_144295577_+ | intronic |
CAediting_671606 | chr8_144295578_+ | intronic |
CAediting_671607 | chr8_144295623_+ | intronic |
CAediting_671608 | chr8_144295633_+ | intronic |
CAediting_671609 | chr8_144295647_+ | intronic |
CAediting_671610 | chr8_144296544_+ | intronic |
CAediting_671611 | chr8_144296549_+ | intronic |
CAediting_671612 | chr8_144296604_+ | intronic |
CAediting_671613 | chr8_144296619_+ | intronic |
CAediting_671614 | chr8_144296629_+ | intronic |
CAediting_671615 | chr8_144296653_+ | intronic |
CAediting_671616 | chr8_144296660_+ | intronic |
CAediting_671617 | chr8_144296686_+ | intronic |
CAediting_671618 | chr8_144296692_+ | intronic |
CAediting_671619 | chr8_144296696_+ | intronic |
CAediting_671620 | chr8_144296713_+ | intronic |
CAediting_671621 | chr8_144296728_+ | intronic |
CAediting_671622 | chr8_144296732_+ | intronic |
CAediting_671623 | chr8_144296748_+ | intronic |
CAediting_671624 | chr8_144296752_+ | intronic |
CAediting_671625 | chr8_144296757_+ | intronic |
CAediting_671626 | chr8_144296759_+ | intronic |
CAediting_671627 | chr8_144296777_+ | intronic |
CAediting_671628 | chr8_144298342_+ | intronic |
CAediting_671629 | chr8_144298410_+ | intronic |
CAediting_671630 | chr8_144298484_+ | intronic |
CAediting_671631 | chr8_144298485_+ | intronic |
CAediting_671632 | chr8_144298490_+ | intronic |
CAediting_671633 | chr8_144298494_+ | intronic |
CAediting_671634 | chr8_144298501_+ | intronic |
CAediting_671635 | chr8_144298520_+ | intronic |
CAediting_671636 | chr8_144298526_+ | intronic |
CAediting_671637 | chr8_144298535_+ | intronic |
CAediting_671638 | chr8_144298550_+ | intronic |
CAediting_671639 | chr8_144298613_+ | intronic |
CAediting_671640 | chr8_144298615_+ | intronic |
CAediting_671641 | chr8_144299164_+ | intronic |
CAediting_671642 | chr8_144299187_+ | intronic |
CAediting_671643 | chr8_144299213_+ | intronic |
CAediting_671644 | chr8_144299232_+ | intronic |
CAediting_671645 | chr8_144299235_+ | intronic |
CAediting_671646 | chr8_144299240_+ | intronic |
CAediting_671647 | chr8_144299241_+ | intronic |
CAediting_671648 | chr8_144299246_+ | intronic |
CAediting_671649 | chr8_144299255_+ | intronic |
CAediting_671650 | chr8_144299290_+ | intronic |
CAediting_671651 | chr8_144299304_+ | intronic |
CAediting_671652 | chr8_144299322_+ | intronic |
CAediting_671653 | chr8_144299326_+ | intronic |
CAediting_671654 | chr8_144299344_+ | intronic |
CAediting_671655 | chr8_144299352_+ | intronic |
CAediting_671656 | chr8_144299357_+ | intronic |
CAediting_671657 | chr8_144299369_+ | intronic |
CAediting_671658 | chr8_144299378_+ | intronic |
CAediting_671659 | chr8_144299382_+ | intronic |
CAediting_671660 | chr8_144299387_+ | intronic |
CAediting_671661 | chr8_144299394_+ | intronic |
CAediting_671662 | chr8_144299424_+ | intronic |
CAediting_671663 | chr8_144300402_+ | intronic |
CAediting_671664 | chr8_144301272_+ | intronic |
CAediting_671665 | chr8_144301305_+ | intronic |
CAediting_671666 | chr8_144301339_+ | intronic |
CAediting_671667 | chr8_144301980_+ | intronic |
CAediting_671668 | chr8_144302001_+ | intronic |
CAediting_671669 | chr8_144302045_+ | intronic |
CAediting_671670 | chr8_144302559_+ | intronic |
CAediting_671671 | chr8_144302632_+ | intronic |
CAediting_671672 | chr8_144302747_+ | intronic |
CAediting_671673 | chr8_144303622_+ | intronic |
CAediting_671674 | chr8_144303623_+ | intronic |
CAediting_671675 | chr8_144303676_+ | intronic |
CAediting_671676 | chr8_144303702_+ | intronic |
CAediting_671677 | chr8_144303731_+ | intronic |
CAediting_671678 | chr8_144303771_+ | intronic |
CAediting_671679 | chr8_144303775_+ | intronic |
CAediting_671680 | chr8_144304463_+ | intronic |
CAediting_671681 | chr8_144304542_+ | intronic |
CAediting_671682 | chr8_144304695_+ | intronic |
CAediting_671683 | chr8_144304724_+ | intronic |
CAediting_671684 | chr8_144304824_+ | intronic |
CAediting_671685 | chr8_144304827_+ | intronic |
CAediting_671686 | chr8_144305429_+ | intronic |
CAediting_671687 | chr8_144305562_+ | intronic |
CAediting_671688 | chr8_144305563_+ | intronic |
CAediting_671689 | chr8_144306421_+ | intronic |
CAediting_671690 | chr8_144306463_+ | intronic |
CAediting_671691 | chr8_144306480_+ | intronic |
CAediting_671692 | chr8_144306548_+ | intronic |
CAediting_671693 | chr8_144306563_+ | intronic |
CAediting_671694 | chr8_144306572_+ | intronic |
CAediting_671695 | chr8_144306577_+ | intronic |
CAediting_671696 | chr8_144306585_+ | intronic |
CAediting_671697 | chr8_144306592_+ | intronic |
CAediting_671698 | chr8_144306602_+ | intronic |
CAediting_671699 | chr8_144306606_+ | intronic |
CAediting_671700 | chr8_144306624_+ | intronic |
CAediting_671701 | chr8_144306625_+ | intronic |
CAediting_671702 | chr8_144306647_+ | intronic |
CAediting_671703 | chr8_144306655_+ | intronic |
CAediting_671704 | chr8_144307466_+ | intronic |
CAediting_671705 | chr8_144307468_+ | intronic |
CAediting_671706 | chr8_144307484_+ | intronic |
CAediting_671707 | chr8_144307485_+ | intronic |
CAediting_671708 | chr8_144307506_+ | intronic |
CAediting_671709 | chr8_144307544_+ | intronic |
CAediting_671710 | chr8_144307556_+ | intronic |
CAediting_671711 | chr8_144307569_+ | intronic |
CAediting_671712 | chr8_144307579_+ | intronic |
CAediting_671713 | chr8_144307584_+ | intronic |
CAediting_671714 | chr8_144307586_+ | intronic |
CAediting_671715 | chr8_144307590_+ | intronic |
CAediting_671716 | chr8_144307615_+ | intronic |
CAediting_671717 | chr8_144307619_+ | intronic |
CAediting_671718 | chr8_144307623_+ | intronic |
CAediting_671719 | chr8_144307640_+ | intronic |
CAediting_671720 | chr8_144307655_+ | intronic |
CAediting_671721 | chr8_144310316_+ | ncRNA_exonic |
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CAeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
CAediting_671557 | chr8_144292684_+ | SINE | Alu | AluSz6 |
CAediting_671558 | chr8_144292705_+ | SINE | Alu | AluSz6 |
CAediting_671559 | chr8_144292706_+ | SINE | Alu | AluSz6 |
CAediting_671560 | chr8_144292711_+ | SINE | Alu | AluSz6 |
CAediting_671561 | chr8_144292741_+ | SINE | Alu | AluSz6 |
CAediting_671562 | chr8_144292746_+ | SINE | Alu | AluSz6 |
CAediting_671563 | chr8_144292751_+ | SINE | Alu | AluSz6 |
CAediting_671564 | chr8_144292765_+ | SINE | Alu | AluSz6 |
CAediting_671565 | chr8_144292775_+ | SINE | Alu | AluSz6 |
CAediting_671566 | chr8_144292777_+ | SINE | Alu | AluSz6 |
CAediting_671567 | chr8_144292782_+ | SINE | Alu | AluSz6 |
CAediting_671568 | chr8_144292783_+ | SINE | Alu | AluSz6 |
CAediting_671569 | chr8_144292784_+ | SINE | Alu | AluSz6 |
CAediting_671570 | chr8_144292785_+ | SINE | Alu | AluSz6 |
CAediting_671571 | chr8_144292790_+ | SINE | Alu | AluSz6 |
CAediting_671572 | chr8_144292799_+ | SINE | Alu | AluSz6 |
CAediting_671573 | chr8_144292800_+ | SINE | Alu | AluSz6 |
CAediting_671574 | chr8_144292802_+ | SINE | Alu | AluSz6 |
CAediting_671575 | chr8_144292805_+ | SINE | Alu | AluSz6 |
CAediting_671576 | chr8_144292847_+ | SINE | Alu | AluSz6 |
CAediting_671577 | chr8_144292851_+ | SINE | Alu | AluSz6 |
CAediting_671578 | chr8_144292864_+ | SINE | Alu | AluSz6 |
CAediting_671579 | chr8_144292866_+ | SINE | Alu | AluSz6 |
CAediting_671580 | chr8_144292871_+ | SINE | Alu | AluSz6 |
CAediting_671581 | chr8_144292894_+ | SINE | Alu | AluSz6 |
CAediting_671582 | chr8_144292907_+ | SINE | Alu | AluSz6 |
CAediting_671583 | chr8_144292908_+ | SINE | Alu | AluSz6 |
CAediting_671584 | chr8_144292912_+ | SINE | Alu | AluSz6 |
CAediting_671585 | chr8_144292937_+ | SINE | Alu | AluSz6 |
CAediting_671586 | chr8_144292955_+ | SINE | Alu | AluSz6 |
CAediting_671587 | chr8_144292963_+ | SINE | Alu | AluSz6 |
CAediting_671588 | chr8_144292964_+ | SINE | Alu | AluSz6 |
CAediting_671589 | chr8_144292966_+ | SINE | Alu | AluSz6 |
CAediting_671590 | chr8_144293480_+ | SINE | Alu | AluSz |
CAediting_671591 | chr8_144293491_+ | SINE | Alu | AluSz |
CAediting_671592 | chr8_144293515_+ | SINE | Alu | AluSz |
CAediting_671593 | chr8_144293567_+ | SINE | Alu | AluSz |
CAediting_671594 | chr8_144293571_+ | SINE | Alu | AluSz |
CAediting_671595 | chr8_144293577_+ | SINE | Alu | AluSz |
CAediting_671596 | chr8_144293593_+ | SINE | Alu | AluSz |
CAediting_671597 | chr8_144293595_+ | SINE | Alu | AluSz |
CAediting_671598 | chr8_144293618_+ | SINE | Alu | AluSz |
CAediting_671599 | chr8_144293635_+ | SINE | Alu | AluSz |
CAediting_671600 | chr8_144293638_+ | SINE | Alu | AluSz |
CAediting_671601 | chr8_144293647_+ | SINE | Alu | AluSz |
CAediting_671602 | chr8_144293700_+ | SINE | Alu | AluSz |
CAediting_671603 | chr8_144293712_+ | SINE | Alu | AluSz |
CAediting_671604 | chr8_144295573_+ | SINE | Alu | AluJb |
CAediting_671605 | chr8_144295577_+ | SINE | Alu | AluJb |
CAediting_671606 | chr8_144295578_+ | SINE | Alu | AluJb |
CAediting_671607 | chr8_144295623_+ | SINE | Alu | AluJb |
CAediting_671608 | chr8_144295633_+ | SINE | Alu | AluJb |
CAediting_671609 | chr8_144295647_+ | SINE | Alu | AluJb |
CAediting_671610 | chr8_144296544_+ | SINE | Alu | AluY |
CAediting_671611 | chr8_144296549_+ | SINE | Alu | AluY |
CAediting_671612 | chr8_144296604_+ | SINE | Alu | AluY |
CAediting_671613 | chr8_144296619_+ | SINE | Alu | AluY |
CAediting_671614 | chr8_144296629_+ | SINE | Alu | AluY |
CAediting_671615 | chr8_144296653_+ | SINE | Alu | AluY |
CAediting_671616 | chr8_144296660_+ | SINE | Alu | AluY |
CAediting_671617 | chr8_144296686_+ | SINE | Alu | AluY |
CAediting_671618 | chr8_144296692_+ | SINE | Alu | AluY |
CAediting_671619 | chr8_144296696_+ | SINE | Alu | AluY |
CAediting_671620 | chr8_144296713_+ | SINE | Alu | AluY |
CAediting_671621 | chr8_144296728_+ | SINE | Alu | AluY |
CAediting_671622 | chr8_144296732_+ | SINE | Alu | AluY |
CAediting_671623 | chr8_144296748_+ | SINE | Alu | AluY |
CAediting_671624 | chr8_144296752_+ | SINE | Alu | AluY |
CAediting_671625 | chr8_144296757_+ | SINE | Alu | AluY |
CAediting_671626 | chr8_144296759_+ | SINE | Alu | AluY |
CAediting_671627 | chr8_144296777_+ | SINE | Alu | AluY |
CAediting_671628 | chr8_144298342_+ | SINE | Alu | AluSx |
CAediting_671629 | chr8_144298410_+ | SINE | Alu | AluSx |
CAediting_671630 | chr8_144298484_+ | SINE | Alu | AluSx |
CAediting_671631 | chr8_144298485_+ | SINE | Alu | AluSx |
CAediting_671632 | chr8_144298490_+ | SINE | Alu | AluSx |
CAediting_671633 | chr8_144298494_+ | SINE | Alu | AluSx |
CAediting_671634 | chr8_144298501_+ | SINE | Alu | AluSx |
CAediting_671635 | chr8_144298520_+ | SINE | Alu | AluSx |
CAediting_671636 | chr8_144298526_+ | SINE | Alu | AluSx |
CAediting_671637 | chr8_144298535_+ | SINE | Alu | AluSx |
CAediting_671638 | chr8_144298550_+ | SINE | Alu | AluSx |
CAediting_671639 | chr8_144298613_+ | SINE | Alu | AluSx |
CAediting_671640 | chr8_144298615_+ | SINE | Alu | AluSx |
CAediting_671641 | chr8_144299164_+ | SINE | Alu | AluSx1 |
CAediting_671642 | chr8_144299187_+ | SINE | Alu | AluSx1 |
CAediting_671643 | chr8_144299213_+ | SINE | Alu | AluSx1 |
CAediting_671644 | chr8_144299232_+ | SINE | Alu | AluSx1 |
CAediting_671645 | chr8_144299235_+ | SINE | Alu | AluSx1 |
CAediting_671646 | chr8_144299240_+ | SINE | Alu | AluSx1 |
CAediting_671647 | chr8_144299241_+ | SINE | Alu | AluSx1 |
CAediting_671648 | chr8_144299246_+ | SINE | Alu | AluSx1 |
CAediting_671649 | chr8_144299255_+ | SINE | Alu | AluSx1 |
CAediting_671650 | chr8_144299290_+ | SINE | Alu | AluSx1 |
CAediting_671651 | chr8_144299304_+ | SINE | Alu | AluSx1 |
CAediting_671652 | chr8_144299322_+ | SINE | Alu | AluSx1 |
CAediting_671653 | chr8_144299326_+ | SINE | Alu | AluSx1 |
CAediting_671654 | chr8_144299344_+ | SINE | Alu | AluSx1 |
CAediting_671655 | chr8_144299352_+ | SINE | Alu | AluSx1 |
CAediting_671656 | chr8_144299357_+ | SINE | Alu | AluSx1 |
CAediting_671657 | chr8_144299369_+ | SINE | Alu | AluSx1 |
CAediting_671658 | chr8_144299378_+ | SINE | Alu | AluSx1 |
CAediting_671659 | chr8_144299382_+ | SINE | Alu | AluSx1 |
CAediting_671660 | chr8_144299387_+ | SINE | Alu | AluSx1 |
CAediting_671661 | chr8_144299394_+ | SINE | Alu | AluSx1 |
CAediting_671662 | chr8_144299424_+ | SINE | Alu | AluSx1 |
CAediting_671663 | chr8_144300402_+ | SINE | Alu | AluYf1 |
CAediting_671664 | chr8_144301272_+ | SINE | Alu | AluJo |
CAediting_671665 | chr8_144301305_+ | SINE | Alu | AluJo |
CAediting_671666 | chr8_144301339_+ | SINE | Alu | AluJo |
CAediting_671667 | chr8_144301980_+ | SINE | Alu | AluSx1 |
CAediting_671668 | chr8_144302001_+ | SINE | Alu | AluSx1 |
CAediting_671669 | chr8_144302045_+ | SINE | Alu | AluSx1 |
CAediting_671670 | chr8_144302559_+ | SINE | Alu | AluJo |
CAediting_671671 | chr8_144302632_+ | SINE | Alu | AluJo |
CAediting_671672 | chr8_144302747_+ | SINE | Alu | AluJo |
CAediting_671673 | chr8_144303622_+ | SINE | Alu | AluSz |
CAediting_671674 | chr8_144303623_+ | SINE | Alu | AluSz |
CAediting_671675 | chr8_144303676_+ | SINE | Alu | AluSz |
CAediting_671676 | chr8_144303702_+ | SINE | Alu | AluSz |
CAediting_671677 | chr8_144303731_+ | SINE | Alu | AluSz |
CAediting_671678 | chr8_144303771_+ | SINE | Alu | AluSz |
CAediting_671679 | chr8_144303775_+ | SINE | Alu | AluSz |
CAediting_671680 | chr8_144304463_+ | SINE | Alu | AluJo |
CAediting_671681 | chr8_144304542_+ | SINE | Alu | AluJo |
CAediting_671682 | chr8_144304695_+ | SINE | Alu | AluSz |
CAediting_671683 | chr8_144304724_+ | SINE | Alu | AluSz |
CAediting_671684 | chr8_144304824_+ | SINE | Alu | AluSz |
CAediting_671685 | chr8_144304827_+ | SINE | Alu | AluSz |
CAediting_671686 | chr8_144305429_+ | SINE | Alu | AluSc |
CAediting_671687 | chr8_144305562_+ | SINE | Alu | AluSc |
CAediting_671688 | chr8_144305563_+ | SINE | Alu | AluSc |
CAediting_671689 | chr8_144306421_+ | SINE | Alu | AluJb |
CAediting_671690 | chr8_144306463_+ | SINE | Alu | AluJb |
CAediting_671691 | chr8_144306480_+ | SINE | Alu | AluJb |
CAediting_671692 | chr8_144306548_+ | SINE | Alu | AluJb |
CAediting_671693 | chr8_144306563_+ | SINE | Alu | AluJb |
CAediting_671694 | chr8_144306572_+ | SINE | Alu | AluJb |
CAediting_671695 | chr8_144306577_+ | SINE | Alu | AluJb |
CAediting_671696 | chr8_144306585_+ | SINE | Alu | AluJb |
CAediting_671697 | chr8_144306592_+ | SINE | Alu | AluJb |
CAediting_671698 | chr8_144306602_+ | SINE | Alu | AluJb |
CAediting_671699 | chr8_144306606_+ | SINE | Alu | AluJb |
CAediting_671700 | chr8_144306624_+ | SINE | Alu | AluJb |
CAediting_671701 | chr8_144306625_+ | SINE | Alu | AluJb |
CAediting_671702 | chr8_144306647_+ | SINE | Alu | AluJb |
CAediting_671703 | chr8_144306655_+ | SINE | Alu | AluJb |
CAediting_671704 | chr8_144307466_+ | SINE | Alu | AluSx1 |
CAediting_671705 | chr8_144307468_+ | SINE | Alu | AluSx1 |
CAediting_671706 | chr8_144307484_+ | SINE | Alu | AluSx1 |
CAediting_671707 | chr8_144307485_+ | SINE | Alu | AluSx1 |
CAediting_671708 | chr8_144307506_+ | SINE | Alu | AluSx1 |
CAediting_671709 | chr8_144307544_+ | SINE | Alu | AluSx1 |
CAediting_671710 | chr8_144307556_+ | SINE | Alu | AluSx1 |
CAediting_671711 | chr8_144307569_+ | SINE | Alu | AluSx1 |
CAediting_671712 | chr8_144307579_+ | SINE | Alu | AluSx1 |
CAediting_671713 | chr8_144307584_+ | SINE | Alu | AluSx1 |
CAediting_671714 | chr8_144307586_+ | SINE | Alu | AluSx1 |
CAediting_671715 | chr8_144307590_+ | SINE | Alu | AluSx1 |
CAediting_671716 | chr8_144307615_+ | SINE | Alu | AluSx1 |
CAediting_671717 | chr8_144307619_+ | SINE | Alu | AluSx1 |
CAediting_671718 | chr8_144307623_+ | SINE | Alu | AluSx1 |
CAediting_671719 | chr8_144307640_+ | SINE | Alu | AluSx1 |
CAediting_671720 | chr8_144307655_+ | SINE | Alu | AluSx1 |
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RNA A-to-I editing events in the alternative splicing sites for HSF1 |
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AStype | CAeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
ES | CAediting_671692 | chr8_144306548_+ | 144306527:144306549 | 3SS | 2+0i | TAATTTTTGTATTTCTTCTAGAG | -8.85 | TAATTTTTGTATTTCTTCTAGGG | -8.66 |
ES | CAediting_671692 | chr8_144306548_+ | 144306529:144306551 | 3SS | 0+1i | ATTTTTGTATTTCTTCTAGAGAC | -8.58 | ATTTTTGTATTTCTTCTAGGGAC | 0.17 |
MEX_2 | CAediting_671692 | chr8_144306548_+ | 144306529:144306551 | 3SS | 0+1i | ATTTTTGTATTTCTTCTAGAGAC | -8.58 | ATTTTTGTATTTCTTCTAGGGAC | 0.17 |
ES | CAediting_671711 | chr8_144307569_+ | 144307567:144307589 | 3SS | 0+18i | CCATCTCTCCTAAAAATACAGAA | -14.74 | CCGTCTCTCCTAAAAATACAGAA | -14.06 |
ES | CAediting_671712 | chr8_144307579_+ | 144307567:144307589 | 3SS | 0+8i | CCATCTCTCCTAAAAATACAGAA | -14.74 | CCATCTCTCCTAGAAATACAGAA | -21.67 |
ES | CAediting_671713 | chr8_144307584_+ | 144307567:144307589 | 3SS | 0+3i | CCATCTCTCCTAAAAATACAGAA | -14.74 | CCATCTCTCCTAAAAATGCAGAA | -24.93 |
ES | CAediting_671714 | chr8_144307586_+ | 144307567:144307589 | 3SS | 0+1i | CCATCTCTCCTAAAAATACAGAA | -14.74 | CCATCTCTCCTAAAAATACGGAA | -5.99 |
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Differntial gene expression between RNA A-to-I edited versus non-edited samples for HSF1 |
![]() * The grey color means N/A. |
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![]() * Click on the image to enlarge it in a new window. |
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Protein coding region RNA A-to-I editings for HSF1 |
![]() * Click on the image to enlarge it in a new window. |
Top |
The effects of the RNA editing to the miRNA binding sites for HSF1 |
**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page. |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
CAediting_671594 | chr8_144293571_+ | ENSG00000185122.9 | ENST00000528988 | hsa-miR-4449 | 144293568 | 144293574 | 7mer-m8 | 144293554 | 144293575 | 157.00 | -30.45 |
CAediting_671591 | chr8_144293491_+ | ENSG00000185122.9 | ENST00000528988 | hsa-miR-6793-3p | 144293485 | 144293491 | 7mer-m8 | 144293473 | 144293492 | 145.00 | -19.90 |
CAediting_671593 | chr8_144293567_+ | ENSG00000185122.9 | ENST00000528988 | hsa-miR-3190-5p | 144293565 | 144293571 | 7mer-m8 | 144293555 | 144293572 | 142.00 | -18.38 |
CAediting_671593 | chr8_144293567_+ | ENSG00000185122.9 | ENST00000528988 | hsa-miR-4701-5p | 144293564 | 144293570 | 7mer-m8 | 144293550 | 144293571 | 140.00 | -14.44 |
CAediting_671593 | chr8_144293567_+ | ENSG00000185122.9 | ENST00000528988 | hsa-miR-588 | 144293564 | 144293570 | 7mer-m8 | 144293552 | 144293571 | 144.00 | -21.25 |
CAediting_671595 | chr8_144293577_+ | ENSG00000185122.9 | ENST00000528988 | hsa-miR-17-3p | 144293573 | 144293579 | 7mer-m8 | 144293558 | 144293579 | 158.00 | -21.11 |
CAediting_671595 | chr8_144293577_+ | ENSG00000185122.9 | ENST00000528988 | hsa-miR-1910-5p | 144293570 | 144293576 | 7mer-m8 | 144293558 | 144293577 | 149.00 | -21.80 |
CAediting_671590 | chr8_144293480_+ | ENSG00000185122.9 | ENST00000528988 | hsa-miR-1273c | 144293475 | 144293480 | 6mer | 144293461 | 144293481 | 140.00 | -22.14 |
CAediting_671590 | chr8_144293480_+ | ENSG00000185122.9 | ENST00000528988 | hsa-miR-1285-3p | 144293479 | 144293484 | 6mer | 144293464 | 144293485 | 152.00 | -26.10 |
CAediting_671590 | chr8_144293480_+ | ENSG00000185122.9 | ENST00000528988 | hsa-miR-1285-3p | 144293479 | 144293484 | 6mer | 144293464 | 144293485 | 152.00 | -26.10 |
CAediting_671590 | chr8_144293480_+ | ENSG00000185122.9 | ENST00000528988 | hsa-miR-4486 | 144293478 | 144293484 | 7mer-m8 | 144293469 | 144293485 | 145.00 | -19.61 |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
CAediting_671590 | chr8_144293480_+ | ENSG00000185122.9 | ENST00000528988 | hsa-miR-1262 | 144293477 | 144293483 | 7mer-m8 | 144293463 | 144293484 | 142 | -16.42 |
CAediting_671591 | chr8_144293491_+ | ENSG00000185122.9 | ENST00000528988 | hsa-miR-3145-5p | 144293486 | 144293492 | 7mer-m8 | 144293472 | 144293493 | 142 | -10.68 |
CAediting_671592 | chr8_144293515_+ | ENSG00000185122.9 | ENST00000528988 | hsa-miR-3174 | 144293511 | 144293516 | 6mer | 144293495 | 144293517 | 147 | -24.49 |
CAediting_671590 | chr8_144293480_+ | ENSG00000185122.9 | ENST00000528988 | hsa-miR-4701-3p | 144293477 | 144293483 | 7mer-m8 | 144293464 | 144293484 | 149 | -19.07 |
CAediting_671590 | chr8_144293480_+ | ENSG00000185122.9 | ENST00000528988 | hsa-miR-542-3p | 144293475 | 144293480 | 6mer | 144293461 | 144293481 | 152 | -13.23 |
CAediting_671593 | chr8_144293567_+ | ENSG00000185122.9 | ENST00000528988 | hsa-miR-664a-5p | 144293565 | 144293571 | 7mer-m8 | 144293546 | 144293572 | 149 | -21.18 |
CAediting_671594 | chr8_144293571_+ | ENSG00000185122.9 | ENST00000528988 | hsa-miR-664a-5p | 144293565 | 144293571 | 7mer-m8 | 144293546 | 144293572 | 149 | -21.18 |
CAediting_671590 | chr8_144293480_+ | ENSG00000185122.9 | ENST00000528988 | hsa-miR-6736-5p | 144293477 | 144293483 | 7mer-m8 | 144293462 | 144293484 | 148 | -25.17 |
CAediting_671590 | chr8_144293480_+ | ENSG00000185122.9 | ENST00000528988 | hsa-miR-6776-5p | 144293478 | 144293484 | 7mer-m8 | 144293466 | 144293485 | 152 | -22.73 |
CAediting_671594 | chr8_144293571_+ | ENSG00000185122.9 | ENST00000528988 | hsa-miR-6838-3p | 144293569 | 144293576 | 8mer-1a | 144293556 | 144293576 | 148 | -13.83 |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
CAediting_1306324 | chr19_13836464_- | ENSG00000185122.9 | ENST00000528988 | hsa-miR-27a-3p | 144293514 | 144293520 | 7mer-m8 | 144293500 | 144293521 | 161 | -23.81 |
CAediting_1054808 | chr15_66496985_- | ENSG00000185122.9 | ENST00000400780 | hsa-miR-4512 | 144314330 | 144314336 | 7mer-m8 | 144314316 | 144314337 | 145 | -23 |
CAediting_1229414 | chr17_67471546_+ | ENSG00000185122.9 | ENST00000400780 | hsa-miR-548aa | 144314381 | 144314387 | 7mer-m8 | 144314364 | 144314388 | 144 | -16.29 |
CAediting_580943 | chr7_100356700_+ | ENSG00000185122.9 | ENST00000528988 | hsa-miR-6840-3p | 144293529 | 144293535 | 7mer-m8 | 144293515 | 144293536 | 143 | -27.4 |
CAediting_414656 | chr5_72878640_+ | ENSG00000185122.9 | ENST00000528988 | hsa-miR-4804-3p | 144309495 | 144309501 | 7mer-m8 | 144309482 | 144309502 | 157 | -24.45 |
CAediting_1368054 | chr19_46709310_- | ENSG00000185122.9 | ENST00000534314 | hsa-miR-320e | 144311751 | 144311757 | 7mer-m8 | 144311741 | 144311758 | 144 | -17.18 |
CAediting_580943 | chr7_100356700_+ | ENSG00000185122.9 | ENST00000534314 | hsa-miR-6840-3p | 144312043 | 144312049 | 7mer-m8 | 144312029 | 144312050 | 151 | -25.99 |
CAediting_604450 | chr7_133034877_- | ENSG00000185122.9 | ENST00000530661 | hsa-miR-3654 | 144312700 | 144312706 | 7mer-m8 | 144312689 | 144312707 | 141 | -18.7 |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
CAediting_1368054 | chr19_46709310_- | ENSG00000185122.9 | ENST00000528988 | hsa-miR-320e | 144308987 | 144308993 | 7mer-m8 | 144308977 | 144308994 | 140 | -13.43 |
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The effects of the RNA editing to the stability of the RNA structures for HSF1 |
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ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
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CAeditom_ID | ENST | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
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Relation with ADAR for HSF1 |
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Cancer | CAeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
COAD | CAediting_671566 | chr8_144292777_+ | 0.0281724384491124 | 0.307478941150174 | . | . | 0.00238335862918379 | 0.416208169153968 |
ESCA | CAediting_671566 | chr8_144292777_+ | . | . | . | . | 0.015372252041371 | 0.301784399146862 |
BRCA | CAediting_671576 | chr8_144292847_+ | . | . | 0.0109524338087464 | 0.337554877463593 | . | . |
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Relation with cancer stages for HSF1 |
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Cancer | Stage_type | CAeditomID | position | P-val | Coeff. |
BRCA | pathologic_stage | CAediting_671566 | chr8_144292777_+ | 0.00722322621870999 | -0.25831244210683 |
BRCA | pathologic_stage | CAediting_671576 | chr8_144292847_+ | 0.0246749826424756 | -0.30000965459197 |
HNSC | clinical_stage | CAediting_671566 | chr8_144292777_+ | 0.0104062681873263 | 0.279820990271484 |
STAD | pathologic_stage | CAediting_671567 | chr8_144292782_+ | 0.0464551583213106 | 0.258122657000355 |
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Relation with survival for HSF1 |
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Cancer | CAeditomID | position | KMpvalue | Coxpvalue | CoxHR |
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RelatedDrugs for HSF1 |
![]() (DrugBank Version 5.1.8 2021-01-03) |
Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for HSF1 |
![]() (DisGeNet 7.0) |
Gene | Disease ID | Disease name | # pubmeds | Source |
HSF1 | C0006826 | Malignant Neoplasms | 1 | CTD_human |
HSF1 | C0027651 | Neoplasms | 1 | CTD_human |
HSF1 | C0086692 | Benign Neoplasm | 1 | CTD_human |
HSF1 | C1862939 | AMYOTROPHIC LATERAL SCLEROSIS 1 | 1 | CTD_human |
HSF1 | C1862941 | Amyotrophic Lateral Sclerosis, Sporadic | 1 | CTD_human |
HSF1 | C4551993 | Amyotrophic Lateral Sclerosis, Familial | 1 | CTD_human |