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Editing gene: HPN (CAeditome ID:3249)

Gene summary for HPN

Gene summary

Gene information	Gene symbol	HPN
	Gene ID	3249
	Gene name	hepsin
	Synonyms	TMPRSS1
	Cytomap	19q13.11
	Type of gene	protein-coding
	Description	serine protease hepsintesticular tissue protein Li 85transmembrane protease serine 1
	Modification date	20210518
	UniProtAcc	P05981
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene	GO ID	GO term	PubMed ID
HPN	GO:0031965	Serine protease hepsin	15614436
HPN	GO:0004252	Serine protease hepsin	16908524
HPN	GO:0008233	Serine protease hepsin	16908524
HPN	GO:0008233	Serine protease hepsin	19843851
HPN	GO:0008236	Serine protease hepsin	19911255
HPN	GO:0006508	Serine protease hepsin	16908524
HPN	GO:0006508	Serine protease hepsin	19843851
HPN	GO:0006508	Serine protease hepsin	19911255
HPN	GO:0006508	Serine protease hepsin	24227843
HPN	GO:0010719	Serine protease hepsin	19843851
HPN	GO:0010756	Serine protease hepsin	16908524
HPN	GO:0034769	Serine protease hepsin	16908524
HPN	GO:0043066	Serine protease hepsin	15614436
HPN	GO:0043923	Serine protease hepsin	15614436
HPN	GO:0050680	Serine protease hepsin	19843851
HPN	GO:2000347	Serine protease hepsin	15614436
HPN	GO:0005789	Serine protease hepsin	17918732
HPN	GO:0005886	Serine protease hepsin	8346233
HPN	GO:0005887	Serine protease hepsin	1885621
HPN	GO:0009986	Serine protease hepsin	16908524
HPN	GO:0009986	Serine protease hepsin	8346233
HPN	GO:0016021	Serine protease hepsin	19843851

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RNA A-to-I events for HPN

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000105707.12

RNA A-to-I editing events in Cancer.

CAediting_1337404(35046263, +), CAediting_1337405(35046325, +), CAediting_1337406(35046386, +), CAediting_1337407(35046479, +), CAediting_1337408(35046484, +), CAediting_1337409(35046879, +), CAediting_1337410(35046968, +), CAediting_1337411(35046970, +), CAediting_1337412(35047010, +), CAediting_1337413(35047035, +), CAediting_1337414(35047102, +), CAediting_1337415(35047716, +), CAediting_1337416(35047730, +), CAediting_1337417(35047738, +), CAediting_1337418(35047739, +), CAediting_1337419(35047765, +), CAediting_1337420(35047769, +), CAediting_1337421(35047770, +), CAediting_1337422(35047773, +), CAediting_1337423(35047777, +), CAediting_1337424(35047778, +), CAediting_1337425(35047783, +), CAediting_1337426(35047796, +), CAediting_1337427(35047802, +), CAediting_1337428(35047812, +), CAediting_1337429(35047820, +), CAediting_1337430(35047821, +), CAediting_1337431(35047835, +), CAediting_1337432(35047836, +), CAediting_1337433(35047838, +), CAediting_1337434(35047839, +), CAediting_1337435(35047841, +), CAediting_1337436(35047845, +), CAediting_1337437(35047846, +), CAediting_1337438(35047847, +), CAediting_1337439(35047850, +), CAediting_1337440(35047854, +), CAediting_1337441(35047874, +), CAediting_1337442(35047876, +), CAediting_1337443(35047877, +), CAediting_1337444(35047902, +), CAediting_1337445(35047905, +), CAediting_1337446(35047916, +), CAediting_1337447(35047939, +), CAediting_1337448(35047955, +), CAediting_1337449(35047960, +), CAediting_1337450(35047969, +), CAediting_1337451(35047979, +), CAediting_1337452(35048616, +), CAediting_1337453(35048638, +), CAediting_1337454(35048639, +), CAediting_1337455(35048661, +), CAediting_1337456(35048665, +), CAediting_1337457(35050192, +), CAediting_1337458(35050216, +), CAediting_1337459(35050222, +), CAediting_1337460(35050223, +), CAediting_1337461(35050240, +), CAediting_1337462(35050248, +), CAediting_1337463(35050249, +), CAediting_1337464(35050260, +), CAediting_1337465(35050275, +), CAediting_1337466(35050284, +), CAediting_1337467(35050289, +), CAediting_1337468(35050298, +), CAediting_1337469(35050304, +), CAediting_1337470(35050307, +), CAediting_1337471(35050309, +), CAediting_1337472(35050314, +), CAediting_1337473(35050321, +), CAediting_1337474(35050365, +), CAediting_1337475(35050384, +), CAediting_1337476(35050396, +), CAediting_1337477(35050976, +), CAediting_1337478(35051017, +), CAediting_1337479(35051020, +), CAediting_1337480(35051021, +), CAediting_1337481(35051034, +), CAediting_1337482(35051043, +), CAediting_1337483(35051128, +), CAediting_1337484(35051156, +), CAediting_1337485(35051208, +), CAediting_1337486(35051238, +), CAediting_1337487(35051248, +), CAediting_1337488(35051254, +), CAediting_1337489(35051266, +), CAediting_1337490(35051329, +), CAediting_1337491(35051352, +), CAediting_1337492(35051370, +), CAediting_1337493(35051371, +), CAediting_1337494(35051426, +), CAediting_1337495(35051429, +), CAediting_1337496(35051461, +), CAediting_1337497(35051499, +), CAediting_1337498(35051521, +), CAediting_1337499(35052272, +), CAediting_1337500(35052273, +), CAediting_1337501(35052278, +), CAediting_1337502(35052299, +), CAediting_1337503(35052303, +), CAediting_1337504(35052342, +), CAediting_1337505(35052351, +), CAediting_1337506(35052372, +), CAediting_1337507(35052385, +), CAediting_1337508(35052407, +), CAediting_1337509(35052408, +), CAediting_1337510(35052413, +), CAediting_1337511(35052417, +), CAediting_1337512(35052421, +), CAediting_1337513(35052430, +), CAediting_1337514(35052476, +), CAediting_1337515(35052480, +), CAediting_1337516(35052481, +), CAediting_1337517(35052490, +), CAediting_1337518(35052495, +), CAediting_1337519(35053495, +), CAediting_1337520(35053526, +), CAediting_1337521(35053566, +), CAediting_1337522(35053580, +), CAediting_1337523(35053583, +), CAediting_1337524(35053584, +), CAediting_1337525(35053585, +), CAediting_1337526(35053586, +), CAediting_1337527(35053587, +), CAediting_1337528(35053598, +), CAediting_1337529(35053624, +), CAediting_1337530(35053625, +), CAediting_1337531(35053630, +), CAediting_1337532(35053666, +), CAediting_1337533(35053670, +), CAediting_1337534(35053686, +), CAediting_1337535(35054163, +), CAediting_1337536(35054171, +), CAediting_1337537(35054184, +), CAediting_1337538(35054189, +), CAediting_1337539(35054208, +), CAediting_1337540(35054210, +), CAediting_1337541(35054211, +), CAediting_1337542(35054240, +), CAediting_1337543(35054267, +), CAediting_1337544(35054271, +), CAediting_1337545(35054275, +), CAediting_1337546(35054281, +), CAediting_1337547(35054284, +), CAediting_1337548(35054298, +), CAediting_1337549(35054338, +), CAediting_1337550(35054359, +), CAediting_1337551(35055126, +), CAediting_1337552(35055128, +), CAediting_1337553(35055250, +), CAediting_1337554(35055322, +), CAediting_1337555(35055339, +), CAediting_1337556(35055346, +), CAediting_1337557(35057157, +), CAediting_1337558(35057191, +), CAediting_1337559(35057200, +), CAediting_1337560(35057247, +), CAediting_1337561(35057263, +), CAediting_1337562(35057269, +), CAediting_1337563(35057279, +), CAediting_1337564(35057305, +), CAediting_1337565(35057311, +), CAediting_1337566(35057332, +), CAediting_1337567(35057365, +), CAediting_1337568(35057367, +), CAediting_1337569(35057375, +), CAediting_1337570(35057376, +), CAediting_1337571(35057889, +), CAediting_1337572(35057896, +), CAediting_1337573(35058006, +), CAediting_1337574(35058032, +), CAediting_1337575(35058033, +), CAediting_1337576(35058074, +), CAediting_1337577(35058224, +), CAediting_1337578(35058241, +), CAediting_1337579(35058273, +), CAediting_1337580(35058279, +), CAediting_1337581(35058280, +), CAediting_1337582(35058283, +), CAediting_1337583(35058297, +), CAediting_1337584(35058309, +), CAediting_1337585(35058319, +), CAediting_1337586(35058321, +), CAediting_1337587(35058370, +), CAediting_1337588(35058389, +), CAediting_1337589(35058421, +),

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RNA editing positional annotations for HPN using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_1337404	chr19_35046263_+	ncRNA_intronic
CAediting_1337405	chr19_35046325_+	ncRNA_intronic
CAediting_1337406	chr19_35046386_+	ncRNA_intronic
CAediting_1337407	chr19_35046479_+	ncRNA_intronic
CAediting_1337408	chr19_35046484_+	ncRNA_intronic
CAediting_1337409	chr19_35046879_+	ncRNA_intronic
CAediting_1337410	chr19_35046968_+	ncRNA_intronic
CAediting_1337411	chr19_35046970_+	ncRNA_intronic
CAediting_1337412	chr19_35047010_+	ncRNA_intronic
CAediting_1337413	chr19_35047035_+	ncRNA_intronic
CAediting_1337414	chr19_35047102_+	ncRNA_intronic
CAediting_1337415	chr19_35047716_+	ncRNA_intronic
CAediting_1337416	chr19_35047730_+	ncRNA_intronic
CAediting_1337417	chr19_35047738_+	ncRNA_intronic
CAediting_1337418	chr19_35047739_+	ncRNA_intronic
CAediting_1337419	chr19_35047765_+	ncRNA_intronic
CAediting_1337420	chr19_35047769_+	ncRNA_intronic
CAediting_1337421	chr19_35047770_+	ncRNA_intronic
CAediting_1337422	chr19_35047773_+	ncRNA_intronic
CAediting_1337423	chr19_35047777_+	ncRNA_intronic
CAediting_1337424	chr19_35047778_+	ncRNA_intronic
CAediting_1337425	chr19_35047783_+	ncRNA_intronic
CAediting_1337426	chr19_35047796_+	ncRNA_intronic
CAediting_1337427	chr19_35047802_+	ncRNA_intronic
CAediting_1337428	chr19_35047812_+	ncRNA_intronic
CAediting_1337429	chr19_35047820_+	ncRNA_intronic
CAediting_1337430	chr19_35047821_+	ncRNA_intronic
CAediting_1337431	chr19_35047835_+	ncRNA_intronic
CAediting_1337432	chr19_35047836_+	ncRNA_intronic
CAediting_1337433	chr19_35047838_+	ncRNA_intronic
CAediting_1337434	chr19_35047839_+	ncRNA_intronic
CAediting_1337435	chr19_35047841_+	ncRNA_intronic
CAediting_1337436	chr19_35047845_+	ncRNA_intronic
CAediting_1337437	chr19_35047846_+	ncRNA_intronic
CAediting_1337438	chr19_35047847_+	ncRNA_intronic
CAediting_1337439	chr19_35047850_+	ncRNA_intronic
CAediting_1337440	chr19_35047854_+	ncRNA_intronic
CAediting_1337441	chr19_35047874_+	ncRNA_intronic
CAediting_1337442	chr19_35047876_+	ncRNA_intronic
CAediting_1337443	chr19_35047877_+	ncRNA_intronic
CAediting_1337444	chr19_35047902_+	ncRNA_intronic
CAediting_1337445	chr19_35047905_+	ncRNA_intronic
CAediting_1337446	chr19_35047916_+	ncRNA_intronic
CAediting_1337447	chr19_35047939_+	ncRNA_intronic
CAediting_1337448	chr19_35047955_+	ncRNA_intronic
CAediting_1337449	chr19_35047960_+	ncRNA_intronic
CAediting_1337450	chr19_35047969_+	ncRNA_intronic
CAediting_1337451	chr19_35047979_+	ncRNA_intronic
CAediting_1337452	chr19_35048616_+	ncRNA_intronic
CAediting_1337453	chr19_35048638_+	ncRNA_intronic
CAediting_1337454	chr19_35048639_+	ncRNA_intronic
CAediting_1337455	chr19_35048661_+	ncRNA_intronic
CAediting_1337456	chr19_35048665_+	ncRNA_intronic
CAediting_1337457	chr19_35050192_+	ncRNA_intronic
CAediting_1337458	chr19_35050216_+	ncRNA_intronic
CAediting_1337459	chr19_35050222_+	ncRNA_intronic
CAediting_1337460	chr19_35050223_+	ncRNA_intronic
CAediting_1337461	chr19_35050240_+	ncRNA_intronic
CAediting_1337462	chr19_35050248_+	ncRNA_intronic
CAediting_1337463	chr19_35050249_+	ncRNA_intronic
CAediting_1337464	chr19_35050260_+	ncRNA_intronic
CAediting_1337465	chr19_35050275_+	ncRNA_intronic
CAediting_1337466	chr19_35050284_+	ncRNA_intronic
CAediting_1337467	chr19_35050289_+	ncRNA_intronic
CAediting_1337468	chr19_35050298_+	ncRNA_intronic
CAediting_1337469	chr19_35050304_+	ncRNA_intronic
CAediting_1337470	chr19_35050307_+	ncRNA_intronic
CAediting_1337471	chr19_35050309_+	ncRNA_intronic
CAediting_1337472	chr19_35050314_+	ncRNA_intronic
CAediting_1337473	chr19_35050321_+	ncRNA_intronic
CAediting_1337474	chr19_35050365_+	ncRNA_intronic
CAediting_1337475	chr19_35050384_+	ncRNA_intronic
CAediting_1337476	chr19_35050396_+	ncRNA_intronic
CAediting_1337477	chr19_35050976_+	ncRNA_intronic
CAediting_1337478	chr19_35051017_+	ncRNA_intronic
CAediting_1337479	chr19_35051020_+	ncRNA_intronic
CAediting_1337480	chr19_35051021_+	ncRNA_intronic
CAediting_1337481	chr19_35051034_+	ncRNA_intronic
CAediting_1337482	chr19_35051043_+	ncRNA_intronic
CAediting_1337483	chr19_35051128_+	ncRNA_intronic
CAediting_1337484	chr19_35051156_+	ncRNA_intronic
CAediting_1337485	chr19_35051208_+	ncRNA_intronic
CAediting_1337486	chr19_35051238_+	ncRNA_intronic
CAediting_1337487	chr19_35051248_+	ncRNA_intronic
CAediting_1337488	chr19_35051254_+	ncRNA_intronic
CAediting_1337489	chr19_35051266_+	ncRNA_intronic
CAediting_1337490	chr19_35051329_+	ncRNA_intronic
CAediting_1337491	chr19_35051352_+	ncRNA_intronic
CAediting_1337492	chr19_35051370_+	ncRNA_intronic
CAediting_1337493	chr19_35051371_+	ncRNA_intronic
CAediting_1337494	chr19_35051426_+	ncRNA_intronic
CAediting_1337495	chr19_35051429_+	ncRNA_intronic
CAediting_1337496	chr19_35051461_+	ncRNA_intronic
CAediting_1337497	chr19_35051499_+	ncRNA_intronic
CAediting_1337498	chr19_35051521_+	ncRNA_intronic
CAediting_1337499	chr19_35052272_+	ncRNA_intronic
CAediting_1337500	chr19_35052273_+	ncRNA_intronic
CAediting_1337501	chr19_35052278_+	ncRNA_intronic
CAediting_1337502	chr19_35052299_+	ncRNA_intronic
CAediting_1337503	chr19_35052303_+	ncRNA_intronic
CAediting_1337504	chr19_35052342_+	ncRNA_intronic
CAediting_1337505	chr19_35052351_+	ncRNA_intronic
CAediting_1337506	chr19_35052372_+	ncRNA_intronic
CAediting_1337507	chr19_35052385_+	ncRNA_intronic
CAediting_1337508	chr19_35052407_+	ncRNA_intronic
CAediting_1337509	chr19_35052408_+	ncRNA_intronic
CAediting_1337510	chr19_35052413_+	ncRNA_intronic
CAediting_1337511	chr19_35052417_+	ncRNA_intronic
CAediting_1337512	chr19_35052421_+	ncRNA_intronic
CAediting_1337513	chr19_35052430_+	ncRNA_intronic
CAediting_1337514	chr19_35052476_+	ncRNA_intronic
CAediting_1337515	chr19_35052480_+	ncRNA_intronic
CAediting_1337516	chr19_35052481_+	ncRNA_intronic
CAediting_1337517	chr19_35052490_+	ncRNA_intronic
CAediting_1337518	chr19_35052495_+	ncRNA_intronic
CAediting_1337519	chr19_35053495_+	ncRNA_intronic
CAediting_1337520	chr19_35053526_+	ncRNA_intronic
CAediting_1337521	chr19_35053566_+	ncRNA_intronic
CAediting_1337522	chr19_35053580_+	ncRNA_intronic
CAediting_1337523	chr19_35053583_+	ncRNA_intronic
CAediting_1337524	chr19_35053584_+	ncRNA_intronic
CAediting_1337525	chr19_35053585_+	ncRNA_intronic
CAediting_1337526	chr19_35053586_+	ncRNA_intronic
CAediting_1337527	chr19_35053587_+	ncRNA_intronic
CAediting_1337528	chr19_35053598_+	ncRNA_intronic
CAediting_1337529	chr19_35053624_+	ncRNA_intronic
CAediting_1337530	chr19_35053625_+	ncRNA_intronic
CAediting_1337531	chr19_35053630_+	ncRNA_intronic
CAediting_1337532	chr19_35053666_+	ncRNA_intronic
CAediting_1337533	chr19_35053670_+	ncRNA_intronic
CAediting_1337534	chr19_35053686_+	ncRNA_intronic
CAediting_1337535	chr19_35054163_+	ncRNA_intronic
CAediting_1337536	chr19_35054171_+	ncRNA_intronic
CAediting_1337537	chr19_35054184_+	ncRNA_intronic
CAediting_1337538	chr19_35054189_+	ncRNA_intronic
CAediting_1337539	chr19_35054208_+	ncRNA_intronic
CAediting_1337540	chr19_35054210_+	ncRNA_intronic
CAediting_1337541	chr19_35054211_+	ncRNA_intronic
CAediting_1337542	chr19_35054240_+	ncRNA_intronic
CAediting_1337543	chr19_35054267_+	ncRNA_intronic
CAediting_1337544	chr19_35054271_+	ncRNA_intronic
CAediting_1337545	chr19_35054275_+	ncRNA_intronic
CAediting_1337546	chr19_35054281_+	ncRNA_intronic
CAediting_1337547	chr19_35054284_+	ncRNA_intronic
CAediting_1337548	chr19_35054298_+	ncRNA_intronic
CAediting_1337549	chr19_35054338_+	ncRNA_intronic
CAediting_1337550	chr19_35054359_+	ncRNA_intronic
CAediting_1337551	chr19_35055126_+	ncRNA_intronic
CAediting_1337552	chr19_35055128_+	ncRNA_intronic
CAediting_1337553	chr19_35055250_+	ncRNA_intronic
CAediting_1337554	chr19_35055322_+	ncRNA_intronic
CAediting_1337555	chr19_35055339_+	ncRNA_intronic
CAediting_1337556	chr19_35055346_+	ncRNA_intronic
CAediting_1337557	chr19_35057157_+	ncRNA_intronic
CAediting_1337558	chr19_35057191_+	ncRNA_intronic
CAediting_1337559	chr19_35057200_+	ncRNA_intronic
CAediting_1337560	chr19_35057247_+	ncRNA_intronic
CAediting_1337561	chr19_35057263_+	ncRNA_intronic
CAediting_1337562	chr19_35057269_+	ncRNA_intronic
CAediting_1337563	chr19_35057279_+	ncRNA_intronic
CAediting_1337564	chr19_35057305_+	ncRNA_intronic
CAediting_1337565	chr19_35057311_+	ncRNA_intronic
CAediting_1337566	chr19_35057332_+	ncRNA_intronic
CAediting_1337567	chr19_35057365_+	ncRNA_intronic
CAediting_1337568	chr19_35057367_+	ncRNA_intronic
CAediting_1337569	chr19_35057375_+	ncRNA_intronic
CAediting_1337570	chr19_35057376_+	ncRNA_intronic
CAediting_1337571	chr19_35057889_+	ncRNA_intronic
CAediting_1337572	chr19_35057896_+	ncRNA_intronic
CAediting_1337573	chr19_35058006_+	ncRNA_intronic
CAediting_1337574	chr19_35058032_+	ncRNA_intronic
CAediting_1337575	chr19_35058033_+	ncRNA_intronic
CAediting_1337576	chr19_35058074_+	ncRNA_intronic
CAediting_1337577	chr19_35058224_+	ncRNA_intronic
CAediting_1337578	chr19_35058241_+	ncRNA_intronic
CAediting_1337579	chr19_35058273_+	ncRNA_intronic
CAediting_1337580	chr19_35058279_+	ncRNA_intronic
CAediting_1337581	chr19_35058280_+	ncRNA_intronic
CAediting_1337582	chr19_35058283_+	ncRNA_intronic
CAediting_1337583	chr19_35058297_+	ncRNA_intronic
CAediting_1337584	chr19_35058309_+	ncRNA_intronic
CAediting_1337585	chr19_35058319_+	ncRNA_intronic
CAediting_1337586	chr19_35058321_+	ncRNA_intronic
CAediting_1337587	chr19_35058370_+	ncRNA_intronic
CAediting_1337588	chr19_35058389_+	ncRNA_intronic
CAediting_1337589	chr19_35058421_+	ncRNA_intronic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_1337404	chr19_35046263_+	SINE	Alu	AluSx1
CAediting_1337405	chr19_35046325_+	SINE	Alu	AluSx1
CAediting_1337406	chr19_35046386_+	SINE	Alu	AluSx1
CAediting_1337407	chr19_35046479_+	SINE	Alu	AluSx1
CAediting_1337408	chr19_35046484_+	SINE	Alu	AluSx1
CAediting_1337409	chr19_35046879_+	SINE	Alu	AluY
CAediting_1337410	chr19_35046968_+	SINE	Alu	AluY
CAediting_1337411	chr19_35046970_+	SINE	Alu	AluY
CAediting_1337412	chr19_35047010_+	SINE	Alu	AluY
CAediting_1337413	chr19_35047035_+	SINE	Alu	AluY
CAediting_1337414	chr19_35047102_+	SINE	Alu	AluY
CAediting_1337415	chr19_35047716_+	SINE	Alu	AluJb
CAediting_1337416	chr19_35047730_+	SINE	Alu	AluJb
CAediting_1337417	chr19_35047738_+	SINE	Alu	AluJb
CAediting_1337418	chr19_35047739_+	SINE	Alu	AluJb
CAediting_1337419	chr19_35047765_+	SINE	Alu	AluJb
CAediting_1337420	chr19_35047769_+	SINE	Alu	AluJb
CAediting_1337421	chr19_35047770_+	SINE	Alu	AluJb
CAediting_1337422	chr19_35047773_+	SINE	Alu	AluJb
CAediting_1337423	chr19_35047777_+	SINE	Alu	AluJb
CAediting_1337424	chr19_35047778_+	SINE	Alu	AluJb
CAediting_1337425	chr19_35047783_+	SINE	Alu	AluJb
CAediting_1337426	chr19_35047796_+	SINE	Alu	AluJb
CAediting_1337427	chr19_35047802_+	SINE	Alu	AluJb
CAediting_1337428	chr19_35047812_+	SINE	Alu	AluJb
CAediting_1337429	chr19_35047820_+	SINE	Alu	AluJb
CAediting_1337430	chr19_35047821_+	SINE	Alu	AluJb
CAediting_1337431	chr19_35047835_+	SINE	Alu	AluJb
CAediting_1337432	chr19_35047836_+	SINE	Alu	AluJb
CAediting_1337433	chr19_35047838_+	SINE	Alu	AluJb
CAediting_1337434	chr19_35047839_+	SINE	Alu	AluJb
CAediting_1337435	chr19_35047841_+	SINE	Alu	AluJb
CAediting_1337436	chr19_35047845_+	SINE	Alu	AluJb
CAediting_1337437	chr19_35047846_+	SINE	Alu	AluJb
CAediting_1337438	chr19_35047847_+	SINE	Alu	AluJb
CAediting_1337439	chr19_35047850_+	SINE	Alu	AluJb
CAediting_1337440	chr19_35047854_+	SINE	Alu	AluJb
CAediting_1337441	chr19_35047874_+	SINE	Alu	AluJb
CAediting_1337442	chr19_35047876_+	SINE	Alu	AluJb
CAediting_1337443	chr19_35047877_+	SINE	Alu	AluJb
CAediting_1337444	chr19_35047902_+	SINE	Alu	AluJb
CAediting_1337445	chr19_35047905_+	SINE	Alu	AluJb
CAediting_1337446	chr19_35047916_+	SINE	Alu	AluJb
CAediting_1337447	chr19_35047939_+	SINE	Alu	AluJb
CAediting_1337448	chr19_35047955_+	SINE	Alu	AluJb
CAediting_1337449	chr19_35047960_+	SINE	Alu	AluJb
CAediting_1337450	chr19_35047969_+	SINE	Alu	AluJb
CAediting_1337451	chr19_35047979_+	SINE	Alu	AluJb
CAediting_1337452	chr19_35048616_+	SINE	Alu	FLAM_C
CAediting_1337453	chr19_35048638_+	SINE	Alu	FLAM_C
CAediting_1337454	chr19_35048639_+	SINE	Alu	FLAM_C
CAediting_1337455	chr19_35048661_+	SINE	Alu	FLAM_C
CAediting_1337456	chr19_35048665_+	SINE	Alu	FLAM_C
CAediting_1337457	chr19_35050192_+	SINE	Alu	AluSc8
CAediting_1337458	chr19_35050216_+	SINE	Alu	AluSc8
CAediting_1337459	chr19_35050222_+	SINE	Alu	AluSc8
CAediting_1337460	chr19_35050223_+	SINE	Alu	AluSc8
CAediting_1337461	chr19_35050240_+	SINE	Alu	AluSc8
CAediting_1337462	chr19_35050248_+	SINE	Alu	AluSc8
CAediting_1337463	chr19_35050249_+	SINE	Alu	AluSc8
CAediting_1337464	chr19_35050260_+	SINE	Alu	AluSc8
CAediting_1337465	chr19_35050275_+	SINE	Alu	AluSc8
CAediting_1337466	chr19_35050284_+	SINE	Alu	AluSc8
CAediting_1337467	chr19_35050289_+	SINE	Alu	AluSc8
CAediting_1337468	chr19_35050298_+	SINE	Alu	AluSc8
CAediting_1337469	chr19_35050304_+	SINE	Alu	AluSc8
CAediting_1337470	chr19_35050307_+	SINE	Alu	AluSc8
CAediting_1337471	chr19_35050309_+	SINE	Alu	AluSc8
CAediting_1337472	chr19_35050314_+	SINE	Alu	AluSc8
CAediting_1337473	chr19_35050321_+	SINE	Alu	AluSc8
CAediting_1337474	chr19_35050365_+	SINE	Alu	AluSc8
CAediting_1337475	chr19_35050384_+	SINE	Alu	AluSc8
CAediting_1337476	chr19_35050396_+	SINE	Alu	AluSc8
CAediting_1337477	chr19_35050976_+	SINE	Alu	AluJr4
CAediting_1337478	chr19_35051017_+	SINE	Alu	AluJr4
CAediting_1337479	chr19_35051020_+	SINE	Alu	AluJr4
CAediting_1337480	chr19_35051021_+	SINE	Alu	AluJr4
CAediting_1337481	chr19_35051034_+	SINE	Alu	AluJr4
CAediting_1337482	chr19_35051043_+	SINE	Alu	AluJr4
CAediting_1337483	chr19_35051128_+	SINE	Alu	AluSx
CAediting_1337484	chr19_35051156_+	SINE	Alu	AluSx
CAediting_1337485	chr19_35051208_+	SINE	Alu	AluSx
CAediting_1337486	chr19_35051238_+	SINE	Alu	AluSx
CAediting_1337487	chr19_35051248_+	SINE	Alu	AluSx
CAediting_1337488	chr19_35051254_+	SINE	Alu	AluSx
CAediting_1337489	chr19_35051266_+	SINE	Alu	AluSx
CAediting_1337490	chr19_35051329_+	SINE	Alu	AluSx
CAediting_1337491	chr19_35051352_+	SINE	Alu	AluSx
CAediting_1337492	chr19_35051370_+	SINE	Alu	AluSx
CAediting_1337493	chr19_35051371_+	SINE	Alu	AluSx
CAediting_1337494	chr19_35051426_+	SINE	Alu	AluJr4
CAediting_1337495	chr19_35051429_+	SINE	Alu	AluJr4
CAediting_1337496	chr19_35051461_+	SINE	Alu	AluJr4
CAediting_1337497	chr19_35051499_+	SINE	Alu	AluJr4
CAediting_1337498	chr19_35051521_+	SINE	Alu	AluJr4
CAediting_1337499	chr19_35052272_+	SINE	Alu	AluSx1
CAediting_1337500	chr19_35052273_+	SINE	Alu	AluSx1
CAediting_1337501	chr19_35052278_+	SINE	Alu	AluSx1
CAediting_1337502	chr19_35052299_+	SINE	Alu	AluSx1
CAediting_1337503	chr19_35052303_+	SINE	Alu	AluSx1
CAediting_1337504	chr19_35052342_+	SINE	Alu	AluSx1
CAediting_1337505	chr19_35052351_+	SINE	Alu	AluSx1
CAediting_1337506	chr19_35052372_+	SINE	Alu	AluSx1
CAediting_1337507	chr19_35052385_+	SINE	Alu	AluSx1
CAediting_1337508	chr19_35052407_+	SINE	Alu	AluSx1
CAediting_1337509	chr19_35052408_+	SINE	Alu	AluSx1
CAediting_1337510	chr19_35052413_+	SINE	Alu	AluSx1
CAediting_1337511	chr19_35052417_+	SINE	Alu	AluSx1
CAediting_1337512	chr19_35052421_+	SINE	Alu	AluSx1
CAediting_1337513	chr19_35052430_+	SINE	Alu	AluSx1
CAediting_1337514	chr19_35052476_+	SINE	Alu	AluSx1
CAediting_1337515	chr19_35052480_+	SINE	Alu	AluSx1
CAediting_1337516	chr19_35052481_+	SINE	Alu	AluSx1
CAediting_1337517	chr19_35052490_+	SINE	Alu	AluSx1
CAediting_1337518	chr19_35052495_+	SINE	Alu	AluSx1
CAediting_1337519	chr19_35053495_+	SINE	Alu	AluSx1
CAediting_1337520	chr19_35053526_+	SINE	Alu	AluSx1
CAediting_1337521	chr19_35053566_+	SINE	Alu	AluSx1
CAediting_1337522	chr19_35053580_+	SINE	Alu	AluSx1
CAediting_1337523	chr19_35053583_+	SINE	Alu	AluSx1
CAediting_1337524	chr19_35053584_+	SINE	Alu	AluSx1
CAediting_1337525	chr19_35053585_+	SINE	Alu	AluSx1
CAediting_1337526	chr19_35053586_+	SINE	Alu	AluSx1
CAediting_1337527	chr19_35053587_+	SINE	Alu	AluSx1
CAediting_1337528	chr19_35053598_+	SINE	Alu	AluSx1
CAediting_1337529	chr19_35053624_+	SINE	Alu	AluSx1
CAediting_1337530	chr19_35053625_+	SINE	Alu	AluSx1
CAediting_1337531	chr19_35053630_+	SINE	Alu	AluSx1
CAediting_1337532	chr19_35053666_+	SINE	Alu	AluSx1
CAediting_1337533	chr19_35053670_+	SINE	Alu	AluSx1
CAediting_1337534	chr19_35053686_+	SINE	Alu	AluSx1
CAediting_1337535	chr19_35054163_+	SINE	Alu	AluSx
CAediting_1337536	chr19_35054171_+	SINE	Alu	AluSx
CAediting_1337537	chr19_35054184_+	SINE	Alu	AluSx
CAediting_1337538	chr19_35054189_+	SINE	Alu	AluSx
CAediting_1337539	chr19_35054208_+	SINE	Alu	AluSx
CAediting_1337540	chr19_35054210_+	SINE	Alu	AluSx
CAediting_1337541	chr19_35054211_+	SINE	Alu	AluSx
CAediting_1337542	chr19_35054240_+	SINE	Alu	AluSx
CAediting_1337543	chr19_35054267_+	SINE	Alu	AluSx
CAediting_1337544	chr19_35054271_+	SINE	Alu	AluSx
CAediting_1337545	chr19_35054275_+	SINE	Alu	AluSx
CAediting_1337546	chr19_35054281_+	SINE	Alu	AluSx
CAediting_1337547	chr19_35054284_+	SINE	Alu	AluSx
CAediting_1337548	chr19_35054298_+	SINE	Alu	AluSx
CAediting_1337549	chr19_35054338_+	SINE	Alu	AluSx
CAediting_1337550	chr19_35054359_+	SINE	Alu	AluSx
CAediting_1337551	chr19_35055126_+	SINE	Alu	FLAM_C
CAediting_1337552	chr19_35055128_+	SINE	Alu	FLAM_C
CAediting_1337553	chr19_35055250_+	SINE	Alu	AluJr
CAediting_1337554	chr19_35055322_+	SINE	Alu	AluJr
CAediting_1337555	chr19_35055339_+	SINE	Alu	AluJr
CAediting_1337556	chr19_35055346_+	SINE	Alu	AluJr
CAediting_1337557	chr19_35057157_+	SINE	Alu	AluSz
CAediting_1337558	chr19_35057191_+	SINE	Alu	AluSz
CAediting_1337559	chr19_35057200_+	SINE	Alu	AluSz
CAediting_1337560	chr19_35057247_+	SINE	Alu	AluSz
CAediting_1337561	chr19_35057263_+	SINE	Alu	AluSz
CAediting_1337562	chr19_35057269_+	SINE	Alu	AluSz
CAediting_1337563	chr19_35057279_+	SINE	Alu	AluSz
CAediting_1337564	chr19_35057305_+	SINE	Alu	AluSz
CAediting_1337565	chr19_35057311_+	SINE	Alu	AluSz
CAediting_1337566	chr19_35057332_+	SINE	Alu	AluSz
CAediting_1337567	chr19_35057365_+	SINE	Alu	AluSz
CAediting_1337568	chr19_35057367_+	SINE	Alu	AluSz
CAediting_1337569	chr19_35057375_+	SINE	Alu	AluSz
CAediting_1337570	chr19_35057376_+	SINE	Alu	AluSz
CAediting_1337571	chr19_35057889_+	SINE	Alu	AluSx
CAediting_1337572	chr19_35057896_+	SINE	Alu	AluSx
CAediting_1337573	chr19_35058006_+	SINE	Alu	AluSx
CAediting_1337574	chr19_35058032_+	SINE	Alu	AluSx
CAediting_1337575	chr19_35058033_+	SINE	Alu	AluSx
CAediting_1337576	chr19_35058074_+	SINE	Alu	AluSx
CAediting_1337577	chr19_35058224_+	SINE	Alu	AluSg7
CAediting_1337578	chr19_35058241_+	SINE	Alu	AluSg7
CAediting_1337579	chr19_35058273_+	SINE	Alu	AluSg7
CAediting_1337580	chr19_35058279_+	SINE	Alu	AluSg7
CAediting_1337581	chr19_35058280_+	SINE	Alu	AluSg7
CAediting_1337582	chr19_35058283_+	SINE	Alu	AluSg7
CAediting_1337583	chr19_35058297_+	SINE	Alu	AluSg7
CAediting_1337584	chr19_35058309_+	SINE	Alu	AluSg7
CAediting_1337585	chr19_35058319_+	SINE	Alu	AluSg7
CAediting_1337586	chr19_35058321_+	SINE	Alu	AluSg7
CAediting_1337587	chr19_35058370_+	SINE	Alu	AluSg7
CAediting_1337588	chr19_35058389_+	SINE	Alu	AluSg7
CAediting_1337589	chr19_35058421_+	SINE	Alu	AluSg7

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RNA A-to-I editing events in the alternative splicing sites for HPN

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000105707.12.HPN.

Correlation between RNA A-to-I editing and PSI for ENSG00000105707.12.HPN.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for HPN

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for HPN

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for HPN

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for HPN

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST

ENST type

RNA structure without RNA A-to-I editing.

RNA structure with RNA A-to-I editing.

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID

ENST

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

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Relation with ADAR for HPN

Correlation between ADAR gene expression and RNA editing frequency

Cancer	CAeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
LIHC	CAediting_1337415	chr19_35047716_+	0.00616711729563267	0.261966692186623	.	.	.	.
PRAD	CAediting_1337415	chr19_35047716_+	0.0280523327477883	0.171560503106332	.	.	.	.
PRAD	CAediting_1337441	chr19_35047874_+	0.00714301175510782	0.300423043695208	0.0420532231927905	0.22932687783877	.	.

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Relation with cancer stages for HPN

Correlation between Cancer stages and RNA editing frequency

Cancer	Stage_type	CAeditomID	position	P-val	Coeff.
LIHC	pathologic_stage	CAediting_1337415	chr19_35047716_+	0.0214546736137296	0.226426224969841

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Relation with survival for HPN

Correlation between RNA editing and survival

Cancer

CAeditomID

position

KMpvalue

Coxpvalue

CoxHR

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RelatedDrugs for HPN

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for HPN

Diseases associated with this gene.
(DisGeNet 7.0)

Gene	Disease ID	Disease name	# pubmeds	Source
HPN	C0023794	Lipoidosis	2	CTD_human
HPN	C0033578	Prostatic Neoplasms	2	CTD_human
HPN	C0376358	Malignant neoplasm of prostate	2	CTD_human

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene