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Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with cancer stages

Soverview

Relation with survival state

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene

Editing gene: HNF4A (CAeditome ID:3172)

Gene summary for HNF4A

check button Gene summary
Gene informationGene symbol

HNF4A

Gene ID

3172

Gene namehepatocyte nuclear factor 4 alpha
SynonymsFRTS4|HNF4|HNF4a7|HNF4a8|HNF4a9|HNF4alpha|MODY|MODY1|NR2A1|NR2A21|TCF|TCF-14|TCF14
Cytomap

20q13.12

Type of geneprotein-coding
Descriptionhepatocyte nuclear factor 4-alphaHNF4alpha10/11/12hepatic nuclear factor 4 alphanuclear receptor subfamily 2 group A member 1transcription factor 14transcription factor HNF-4
Modification date20210524
UniProtAcc

P41235

Context- 33628089(Research on the circadian clock gene HNF4a in different malignant tumors)

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID
HNF4A

GO:0045944

Hepatocyte nuclear factor 4-alpha

7615825

HNF4A

GO:0000976

Hepatocyte nuclear factor 4-alpha

16488887

HNF4A

GO:0003677

Hepatocyte nuclear factor 4-alpha

10551874

HNF4A

GO:0003677

Hepatocyte nuclear factor 4-alpha

7615825

HNF4A

GO:0003700

Hepatocyte nuclear factor 4-alpha

10330009

HNF4A

GO:0003700

Hepatocyte nuclear factor 4-alpha

12911579

HNF4A

GO:0003700

Hepatocyte nuclear factor 4-alpha

16488887

HNF4A

GO:0003700

Hepatocyte nuclear factor 4-alpha

7615825

HNF4A

GO:0005102

Hepatocyte nuclear factor 4-alpha

12220494

HNF4A

GO:0005504

Hepatocyte nuclear factor 4-alpha

12220494

HNF4A

GO:0042803

Hepatocyte nuclear factor 4-alpha

12220494

HNF4A

GO:1990837

Hepatocyte nuclear factor 4-alpha

28473536

HNF4A

GO:0006357

Hepatocyte nuclear factor 4-alpha

10330009

HNF4A

GO:0006357

Hepatocyte nuclear factor 4-alpha

12911579

HNF4A

GO:0007596

Hepatocyte nuclear factor 4-alpha

12911579

HNF4A

GO:0019216

Hepatocyte nuclear factor 4-alpha

10551874

HNF4A

GO:0045892

Hepatocyte nuclear factor 4-alpha

30530698

HNF4A

GO:0045893

Hepatocyte nuclear factor 4-alpha

16488887

HNF4A

GO:0005634

Hepatocyte nuclear factor 4-alpha

14563941

HNF4A

GO:0005634

Hepatocyte nuclear factor 4-alpha

15574752

HNF4A

GO:0005634

Hepatocyte nuclear factor 4-alpha

7615825

HNF4A

GO:0005654

Hepatocyte nuclear factor 4-alpha

0000052

HNF4A

GO:0005737

Hepatocyte nuclear factor 4-alpha

14563941


Top

RNA A-to-I events for HNF4A

check buttonRNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.
all structure

check button RNA editing frequencies across 33 cancers of gene: ENSG00000101076.15
boxplot

check button RNA A-to-I editing events in Cancer.
CAediting_1429670(44358354, +), CAediting_1429671(44358360, +), CAediting_1429672(44358385, +), CAediting_1429673(44358409, +), CAediting_1429674(44358431, +), CAediting_1429675(44358432, +), CAediting_1429676(44358434, +), CAediting_1429677(44358445, +), CAediting_1429678(44358463, +), CAediting_1429679(44358479, +), CAediting_1429680(44358489, +), CAediting_1429681(44358525, +), CAediting_1429682(44358538, +), CAediting_1429683(44358542, +), CAediting_1429684(44358555, +), CAediting_1429685(44358599, +), CAediting_1429686(44362269, +), CAediting_1429687(44362273, +), CAediting_1429688(44365248, +), CAediting_1429689(44365308, +), CAediting_1429690(44365310, +), CAediting_1429691(44366349, +), CAediting_1429692(44366357, +), CAediting_1429693(44366470, +), CAediting_1429694(44366501, +), CAediting_1429695(44366523, +), CAediting_1429696(44366540, +), CAediting_1429697(44366541, +), CAediting_1429698(44367087, +), CAediting_1429699(44367102, +), CAediting_1429700(44367103, +), CAediting_1429701(44367108, +), CAediting_1429702(44367121, +), CAediting_1429703(44367146, +), CAediting_1429704(44367185, +), CAediting_1429705(44367192, +), CAediting_1429706(44367215, +), CAediting_1429707(44367220, +), CAediting_1429708(44367241, +), CAediting_1429709(44367256, +), CAediting_1429710(44367260, +), CAediting_1429711(44367280, +), CAediting_1429712(44367287, +), CAediting_1429713(44367368, +), CAediting_1429714(44367399, +), CAediting_1429715(44367405, +), CAediting_1429716(44367434, +), CAediting_1429717(44367443, +), CAediting_1429718(44367483, +), CAediting_1429719(44367484, +), CAediting_1429720(44367485, +), CAediting_1429721(44367488, +), CAediting_1429722(44367520, +), CAediting_1429723(44367562, +), CAediting_1429724(44367591, +), CAediting_1429725(44367598, +), CAediting_1429726(44367627, +), CAediting_1429727(44367686, +), CAediting_1429728(44367718, +), CAediting_1429729(44367731, +), CAediting_1429730(44367745, +), CAediting_1429731(44368267, +), CAediting_1429732(44368270, +), CAediting_1429733(44368328, +), CAediting_1429734(44368332, +), CAediting_1429735(44368339, +), CAediting_1429736(44368402, +), CAediting_1429737(44368429, +), CAediting_1429738(44368443, +), CAediting_1429739(44368974, +), CAediting_1429740(44368984, +), CAediting_1429741(44368993, +), CAediting_1429742(44369036, +), CAediting_1429743(44369351, +), CAediting_1429744(44369715, +), CAediting_1429745(44369728, +), CAediting_1429746(44369747, +), CAediting_1429747(44369774, +), CAediting_1429748(44370107, +), CAediting_1429749(44370234, +), CAediting_1429750(44371309, +), CAediting_1429751(44371378, +), CAediting_1429752(44371381, +), CAediting_1429753(44371407, +), CAediting_1429754(44371459, +), CAediting_1429755(44371462, +), CAediting_1429756(44371479, +), CAediting_1429757(44371563, +), CAediting_1429758(44371660, +), CAediting_1429759(44371678, +), CAediting_1429760(44371682, +), CAediting_1429761(44371718, +), CAediting_1429762(44371731, +), CAediting_1429763(44404274, +), CAediting_1429764(44408447, +), CAediting_1429765(44408469, +), CAediting_1429766(44408470, +), CAediting_1429767(44408515, +), CAediting_1429768(44408516, +), CAediting_1429769(44408538, +), CAediting_1429770(44408539, +), CAediting_1429771(44408541, +), CAediting_1429772(44408546, +), CAediting_1429773(44408547, +), CAediting_1429774(44408549, +), CAediting_1429775(44408606, +), CAediting_1429776(44408633, +), CAediting_1429777(44408647, +), CAediting_1429778(44408653, +), CAediting_1429779(44409967, +), CAediting_1429780(44410039, +), CAediting_1429781(44410107, +), CAediting_1429782(44411836, +), CAediting_1429783(44411840, +), CAediting_1429784(44411841, +), CAediting_1429785(44411842, +), CAediting_1429786(44411846, +), CAediting_1429787(44411910, +), CAediting_1429788(44411934, +), CAediting_1429789(44411936, +), CAediting_1429790(44411937, +), CAediting_1429791(44411942, +), CAediting_1429792(44420060, +), CAediting_1429793(44420070, +), CAediting_1429794(44420117, +), CAediting_1429795(44420130, +), CAediting_1429796(44420211, +), CAediting_1429797(44420212, +), CAediting_1429798(44420238, +), CAediting_1429799(44420252, +), CAediting_1429800(44420282, +), CAediting_1429801(44420524, +), CAediting_1429802(44420525, +), CAediting_1429803(44420551, +), CAediting_1429804(44420554, +), CAediting_1429805(44420598, +), CAediting_1429806(44420644, +), CAediting_1429807(44420743, +), CAediting_1429808(44420775, +), CAediting_1429809(44421521, +), CAediting_1429810(44421525, +), CAediting_1429811(44421544, +), CAediting_1429812(44421552, +), CAediting_1429813(44421553, +), CAediting_1429814(44421558, +), CAediting_1429815(44421567, +), CAediting_1429816(44421568, +), CAediting_1429817(44421570, +), CAediting_1429818(44421576, +), CAediting_1429819(44421577, +), CAediting_1429820(44421578, +), CAediting_1429821(44421592, +), CAediting_1429822(44421598, +), CAediting_1429823(44421603, +), CAediting_1429824(44421633, +), CAediting_1429825(44421634, +), CAediting_1429826(44421660, +), CAediting_1429827(44421663, +), CAediting_1429828(44421666, +), CAediting_1429829(44421674, +), CAediting_1429830(44421682, +), CAediting_1429831(44421699, +), CAediting_1429832(44421704, +), CAediting_1429833(44421709, +), CAediting_1429834(44422044, +), CAediting_1429835(44422080, +), CAediting_1429836(44422741, +), CAediting_1429837(44422754, +), CAediting_1429838(44422766, +), CAediting_1429839(44422773, +), CAediting_1429840(44422779, +), CAediting_1429841(44422780, +), CAediting_1429842(44422792, +), CAediting_1429843(44422797, +), CAediting_1429844(44422818, +), CAediting_1429845(44422820, +), CAediting_1429846(44422824, +), CAediting_1429847(44422834, +), CAediting_1429848(44422844, +), CAediting_1429849(44422853, +), CAediting_1429850(44422859, +), CAediting_1429851(44422862, +), CAediting_1429852(44422864, +), CAediting_1429853(44422876, +), CAediting_1429854(44422881, +), CAediting_1429855(44422888, +), CAediting_1429856(44422899, +), CAediting_1429857(44422900, +), CAediting_1429858(44422901, +), CAediting_1429859(44422908, +), CAediting_1429860(44422913, +), CAediting_1429861(44422914, +), CAediting_1429862(44422953, +), CAediting_1429863(44422959, +), CAediting_1429864(44423068, +), CAediting_1429865(44423084, +), CAediting_1429866(44423092, +), CAediting_1429867(44423102, +), CAediting_1429868(44423107, +), CAediting_1429869(44423109, +), CAediting_1429870(44423110, +), CAediting_1429871(44423121, +), CAediting_1429872(44423127, +), CAediting_1429873(44423130, +), CAediting_1429874(44423155, +), CAediting_1429875(44423160, +), CAediting_1429876(44423163, +), CAediting_1429877(44423169, +), CAediting_1429878(44423196, +), CAediting_1429879(44423222, +), CAediting_1429880(44423228, +), CAediting_1429881(44423236, +), CAediting_1429882(44423271, +), CAediting_1429883(44425005, +), CAediting_1429884(44425006, +), CAediting_1429885(44425045, +), CAediting_1429886(44425046, +), CAediting_1429887(44425156, +), CAediting_1429888(44425168, +), CAediting_1429889(44425181, +), CAediting_1429890(44425193, +), CAediting_1429891(44425194, +), CAediting_1429892(44425204, +), CAediting_1429893(44425218, +), CAediting_1429894(44425219, +), CAediting_1429895(44425226, +), CAediting_1429896(44425230, +), CAediting_1429897(44425244, +), CAediting_1429898(44425245, +), CAediting_1429899(44425676, +), CAediting_1429900(44425694, +), CAediting_1429901(44425748, +), CAediting_1429902(44425754, +), CAediting_1429903(44425755, +), CAediting_1429904(44425757, +), CAediting_1429905(44425767, +), CAediting_1429906(44425772, +), CAediting_1429907(44425780, +), CAediting_1429908(44425781, +), CAediting_1429909(44425784, +), CAediting_1429910(44425794, +), CAediting_1429911(44425816, +), CAediting_1429912(44425857, +), CAediting_1429913(44425869, +), CAediting_1429914(44425882, +), CAediting_1429915(44425888, +), CAediting_1429916(44425895, +), CAediting_1429917(44425898, +), CAediting_1429918(44425899, +), CAediting_1429919(44425920, +), CAediting_1429920(44425921, +), CAediting_1429921(44425922, +), CAediting_1429922(44425934, +), CAediting_1429923(44425943, +), CAediting_1429924(44426540, +), CAediting_1429925(44426542, +), CAediting_1429926(44426548, +), CAediting_1429927(44426549, +), CAediting_1429928(44426571, +), CAediting_1429929(44426584, +), CAediting_1429930(44426589, +), CAediting_1429931(44426594, +), CAediting_1429932(44426602, +), CAediting_1429933(44426603, +), CAediting_1429934(44426617, +), CAediting_1429935(44426621, +), CAediting_1429936(44426624, +), CAediting_1429937(44426626, +), CAediting_1429938(44426627, +), CAediting_1429939(44426650, +), CAediting_1429940(44426657, +), CAediting_1429941(44426660, +), CAediting_1429942(44426664, +), CAediting_1429943(44426676, +), CAediting_1429944(44426680, +), CAediting_1429945(44426686, +), CAediting_1429946(44426687, +), CAediting_1429947(44426692, +), CAediting_1429948(44426696, +), CAediting_1429949(44426709, +), CAediting_1429950(44426713, +), CAediting_1429951(44426722, +), CAediting_1429952(44426728, +), CAediting_1429953(44426747, +), CAediting_1429954(44426748, +), CAediting_1429955(44426752, +), CAediting_1429956(44426757, +), CAediting_1429957(44426759, +), CAediting_1429958(44426762, +), CAediting_1429959(44426791, +),

Top

RNA editing positional annotations for HNF4A using Annovar

check button Protein coding RNA editing(s).
CAeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred

check button Gene structure information of RNA editing(s).
CAeditome IDPositionVariant type
CAediting_1429670chr20_44358354_+intronic
CAediting_1429671chr20_44358360_+intronic
CAediting_1429672chr20_44358385_+intronic
CAediting_1429673chr20_44358409_+intronic
CAediting_1429674chr20_44358431_+intronic
CAediting_1429675chr20_44358432_+intronic
CAediting_1429676chr20_44358434_+intronic
CAediting_1429677chr20_44358445_+intronic
CAediting_1429678chr20_44358463_+intronic
CAediting_1429679chr20_44358479_+intronic
CAediting_1429680chr20_44358489_+intronic
CAediting_1429681chr20_44358525_+intronic
CAediting_1429682chr20_44358538_+intronic
CAediting_1429683chr20_44358542_+intronic
CAediting_1429684chr20_44358555_+intronic
CAediting_1429685chr20_44358599_+intronic
CAediting_1429686chr20_44362269_+intronic
CAediting_1429687chr20_44362273_+intronic
CAediting_1429688chr20_44365248_+intronic
CAediting_1429689chr20_44365308_+intronic
CAediting_1429690chr20_44365310_+intronic
CAediting_1429691chr20_44366349_+intronic
CAediting_1429692chr20_44366357_+intronic
CAediting_1429693chr20_44366470_+intronic
CAediting_1429694chr20_44366501_+intronic
CAediting_1429695chr20_44366523_+intronic
CAediting_1429696chr20_44366540_+intronic
CAediting_1429697chr20_44366541_+intronic
CAediting_1429698chr20_44367087_+intronic
CAediting_1429699chr20_44367102_+intronic
CAediting_1429700chr20_44367103_+intronic
CAediting_1429701chr20_44367108_+intronic
CAediting_1429702chr20_44367121_+intronic
CAediting_1429703chr20_44367146_+intronic
CAediting_1429704chr20_44367185_+intronic
CAediting_1429705chr20_44367192_+intronic
CAediting_1429706chr20_44367215_+intronic
CAediting_1429707chr20_44367220_+intronic
CAediting_1429708chr20_44367241_+intronic
CAediting_1429709chr20_44367256_+intronic
CAediting_1429710chr20_44367260_+intronic
CAediting_1429711chr20_44367280_+intronic
CAediting_1429712chr20_44367287_+intronic
CAediting_1429713chr20_44367368_+intronic
CAediting_1429714chr20_44367399_+intronic
CAediting_1429715chr20_44367405_+intronic
CAediting_1429716chr20_44367434_+intronic
CAediting_1429717chr20_44367443_+intronic
CAediting_1429718chr20_44367483_+intronic
CAediting_1429719chr20_44367484_+intronic
CAediting_1429720chr20_44367485_+intronic
CAediting_1429721chr20_44367488_+intronic
CAediting_1429722chr20_44367520_+intronic
CAediting_1429723chr20_44367562_+intronic
CAediting_1429724chr20_44367591_+intronic
CAediting_1429725chr20_44367598_+intronic
CAediting_1429726chr20_44367627_+intronic
CAediting_1429727chr20_44367686_+intronic
CAediting_1429728chr20_44367718_+intronic
CAediting_1429729chr20_44367731_+intronic
CAediting_1429730chr20_44367745_+intronic
CAediting_1429731chr20_44368267_+intronic
CAediting_1429732chr20_44368270_+intronic
CAediting_1429733chr20_44368328_+intronic
CAediting_1429734chr20_44368332_+intronic
CAediting_1429735chr20_44368339_+intronic
CAediting_1429736chr20_44368402_+intronic
CAediting_1429737chr20_44368429_+intronic
CAediting_1429738chr20_44368443_+intronic
CAediting_1429739chr20_44368974_+intronic
CAediting_1429740chr20_44368984_+intronic
CAediting_1429741chr20_44368993_+intronic
CAediting_1429742chr20_44369036_+intronic
CAediting_1429743chr20_44369351_+intronic
CAediting_1429744chr20_44369715_+intronic
CAediting_1429745chr20_44369728_+intronic
CAediting_1429746chr20_44369747_+intronic
CAediting_1429747chr20_44369774_+intronic
CAediting_1429748chr20_44370107_+intronic
CAediting_1429749chr20_44370234_+intronic
CAediting_1429750chr20_44371309_+intronic
CAediting_1429751chr20_44371378_+intronic
CAediting_1429752chr20_44371381_+intronic
CAediting_1429753chr20_44371407_+intronic
CAediting_1429754chr20_44371459_+intronic
CAediting_1429755chr20_44371462_+intronic
CAediting_1429756chr20_44371479_+intronic
CAediting_1429757chr20_44371563_+intronic
CAediting_1429758chr20_44371660_+intronic
CAediting_1429759chr20_44371678_+intronic
CAediting_1429760chr20_44371682_+intronic
CAediting_1429761chr20_44371718_+intronic
CAediting_1429762chr20_44371731_+intronic
CAediting_1429763chr20_44404274_+intronic
CAediting_1429764chr20_44408447_+intronic
CAediting_1429765chr20_44408469_+intronic
CAediting_1429766chr20_44408470_+intronic
CAediting_1429767chr20_44408515_+intronic
CAediting_1429768chr20_44408516_+intronic
CAediting_1429769chr20_44408538_+intronic
CAediting_1429770chr20_44408539_+intronic
CAediting_1429771chr20_44408541_+intronic
CAediting_1429772chr20_44408546_+intronic
CAediting_1429773chr20_44408547_+intronic
CAediting_1429774chr20_44408549_+intronic
CAediting_1429775chr20_44408606_+intronic
CAediting_1429776chr20_44408633_+intronic
CAediting_1429777chr20_44408647_+intronic
CAediting_1429778chr20_44408653_+intronic
CAediting_1429779chr20_44409967_+intronic
CAediting_1429780chr20_44410039_+intronic
CAediting_1429781chr20_44410107_+intronic
CAediting_1429782chr20_44411836_+intronic
CAediting_1429783chr20_44411840_+intronic
CAediting_1429784chr20_44411841_+intronic
CAediting_1429785chr20_44411842_+intronic
CAediting_1429786chr20_44411846_+intronic
CAediting_1429787chr20_44411910_+intronic
CAediting_1429788chr20_44411934_+intronic
CAediting_1429789chr20_44411936_+intronic
CAediting_1429790chr20_44411937_+intronic
CAediting_1429791chr20_44411942_+intronic
CAediting_1429792chr20_44420060_+intronic
CAediting_1429793chr20_44420070_+intronic
CAediting_1429794chr20_44420117_+intronic
CAediting_1429795chr20_44420130_+intronic
CAediting_1429796chr20_44420211_+intronic
CAediting_1429797chr20_44420212_+intronic
CAediting_1429798chr20_44420238_+intronic
CAediting_1429799chr20_44420252_+intronic
CAediting_1429800chr20_44420282_+intronic
CAediting_1429801chr20_44420524_+intronic
CAediting_1429802chr20_44420525_+intronic
CAediting_1429803chr20_44420551_+intronic
CAediting_1429804chr20_44420554_+intronic
CAediting_1429805chr20_44420598_+intronic
CAediting_1429806chr20_44420644_+intronic
CAediting_1429807chr20_44420743_+intronic
CAediting_1429808chr20_44420775_+intronic
CAediting_1429809chr20_44421521_+intronic
CAediting_1429810chr20_44421525_+intronic
CAediting_1429811chr20_44421544_+intronic
CAediting_1429812chr20_44421552_+intronic
CAediting_1429813chr20_44421553_+intronic
CAediting_1429814chr20_44421558_+intronic
CAediting_1429815chr20_44421567_+intronic
CAediting_1429816chr20_44421568_+intronic
CAediting_1429817chr20_44421570_+intronic
CAediting_1429818chr20_44421576_+intronic
CAediting_1429819chr20_44421577_+intronic
CAediting_1429820chr20_44421578_+intronic
CAediting_1429821chr20_44421592_+intronic
CAediting_1429822chr20_44421598_+intronic
CAediting_1429823chr20_44421603_+intronic
CAediting_1429824chr20_44421633_+intronic
CAediting_1429825chr20_44421634_+intronic
CAediting_1429826chr20_44421660_+intronic
CAediting_1429827chr20_44421663_+intronic
CAediting_1429828chr20_44421666_+intronic
CAediting_1429829chr20_44421674_+intronic
CAediting_1429830chr20_44421682_+intronic
CAediting_1429831chr20_44421699_+intronic
CAediting_1429832chr20_44421704_+intronic
CAediting_1429833chr20_44421709_+intronic
CAediting_1429834chr20_44422044_+intronic
CAediting_1429835chr20_44422080_+intronic
CAediting_1429836chr20_44422741_+intronic
CAediting_1429837chr20_44422754_+intronic
CAediting_1429838chr20_44422766_+intronic
CAediting_1429839chr20_44422773_+intronic
CAediting_1429840chr20_44422779_+intronic
CAediting_1429841chr20_44422780_+intronic
CAediting_1429842chr20_44422792_+intronic
CAediting_1429843chr20_44422797_+intronic
CAediting_1429844chr20_44422818_+intronic
CAediting_1429845chr20_44422820_+intronic
CAediting_1429846chr20_44422824_+intronic
CAediting_1429847chr20_44422834_+intronic
CAediting_1429848chr20_44422844_+intronic
CAediting_1429849chr20_44422853_+intronic
CAediting_1429850chr20_44422859_+intronic
CAediting_1429851chr20_44422862_+intronic
CAediting_1429852chr20_44422864_+intronic
CAediting_1429853chr20_44422876_+intronic
CAediting_1429854chr20_44422881_+intronic
CAediting_1429855chr20_44422888_+intronic
CAediting_1429856chr20_44422899_+intronic
CAediting_1429857chr20_44422900_+intronic
CAediting_1429858chr20_44422901_+intronic
CAediting_1429859chr20_44422908_+intronic
CAediting_1429860chr20_44422913_+intronic
CAediting_1429861chr20_44422914_+intronic
CAediting_1429862chr20_44422953_+intronic
CAediting_1429863chr20_44422959_+intronic
CAediting_1429864chr20_44423068_+intronic
CAediting_1429865chr20_44423084_+intronic
CAediting_1429866chr20_44423092_+intronic
CAediting_1429867chr20_44423102_+intronic
CAediting_1429868chr20_44423107_+intronic
CAediting_1429869chr20_44423109_+intronic
CAediting_1429870chr20_44423110_+intronic
CAediting_1429871chr20_44423121_+intronic
CAediting_1429872chr20_44423127_+intronic
CAediting_1429873chr20_44423130_+intronic
CAediting_1429874chr20_44423155_+intronic
CAediting_1429875chr20_44423160_+intronic
CAediting_1429876chr20_44423163_+intronic
CAediting_1429877chr20_44423169_+intronic
CAediting_1429878chr20_44423196_+intronic
CAediting_1429879chr20_44423222_+intronic
CAediting_1429880chr20_44423228_+intronic
CAediting_1429881chr20_44423236_+intronic
CAediting_1429882chr20_44423271_+intronic
CAediting_1429883chr20_44425005_+intronic
CAediting_1429884chr20_44425006_+intronic
CAediting_1429885chr20_44425045_+intronic
CAediting_1429886chr20_44425046_+intronic
CAediting_1429887chr20_44425156_+intronic
CAediting_1429888chr20_44425168_+intronic
CAediting_1429889chr20_44425181_+intronic
CAediting_1429890chr20_44425193_+intronic
CAediting_1429891chr20_44425194_+intronic
CAediting_1429892chr20_44425204_+intronic
CAediting_1429893chr20_44425218_+intronic
CAediting_1429894chr20_44425219_+intronic
CAediting_1429895chr20_44425226_+intronic
CAediting_1429896chr20_44425230_+intronic
CAediting_1429897chr20_44425244_+intronic
CAediting_1429898chr20_44425245_+intronic
CAediting_1429899chr20_44425676_+intronic
CAediting_1429900chr20_44425694_+intronic
CAediting_1429901chr20_44425748_+intronic
CAediting_1429902chr20_44425754_+intronic
CAediting_1429903chr20_44425755_+intronic
CAediting_1429904chr20_44425757_+intronic
CAediting_1429905chr20_44425767_+intronic
CAediting_1429906chr20_44425772_+intronic
CAediting_1429907chr20_44425780_+intronic
CAediting_1429908chr20_44425781_+intronic
CAediting_1429909chr20_44425784_+intronic
CAediting_1429910chr20_44425794_+intronic
CAediting_1429911chr20_44425816_+intronic
CAediting_1429912chr20_44425857_+intronic
CAediting_1429913chr20_44425869_+intronic
CAediting_1429914chr20_44425882_+intronic
CAediting_1429915chr20_44425888_+intronic
CAediting_1429916chr20_44425895_+intronic
CAediting_1429917chr20_44425898_+intronic
CAediting_1429918chr20_44425899_+intronic
CAediting_1429919chr20_44425920_+intronic
CAediting_1429920chr20_44425921_+intronic
CAediting_1429921chr20_44425922_+intronic
CAediting_1429922chr20_44425934_+intronic
CAediting_1429923chr20_44425943_+intronic
CAediting_1429924chr20_44426540_+intronic
CAediting_1429925chr20_44426542_+intronic
CAediting_1429926chr20_44426548_+intronic
CAediting_1429927chr20_44426549_+intronic
CAediting_1429928chr20_44426571_+intronic
CAediting_1429929chr20_44426584_+intronic
CAediting_1429930chr20_44426589_+intronic
CAediting_1429931chr20_44426594_+intronic
CAediting_1429932chr20_44426602_+intronic
CAediting_1429933chr20_44426603_+intronic
CAediting_1429934chr20_44426617_+intronic
CAediting_1429935chr20_44426621_+intronic
CAediting_1429936chr20_44426624_+intronic
CAediting_1429937chr20_44426626_+intronic
CAediting_1429938chr20_44426627_+intronic
CAediting_1429939chr20_44426650_+intronic
CAediting_1429940chr20_44426657_+intronic
CAediting_1429941chr20_44426660_+intronic
CAediting_1429942chr20_44426664_+intronic
CAediting_1429943chr20_44426676_+intronic
CAediting_1429944chr20_44426680_+intronic
CAediting_1429945chr20_44426686_+intronic
CAediting_1429946chr20_44426687_+intronic
CAediting_1429947chr20_44426692_+intronic
CAediting_1429948chr20_44426696_+intronic
CAediting_1429949chr20_44426709_+intronic
CAediting_1429950chr20_44426713_+intronic
CAediting_1429951chr20_44426722_+intronic
CAediting_1429952chr20_44426728_+intronic
CAediting_1429953chr20_44426747_+intronic
CAediting_1429954chr20_44426748_+intronic
CAediting_1429955chr20_44426752_+intronic
CAediting_1429956chr20_44426757_+intronic
CAediting_1429957chr20_44426759_+intronic
CAediting_1429958chr20_44426762_+intronic
CAediting_1429959chr20_44426791_+intronic

check button Repat-regional RNA editing(s).
CAeditome IDPositionRepeat familyRepeat sub familyRepeat name
CAediting_1429670chr20_44358354_+SINEAluAluSz6
CAediting_1429671chr20_44358360_+SINEAluAluSz6
CAediting_1429672chr20_44358385_+SINEAluAluSz6
CAediting_1429673chr20_44358409_+SINEAluAluSz6
CAediting_1429674chr20_44358431_+SINEAluAluSz6
CAediting_1429675chr20_44358432_+SINEAluAluSz6
CAediting_1429676chr20_44358434_+SINEAluAluSz6
CAediting_1429677chr20_44358445_+SINEAluAluSz6
CAediting_1429678chr20_44358463_+SINEAluAluSz6
CAediting_1429679chr20_44358479_+SINEAluAluSz6
CAediting_1429680chr20_44358489_+SINEAluAluSz6
CAediting_1429681chr20_44358525_+SINEAluAluSz6
CAediting_1429682chr20_44358538_+SINEAluAluSz6
CAediting_1429683chr20_44358542_+SINEAluAluSz6
CAediting_1429684chr20_44358555_+SINEAluAluSz6
CAediting_1429685chr20_44358599_+SINEAluAluSz6
CAediting_1429686chr20_44362269_+SINEAluAluSx1
CAediting_1429687chr20_44362273_+SINEAluAluSx1
CAediting_1429688chr20_44365248_+SINEAluAluJr
CAediting_1429689chr20_44365308_+SINEAluAluJr
CAediting_1429690chr20_44365310_+SINEAluAluJr
CAediting_1429691chr20_44366349_+SINEAluAluSz
CAediting_1429692chr20_44366357_+SINEAluAluSz
CAediting_1429693chr20_44366470_+SINEAluAluSz
CAediting_1429694chr20_44366501_+SINEAluAluSz
CAediting_1429695chr20_44366523_+SINEAluAluSz
CAediting_1429696chr20_44366540_+SINEAluAluSz
CAediting_1429697chr20_44366541_+SINEAluAluSz
CAediting_1429698chr20_44367087_+SINEAluAluSp
CAediting_1429699chr20_44367102_+SINEAluAluSp
CAediting_1429700chr20_44367103_+SINEAluAluSp
CAediting_1429701chr20_44367108_+SINEAluAluSp
CAediting_1429702chr20_44367121_+SINEAluAluSp
CAediting_1429703chr20_44367146_+SINEAluAluSp
CAediting_1429704chr20_44367185_+SINEAluAluSp
CAediting_1429705chr20_44367192_+SINEAluAluSp
CAediting_1429706chr20_44367215_+SINEAluAluSp
CAediting_1429707chr20_44367220_+SINEAluAluSp
CAediting_1429708chr20_44367241_+SINEAluAluSp
CAediting_1429709chr20_44367256_+SINEAluAluSp
CAediting_1429710chr20_44367260_+SINEAluAluSp
CAediting_1429711chr20_44367280_+SINEAluAluSp
CAediting_1429712chr20_44367287_+SINEAluAluSp
CAediting_1429713chr20_44367368_+SINEAluAluSc
CAediting_1429714chr20_44367399_+SINEAluAluSc
CAediting_1429715chr20_44367405_+SINEAluAluSc
CAediting_1429716chr20_44367434_+SINEAluAluSc
CAediting_1429717chr20_44367443_+SINEAluAluSc
CAediting_1429718chr20_44367483_+SINEAluAluSc
CAediting_1429719chr20_44367484_+SINEAluAluSc
CAediting_1429720chr20_44367485_+SINEAluAluSc
CAediting_1429721chr20_44367488_+SINEAluAluSc
CAediting_1429722chr20_44367520_+SINEAluAluSc
CAediting_1429723chr20_44367562_+SINEAluAluSc
CAediting_1429724chr20_44367591_+SINEAluAluSc
CAediting_1429725chr20_44367598_+SINEAluAluSc
CAediting_1429726chr20_44367627_+SINEAluAluSc
CAediting_1429727chr20_44367686_+SINEAluAluJr
CAediting_1429728chr20_44367718_+SINEAluAluJr
CAediting_1429729chr20_44367731_+SINEAluAluJr
CAediting_1429730chr20_44367745_+SINEAluAluJr
CAediting_1429731chr20_44368267_+SINEAluAluSz6
CAediting_1429732chr20_44368270_+SINEAluAluSz6
CAediting_1429733chr20_44368328_+SINEAluAluSz6
CAediting_1429734chr20_44368332_+SINEAluAluSz6
CAediting_1429735chr20_44368339_+SINEAluAluSz6
CAediting_1429736chr20_44368402_+SINEAluAluSz6
CAediting_1429737chr20_44368429_+SINEAluAluSz6
CAediting_1429738chr20_44368443_+SINEAluAluSz6
CAediting_1429739chr20_44368974_+SINEAluAluSq4
CAediting_1429740chr20_44368984_+SINEAluAluSq4
CAediting_1429741chr20_44368993_+SINEAluAluSq4
CAediting_1429742chr20_44369036_+SINEAluAluSq4
CAediting_1429743chr20_44369351_+SINEAluFRAM
CAediting_1429744chr20_44369715_+SINEAluAluSz
CAediting_1429745chr20_44369728_+SINEAluAluSz
CAediting_1429746chr20_44369747_+SINEAluAluSz
CAediting_1429747chr20_44369774_+SINEAluAluSz
CAediting_1429748chr20_44370107_+SINEAluAluYk2
CAediting_1429749chr20_44370234_+SINEAluAluYk2
CAediting_1429750chr20_44371309_+SINEAluAluSq2
CAediting_1429751chr20_44371378_+SINEAluAluSq2
CAediting_1429752chr20_44371381_+SINEAluAluSq2
CAediting_1429753chr20_44371407_+SINEAluAluSq2
CAediting_1429754chr20_44371459_+SINEAluAluSq2
CAediting_1429755chr20_44371462_+SINEAluAluSq2
CAediting_1429756chr20_44371479_+SINEAluAluSq2
CAediting_1429757chr20_44371563_+SINEAluAluSz
CAediting_1429758chr20_44371660_+SINEAluAluSz
CAediting_1429759chr20_44371678_+SINEAluAluSz
CAediting_1429760chr20_44371682_+SINEAluAluSz
CAediting_1429761chr20_44371718_+SINEAluAluSz
CAediting_1429762chr20_44371731_+SINEAluAluSz
CAediting_1429763chr20_44404274_+SINEMIRMIR
CAediting_1429764chr20_44408447_+SINEAluAluSz
CAediting_1429765chr20_44408469_+SINEAluAluSz
CAediting_1429766chr20_44408470_+SINEAluAluSz
CAediting_1429767chr20_44408515_+SINEAluAluSz
CAediting_1429768chr20_44408516_+SINEAluAluSz
CAediting_1429769chr20_44408538_+SINEAluAluSz
CAediting_1429770chr20_44408539_+SINEAluAluSz
CAediting_1429771chr20_44408541_+SINEAluAluSz
CAediting_1429772chr20_44408546_+SINEAluAluSz
CAediting_1429773chr20_44408547_+SINEAluAluSz
CAediting_1429774chr20_44408549_+SINEAluAluSz
CAediting_1429775chr20_44408606_+SINEAluAluSz
CAediting_1429776chr20_44408633_+SINEAluAluSz
CAediting_1429777chr20_44408647_+SINEAluAluSz
CAediting_1429778chr20_44408653_+SINEAluAluSz
CAediting_1429779chr20_44409967_+SINEAluAluSq2
CAediting_1429780chr20_44410039_+SINEAluAluSq2
CAediting_1429781chr20_44410107_+SINEAluAluSq2
CAediting_1429782chr20_44411836_+SINEAluAluJr
CAediting_1429783chr20_44411840_+SINEAluAluJr
CAediting_1429784chr20_44411841_+SINEAluAluJr
CAediting_1429785chr20_44411842_+SINEAluAluJr
CAediting_1429786chr20_44411846_+SINEAluAluJr
CAediting_1429787chr20_44411910_+SINEAluAluJr
CAediting_1429788chr20_44411934_+SINEAluAluJr
CAediting_1429789chr20_44411936_+SINEAluAluJr
CAediting_1429790chr20_44411937_+SINEAluAluJr
CAediting_1429791chr20_44411942_+SINEAluAluJr
CAediting_1429792chr20_44420060_+SINEAluAluSx
CAediting_1429793chr20_44420070_+SINEAluAluSx
CAediting_1429794chr20_44420117_+SINEAluAluSx
CAediting_1429795chr20_44420130_+SINEAluAluSx
CAediting_1429796chr20_44420211_+SINEAluAluSx
CAediting_1429797chr20_44420212_+SINEAluAluSx
CAediting_1429798chr20_44420238_+SINEAluAluSx
CAediting_1429799chr20_44420252_+SINEAluAluSx
CAediting_1429800chr20_44420282_+SINEAluAluSx
CAediting_1429801chr20_44420524_+SINEAluAluJr
CAediting_1429802chr20_44420525_+SINEAluAluJr
CAediting_1429803chr20_44420551_+SINEAluAluJr
CAediting_1429804chr20_44420554_+SINEAluAluJr
CAediting_1429805chr20_44420598_+SINEAluAluJr
CAediting_1429806chr20_44420644_+SINEAluAluJr
CAediting_1429807chr20_44420743_+SINEAluAluJr
CAediting_1429808chr20_44420775_+SINEAluAluJr
CAediting_1429809chr20_44421521_+SINEAluAluSq2
CAediting_1429810chr20_44421525_+SINEAluAluSq2
CAediting_1429811chr20_44421544_+SINEAluAluSq2
CAediting_1429812chr20_44421552_+SINEAluAluSq2
CAediting_1429813chr20_44421553_+SINEAluAluSq2
CAediting_1429814chr20_44421558_+SINEAluAluSq2
CAediting_1429815chr20_44421567_+SINEAluAluSq2
CAediting_1429816chr20_44421568_+SINEAluAluSq2
CAediting_1429817chr20_44421570_+SINEAluAluSq2
CAediting_1429818chr20_44421576_+SINEAluAluSq2
CAediting_1429819chr20_44421577_+SINEAluAluSq2
CAediting_1429820chr20_44421578_+SINEAluAluSq2
CAediting_1429821chr20_44421592_+SINEAluAluSq2
CAediting_1429822chr20_44421598_+SINEAluAluSq2
CAediting_1429823chr20_44421603_+SINEAluAluSq2
CAediting_1429824chr20_44421633_+SINEAluAluSq2
CAediting_1429825chr20_44421634_+SINEAluAluSq2
CAediting_1429826chr20_44421660_+SINEAluAluSq2
CAediting_1429827chr20_44421663_+SINEAluAluSq2
CAediting_1429828chr20_44421666_+SINEAluAluSq2
CAediting_1429829chr20_44421674_+SINEAluAluSq2
CAediting_1429830chr20_44421682_+SINEAluAluSq2
CAediting_1429831chr20_44421699_+SINEAluAluSq2
CAediting_1429832chr20_44421704_+SINEAluAluSq2
CAediting_1429833chr20_44421709_+SINEAluAluSq2
CAediting_1429834chr20_44422044_+SINEMIRMIR
CAediting_1429835chr20_44422080_+SINEMIRMIR
CAediting_1429836chr20_44422741_+SINEAluAluSz
CAediting_1429837chr20_44422754_+SINEAluAluSz
CAediting_1429838chr20_44422766_+SINEAluAluSz
CAediting_1429839chr20_44422773_+SINEAluAluSz
CAediting_1429840chr20_44422779_+SINEAluAluSz
CAediting_1429841chr20_44422780_+SINEAluAluSz
CAediting_1429842chr20_44422792_+SINEAluAluSz
CAediting_1429843chr20_44422797_+SINEAluAluSz
CAediting_1429844chr20_44422818_+SINEAluAluSz
CAediting_1429845chr20_44422820_+SINEAluAluSz
CAediting_1429846chr20_44422824_+SINEAluAluSz
CAediting_1429847chr20_44422834_+SINEAluAluSz
CAediting_1429848chr20_44422844_+SINEAluAluSz
CAediting_1429849chr20_44422853_+SINEAluAluSz
CAediting_1429850chr20_44422859_+SINEAluAluSz
CAediting_1429851chr20_44422862_+SINEAluAluSz
CAediting_1429852chr20_44422864_+SINEAluAluSz
CAediting_1429853chr20_44422876_+SINEAluAluSz
CAediting_1429854chr20_44422881_+SINEAluAluSz
CAediting_1429855chr20_44422888_+SINEAluAluSz
CAediting_1429856chr20_44422899_+SINEAluAluSz
CAediting_1429857chr20_44422900_+SINEAluAluSz
CAediting_1429858chr20_44422901_+SINEAluAluSz
CAediting_1429859chr20_44422908_+SINEAluAluSz
CAediting_1429860chr20_44422913_+SINEAluAluSz
CAediting_1429861chr20_44422914_+SINEAluAluSz
CAediting_1429862chr20_44422953_+SINEAluAluSz
CAediting_1429863chr20_44422959_+SINEAluAluSz
CAediting_1429864chr20_44423068_+SINEAluAluSz
CAediting_1429865chr20_44423084_+SINEAluAluSz
CAediting_1429866chr20_44423092_+SINEAluAluSz
CAediting_1429867chr20_44423102_+SINEAluAluSz
CAediting_1429868chr20_44423107_+SINEAluAluSz
CAediting_1429869chr20_44423109_+SINEAluAluSz
CAediting_1429870chr20_44423110_+SINEAluAluSz
CAediting_1429871chr20_44423121_+SINEAluAluSz
CAediting_1429872chr20_44423127_+SINEAluAluSz
CAediting_1429873chr20_44423130_+SINEAluAluSz
CAediting_1429874chr20_44423155_+SINEAluAluSz
CAediting_1429875chr20_44423160_+SINEAluAluSz
CAediting_1429876chr20_44423163_+SINEAluAluSz
CAediting_1429877chr20_44423169_+SINEAluAluSz
CAediting_1429878chr20_44423196_+SINEAluAluSz
CAediting_1429879chr20_44423222_+SINEAluAluSz
CAediting_1429880chr20_44423228_+SINEAluAluSz
CAediting_1429881chr20_44423236_+SINEAluAluSz
CAediting_1429882chr20_44423271_+SINEAluAluSz
CAediting_1429883chr20_44425005_+SINEAluAluSx1
CAediting_1429884chr20_44425006_+SINEAluAluSx1
CAediting_1429885chr20_44425045_+SINEAluAluSx1
CAediting_1429886chr20_44425046_+SINEAluAluSx1
CAediting_1429887chr20_44425156_+SINEAluAluSx1
CAediting_1429888chr20_44425168_+SINEAluAluSx1
CAediting_1429889chr20_44425181_+SINEAluAluSx1
CAediting_1429890chr20_44425193_+SINEAluAluSx1
CAediting_1429891chr20_44425194_+SINEAluAluSx1
CAediting_1429892chr20_44425204_+SINEAluAluSx1
CAediting_1429893chr20_44425218_+SINEAluAluSx1
CAediting_1429894chr20_44425219_+SINEAluAluSx1
CAediting_1429895chr20_44425226_+SINEAluAluSx1
CAediting_1429896chr20_44425230_+SINEAluAluSx1
CAediting_1429897chr20_44425244_+SINEAluAluSx1
CAediting_1429898chr20_44425245_+SINEAluAluSx1
CAediting_1429899chr20_44425676_+SINEAluAluJr
CAediting_1429900chr20_44425694_+SINEAluAluJr
CAediting_1429901chr20_44425748_+SINEAluAluJr
CAediting_1429902chr20_44425754_+SINEAluAluJr
CAediting_1429903chr20_44425755_+SINEAluAluJr
CAediting_1429904chr20_44425757_+SINEAluAluJr
CAediting_1429905chr20_44425767_+SINEAluAluJr
CAediting_1429906chr20_44425772_+SINEAluAluJr
CAediting_1429907chr20_44425780_+SINEAluAluJr
CAediting_1429908chr20_44425781_+SINEAluAluJr
CAediting_1429909chr20_44425784_+SINEAluAluJr
CAediting_1429910chr20_44425794_+SINEAluAluJr
CAediting_1429911chr20_44425816_+SINEAluAluJr
CAediting_1429912chr20_44425857_+SINEAluAluJr
CAediting_1429913chr20_44425869_+SINEAluAluJr
CAediting_1429914chr20_44425882_+SINEAluAluJr
CAediting_1429915chr20_44425888_+SINEAluAluJr
CAediting_1429916chr20_44425895_+SINEAluAluJr
CAediting_1429917chr20_44425898_+SINEAluAluJr
CAediting_1429918chr20_44425899_+SINEAluAluJr
CAediting_1429919chr20_44425920_+SINEAluAluJr
CAediting_1429920chr20_44425921_+SINEAluAluJr
CAediting_1429921chr20_44425922_+SINEAluAluJr
CAediting_1429922chr20_44425934_+SINEAluAluJr
CAediting_1429923chr20_44425943_+SINEAluAluJr
CAediting_1429924chr20_44426540_+SINEAluAluSz6
CAediting_1429925chr20_44426542_+SINEAluAluSz6
CAediting_1429926chr20_44426548_+SINEAluAluSz6
CAediting_1429927chr20_44426549_+SINEAluAluSz6
CAediting_1429928chr20_44426571_+SINEAluAluSz6
CAediting_1429929chr20_44426584_+SINEAluAluSz6
CAediting_1429930chr20_44426589_+SINEAluAluSz6
CAediting_1429931chr20_44426594_+SINEAluAluSz6
CAediting_1429932chr20_44426602_+SINEAluAluSz6
CAediting_1429933chr20_44426603_+SINEAluAluSz6
CAediting_1429934chr20_44426617_+SINEAluAluSz6
CAediting_1429935chr20_44426621_+SINEAluAluSz6
CAediting_1429936chr20_44426624_+SINEAluAluSz6
CAediting_1429937chr20_44426626_+SINEAluAluSz6
CAediting_1429938chr20_44426627_+SINEAluAluSz6
CAediting_1429939chr20_44426650_+SINEAluAluSz6
CAediting_1429940chr20_44426657_+SINEAluAluSz6
CAediting_1429941chr20_44426660_+SINEAluAluSz6
CAediting_1429942chr20_44426664_+SINEAluAluSz6
CAediting_1429943chr20_44426676_+SINEAluAluSz6
CAediting_1429944chr20_44426680_+SINEAluAluSz6
CAediting_1429945chr20_44426686_+SINEAluAluSz6
CAediting_1429946chr20_44426687_+SINEAluAluSz6
CAediting_1429947chr20_44426692_+SINEAluAluSz6
CAediting_1429948chr20_44426696_+SINEAluAluSz6
CAediting_1429949chr20_44426709_+SINEAluAluSz6
CAediting_1429950chr20_44426713_+SINEAluAluSz6
CAediting_1429951chr20_44426722_+SINEAluAluSz6
CAediting_1429952chr20_44426728_+SINEAluAluSz6
CAediting_1429953chr20_44426747_+SINEAluAluSz6
CAediting_1429954chr20_44426748_+SINEAluAluSz6
CAediting_1429955chr20_44426752_+SINEAluAluSz6
CAediting_1429956chr20_44426757_+SINEAluAluSz6
CAediting_1429957chr20_44426759_+SINEAluAluSz6
CAediting_1429958chr20_44426762_+SINEAluAluSz6
CAediting_1429959chr20_44426791_+SINEAluAluSz6

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RNA A-to-I editing events in the alternative splicing sites for HNF4A

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeCAeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength
ESCAediting_1429834chr20_44422044_+44422027:444220493SS0+3iATTATTATCTCCATTTTACAGAT-8.11ATTATTATCTCCATTTTGCAGAT-12

check button Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000101076.15.HNF4A.

check button Correlation between RNA A-to-I editing and PSI for ENSG00000101076.15.HNF4A.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for HNF4A

check button Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.
boxplot

check button Correlation between RNA A-to-I editing and gene expression.
boxplot

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for HNF4A

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.


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The effects of the RNA editing to the miRNA binding sites for HNF4A

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_393chr1_1167164_+ENSG00000101076.15ENST00000316099hsa-miR-200b-3p44434026444340327mer-m84443401444434033147-12.87
CAediting_748296chr10_51299626_+ENSG00000101076.15ENST00000372920hsa-miR-605-3p44413753444137597mer-m84441373944413760141-15.12
CAediting_748296chr10_51299626_+ENSG00000101076.15ENST00000443598hsa-miR-605-3p44424510444245167mer-m84442450044424517146-17.76
CAediting_1229414chr17_67471546_+ENSG00000101076.15ENST00000619550hsa-miR-548aa44432716444327216mer4443269944432722145-17.65
CAediting_1229415chr17_67471547_+ENSG00000101076.15ENST00000619550hsa-miR-548aa44431640444316467mer-m84443162444431647160-14.29
CAediting_1306323chr19_13836462_-ENSG00000101076.15ENST00000619550hsa-miR-27a-3p44431223444312297mer-m84443121044431230146-15.64
CAediting_1368054chr19_46709310_-ENSG00000101076.15ENST00000619550hsa-miR-320e44430010444300167mer-m84442999944430017159-22.23
CAediting_77128chr1_85133844_+ENSG00000101076.15ENST00000619550hsa-miR-4423-3p44431798444318047mer-m84443178544431805140-14.66
CAediting_442554chr5_154685830_+ENSG00000101076.15ENST00000619550hsa-miR-130344431199444312068mer-1a4443118544431206148-13.5
CAediting_442554chr5_154685830_+ENSG00000101076.15ENST00000619550hsa-miR-130344430189444301957mer-m84443017444430196155-21.09
CAediting_442554chr5_154685830_+ENSG00000101076.15ENST00000619550hsa-miR-130344430189444301957mer-m84443018944430210150-21.37
CAediting_524911chr7_5495852_-ENSG00000101076.15ENST00000619550hsa-miR-589-3p44429848444298547mer-m84442983244429855140-14.26
CAediting_1229414chr17_67471546_+ENSG00000101076.15ENST00000316099hsa-miR-548aa44432716444327216mer4443269944432722145-17.65
CAediting_1229415chr17_67471547_+ENSG00000101076.15ENST00000316099hsa-miR-548aa44431640444316467mer-m84443162444431647160-14.29
CAediting_1306323chr19_13836462_-ENSG00000101076.15ENST00000316099hsa-miR-27a-3p44431223444312297mer-m84443121044431230146-15.64
CAediting_1368054chr19_46709310_-ENSG00000101076.15ENST00000316099hsa-miR-320e44430010444300167mer-m84442999944430017159-22.23
CAediting_77128chr1_85133844_+ENSG00000101076.15ENST00000316099hsa-miR-4423-3p44431798444318047mer-m84443178544431805140-14.66
CAediting_228905chr2_188297554_+ENSG00000101076.15ENST00000316099hsa-miR-561-3p44433963444339708mer-1a4443394844433970157-17.07
CAediting_228905chr2_188297554_+ENSG00000101076.15ENST00000316099hsa-miR-561-3p44434357444343637mer-m84443434544434364152-8.84
CAediting_442554chr5_154685830_+ENSG00000101076.15ENST00000316099hsa-miR-130344431199444312068mer-1a4443118544431206148-13.5
CAediting_442554chr5_154685830_+ENSG00000101076.15ENST00000316099hsa-miR-130344433762444337687mer-m84443374944433769152-20.81
CAediting_442554chr5_154685830_+ENSG00000101076.15ENST00000316099hsa-miR-130344430189444301957mer-m84443017444430196155-21.09
CAediting_442554chr5_154685830_+ENSG00000101076.15ENST00000316099hsa-miR-130344430189444301957mer-m84443018944430210150-21.37
CAediting_524911chr7_5495852_-ENSG00000101076.15ENST00000316099hsa-miR-589-3p44429848444298547mer-m84442983244429855140-14.26
CAediting_414656chr5_72878640_+ENSG00000101076.15ENST00000372920hsa-miR-4804-3p44413730444137367mer-m84441371744413737155-17.84
CAediting_414656chr5_72878640_+ENSG00000101076.15ENST00000372920hsa-miR-4804-3p44424047444240526mer4442403444424053141-20.95
CAediting_86358chr1_109598906_+ENSG00000101076.15ENST00000372920hsa-miR-197-5p44428362444283676mer4442835544428377144-29.52
CAediting_1306323chr19_13836462_-ENSG00000101076.15ENST00000372920hsa-miR-27a-3p44431223444312297mer-m84443121044431230146-15.64
CAediting_1368054chr19_46709310_-ENSG00000101076.15ENST00000372920hsa-miR-320e44430010444300167mer-m84442999944430017159-22.23
CAediting_442554chr5_154685830_+ENSG00000101076.15ENST00000372920hsa-miR-130344431199444312068mer-1a4443118544431206148-13.5
CAediting_442554chr5_154685830_+ENSG00000101076.15ENST00000372920hsa-miR-130344430189444301957mer-m84443017444430196155-21.09
CAediting_442554chr5_154685830_+ENSG00000101076.15ENST00000372920hsa-miR-130344430189444301957mer-m84443018944430210150-21.37
CAediting_414656chr5_72878640_+ENSG00000101076.15ENST00000372920hsa-miR-4804-3p44429608444296147mer-m84442959444429615143-12.87
CAediting_524911chr7_5495852_-ENSG00000101076.15ENST00000372920hsa-miR-589-3p44429848444298547mer-m84442983244429855140-14.26
CAediting_1368054chr19_46709310_-ENSG00000101076.15ENST00000415691hsa-miR-320e44430010444300167mer-m84442999944430017159-22.23
CAediting_442554chr5_154685830_+ENSG00000101076.15ENST00000415691hsa-miR-130344430189444301957mer-m84443017444430196155-21.09
CAediting_442554chr5_154685830_+ENSG00000101076.15ENST00000415691hsa-miR-130344430189444301957mer-m84443018944430210150-21.37
CAediting_524911chr7_5495852_-ENSG00000101076.15ENST00000415691hsa-miR-589-3p44429848444298547mer-m84442983244429855140-14.26
CAediting_468389chr6_31355314_-ENSG00000101076.15ENST00000619550hsa-miR-6891-5p44430040444300456mer4443002844430046145-24
CAediting_468389chr6_31355314_-ENSG00000101076.15ENST00000316099hsa-miR-6891-5p44430040444300456mer4443002844430046145-24
CAediting_1524209chrX_134546392_-ENSG00000101076.15ENST00000316099hsa-miR-503-5p44434494444344996mer4443447744434500152-29.03
CAediting_468389chr6_31355314_-ENSG00000101076.15ENST00000372920hsa-miR-6891-5p44430040444300456mer4443002844430046145-24
CAediting_468389chr6_31355314_-ENSG00000101076.15ENST00000415691hsa-miR-6891-5p44430040444300456mer4443002844430046145-24

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_573001chr7_92204086_-ENSG00000101076.15ENST00000619550hsa-miR-1285-5p44430529444305357mer-m84443051644430536155-20.22
CAediting_86358chr1_109598906_+ENSG00000101076.15ENST00000619550hsa-miR-197-5p44432220444322267mer-m84443220344432227143-22.01
CAediting_396018chr5_1062918_-ENSG00000101076.15ENST00000619550hsa-miR-463544430689444306957mer-m84443067244430696151-19.93
CAediting_748296chr10_51299626_+ENSG00000101076.15ENST00000619550hsa-miR-605-3p44429921444299288mer-1a4442991044429928143-12.17
CAediting_1351755chr19_40282625_-ENSG00000101076.15ENST00000619550hsa-miR-64144432111444321166mer4443209444432117141-16.59
CAediting_573001chr7_92204086_-ENSG00000101076.15ENST00000316099hsa-miR-1285-5p44430529444305357mer-m84443051644430536155-20.22
CAediting_86358chr1_109598906_+ENSG00000101076.15ENST00000316099hsa-miR-197-5p44432220444322267mer-m84443220344432227143-22.01
CAediting_1306323chr19_13836462_-ENSG00000101076.15ENST00000316099hsa-miR-27a-3p44434281444342877mer-m84443426844434288154-14.8
CAediting_77128chr1_85133844_+ENSG00000101076.15ENST00000316099hsa-miR-4423-3p44433551444335577mer-m84443353744433558141-14.54
CAediting_688080chr9_63819626_+ENSG00000101076.15ENST00000316099hsa-miR-4477b44434118444341247mer-m84443410544434125147-10.86
CAediting_688081chr9_63819627_+ENSG00000101076.15ENST00000316099hsa-miR-4477b44434118444341247mer-m84443410544434125147-10.86
CAediting_396018chr5_1062918_-ENSG00000101076.15ENST00000316099hsa-miR-463544430689444306957mer-m84443067244430696151-19.93
CAediting_748296chr10_51299626_+ENSG00000101076.15ENST00000316099hsa-miR-605-3p44429921444299288mer-1a4442991044429928143-12.17
CAediting_748296chr10_51299626_+ENSG00000101076.15ENST00000316099hsa-miR-605-3p44434416444344216mer4443441444434434150-14.14
CAediting_748296chr10_51299626_+ENSG00000101076.15ENST00000316099hsa-miR-605-3p44434427444344337mer-m84443441444434434150-14.14
CAediting_1351755chr19_40282625_-ENSG00000101076.15ENST00000316099hsa-miR-64144432111444321166mer4443209444432117141-16.59
CAediting_468389chr6_31355314_-ENSG00000101076.15ENST00000316099hsa-miR-6891-5p44434074444340807mer-m84443406344434081143-16.39
CAediting_396018chr5_1062918_-ENSG00000101076.15ENST00000372920hsa-miR-463544430689444306957mer-m84443067244430696151-19.93
CAediting_748296chr10_51299626_+ENSG00000101076.15ENST00000372920hsa-miR-605-3p44429921444299288mer-1a4442991044429928143-12.17
CAediting_117844chr1_162342605_+ENSG00000101076.15ENST00000443598hsa-miR-556-3p44424629444246357mer-m84442461344424636148-9.54

check button Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for HNF4A

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.

check button RNA A-to-I editing in RNA structures for Minimum free energy (MFE).
CAeditom_IDENSTEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI

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Relation with ADAR for HNF4A

check button Correlation between ADAR gene expression and RNA editing frequency
CancerCAeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)
LIHCCAediting_1429917chr20_44425898_+0.03842888846171440.282567627096493....
LIHCCAediting_1429952chr20_44426728_+0.0298079765252670.200963739199757....
LIHCCAediting_1429958chr20_44426762_+2.07980207929696e-070.393198385806221....

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Relation with cancer stages for HNF4A

check button Correlation between Cancer stages and RNA editing frequency
CancerStage_typeCAeditomIDpositionP-valCoeff.
KIRCpathologic_stageCAediting_1429952chr20_44426728_+0.0153836273178371-0.249311609856942

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Relation with survival for HNF4A

check button Correlation between RNA editing and survival
CancerCAeditomIDpositionKMpvalueCoxpvalueCoxHR
LIHCCAediting_1429958chr20_44426762_+0.01163638697210280.0019451328.0121

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RelatedDrugs for HNF4A

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status
HNF4AP41235DB03017Lauric acidHepatocyte nuclear factor 4-alpha SmallMoleculeDrugapproved|experimental

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RelatedDiseases for HNF4A

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease name# pubmedsSource
HNF4AC1852093Maturity-Onset Diabetes of the Young, Type 18CTD_human;GENOMICS_ENGLAND;UNIPROT
HNF4AC3888631Monogenic diabetes7CLINGEN;GENOMICS_ENGLAND
HNF4AC0011860Diabetes Mellitus, Non-Insulin-Dependent5CTD_human;GENOMICS_ENGLAND;UNIPROT
HNF4AC4014962FANCONI RENOTUBULAR SYNDROME 4 WITH MATURITY-ONSET DIABETES OF THE YOUNG5CTD_human;GENOMICS_ENGLAND;UNIPROT
HNF4AC0342276Maturity onset diabetes mellitus in young2GENOMICS_ENGLAND;ORPHANET
HNF4AC4274078Hyperinsulinism due to HNF4A deficiency2ORPHANET
HNF4AC0009324Ulcerative Colitis1CTD_human
HNF4AC0431693Renal cysts and diabetes syndrome1ORPHANET