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Editing gene: HADHB (CAeditome ID:3032)

Gene summary for HADHB

Gene summary

Gene information	Gene symbol	HADHB
	Gene ID	3032
	Gene name	hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit beta
	Synonyms	ECHB\|MSTP029\|MTPB\|TP-BETA
	Cytomap	2p23.3
	Type of gene	protein-coding
	Description	trifunctional enzyme subunit beta, mitochondrial2-enoyl-Coenzyme A (CoA) hydratase, beta subunit3-ketoacyl-Coenzyme A (CoA) thiolase of mitochondrial trifunctional protein, beta subunitacetyl-CoA acyltransferasebeta-ketothiolasehydroxyacyl-CoA dehydr
	Modification date	20210518
	UniProtAcc	P55084
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene	GO ID	GO term	PubMed ID
HADHB	GO:0005739	Trifunctional enzyme subunit beta, mitochondrial	0000052
HADHB	GO:0005741	Trifunctional enzyme subunit beta, mitochondrial	21527675
HADHB	GO:0005743	Trifunctional enzyme subunit beta, mitochondrial	21527675
HADHB	GO:0005783	Trifunctional enzyme subunit beta, mitochondrial	21527675
HADHB	GO:0042645	Trifunctional enzyme subunit beta, mitochondrial	18063578

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RNA A-to-I events for HADHB

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000138029.12

RNA A-to-I editing events in Cancer.

CAediting_162750(26255244, +), CAediting_162751(26255245, +), CAediting_162752(26255271, +), CAediting_162753(26255301, +), CAediting_162754(26255314, +), CAediting_162755(26255324, +), CAediting_162756(26255335, +), CAediting_162757(26255338, +), CAediting_162758(26255340, +), CAediting_162759(26255361, +), CAediting_162760(26255371, +), CAediting_162761(26255379, +), CAediting_162762(26255419, +), CAediting_162763(26255420, +), CAediting_162764(26255444, +), CAediting_162765(26255454, +), CAediting_162766(26255456, +), CAediting_162767(26255522, +), CAediting_162768(26257184, +), CAediting_162769(26257238, +), CAediting_162770(26257331, +), CAediting_162771(26257367, +), CAediting_162772(26257394, +), CAediting_162773(26258005, +), CAediting_162774(26260151, +), CAediting_162775(26260182, +), CAediting_162776(26260199, +), CAediting_162777(26260211, +), CAediting_162778(26260221, +), CAediting_162779(26260247, +), CAediting_162780(26260248, +), CAediting_162781(26260256, +), CAediting_162782(26260265, +), CAediting_162783(26260311, +), CAediting_162784(26260317, +), CAediting_162785(26260318, +), CAediting_162786(26260334, +), CAediting_162787(26260343, +), CAediting_162788(26260351, +), CAediting_162789(26260356, +), CAediting_162790(26260688, +), CAediting_162791(26261541, +), CAediting_162792(26261542, +), CAediting_162793(26261592, +), CAediting_162794(26261596, +), CAediting_162795(26261599, +), CAediting_162796(26261604, +), CAediting_162797(26261610, +), CAediting_162798(26261613, +), CAediting_162799(26261655, +), CAediting_162800(26261661, +), CAediting_162801(26261681, +), CAediting_162802(26261686, +), CAediting_162803(26261704, +), CAediting_162804(26261725, +), CAediting_162805(26263022, +), CAediting_162806(26263031, +), CAediting_162807(26263044, +), CAediting_162808(26263045, +), CAediting_162809(26263053, +), CAediting_162810(26263085, +), CAediting_162811(26263101, +), CAediting_162812(26263129, +), CAediting_162813(26263135, +), CAediting_162814(26263138, +), CAediting_162815(26263139, +), CAediting_162816(26263140, +), CAediting_162817(26263143, +), CAediting_162818(26263188, +), CAediting_162819(26263205, +), CAediting_162820(26263220, +), CAediting_162821(26263249, +), CAediting_162822(26265946, +), CAediting_162823(26267557, +), CAediting_162824(26267878, +), CAediting_162825(26267885, +), CAediting_162826(26267966, +), CAediting_162827(26267977, +), CAediting_162828(26268045, +), CAediting_162829(26268883, +), CAediting_162830(26268976, +), CAediting_162831(26268998, +), CAediting_162832(26269029, +), CAediting_162833(26269274, +), CAediting_162834(26269294, +), CAediting_162835(26269295, +), CAediting_162836(26269298, +), CAediting_162837(26269320, +), CAediting_162838(26269328, +), CAediting_162839(26269334, +), CAediting_162840(26269336, +), CAediting_162841(26269360, +), CAediting_162842(26269406, +), CAediting_162843(26269410, +), CAediting_162844(26269463, +), CAediting_162845(26271495, +), CAediting_162846(26271518, +), CAediting_162847(26271681, +), CAediting_162848(26271689, +), CAediting_162849(26271849, +), CAediting_162850(26280598, +), CAediting_162851(26280733, +), CAediting_162852(26280760, +), CAediting_162853(26280800, +), CAediting_162854(26280804, +), CAediting_162855(26280807, +), CAediting_162856(26280812, +), CAediting_162857(26285763, +), CAediting_162858(26285789, +), CAediting_162859(26285807, +), CAediting_162860(26285812, +), CAediting_162861(26285817, +), CAediting_162862(26285818, +), CAediting_162863(26285837, +), CAediting_162864(26285855, +), CAediting_162865(26285864, +), CAediting_162866(26285867, +), CAediting_162867(26285872, +), CAediting_162868(26285877, +), CAediting_162869(26285899, +), CAediting_162870(26285903, +), CAediting_162871(26285904, +), CAediting_162872(26285918, +), CAediting_162873(26285921, +), CAediting_162874(26285927, +), CAediting_162875(26285938, +), CAediting_162876(26285947, +), CAediting_162877(26285952, +), CAediting_162878(26285960, +), CAediting_162879(26285972, +), CAediting_162880(26285973, +), CAediting_162881(26285981, +), CAediting_162882(26286522, +), CAediting_162883(26286526, +), CAediting_162884(26286546, +), CAediting_162885(26286558, +), CAediting_162886(26286597, +), CAediting_162887(26286620, +), CAediting_162888(26286629, +), CAediting_162889(26286632, +), CAediting_162890(26286642, +), CAediting_162891(26286659, +), CAediting_162892(26286689, +), CAediting_162893(26287020, +), CAediting_162894(26287028, +), CAediting_162895(26287044, +), CAediting_162896(26287083, +), CAediting_162897(26287084, +), CAediting_162898(26287089, +), CAediting_162899(26287093, +), CAediting_162900(26287125, +), CAediting_162901(26287185, +), CAediting_162902(26287998, +), CAediting_162903(26288003, +), CAediting_162904(26288020, +), CAediting_162905(26288033, +), CAediting_162906(26288057, +), CAediting_162907(26288060, +), CAediting_162908(26288061, +), CAediting_162909(26288071, +), CAediting_162910(26288083, +), CAediting_162911(26288088, +), CAediting_162912(26288089, +), CAediting_162913(26288090, +), CAediting_162914(26288091, +), CAediting_162915(26288102, +), CAediting_162916(26288105, +), CAediting_162917(26288111, +), CAediting_162918(26288114, +), CAediting_162919(26288116, +), CAediting_162920(26288120, +), CAediting_162921(26288124, +), CAediting_162922(26288128, +), CAediting_162923(26288136, +), CAediting_162924(26288160, +), CAediting_162925(26288167, +), CAediting_162926(26288174, +), CAediting_162927(26288185, +), CAediting_162928(26288216, +), CAediting_162929(26288240, +), CAediting_162930(26288431, +), CAediting_162931(26288440, +), CAediting_162932(26288453, +), CAediting_162933(26288476, +), CAediting_162934(26288484, +), CAediting_162935(26288494, +), CAediting_162936(26288499, +), CAediting_162937(26288502, +), CAediting_162938(26288525, +), CAediting_162939(26288530, +), CAediting_162940(26288531, +), CAediting_162941(26288538, +), CAediting_162942(26288544, +), CAediting_162943(26288547, +), CAediting_162944(26288562, +), CAediting_162945(26288588, +), CAediting_162946(26288594, +), CAediting_162947(26288598, +), CAediting_162948(26288617, +), CAediting_162949(26288621, +), CAediting_162950(26288624, +), CAediting_162951(26288629, +), CAediting_162952(26288637, +), CAediting_162953(26288691, +), CAediting_162954(26288697, +), CAediting_162955(26288710, +), CAediting_162956(26288978, +), CAediting_162957(26288996, +), CAediting_162958(26288997, +), CAediting_162959(26289004, +), CAediting_162960(26289012, +), CAediting_162961(26289028, +), CAediting_162962(26289039, +), CAediting_162963(26289063, +), CAediting_162964(26289065, +), CAediting_162965(26289071, +), CAediting_162966(26289073, +), CAediting_162967(26289084, +), CAediting_162968(26289093, +), CAediting_162969(26289103, +), CAediting_162970(26289129, +), CAediting_162971(26289135, +), CAediting_162972(26289139, +), CAediting_162973(26289170, +), CAediting_162974(26289171, +), CAediting_162975(26289826, +),

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RNA editing positional annotations for HADHB using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_162750	chr2_26255244_+	intronic
CAediting_162751	chr2_26255245_+	intronic
CAediting_162752	chr2_26255271_+	intronic
CAediting_162753	chr2_26255301_+	intronic
CAediting_162754	chr2_26255314_+	intronic
CAediting_162755	chr2_26255324_+	intronic
CAediting_162756	chr2_26255335_+	intronic
CAediting_162757	chr2_26255338_+	intronic
CAediting_162758	chr2_26255340_+	intronic
CAediting_162759	chr2_26255361_+	intronic
CAediting_162760	chr2_26255371_+	intronic
CAediting_162761	chr2_26255379_+	intronic
CAediting_162762	chr2_26255419_+	intronic
CAediting_162763	chr2_26255420_+	intronic
CAediting_162764	chr2_26255444_+	intronic
CAediting_162765	chr2_26255454_+	intronic
CAediting_162766	chr2_26255456_+	intronic
CAediting_162767	chr2_26255522_+	intronic
CAediting_162768	chr2_26257184_+	intronic
CAediting_162769	chr2_26257238_+	intronic
CAediting_162770	chr2_26257331_+	intronic
CAediting_162771	chr2_26257367_+	intronic
CAediting_162772	chr2_26257394_+	intronic
CAediting_162773	chr2_26258005_+	intronic
CAediting_162774	chr2_26260151_+	intronic
CAediting_162775	chr2_26260182_+	intronic
CAediting_162776	chr2_26260199_+	intronic
CAediting_162777	chr2_26260211_+	intronic
CAediting_162778	chr2_26260221_+	intronic
CAediting_162779	chr2_26260247_+	intronic
CAediting_162780	chr2_26260248_+	intronic
CAediting_162781	chr2_26260256_+	intronic
CAediting_162782	chr2_26260265_+	intronic
CAediting_162783	chr2_26260311_+	intronic
CAediting_162784	chr2_26260317_+	intronic
CAediting_162785	chr2_26260318_+	intronic
CAediting_162786	chr2_26260334_+	intronic
CAediting_162787	chr2_26260343_+	intronic
CAediting_162788	chr2_26260351_+	intronic
CAediting_162789	chr2_26260356_+	intronic
CAediting_162790	chr2_26260688_+	ncRNA_exonic
CAediting_162791	chr2_26261541_+	ncRNA_exonic
CAediting_162792	chr2_26261542_+	ncRNA_exonic
CAediting_162793	chr2_26261592_+	ncRNA_exonic
CAediting_162794	chr2_26261596_+	ncRNA_intronic
CAediting_162795	chr2_26261599_+	ncRNA_intronic
CAediting_162796	chr2_26261604_+	ncRNA_intronic
CAediting_162797	chr2_26261610_+	ncRNA_intronic
CAediting_162798	chr2_26261613_+	ncRNA_intronic
CAediting_162799	chr2_26261655_+	ncRNA_intronic
CAediting_162800	chr2_26261661_+	ncRNA_intronic
CAediting_162801	chr2_26261681_+	ncRNA_intronic
CAediting_162802	chr2_26261686_+	ncRNA_intronic
CAediting_162803	chr2_26261704_+	ncRNA_intronic
CAediting_162804	chr2_26261725_+	ncRNA_intronic
CAediting_162805	chr2_26263022_+	ncRNA_intronic
CAediting_162806	chr2_26263031_+	ncRNA_intronic
CAediting_162807	chr2_26263044_+	ncRNA_intronic
CAediting_162808	chr2_26263045_+	ncRNA_intronic
CAediting_162809	chr2_26263053_+	ncRNA_intronic
CAediting_162810	chr2_26263085_+	ncRNA_intronic
CAediting_162811	chr2_26263101_+	ncRNA_intronic
CAediting_162812	chr2_26263129_+	ncRNA_intronic
CAediting_162813	chr2_26263135_+	ncRNA_intronic
CAediting_162814	chr2_26263138_+	ncRNA_intronic
CAediting_162815	chr2_26263139_+	ncRNA_intronic
CAediting_162816	chr2_26263140_+	ncRNA_intronic
CAediting_162817	chr2_26263143_+	ncRNA_intronic
CAediting_162818	chr2_26263188_+	ncRNA_intronic
CAediting_162819	chr2_26263205_+	ncRNA_intronic
CAediting_162820	chr2_26263220_+	ncRNA_intronic
CAediting_162821	chr2_26263249_+	ncRNA_intronic
CAediting_162822	chr2_26265946_+	ncRNA_intronic
CAediting_162823	chr2_26267557_+	ncRNA_intronic
CAediting_162824	chr2_26267878_+	ncRNA_intronic
CAediting_162825	chr2_26267885_+	ncRNA_intronic
CAediting_162826	chr2_26267966_+	ncRNA_intronic
CAediting_162827	chr2_26267977_+	ncRNA_intronic
CAediting_162828	chr2_26268045_+	ncRNA_intronic
CAediting_162829	chr2_26268883_+	ncRNA_intronic
CAediting_162830	chr2_26268976_+	ncRNA_intronic
CAediting_162831	chr2_26268998_+	ncRNA_intronic
CAediting_162832	chr2_26269029_+	ncRNA_intronic
CAediting_162833	chr2_26269274_+	ncRNA_intronic
CAediting_162834	chr2_26269294_+	ncRNA_intronic
CAediting_162835	chr2_26269295_+	ncRNA_intronic
CAediting_162836	chr2_26269298_+	ncRNA_intronic
CAediting_162837	chr2_26269320_+	ncRNA_intronic
CAediting_162838	chr2_26269328_+	ncRNA_intronic
CAediting_162839	chr2_26269334_+	ncRNA_intronic
CAediting_162840	chr2_26269336_+	ncRNA_intronic
CAediting_162841	chr2_26269360_+	ncRNA_intronic
CAediting_162842	chr2_26269406_+	ncRNA_intronic
CAediting_162843	chr2_26269410_+	ncRNA_intronic
CAediting_162844	chr2_26269463_+	ncRNA_intronic
CAediting_162845	chr2_26271495_+	ncRNA_intronic
CAediting_162846	chr2_26271518_+	ncRNA_intronic
CAediting_162847	chr2_26271681_+	ncRNA_intronic
CAediting_162848	chr2_26271689_+	ncRNA_intronic
CAediting_162849	chr2_26271849_+	ncRNA_intronic
CAediting_162850	chr2_26280598_+	ncRNA_intronic
CAediting_162851	chr2_26280733_+	ncRNA_intronic
CAediting_162852	chr2_26280760_+	ncRNA_intronic
CAediting_162853	chr2_26280800_+	ncRNA_intronic
CAediting_162854	chr2_26280804_+	ncRNA_intronic
CAediting_162855	chr2_26280807_+	ncRNA_intronic
CAediting_162856	chr2_26280812_+	ncRNA_intronic
CAediting_162857	chr2_26285763_+	ncRNA_intronic
CAediting_162858	chr2_26285789_+	ncRNA_intronic
CAediting_162859	chr2_26285807_+	ncRNA_intronic
CAediting_162860	chr2_26285812_+	ncRNA_intronic
CAediting_162861	chr2_26285817_+	ncRNA_intronic
CAediting_162862	chr2_26285818_+	ncRNA_intronic
CAediting_162863	chr2_26285837_+	ncRNA_intronic
CAediting_162864	chr2_26285855_+	ncRNA_intronic
CAediting_162865	chr2_26285864_+	ncRNA_intronic
CAediting_162866	chr2_26285867_+	ncRNA_intronic
CAediting_162867	chr2_26285872_+	ncRNA_intronic
CAediting_162868	chr2_26285877_+	ncRNA_intronic
CAediting_162869	chr2_26285899_+	ncRNA_intronic
CAediting_162870	chr2_26285903_+	ncRNA_intronic
CAediting_162871	chr2_26285904_+	ncRNA_intronic
CAediting_162872	chr2_26285918_+	ncRNA_intronic
CAediting_162873	chr2_26285921_+	ncRNA_intronic
CAediting_162874	chr2_26285927_+	ncRNA_intronic
CAediting_162875	chr2_26285938_+	ncRNA_intronic
CAediting_162876	chr2_26285947_+	ncRNA_intronic
CAediting_162877	chr2_26285952_+	ncRNA_intronic
CAediting_162878	chr2_26285960_+	ncRNA_intronic
CAediting_162879	chr2_26285972_+	ncRNA_intronic
CAediting_162880	chr2_26285973_+	ncRNA_intronic
CAediting_162881	chr2_26285981_+	ncRNA_intronic
CAediting_162882	chr2_26286522_+	ncRNA_intronic
CAediting_162883	chr2_26286526_+	ncRNA_intronic
CAediting_162884	chr2_26286546_+	ncRNA_intronic
CAediting_162885	chr2_26286558_+	ncRNA_intronic
CAediting_162886	chr2_26286597_+	ncRNA_intronic
CAediting_162887	chr2_26286620_+	ncRNA_intronic
CAediting_162888	chr2_26286629_+	ncRNA_intronic
CAediting_162889	chr2_26286632_+	ncRNA_intronic
CAediting_162890	chr2_26286642_+	ncRNA_intronic
CAediting_162891	chr2_26286659_+	ncRNA_intronic
CAediting_162892	chr2_26286689_+	ncRNA_intronic
CAediting_162893	chr2_26287020_+	ncRNA_intronic
CAediting_162894	chr2_26287028_+	ncRNA_intronic
CAediting_162895	chr2_26287044_+	ncRNA_intronic
CAediting_162896	chr2_26287083_+	ncRNA_intronic
CAediting_162897	chr2_26287084_+	ncRNA_intronic
CAediting_162898	chr2_26287089_+	ncRNA_intronic
CAediting_162899	chr2_26287093_+	ncRNA_intronic
CAediting_162900	chr2_26287125_+	ncRNA_intronic
CAediting_162901	chr2_26287185_+	ncRNA_intronic
CAediting_162902	chr2_26287998_+	ncRNA_intronic
CAediting_162903	chr2_26288003_+	ncRNA_intronic
CAediting_162904	chr2_26288020_+	ncRNA_intronic
CAediting_162905	chr2_26288033_+	ncRNA_intronic
CAediting_162906	chr2_26288057_+	ncRNA_intronic
CAediting_162907	chr2_26288060_+	ncRNA_intronic
CAediting_162908	chr2_26288061_+	ncRNA_intronic
CAediting_162909	chr2_26288071_+	ncRNA_intronic
CAediting_162910	chr2_26288083_+	ncRNA_intronic
CAediting_162911	chr2_26288088_+	ncRNA_intronic
CAediting_162912	chr2_26288089_+	ncRNA_intronic
CAediting_162913	chr2_26288090_+	ncRNA_intronic
CAediting_162914	chr2_26288091_+	ncRNA_intronic
CAediting_162915	chr2_26288102_+	ncRNA_intronic
CAediting_162916	chr2_26288105_+	ncRNA_intronic
CAediting_162917	chr2_26288111_+	ncRNA_intronic
CAediting_162918	chr2_26288114_+	ncRNA_intronic
CAediting_162919	chr2_26288116_+	ncRNA_intronic
CAediting_162920	chr2_26288120_+	ncRNA_intronic
CAediting_162921	chr2_26288124_+	ncRNA_intronic
CAediting_162922	chr2_26288128_+	ncRNA_intronic
CAediting_162923	chr2_26288136_+	ncRNA_intronic
CAediting_162924	chr2_26288160_+	ncRNA_intronic
CAediting_162925	chr2_26288167_+	ncRNA_intronic
CAediting_162926	chr2_26288174_+	ncRNA_intronic
CAediting_162927	chr2_26288185_+	ncRNA_intronic
CAediting_162928	chr2_26288216_+	ncRNA_intronic
CAediting_162929	chr2_26288240_+	ncRNA_intronic
CAediting_162930	chr2_26288431_+	ncRNA_intronic
CAediting_162931	chr2_26288440_+	ncRNA_intronic
CAediting_162932	chr2_26288453_+	ncRNA_intronic
CAediting_162933	chr2_26288476_+	ncRNA_intronic
CAediting_162934	chr2_26288484_+	ncRNA_intronic
CAediting_162935	chr2_26288494_+	ncRNA_intronic
CAediting_162936	chr2_26288499_+	ncRNA_intronic
CAediting_162937	chr2_26288502_+	ncRNA_intronic
CAediting_162938	chr2_26288525_+	ncRNA_intronic
CAediting_162939	chr2_26288530_+	ncRNA_intronic
CAediting_162940	chr2_26288531_+	ncRNA_intronic
CAediting_162941	chr2_26288538_+	ncRNA_intronic
CAediting_162942	chr2_26288544_+	ncRNA_intronic
CAediting_162943	chr2_26288547_+	ncRNA_intronic
CAediting_162944	chr2_26288562_+	ncRNA_intronic
CAediting_162945	chr2_26288588_+	ncRNA_intronic
CAediting_162946	chr2_26288594_+	ncRNA_intronic
CAediting_162947	chr2_26288598_+	ncRNA_intronic
CAediting_162948	chr2_26288617_+	ncRNA_intronic
CAediting_162949	chr2_26288621_+	ncRNA_intronic
CAediting_162950	chr2_26288624_+	ncRNA_intronic
CAediting_162951	chr2_26288629_+	ncRNA_intronic
CAediting_162952	chr2_26288637_+	ncRNA_intronic
CAediting_162953	chr2_26288691_+	ncRNA_intronic
CAediting_162954	chr2_26288697_+	ncRNA_intronic
CAediting_162955	chr2_26288710_+	ncRNA_intronic
CAediting_162956	chr2_26288978_+	ncRNA_intronic
CAediting_162957	chr2_26288996_+	ncRNA_intronic
CAediting_162958	chr2_26288997_+	ncRNA_intronic
CAediting_162959	chr2_26289004_+	ncRNA_intronic
CAediting_162960	chr2_26289012_+	ncRNA_intronic
CAediting_162961	chr2_26289028_+	ncRNA_intronic
CAediting_162962	chr2_26289039_+	ncRNA_intronic
CAediting_162963	chr2_26289063_+	ncRNA_intronic
CAediting_162964	chr2_26289065_+	ncRNA_intronic
CAediting_162965	chr2_26289071_+	ncRNA_intronic
CAediting_162966	chr2_26289073_+	ncRNA_intronic
CAediting_162967	chr2_26289084_+	ncRNA_intronic
CAediting_162968	chr2_26289093_+	ncRNA_intronic
CAediting_162969	chr2_26289103_+	ncRNA_intronic
CAediting_162970	chr2_26289129_+	ncRNA_intronic
CAediting_162971	chr2_26289135_+	ncRNA_intronic
CAediting_162972	chr2_26289139_+	ncRNA_intronic
CAediting_162973	chr2_26289170_+	ncRNA_intronic
CAediting_162974	chr2_26289171_+	ncRNA_intronic
CAediting_162975	chr2_26289826_+	ncRNA_intronic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_162750	chr2_26255244_+	SINE	Alu	AluSx
CAediting_162751	chr2_26255245_+	SINE	Alu	AluSx
CAediting_162752	chr2_26255271_+	SINE	Alu	AluSx
CAediting_162753	chr2_26255301_+	SINE	Alu	AluSx
CAediting_162754	chr2_26255314_+	SINE	Alu	AluSx
CAediting_162755	chr2_26255324_+	SINE	Alu	AluSx
CAediting_162756	chr2_26255335_+	SINE	Alu	AluSx
CAediting_162757	chr2_26255338_+	SINE	Alu	AluSx
CAediting_162758	chr2_26255340_+	SINE	Alu	AluSx
CAediting_162759	chr2_26255361_+	SINE	Alu	AluSx
CAediting_162760	chr2_26255371_+	SINE	Alu	AluSx
CAediting_162761	chr2_26255379_+	SINE	Alu	AluSx
CAediting_162762	chr2_26255419_+	SINE	Alu	AluSx
CAediting_162763	chr2_26255420_+	SINE	Alu	AluSx
CAediting_162764	chr2_26255444_+	SINE	Alu	AluSx
CAediting_162765	chr2_26255454_+	SINE	Alu	AluSx
CAediting_162766	chr2_26255456_+	SINE	Alu	AluSx
CAediting_162767	chr2_26255522_+	SINE	Alu	AluSx
CAediting_162768	chr2_26257184_+	SINE	Alu	AluY
CAediting_162769	chr2_26257238_+	SINE	Alu	AluY
CAediting_162770	chr2_26257331_+	SINE	Alu	AluY
CAediting_162771	chr2_26257367_+	SINE	Alu	AluY
CAediting_162772	chr2_26257394_+	SINE	Alu	AluY
CAediting_162773	chr2_26258005_+	SINE	Alu	AluY
CAediting_162774	chr2_26260151_+	SINE	Alu	AluSz
CAediting_162775	chr2_26260182_+	SINE	Alu	AluSz
CAediting_162776	chr2_26260199_+	SINE	Alu	AluSz
CAediting_162777	chr2_26260211_+	SINE	Alu	AluSz
CAediting_162778	chr2_26260221_+	SINE	Alu	AluSz
CAediting_162779	chr2_26260247_+	SINE	Alu	AluSz
CAediting_162780	chr2_26260248_+	SINE	Alu	AluSz
CAediting_162781	chr2_26260256_+	SINE	Alu	AluSz
CAediting_162782	chr2_26260265_+	SINE	Alu	AluSz
CAediting_162783	chr2_26260311_+	SINE	Alu	AluSz
CAediting_162784	chr2_26260317_+	SINE	Alu	AluSz
CAediting_162785	chr2_26260318_+	SINE	Alu	AluSz
CAediting_162786	chr2_26260334_+	SINE	Alu	AluSz
CAediting_162787	chr2_26260343_+	SINE	Alu	AluSz
CAediting_162788	chr2_26260351_+	SINE	Alu	AluSz
CAediting_162789	chr2_26260356_+	SINE	Alu	AluSz
CAediting_162791	chr2_26261541_+	SINE	Alu	AluSz
CAediting_162792	chr2_26261542_+	SINE	Alu	AluSz
CAediting_162793	chr2_26261592_+	SINE	Alu	AluSz
CAediting_162794	chr2_26261596_+	SINE	Alu	AluSz
CAediting_162795	chr2_26261599_+	SINE	Alu	AluSz
CAediting_162796	chr2_26261604_+	SINE	Alu	AluSz
CAediting_162797	chr2_26261610_+	SINE	Alu	AluSz
CAediting_162798	chr2_26261613_+	SINE	Alu	AluSz
CAediting_162799	chr2_26261655_+	SINE	Alu	AluSz
CAediting_162800	chr2_26261661_+	SINE	Alu	AluSz
CAediting_162801	chr2_26261681_+	SINE	Alu	AluSz
CAediting_162802	chr2_26261686_+	SINE	Alu	AluSz
CAediting_162803	chr2_26261704_+	SINE	Alu	AluSz
CAediting_162804	chr2_26261725_+	SINE	Alu	AluSz
CAediting_162805	chr2_26263022_+	SINE	Alu	AluSx1
CAediting_162806	chr2_26263031_+	SINE	Alu	AluSx1
CAediting_162807	chr2_26263044_+	SINE	Alu	AluSx1
CAediting_162808	chr2_26263045_+	SINE	Alu	AluSx1
CAediting_162809	chr2_26263053_+	SINE	Alu	AluSx1
CAediting_162810	chr2_26263085_+	SINE	Alu	AluSx1
CAediting_162811	chr2_26263101_+	SINE	Alu	AluSx1
CAediting_162812	chr2_26263129_+	SINE	Alu	AluSx1
CAediting_162813	chr2_26263135_+	SINE	Alu	AluSx1
CAediting_162814	chr2_26263138_+	SINE	Alu	AluSx1
CAediting_162815	chr2_26263139_+	SINE	Alu	AluSx1
CAediting_162816	chr2_26263140_+	SINE	Alu	AluSx1
CAediting_162817	chr2_26263143_+	SINE	Alu	AluSx1
CAediting_162818	chr2_26263188_+	SINE	Alu	AluSx1
CAediting_162819	chr2_26263205_+	SINE	Alu	AluSx1
CAediting_162820	chr2_26263220_+	SINE	Alu	AluSx1
CAediting_162821	chr2_26263249_+	SINE	Alu	AluSx1
CAediting_162822	chr2_26265946_+	SINE	Alu	AluJr
CAediting_162823	chr2_26267557_+	SINE	Alu	AluSx1
CAediting_162824	chr2_26267878_+	SINE	Alu	AluJr
CAediting_162825	chr2_26267885_+	SINE	Alu	AluJr
CAediting_162826	chr2_26267966_+	SINE	Alu	AluJr
CAediting_162827	chr2_26267977_+	SINE	Alu	AluJr
CAediting_162828	chr2_26268045_+	SINE	Alu	AluJr
CAediting_162829	chr2_26268883_+	SINE	Alu	AluSq2
CAediting_162830	chr2_26268976_+	SINE	Alu	AluSq2
CAediting_162831	chr2_26268998_+	SINE	Alu	AluSq2
CAediting_162832	chr2_26269029_+	SINE	Alu	AluSq2
CAediting_162833	chr2_26269274_+	SINE	Alu	AluJr
CAediting_162834	chr2_26269294_+	SINE	Alu	AluJr
CAediting_162835	chr2_26269295_+	SINE	Alu	AluJr
CAediting_162836	chr2_26269298_+	SINE	Alu	AluJr
CAediting_162837	chr2_26269320_+	SINE	Alu	AluJr
CAediting_162838	chr2_26269328_+	SINE	Alu	AluJr
CAediting_162839	chr2_26269334_+	SINE	Alu	AluJr
CAediting_162840	chr2_26269336_+	SINE	Alu	AluJr
CAediting_162841	chr2_26269360_+	SINE	Alu	AluJr
CAediting_162842	chr2_26269406_+	SINE	Alu	AluJr
CAediting_162843	chr2_26269410_+	SINE	Alu	AluJr
CAediting_162844	chr2_26269463_+	SINE	Alu	AluJr
CAediting_162845	chr2_26271495_+	SINE	Alu	AluSp
CAediting_162846	chr2_26271518_+	SINE	Alu	AluSp
CAediting_162847	chr2_26271681_+	SINE	Alu	AluJr4
CAediting_162848	chr2_26271689_+	SINE	Alu	AluJr4
CAediting_162849	chr2_26271849_+	SINE	Alu	AluJr4
CAediting_162850	chr2_26280598_+	SINE	Alu	AluSp
CAediting_162851	chr2_26280733_+	SINE	Alu	AluSp
CAediting_162852	chr2_26280760_+	SINE	Alu	AluSp
CAediting_162853	chr2_26280800_+	SINE	Alu	AluSp
CAediting_162854	chr2_26280804_+	SINE	Alu	AluSp
CAediting_162855	chr2_26280807_+	SINE	Alu	AluSp
CAediting_162856	chr2_26280812_+	SINE	Alu	AluSp
CAediting_162857	chr2_26285763_+	SINE	Alu	AluSz6
CAediting_162858	chr2_26285789_+	SINE	Alu	AluSz6
CAediting_162859	chr2_26285807_+	SINE	Alu	AluSz6
CAediting_162860	chr2_26285812_+	SINE	Alu	AluSz6
CAediting_162861	chr2_26285817_+	SINE	Alu	AluSz6
CAediting_162862	chr2_26285818_+	SINE	Alu	AluSz6
CAediting_162863	chr2_26285837_+	SINE	Alu	AluSz6
CAediting_162864	chr2_26285855_+	SINE	Alu	AluSz6
CAediting_162865	chr2_26285864_+	SINE	Alu	AluSz6
CAediting_162866	chr2_26285867_+	SINE	Alu	AluSz6
CAediting_162867	chr2_26285872_+	SINE	Alu	AluSz6
CAediting_162868	chr2_26285877_+	SINE	Alu	AluSz6
CAediting_162869	chr2_26285899_+	SINE	Alu	AluSz6
CAediting_162870	chr2_26285903_+	SINE	Alu	AluSz6
CAediting_162871	chr2_26285904_+	SINE	Alu	AluSz6
CAediting_162872	chr2_26285918_+	SINE	Alu	AluSz6
CAediting_162873	chr2_26285921_+	SINE	Alu	AluSz6
CAediting_162874	chr2_26285927_+	SINE	Alu	AluSz6
CAediting_162875	chr2_26285938_+	SINE	Alu	AluSz6
CAediting_162876	chr2_26285947_+	SINE	Alu	AluSz6
CAediting_162877	chr2_26285952_+	SINE	Alu	AluSz6
CAediting_162878	chr2_26285960_+	SINE	Alu	AluSz6
CAediting_162879	chr2_26285972_+	SINE	Alu	AluSz6
CAediting_162880	chr2_26285973_+	SINE	Alu	AluSz6
CAediting_162881	chr2_26285981_+	SINE	Alu	AluSz6
CAediting_162882	chr2_26286522_+	SINE	Alu	AluSx1
CAediting_162883	chr2_26286526_+	SINE	Alu	AluSx1
CAediting_162884	chr2_26286546_+	SINE	Alu	AluSx1
CAediting_162885	chr2_26286558_+	SINE	Alu	AluSx1
CAediting_162886	chr2_26286597_+	SINE	Alu	AluSx1
CAediting_162887	chr2_26286620_+	SINE	Alu	AluSx1
CAediting_162888	chr2_26286629_+	SINE	Alu	AluSx1
CAediting_162889	chr2_26286632_+	SINE	Alu	AluSx1
CAediting_162890	chr2_26286642_+	SINE	Alu	AluSx1
CAediting_162891	chr2_26286659_+	SINE	Alu	AluSx1
CAediting_162892	chr2_26286689_+	SINE	Alu	AluSx1
CAediting_162893	chr2_26287020_+	SINE	Alu	AluSz
CAediting_162894	chr2_26287028_+	SINE	Alu	AluSz
CAediting_162895	chr2_26287044_+	SINE	Alu	AluSz
CAediting_162896	chr2_26287083_+	SINE	Alu	AluSz
CAediting_162897	chr2_26287084_+	SINE	Alu	AluSz
CAediting_162898	chr2_26287089_+	SINE	Alu	AluSz
CAediting_162899	chr2_26287093_+	SINE	Alu	AluSz
CAediting_162900	chr2_26287125_+	SINE	Alu	AluSz
CAediting_162901	chr2_26287185_+	SINE	Alu	AluSz
CAediting_162902	chr2_26287998_+	SINE	Alu	AluJb
CAediting_162903	chr2_26288003_+	SINE	Alu	AluJb
CAediting_162904	chr2_26288020_+	SINE	Alu	AluJb
CAediting_162905	chr2_26288033_+	SINE	Alu	AluJb
CAediting_162906	chr2_26288057_+	SINE	Alu	AluJb
CAediting_162907	chr2_26288060_+	SINE	Alu	AluJb
CAediting_162908	chr2_26288061_+	SINE	Alu	AluJb
CAediting_162909	chr2_26288071_+	SINE	Alu	AluJb
CAediting_162910	chr2_26288083_+	SINE	Alu	AluJb
CAediting_162911	chr2_26288088_+	SINE	Alu	AluJb
CAediting_162912	chr2_26288089_+	SINE	Alu	AluJb
CAediting_162913	chr2_26288090_+	SINE	Alu	AluJb
CAediting_162914	chr2_26288091_+	SINE	Alu	AluJb
CAediting_162915	chr2_26288102_+	SINE	Alu	AluJb
CAediting_162916	chr2_26288105_+	SINE	Alu	AluJb
CAediting_162917	chr2_26288111_+	SINE	Alu	AluJb
CAediting_162918	chr2_26288114_+	SINE	Alu	AluJb
CAediting_162919	chr2_26288116_+	SINE	Alu	AluJb
CAediting_162920	chr2_26288120_+	SINE	Alu	AluJb
CAediting_162921	chr2_26288124_+	SINE	Alu	AluJb
CAediting_162922	chr2_26288128_+	SINE	Alu	AluJb
CAediting_162923	chr2_26288136_+	SINE	Alu	AluJb
CAediting_162924	chr2_26288160_+	SINE	Alu	AluJb
CAediting_162925	chr2_26288167_+	SINE	Alu	AluJb
CAediting_162926	chr2_26288174_+	SINE	Alu	AluJb
CAediting_162927	chr2_26288185_+	SINE	Alu	AluJb
CAediting_162928	chr2_26288216_+	SINE	Alu	AluJb
CAediting_162929	chr2_26288240_+	SINE	Alu	AluJb
CAediting_162930	chr2_26288431_+	SINE	Alu	AluJb
CAediting_162931	chr2_26288440_+	SINE	Alu	AluJb
CAediting_162932	chr2_26288453_+	SINE	Alu	AluJb
CAediting_162933	chr2_26288476_+	SINE	Alu	AluJb
CAediting_162934	chr2_26288484_+	SINE	Alu	AluJb
CAediting_162935	chr2_26288494_+	SINE	Alu	AluJb
CAediting_162936	chr2_26288499_+	SINE	Alu	AluJb
CAediting_162937	chr2_26288502_+	SINE	Alu	AluJb
CAediting_162938	chr2_26288525_+	SINE	Alu	AluJb
CAediting_162939	chr2_26288530_+	SINE	Alu	AluJb
CAediting_162940	chr2_26288531_+	SINE	Alu	AluJb
CAediting_162941	chr2_26288538_+	SINE	Alu	AluJb
CAediting_162942	chr2_26288544_+	SINE	Alu	AluJb
CAediting_162943	chr2_26288547_+	SINE	Alu	AluJb
CAediting_162944	chr2_26288562_+	SINE	Alu	AluJb
CAediting_162945	chr2_26288588_+	SINE	Alu	AluJb
CAediting_162946	chr2_26288594_+	SINE	Alu	AluJb
CAediting_162947	chr2_26288598_+	SINE	Alu	AluJb
CAediting_162948	chr2_26288617_+	SINE	Alu	AluJb
CAediting_162949	chr2_26288621_+	SINE	Alu	AluJb
CAediting_162950	chr2_26288624_+	SINE	Alu	AluJb
CAediting_162951	chr2_26288629_+	SINE	Alu	AluJb
CAediting_162952	chr2_26288637_+	SINE	Alu	AluJb
CAediting_162953	chr2_26288691_+	SINE	Alu	AluJb
CAediting_162954	chr2_26288697_+	SINE	Alu	AluJb
CAediting_162955	chr2_26288710_+	SINE	Alu	AluJb
CAediting_162956	chr2_26288978_+	SINE	Alu	AluY
CAediting_162957	chr2_26288996_+	SINE	Alu	AluY
CAediting_162958	chr2_26288997_+	SINE	Alu	AluY
CAediting_162959	chr2_26289004_+	SINE	Alu	AluY
CAediting_162960	chr2_26289012_+	SINE	Alu	AluY
CAediting_162961	chr2_26289028_+	SINE	Alu	AluY
CAediting_162962	chr2_26289039_+	SINE	Alu	AluY
CAediting_162963	chr2_26289063_+	SINE	Alu	AluY
CAediting_162964	chr2_26289065_+	SINE	Alu	AluY
CAediting_162965	chr2_26289071_+	SINE	Alu	AluY
CAediting_162966	chr2_26289073_+	SINE	Alu	AluY
CAediting_162967	chr2_26289084_+	SINE	Alu	AluY
CAediting_162968	chr2_26289093_+	SINE	Alu	AluY
CAediting_162969	chr2_26289103_+	SINE	Alu	AluY
CAediting_162970	chr2_26289129_+	SINE	Alu	AluY
CAediting_162971	chr2_26289135_+	SINE	Alu	AluY
CAediting_162972	chr2_26289139_+	SINE	Alu	AluY
CAediting_162973	chr2_26289170_+	SINE	Alu	AluY
CAediting_162974	chr2_26289171_+	SINE	Alu	AluY
CAediting_162975	chr2_26289826_+	SINE	MIR	MIRb

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RNA A-to-I editing events in the alternative splicing sites for HADHB

RNA A-to-I editing(s) in the alternative splicing sites.

AStype	CAeditomID	Editing position	AS position	AS direction	Exonic location	Wildtype sequence	Wildtype splicing strength	RNA edited sequence	RNA edited splicing strength
ES	CAediting_162793	chr2_26261592_+	26261591:26261599	5SS	2+0i	AAGGTAAAA	8.38	AGGGTAAAA	4.51
ES	CAediting_162794	chr2_26261596_+	26261591:26261599	5SS	0+3i	AAGGTAAAA	8.38	AAGGTGAAA	4.51
ES	CAediting_162795	chr2_26261599_+	26261591:26261599	5SS	0+6i	AAGGTAAAA	8.38	AAGGTAAAG	9.06

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000138029.12.HADHB.

Correlation between RNA A-to-I editing and PSI for ENSG00000138029.12.HADHB.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for HADHB

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for HADHB

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for HADHB

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for HADHB

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST	ENST type	RNA structure without RNA A-to-I editing.	RNA structure with RNA A-to-I editing.
ENST00000494615.1	processed_transcript

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID	ENST	Editing_Position	MFE_withoneAI	MFE_withoutAI	MFE_withmultipleAI
CAediting_162790	ENST00000494615.1	chr2_26260688_+	-839.90	-836.50	-846.60
CAediting_162791	ENST00000494615.1	chr2_26261541_+	-838.20	-836.50	-846.60
CAediting_162792	ENST00000494615.1	chr2_26261542_+	-836.40	-836.50	-846.60
CAediting_162793	ENST00000494615.1	chr2_26261592_+	-840.40	-836.50	-846.60

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Relation with ADAR for HADHB

Correlation between ADAR gene expression and RNA editing frequency

Cancer

CAeditomID

position

ADAR1 (p-val)

ADAR1 (coeff.)

ADAR2 (p-val)

ADAR2 (coeff.)

ADAR3 (p-val)

ADAR3 (coeff.)

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Relation with cancer stages for HADHB

Correlation between Cancer stages and RNA editing frequency

Cancer

Stage_type

CAeditomID

position

P-val

Coeff.

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Relation with survival for HADHB

Correlation between RNA editing and survival

Cancer

CAeditomID

position

KMpvalue

Coxpvalue

CoxHR

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RelatedDrugs for HADHB

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for HADHB

Diseases associated with this gene.
(DisGeNet 7.0)

Gene	Disease ID	Disease name	# pubmeds	Source
HADHB	C1969443	Trifunctional Protein Deficiency With Myopathy And Neuropathy	7	CLINGEN;CTD_human;GENOMICS_ENGLAND;ORPHANET;UNIPROT
HADHB	C0006142	Malignant neoplasm of breast	1	CTD_human;UNIPROT
HADHB	C0015695	Fatty Liver	1	CTD_human
HADHB	C0018799	Heart Diseases	1	CTD_human
HADHB	C0154251	Lipid Metabolism Disorders	1	CTD_human
HADHB	C0369183	Erythrocyte Mean Corpuscular Hemoglobin Test	1	GENOMICS_ENGLAND
HADHB	C0678222	Breast Carcinoma	1	CTD_human
HADHB	C1257931	Mammary Neoplasms, Human	1	CTD_human
HADHB	C1261502	Finding of Mean Corpuscular Hemoglobin	1	GENOMICS_ENGLAND
HADHB	C1458155	Mammary Neoplasms	1	CTD_human
HADHB	C2711227	Steatohepatitis	1	CTD_human
HADHB	C4704874	Mammary Carcinoma, Human	1	CTD_human

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene