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Editing gene: HIVEP1 (CAeditome ID:3096)

Gene summary for HIVEP1

Gene summary

Gene information	Gene symbol	HIVEP1
	Gene ID	3096
	Gene name	HIVEP zinc finger 1
	Synonyms	CIRIP\|CRYBP1\|GAAP\|MBP-1\|PRDII-BF1\|Schnurri-1\|ZAS1\|ZNF40\|ZNF40A
	Cytomap	6p24.1
	Type of gene	protein-coding
	Description	zinc finger protein 40cirhin interaction proteingate keeper of apoptosis-activating proteinhuman immunodeficiency virus type I enhancer binding protein 1major histocompatibility complex binding protein 1positive regulatory domain II binding factor 1
	Modification date	20210518
	UniProtAcc	P15822
	Context	- 23975832(Downregulation of tumor suppressor MBP-1 by microRNA-363 in gastric carcinogenesis)

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene	GO ID	GO term	PubMed ID
HIVEP1	GO:1990837	Zinc finger protein 40	2106471
HIVEP1	GO:0000122	Zinc finger protein 40	17008448
HIVEP1	GO:0030509	Zinc finger protein 40	17008448
HIVEP1	GO:0045944	Zinc finger protein 40	17008448
HIVEP1	GO:0005634	Zinc finger protein 40	19732766
HIVEP1	GO:0005654	Zinc finger protein 40	0000052
HIVEP1	GO:0005739	Zinc finger protein 40	0000052
HIVEP1	GO:0005829	Zinc finger protein 40	0000052
HIVEP1	GO:0016604	Zinc finger protein 40	0000052

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RNA A-to-I events for HIVEP1

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000095951.15

RNA A-to-I editing events in Cancer.

CAediting_459174(12021783, +), CAediting_459175(12025854, +), CAediting_459176(12025920, +), CAediting_459177(12025941, +), CAediting_459178(12025942, +), CAediting_459179(12025960, +), CAediting_459180(12025969, +), CAediting_459181(12025972, +), CAediting_459182(12025990, +), CAediting_459183(12025997, +), CAediting_459184(12037770, +), CAediting_459185(12037840, +), CAediting_459186(12037850, +), CAediting_459187(12037852, +), CAediting_459188(12037856, +), CAediting_459189(12037949, +), CAediting_459190(12037975, +), CAediting_459191(12037977, +), CAediting_459192(12037980, +), CAediting_459193(12037984, +), CAediting_459194(12037989, +), CAediting_459195(12037991, +), CAediting_459196(12038007, +), CAediting_459197(12038418, +), CAediting_459198(12038419, +), CAediting_459199(12038427, +), CAediting_459200(12038457, +), CAediting_459201(12038525, +), CAediting_459202(12038545, +), CAediting_459203(12038613, +), CAediting_459204(12038617, +), CAediting_459205(12038621, +), CAediting_459206(12041158, +), CAediting_459207(12041167, +), CAediting_459208(12041210, +), CAediting_459209(12041213, +), CAediting_459210(12041233, +), CAediting_459211(12041234, +), CAediting_459212(12041258, +), CAediting_459213(12041259, +), CAediting_459214(12041260, +), CAediting_459215(12041261, +), CAediting_459216(12041275, +), CAediting_459217(12041301, +), CAediting_459218(12041307, +), CAediting_459219(12041311, +), CAediting_459220(12041328, +), CAediting_459221(12041334, +), CAediting_459222(12041342, +), CAediting_459223(12041757, +), CAediting_459224(12041763, +), CAediting_459225(12041764, +), CAediting_459226(12041768, +), CAediting_459227(12041789, +), CAediting_459228(12041799, +), CAediting_459229(12041800, +), CAediting_459230(12041801, +), CAediting_459231(12041825, +), CAediting_459232(12041826, +), CAediting_459233(12041844, +), CAediting_459234(12041866, +), CAediting_459235(12046674, +), CAediting_459236(12046964, +), CAediting_459237(12046965, +), CAediting_459238(12057932, +), CAediting_459239(12057939, +), CAediting_459240(12057946, +), CAediting_459241(12057960, +), CAediting_459242(12057968, +), CAediting_459243(12059221, +), CAediting_459244(12062582, +), CAediting_459245(12062589, +), CAediting_459246(12154709, +), CAediting_459247(12155277, +), CAediting_459248(12155317, +), CAediting_459249(12155318, +),

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RNA editing positional annotations for HIVEP1 using Annovar

Protein coding RNA editing(s).

CAeditome ID	Position	Variant type	ENST	NTchange	AAchange	SIFT_score	Polyphen2_HVAR_score	PROVEAN_pred
CAediting_459184	chr6_12037770_+	nonsynonymous SNV	ENST00000484210.1	c.A85G	p.S29G	.	.	D

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_459174	chr6_12021783_+	intronic
CAediting_459175	chr6_12025854_+	intronic
CAediting_459176	chr6_12025920_+	intronic
CAediting_459177	chr6_12025941_+	intronic
CAediting_459178	chr6_12025942_+	intronic
CAediting_459179	chr6_12025960_+	intronic
CAediting_459180	chr6_12025969_+	intronic
CAediting_459181	chr6_12025972_+	intronic
CAediting_459182	chr6_12025990_+	intronic
CAediting_459183	chr6_12025997_+	intronic
CAediting_459184	chr6_12037770_+	exonic
CAediting_459185	chr6_12037840_+	UTR3
CAediting_459186	chr6_12037850_+	UTR3
CAediting_459187	chr6_12037852_+	UTR3
CAediting_459188	chr6_12037856_+	UTR3
CAediting_459189	chr6_12037949_+	UTR3
CAediting_459190	chr6_12037975_+	UTR3
CAediting_459191	chr6_12037977_+	UTR3
CAediting_459192	chr6_12037980_+	UTR3
CAediting_459193	chr6_12037984_+	UTR3
CAediting_459194	chr6_12037989_+	UTR3
CAediting_459195	chr6_12037991_+	UTR3
CAediting_459196	chr6_12038007_+	UTR3
CAediting_459197	chr6_12038418_+	UTR3
CAediting_459198	chr6_12038419_+	UTR3
CAediting_459199	chr6_12038427_+	UTR3
CAediting_459200	chr6_12038457_+	UTR3
CAediting_459201	chr6_12038525_+	UTR3
CAediting_459202	chr6_12038545_+	UTR3
CAediting_459203	chr6_12038613_+	UTR3
CAediting_459204	chr6_12038617_+	UTR3
CAediting_459205	chr6_12038621_+	UTR3
CAediting_459206	chr6_12041158_+	intronic
CAediting_459207	chr6_12041167_+	intronic
CAediting_459208	chr6_12041210_+	intronic
CAediting_459209	chr6_12041213_+	intronic
CAediting_459210	chr6_12041233_+	intronic
CAediting_459211	chr6_12041234_+	intronic
CAediting_459212	chr6_12041258_+	intronic
CAediting_459213	chr6_12041259_+	intronic
CAediting_459214	chr6_12041260_+	intronic
CAediting_459215	chr6_12041261_+	intronic
CAediting_459216	chr6_12041275_+	intronic
CAediting_459217	chr6_12041301_+	intronic
CAediting_459218	chr6_12041307_+	intronic
CAediting_459219	chr6_12041311_+	intronic
CAediting_459220	chr6_12041328_+	intronic
CAediting_459221	chr6_12041334_+	intronic
CAediting_459222	chr6_12041342_+	intronic
CAediting_459223	chr6_12041757_+	intronic
CAediting_459224	chr6_12041763_+	intronic
CAediting_459225	chr6_12041764_+	intronic
CAediting_459226	chr6_12041768_+	intronic
CAediting_459227	chr6_12041789_+	intronic
CAediting_459228	chr6_12041799_+	intronic
CAediting_459229	chr6_12041800_+	intronic
CAediting_459230	chr6_12041801_+	intronic
CAediting_459231	chr6_12041825_+	intronic
CAediting_459232	chr6_12041826_+	intronic
CAediting_459233	chr6_12041844_+	intronic
CAediting_459234	chr6_12041866_+	intronic
CAediting_459235	chr6_12046674_+	intronic
CAediting_459236	chr6_12046964_+	intronic
CAediting_459237	chr6_12046965_+	intronic
CAediting_459238	chr6_12057932_+	intronic
CAediting_459239	chr6_12057939_+	intronic
CAediting_459240	chr6_12057946_+	intronic
CAediting_459241	chr6_12057960_+	intronic
CAediting_459242	chr6_12057968_+	intronic
CAediting_459243	chr6_12059221_+	intronic
CAediting_459244	chr6_12062582_+	intronic
CAediting_459245	chr6_12062589_+	intronic
CAediting_459246	chr6_12154709_+	intronic
CAediting_459247	chr6_12155277_+	intronic
CAediting_459248	chr6_12155317_+	intronic
CAediting_459249	chr6_12155318_+	intronic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_459174	chr6_12021783_+	SINE	Alu	AluSq
CAediting_459175	chr6_12025854_+	SINE	Alu	AluSq2
CAediting_459176	chr6_12025920_+	SINE	Alu	AluSq2
CAediting_459177	chr6_12025941_+	SINE	Alu	AluSq2
CAediting_459178	chr6_12025942_+	SINE	Alu	AluSq2
CAediting_459179	chr6_12025960_+	SINE	Alu	AluSq2
CAediting_459180	chr6_12025969_+	SINE	Alu	AluSq2
CAediting_459181	chr6_12025972_+	SINE	Alu	AluSq2
CAediting_459182	chr6_12025990_+	SINE	Alu	AluSq2
CAediting_459183	chr6_12025997_+	SINE	Alu	AluSq2
CAediting_459184	chr6_12037770_+	SINE	Alu	AluJr4
CAediting_459185	chr6_12037840_+	SINE	Alu	AluJr4
CAediting_459186	chr6_12037850_+	SINE	Alu	AluJr4
CAediting_459187	chr6_12037852_+	SINE	Alu	AluJr4
CAediting_459188	chr6_12037856_+	SINE	Alu	AluJr4
CAediting_459189	chr6_12037949_+	SINE	Alu	AluJr4
CAediting_459190	chr6_12037975_+	SINE	Alu	AluJr4
CAediting_459191	chr6_12037977_+	SINE	Alu	AluJr4
CAediting_459192	chr6_12037980_+	SINE	Alu	AluJr4
CAediting_459193	chr6_12037984_+	SINE	Alu	AluJr4
CAediting_459194	chr6_12037989_+	SINE	Alu	AluJr4
CAediting_459195	chr6_12037991_+	SINE	Alu	AluJr4
CAediting_459196	chr6_12038007_+	SINE	Alu	AluJr4
CAediting_459197	chr6_12038418_+	SINE	Alu	AluSc
CAediting_459198	chr6_12038419_+	SINE	Alu	AluSc
CAediting_459199	chr6_12038427_+	SINE	Alu	AluSc
CAediting_459200	chr6_12038457_+	SINE	Alu	AluSc
CAediting_459201	chr6_12038525_+	SINE	Alu	AluSc
CAediting_459202	chr6_12038545_+	SINE	Alu	AluSc
CAediting_459203	chr6_12038613_+	SINE	Alu	AluSc
CAediting_459204	chr6_12038617_+	SINE	Alu	AluSc
CAediting_459205	chr6_12038621_+	SINE	Alu	AluSc
CAediting_459206	chr6_12041158_+	SINE	Alu	AluY
CAediting_459207	chr6_12041167_+	SINE	Alu	AluY
CAediting_459208	chr6_12041210_+	SINE	Alu	AluY
CAediting_459209	chr6_12041213_+	SINE	Alu	AluY
CAediting_459210	chr6_12041233_+	SINE	Alu	AluY
CAediting_459211	chr6_12041234_+	SINE	Alu	AluY
CAediting_459212	chr6_12041258_+	SINE	Alu	AluY
CAediting_459213	chr6_12041259_+	SINE	Alu	AluY
CAediting_459214	chr6_12041260_+	SINE	Alu	AluY
CAediting_459215	chr6_12041261_+	SINE	Alu	AluY
CAediting_459216	chr6_12041275_+	SINE	Alu	AluY
CAediting_459217	chr6_12041301_+	SINE	Alu	AluY
CAediting_459218	chr6_12041307_+	SINE	Alu	AluY
CAediting_459219	chr6_12041311_+	SINE	Alu	AluY
CAediting_459220	chr6_12041328_+	SINE	Alu	AluY
CAediting_459221	chr6_12041334_+	SINE	Alu	AluY
CAediting_459222	chr6_12041342_+	SINE	Alu	AluY
CAediting_459223	chr6_12041757_+	SINE	Alu	AluSc8
CAediting_459224	chr6_12041763_+	SINE	Alu	AluSc8
CAediting_459225	chr6_12041764_+	SINE	Alu	AluSc8
CAediting_459226	chr6_12041768_+	SINE	Alu	AluSc8
CAediting_459227	chr6_12041789_+	SINE	Alu	AluSc8
CAediting_459228	chr6_12041799_+	SINE	Alu	AluSc8
CAediting_459229	chr6_12041800_+	SINE	Alu	AluSc8
CAediting_459230	chr6_12041801_+	SINE	Alu	AluSc8
CAediting_459231	chr6_12041825_+	SINE	Alu	AluSc8
CAediting_459232	chr6_12041826_+	SINE	Alu	AluSc8
CAediting_459233	chr6_12041844_+	SINE	Alu	AluSc8
CAediting_459234	chr6_12041866_+	SINE	Alu	AluSc8
CAediting_459235	chr6_12046674_+	SINE	Alu	AluSc
CAediting_459236	chr6_12046964_+	SINE	Alu	AluSg
CAediting_459237	chr6_12046965_+	SINE	Alu	AluSg
CAediting_459238	chr6_12057932_+	SINE	MIR	MIR
CAediting_459239	chr6_12057939_+	SINE	MIR	MIR
CAediting_459240	chr6_12057946_+	SINE	MIR	MIR
CAediting_459243	chr6_12059221_+	SINE	Alu	AluSx
CAediting_459245	chr6_12062589_+	SINE	MIR	MIR
CAediting_459246	chr6_12154709_+	LINE	L1	L1PA8
CAediting_459247	chr6_12155277_+	LINE	L1	L1PA11
CAediting_459248	chr6_12155317_+	LINE	L1	L1PA11
CAediting_459249	chr6_12155318_+	LINE	L1	L1PA11

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RNA A-to-I editing events in the alternative splicing sites for HIVEP1

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000095951.15.HIVEP1.

Correlation between RNA A-to-I editing and PSI for ENSG00000095951.15.HIVEP1.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for HIVEP1

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for HIVEP1

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for HIVEP1

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_459191	chr6_12037977_+	ENSG00000095951.15	ENST00000484210	hsa-miR-3189-3p	12037971	12037977	7mer-m8	12037956	12037978	141.00	-18.50
CAediting_459191	chr6_12037977_+	ENSG00000095951.15	ENST00000484210	hsa-miR-33b-3p	12037975	12037981	7mer-m8	12037961	12037982	156.00	-21.35
CAediting_459191	chr6_12037977_+	ENSG00000095951.15	ENST00000484210	hsa-miR-515-3p	12037975	12037981	7mer-m8	12037961	12037982	145.00	-14.92
CAediting_459191	chr6_12037977_+	ENSG00000095951.15	ENST00000484210	hsa-miR-515-3p	12037975	12037981	7mer-m8	12037961	12037982	145.00	-14.92
CAediting_459191	chr6_12037977_+	ENSG00000095951.15	ENST00000484210	hsa-miR-519e-3p	12037975	12037981	7mer-m8	12037961	12037982	140.00	-10.76
CAediting_459205	chr6_12038621_+	ENSG00000095951.15	ENST00000484210	hsa-miR-4638-5p	12038616	12038623	8mer-1a	12038604	12038623	146.00	-20.28
CAediting_459186	chr6_12037850_+	ENSG00000095951.15	ENST00000484210	hsa-miR-17-3p	12037846	12037852	7mer-m8	12037832	12037853	154.00	-17.32
CAediting_459186	chr6_12037850_+	ENSG00000095951.15	ENST00000484210	hsa-miR-455-3p	12037843	12037849	7mer-m8	12037833	12037850	146.00	-16.64
CAediting_459188	chr6_12037856_+	ENSG00000095951.15	ENST00000484210	hsa-miR-4787-3p	12037852	12037858	7mer-m8	12037836	12037859	140.00	-16.71
CAediting_459188	chr6_12037856_+	ENSG00000095951.15	ENST00000484210	hsa-miR-6720-3p	12037850	12037857	8mer-1a	12037836	12037857	147.00	-17.23
CAediting_459193	chr6_12037984_+	ENSG00000095951.15	ENST00000484210	hsa-miR-1825	12037977	12037983	7mer-m8	12037967	12037984	140.00	-14.31
CAediting_459197	chr6_12038418_+	ENSG00000095951.15	ENST00000484210	hsa-miR-638	12038417	12038423	7mer-1a	12038399	12038423	147.00	-28.14
CAediting_459199	chr6_12038427_+	ENSG00000095951.15	ENST00000484210	hsa-miR-518a-3p	12038424	12038430	7mer-m8	12038410	12038431	145.00	-11.65
CAediting_459199	chr6_12038427_+	ENSG00000095951.15	ENST00000484210	hsa-miR-518a-3p	12038424	12038430	7mer-m8	12038410	12038431	145.00	-11.65
CAediting_459199	chr6_12038427_+	ENSG00000095951.15	ENST00000484210	hsa-miR-518b	12038424	12038430	7mer-m8	12038410	12038431	145.00	-16.07
CAediting_459199	chr6_12038427_+	ENSG00000095951.15	ENST00000484210	hsa-miR-518c-3p	12038424	12038430	7mer-m8	12038410	12038431	147.00	-17.54
CAediting_459199	chr6_12038427_+	ENSG00000095951.15	ENST00000484210	hsa-miR-518d-3p	12038424	12038430	7mer-m8	12038411	12038431	145.00	-16.22
CAediting_459199	chr6_12038427_+	ENSG00000095951.15	ENST00000484210	hsa-miR-518e-3p	12038423	12038429	7mer-m8	12038410	12038430	140.00	-12.30
CAediting_459199	chr6_12038427_+	ENSG00000095951.15	ENST00000484210	hsa-miR-518f-3p	12038424	12038430	7mer-m8	12038411	12038431	145.00	-13.71
CAediting_459199	chr6_12038427_+	ENSG00000095951.15	ENST00000484210	hsa-miR-526a-3p	12038424	12038430	7mer-m8	12038410	12038431	145.00	-12.71
CAediting_459204	chr6_12038617_+	ENSG00000095951.15	ENST00000484210	hsa-miR-324-3p	12038610	12038616	7mer-m8	12038595	12038617	145.00	-25.24
CAediting_459203	chr6_12038613_+	ENSG00000095951.15	ENST00000484210	hsa-miR-6511a-3p	12038612	12038617	6mer	12038597	12038618	140.00	-25.44
CAediting_459203	chr6_12038613_+	ENSG00000095951.15	ENST00000484210	hsa-miR-6511a-3p	12038612	12038617	6mer	12038597	12038618	140.00	-25.44
CAediting_459203	chr6_12038613_+	ENSG00000095951.15	ENST00000484210	hsa-miR-6511a-3p	12038612	12038617	6mer	12038597	12038618	140.00	-25.44
CAediting_459203	chr6_12038613_+	ENSG00000095951.15	ENST00000484210	hsa-miR-6511a-3p	12038612	12038617	6mer	12038597	12038618	140.00	-25.44
CAediting_459203	chr6_12038613_+	ENSG00000095951.15	ENST00000484210	hsa-miR-6511b-3p	12038612	12038617	6mer	12038596	12038618	144.00	-28.15
CAediting_459203	chr6_12038613_+	ENSG00000095951.15	ENST00000484210	hsa-miR-6511b-3p	12038612	12038617	6mer	12038596	12038618	144.00	-28.15
CAediting_459203	chr6_12038613_+	ENSG00000095951.15	ENST00000484210	hsa-miR-6784-3p	12038612	12038617	6mer	12038596	12038618	147.00	-30.38

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_459188	chr6_12037856_+	ENSG00000095951.15	ENST00000484210	hsa-miR-10226	12037854	12037859	6mer	12037837	12037860	141	-21.15
CAediting_459199	chr6_12038427_+	ENSG00000095951.15	ENST00000484210	hsa-miR-106a-5p	12038424	12038430	7mer-m8	12038409	12038431	155	-14.56
CAediting_459187	chr6_12037852_+	ENSG00000095951.15	ENST00000484210	hsa-miR-1271-3p	12037850	12037857	8mer-1a	12037839	12037857	154	-23.83
CAediting_459188	chr6_12037856_+	ENSG00000095951.15	ENST00000484210	hsa-miR-1271-3p	12037850	12037857	8mer-1a	12037839	12037857	154	-23.83
CAediting_459189	chr6_12037949_+	ENSG00000095951.15	ENST00000484210	hsa-miR-1304-5p	12037943	12037949	7mer-m8	12037926	12037950	149	-18.76
CAediting_459199	chr6_12038427_+	ENSG00000095951.15	ENST00000484210	hsa-miR-17-5p	12038424	12038430	7mer-m8	12038409	12038431	155	-18.8
CAediting_459199	chr6_12038427_+	ENSG00000095951.15	ENST00000484210	hsa-miR-20a-5p	12038424	12038430	7mer-m8	12038409	12038431	155	-16.69
CAediting_459199	chr6_12038427_+	ENSG00000095951.15	ENST00000484210	hsa-miR-20b-5p	12038424	12038430	7mer-m8	12038409	12038431	155	-18.8
CAediting_459193	chr6_12037984_+	ENSG00000095951.15	ENST00000484210	hsa-miR-216a-5p	12037981	12037988	8mer-1a	12037968	12037988	146	-14.35
CAediting_459199	chr6_12038427_+	ENSG00000095951.15	ENST00000484210	hsa-miR-302a-3p	12038423	12038429	7mer-m8	12038408	12038430	141	-11.09
CAediting_459199	chr6_12038427_+	ENSG00000095951.15	ENST00000484210	hsa-miR-302b-3p	12038423	12038429	7mer-m8	12038410	12038430	142	-9.43
CAediting_459199	chr6_12038427_+	ENSG00000095951.15	ENST00000484210	hsa-miR-302c-3p	12038423	12038429	7mer-m8	12038410	12038430	146	-11.96
CAediting_459199	chr6_12038427_+	ENSG00000095951.15	ENST00000484210	hsa-miR-302d-3p	12038423	12038429	7mer-m8	12038408	12038430	141	-9.87
CAediting_459199	chr6_12038427_+	ENSG00000095951.15	ENST00000484210	hsa-miR-302e	12038423	12038429	7mer-m8	12038414	12038430	141	-8.62
CAediting_459199	chr6_12038427_+	ENSG00000095951.15	ENST00000484210	hsa-miR-373-3p	12038423	12038429	7mer-m8	12038408	12038430	154	-15.55
CAediting_459204	chr6_12038617_+	ENSG00000095951.15	ENST00000484210	hsa-miR-4284	12038613	12038620	8mer-1a	12038603	12038620	151	-18.62
CAediting_459196	chr6_12038007_+	ENSG00000095951.15	ENST00000484210	hsa-miR-4466	12038002	12038008	7mer-m8	12037992	12038009	140	-20.87
CAediting_459201	chr6_12038525_+	ENSG00000095951.15	ENST00000484210	hsa-miR-4735-5p	12038519	12038525	7mer-m8	12038505	12038526	140	-5.48
CAediting_459198	chr6_12038419_+	ENSG00000095951.15	ENST00000484210	hsa-miR-5089-5p	12038417	12038423	7mer-m8	12038402	12038424	144	-15.01
CAediting_459199	chr6_12038427_+	ENSG00000095951.15	ENST00000484210	hsa-miR-512-3p	12038422	12038428	7mer-m8	12038408	12038429	147	-14.61
CAediting_459199	chr6_12038427_+	ENSG00000095951.15	ENST00000484210	hsa-miR-512-3p	12038422	12038428	7mer-m8	12038408	12038429	147	-14.61
CAediting_459202	chr6_12038545_+	ENSG00000095951.15	ENST00000484210	hsa-miR-519a-3p	12038541	12038547	7mer-m8	12038527	12038548	152	-13.4
CAediting_459202	chr6_12038545_+	ENSG00000095951.15	ENST00000484210	hsa-miR-519a-3p	12038541	12038547	7mer-m8	12038527	12038548	152	-13.4
CAediting_459202	chr6_12038545_+	ENSG00000095951.15	ENST00000484210	hsa-miR-519b-3p	12038541	12038547	7mer-m8	12038527	12038548	152	-13.5
CAediting_459202	chr6_12038545_+	ENSG00000095951.15	ENST00000484210	hsa-miR-519c-3p	12038541	12038547	7mer-m8	12038527	12038548	148	-10.78
CAediting_459199	chr6_12038427_+	ENSG00000095951.15	ENST00000484210	hsa-miR-519d-3p	12038424	12038430	7mer-m8	12038411	12038431	142	-13.53
CAediting_459199	chr6_12038427_+	ENSG00000095951.15	ENST00000484210	hsa-miR-520a-3p	12038423	12038429	7mer-m8	12038409	12038430	140	-10.31
CAediting_459199	chr6_12038427_+	ENSG00000095951.15	ENST00000484210	hsa-miR-520b-3p	12038423	12038429	7mer-m8	12038410	12038430	140	-12.25
CAediting_459199	chr6_12038427_+	ENSG00000095951.15	ENST00000484210	hsa-miR-520c-3p	12038423	12038429	7mer-m8	12038409	12038430	140	-12.25
CAediting_459199	chr6_12038427_+	ENSG00000095951.15	ENST00000484210	hsa-miR-520d-3p	12038423	12038429	7mer-m8	12038409	12038430	140	-12.25
CAediting_459199	chr6_12038427_+	ENSG00000095951.15	ENST00000484210	hsa-miR-520e-3p	12038423	12038429	7mer-m8	12038410	12038430	142	-12.25
CAediting_459191	chr6_12037977_+	ENSG00000095951.15	ENST00000484210	hsa-miR-520f-3p	12037975	12037981	7mer-m8	12037961	12037982	140	-12.25
CAediting_459192	chr6_12037980_+	ENSG00000095951.15	ENST00000484210	hsa-miR-520f-3p	12037975	12037981	7mer-m8	12037961	12037982	140	-12.25
CAediting_459199	chr6_12038427_+	ENSG00000095951.15	ENST00000484210	hsa-miR-520g-3p	12038425	12038431	7mer-m8	12038410	12038432	152	-14.87
CAediting_459199	chr6_12038427_+	ENSG00000095951.15	ENST00000484210	hsa-miR-520h	12038425	12038431	7mer-m8	12038411	12038432	150	-14.67
CAediting_459199	chr6_12038427_+	ENSG00000095951.15	ENST00000484210	hsa-miR-526b-3p	12038424	12038430	7mer-m8	12038410	12038431	145	-10.99
CAediting_459187	chr6_12037852_+	ENSG00000095951.15	ENST00000484210	hsa-miR-550a-3-5p	12037850	12037857	8mer-1a	12037839	12037857	144	-18.18
CAediting_459188	chr6_12037856_+	ENSG00000095951.15	ENST00000484210	hsa-miR-550a-3-5p	12037850	12037857	8mer-1a	12037839	12037857	144	-18.18
CAediting_459187	chr6_12037852_+	ENSG00000095951.15	ENST00000484210	hsa-miR-550a-5p	12037850	12037857	8mer-1a	12037838	12037857	145	-20.36
CAediting_459188	chr6_12037856_+	ENSG00000095951.15	ENST00000484210	hsa-miR-550a-5p	12037850	12037857	8mer-1a	12037838	12037857	145	-20.36
CAediting_459187	chr6_12037852_+	ENSG00000095951.15	ENST00000484210	hsa-miR-550a-5p	12037850	12037857	8mer-1a	12037838	12037857	145	-20.36
CAediting_459188	chr6_12037856_+	ENSG00000095951.15	ENST00000484210	hsa-miR-550a-5p	12037850	12037857	8mer-1a	12037838	12037857	145	-20.36
CAediting_459188	chr6_12037856_+	ENSG00000095951.15	ENST00000484210	hsa-miR-550b-2-5p	12037851	12037857	7mer-m8	12037838	12037858	149	-21
CAediting_459188	chr6_12037856_+	ENSG00000095951.15	ENST00000484210	hsa-miR-550b-2-5p	12037851	12037857	7mer-m8	12037838	12037858	149	-21
CAediting_459195	chr6_12037991_+	ENSG00000095951.15	ENST00000484210	hsa-miR-6514-3p	12037988	12037994	7mer-m8	12037975	12037995	151	-13.6
CAediting_459187	chr6_12037852_+	ENSG00000095951.15	ENST00000484210	hsa-miR-6514-3p	12037849	12037855	7mer-m8	12037835	12037856	148	-15.11
CAediting_459188	chr6_12037856_+	ENSG00000095951.15	ENST00000484210	hsa-miR-6514-3p	12037849	12037855	7mer-m8	12037835	12037856	148	-15.11
CAediting_459196	chr6_12038007_+	ENSG00000095951.15	ENST00000484210	hsa-miR-675-5p	12038002	12038008	7mer-m8	12037987	12038009	142	-20.38
CAediting_459200	chr6_12038457_+	ENSG00000095951.15	ENST00000484210	hsa-miR-6790-3p	12038454	12038461	8mer-1a	12038436	12038461	144	-22.32
CAediting_459190	chr6_12037975_+	ENSG00000095951.15	ENST00000484210	hsa-miR-7109-5p	12037968	12037975	8mer-1a	12037955	12037975	147	-21.2
CAediting_459199	chr6_12038427_+	ENSG00000095951.15	ENST00000484210	hsa-miR-93-5p	12038424	12038430	7mer-m8	12038409	12038431	155	-22.18

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_980496	chr14_31014685_-	ENSG00000095951.15	ENST00000399469	hsa-miR-624-3p	12161621	12161627	7mer-m8	12161607	12161628	150	-23.55
CAediting_1229414	chr17_67471546_+	ENSG00000095951.15	ENST00000484210	hsa-miR-548aa	12037927	12037933	7mer-m8	12037910	12037934	140	-9.63
CAediting_1229415	chr17_67471547_+	ENSG00000095951.15	ENST00000484210	hsa-miR-548aa	12038174	12038180	7mer-1a	12038155	12038180	143	-15.65
CAediting_396018	chr5_1062918_-	ENSG00000095951.15	ENST00000484210	hsa-miR-4635	12037944	12037950	7mer-m8	12037931	12037951	142	-12.24
CAediting_396018	chr5_1062918_-	ENSG00000095951.15	ENST00000399469	hsa-miR-4635	12163375	12163382	8mer-1a	12163361	12163382	153	-18.84
CAediting_604450	chr7_133034877_-	ENSG00000095951.15	ENST00000399469	hsa-miR-3654	12164119	12164125	7mer-m8	12164106	12164126	142	-16.46

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_77128	chr1_85133844_+	ENSG00000095951.15	ENST00000484210	hsa-miR-4423-3p	12037865	12037871	7mer-m8	12037852	12037872	140	-13.39
CAediting_1368054	chr19_46709310_-	ENSG00000095951.15	ENST00000399469	hsa-miR-320e	12164017	12164023	7mer-m8	12164006	12164024	142	-12.2
CAediting_688080	chr9_63819626_+	ENSG00000095951.15	ENST00000399469	hsa-miR-4477b	12164527	12164534	8mer-1a	12164513	12164534	147	-6.4
CAediting_748296	chr10_51299626_+	ENSG00000095951.15	ENST00000399469	hsa-miR-605-3p	12163421	12163427	7mer-m8	12163405	12163428	142	-15.8
CAediting_748296	chr10_51299626_+	ENSG00000095951.15	ENST00000399469	hsa-miR-605-3p	12163346	12163352	7mer-m8	12163332	12163353	140	-15.29
CAediting_468389	chr6_31355314_-	ENSG00000095951.15	ENST00000399469	hsa-miR-6891-5p	12164520	12164526	7mer-m8	12164509	12164527	145	-18.96

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for HIVEP1

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST	ENST type	RNA structure without RNA A-to-I editing.	RNA structure with RNA A-to-I editing.
ENST00000484210.1	protein_coding

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID	ENST	Editing_Position	MFE_withoneAI	MFE_withoutAI	MFE_withmultipleAI
CAediting_459184	ENST00000484210.1	chr6_12037770_+	-554.80	-549.60	-580.10
CAediting_459185	ENST00000484210.1	chr6_12037840_+	-549.30	-549.60	-580.10
CAediting_459186	ENST00000484210.1	chr6_12037850_+	-549.60	-549.60	-580.10
CAediting_459187	ENST00000484210.1	chr6_12037852_+	-548.80	-549.60	-580.10
CAediting_459188	ENST00000484210.1	chr6_12037856_+	-554.40	-549.60	-580.10
CAediting_459189	ENST00000484210.1	chr6_12037949_+	-549.60	-549.60	-580.10
CAediting_459190	ENST00000484210.1	chr6_12037975_+	-549.30	-549.60	-580.10
CAediting_459191	ENST00000484210.1	chr6_12037977_+	-549.30	-549.60	-580.10
CAediting_459192	ENST00000484210.1	chr6_12037980_+	-554.40	-549.60	-580.10
CAediting_459193	ENST00000484210.1	chr6_12037984_+	-556.50	-549.60	-580.10
CAediting_459194	ENST00000484210.1	chr6_12037989_+	-549.60	-549.60	-580.10
CAediting_459195	ENST00000484210.1	chr6_12037991_+	-548.80	-549.60	-580.10
CAediting_459196	ENST00000484210.1	chr6_12038007_+	-555.00	-549.60	-580.10
CAediting_459197	ENST00000484210.1	chr6_12038418_+	-549.70	-549.60	-580.10
CAediting_459198	ENST00000484210.1	chr6_12038419_+	-549.60	-549.60	-580.10
CAediting_459199	ENST00000484210.1	chr6_12038427_+	-554.40	-549.60	-580.10
CAediting_459200	ENST00000484210.1	chr6_12038457_+	-548.70	-549.60	-580.10
CAediting_459201	ENST00000484210.1	chr6_12038525_+	-549.30	-549.60	-580.10
CAediting_459202	ENST00000484210.1	chr6_12038545_+	-554.40	-549.60	-580.10
CAediting_459203	ENST00000484210.1	chr6_12038613_+	-548.90	-549.60	-580.10
CAediting_459204	ENST00000484210.1	chr6_12038617_+	-548.70	-549.60	-580.10
CAediting_459205	ENST00000484210.1	chr6_12038621_+	-549.60	-549.60	-580.10

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Relation with ADAR for HIVEP1

Correlation between ADAR gene expression and RNA editing frequency

Cancer

CAeditomID

position

ADAR1 (p-val)

ADAR1 (coeff.)

ADAR2 (p-val)

ADAR2 (coeff.)

ADAR3 (p-val)

ADAR3 (coeff.)

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Relation with cancer stages for HIVEP1

Correlation between Cancer stages and RNA editing frequency

Cancer

Stage_type

CAeditomID

position

P-val

Coeff.

Top

Relation with survival for HIVEP1

Correlation between RNA editing and survival

Cancer

CAeditomID

position

KMpvalue

Coxpvalue

CoxHR

Top

RelatedDrugs for HIVEP1

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for HIVEP1

Diseases associated with this gene.
(DisGeNet 7.0)

Gene

Disease ID

Disease name

# pubmeds

Source

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene