Home

Download

Statistics

Examples

Help

Contact

Editing gene: DMGDH (CAeditome ID:29958)

Gene summary for DMGDH

Gene summary

Gene information	Gene symbol	DMGDH
	Gene ID	29958
	Gene name	dimethylglycine dehydrogenase
	Synonyms	DMGDHD\|ME2GLYDH
	Cytomap	5q14.1
	Type of gene	protein-coding
	Description	dimethylglycine dehydrogenase, mitochondrial
	Modification date	20210518
	UniProtAcc	Q9UI17
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene	GO ID	GO term	PubMed ID
DMGDH	GO:0005739	Dimethylglycine dehydrogenase, mitochondrial	0000052

Top

RNA A-to-I events for DMGDH

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000132837.13

RNA A-to-I editing events in Cancer.

CAediting_417040(78998733, -), CAediting_417041(79001273, -), CAediting_417042(79008126, -), CAediting_417043(79008128, -), CAediting_417044(79008134, -), CAediting_417045(79008186, -), CAediting_417046(79008187, -), CAediting_417047(79008188, -), CAediting_417048(79008191, -), CAediting_417049(79008197, -), CAediting_417050(79008234, -), CAediting_417051(79008241, -), CAediting_417052(79008296, -), CAediting_417053(79010475, -), CAediting_417054(79010588, -), CAediting_417055(79010606, -), CAediting_417056(79010610, -), CAediting_417057(79010634, -), CAediting_417058(79010636, -), CAediting_417059(79010639, -), CAediting_417060(79010643, -), CAediting_417061(79010644, -), CAediting_417062(79010646, -), CAediting_417063(79010648, -), CAediting_417064(79010649, -), CAediting_417065(79010650, -), CAediting_417066(79010675, -), CAediting_417067(79010710, -), CAediting_417068(79010711, -), CAediting_417069(79010742, -), CAediting_417070(79018077, -), CAediting_417071(79018086, -), CAediting_417072(79018100, -), CAediting_417073(79018120, -), CAediting_417074(79018124, -), CAediting_417075(79018131, -), CAediting_417076(79018132, -), CAediting_417077(79018137, -), CAediting_417078(79018145, -), CAediting_417079(79018156, -), CAediting_417080(79018159, -), CAediting_417081(79018163, -), CAediting_417082(79018171, -), CAediting_417083(79018176, -), CAediting_417084(79018180, -), CAediting_417085(79018186, -), CAediting_417086(79018216, -), CAediting_417087(79018222, -), CAediting_417088(79018240, -), CAediting_417089(79018242, -), CAediting_417090(79018244, -), CAediting_417091(79018254, -), CAediting_417092(79018257, -), CAediting_417093(79018258, -), CAediting_417094(79018259, -), CAediting_417095(79018282, -), CAediting_417096(79018303, -), CAediting_417097(79018306, -), CAediting_417098(79018311, -), CAediting_417099(79018312, -), CAediting_417100(79019628, -), CAediting_417101(79019634, -), CAediting_417102(79019640, -), CAediting_417103(79019641, -), CAediting_417104(79019750, -), CAediting_417105(79019760, -), CAediting_417106(79019761, -), CAediting_417107(79019763, -), CAediting_417108(79019773, -), CAediting_417109(79019798, -), CAediting_417110(79019802, -), CAediting_417111(79019803, -), CAediting_417112(79019822, -), CAediting_417113(79019823, -), CAediting_417114(79019825, -), CAediting_417115(79019828, -), CAediting_417116(79019838, -), CAediting_417117(79019883, -), CAediting_417118(79019887, -), CAediting_417119(79034419, -), CAediting_417120(79034439, -), CAediting_417121(79034443, -), CAediting_417122(79034444, -), CAediting_417123(79034445, -), CAediting_417124(79034446, -), CAediting_417125(79034467, -), CAediting_417126(79034474, -), CAediting_417127(79046211, -), CAediting_417128(79046243, -), CAediting_417129(79046359, -), CAediting_417130(79046363, -), CAediting_417131(79065349, -), CAediting_417132(79065430, -), CAediting_417133(79089701, -), CAediting_417134(79089722, -), CAediting_417135(79089796, -), CAediting_417136(79089823, -), CAediting_417137(79089868, -), CAediting_417138(79089892, -), CAediting_417139(79089911, -), CAediting_417140(79089942, -), CAediting_417141(79161639, -), CAediting_417142(79161655, -), CAediting_417143(79161659, -), CAediting_417144(79161674, -), CAediting_417145(79161691, -), CAediting_417146(79161723, -), CAediting_417147(79161727, -), CAediting_417148(79161741, -), CAediting_417149(79161742, -), CAediting_417150(79161745, -), CAediting_417151(79161779, -), CAediting_417152(79161825, -), CAediting_417153(79188013, -), CAediting_417154(79188017, -), CAediting_417155(79190863, -), CAediting_417156(79190894, -), CAediting_417157(79192453, -), CAediting_417158(79192496, -), CAediting_417159(79192500, -), CAediting_417160(79201935, -), CAediting_417161(79202499, -), CAediting_417162(79203470, -), CAediting_417163(79203701, -), CAediting_417164(79203702, -), CAediting_417165(79203710, -), CAediting_417166(79203848, -), CAediting_417167(79203858, -), CAediting_417168(79204346, -), CAediting_417169(79207475, -), CAediting_417170(79207480, -), CAediting_417171(79211352, -), CAediting_417172(79211358, -), CAediting_417173(79211364, -), CAediting_417174(79211374, -), CAediting_417175(79213528, -), CAediting_417176(79217469, -), CAediting_417177(79217477, -), CAediting_417178(79217583, -), CAediting_417179(79218073, -), CAediting_417180(79218596, -), CAediting_417181(79218719, -), CAediting_417182(79219088, -), CAediting_417183(79219091, -), CAediting_417184(79219102, -), CAediting_417185(79219103, -), CAediting_417186(79219122, -), CAediting_417187(79219134, -), CAediting_417188(79219143, -), CAediting_417189(79219144, -), CAediting_417190(79219170, -), CAediting_417191(79219175, -), CAediting_417192(79219178, -), CAediting_417193(79219236, -), CAediting_417194(79219483, -), CAediting_417195(79219636, -), CAediting_417196(79219660, -), CAediting_417197(79219677, -), CAediting_417198(79219678, -), CAediting_417199(79220353, -), CAediting_417200(79220667, -), CAediting_417201(79222348, -), CAediting_417202(79223736, -), CAediting_417203(79223741, -), CAediting_417204(79223767, -), CAediting_417205(79223770, -), CAediting_417206(79223809, -), CAediting_417207(79223811, -), CAediting_417208(79223821, -), CAediting_417209(79223824, -), CAediting_417210(79223825, -), CAediting_417211(79223833, -), CAediting_417212(79223850, -), CAediting_417213(79223881, -), CAediting_417214(79225696, -), CAediting_417215(79226918, -), CAediting_417216(79226958, -), CAediting_417217(79227008, -), CAediting_417218(79230810, -), CAediting_417219(79231449, -), CAediting_417220(79231591, -), CAediting_417221(79231812, -), CAediting_417222(79232898, -), CAediting_417223(79232901, -), CAediting_417224(79232905, -), CAediting_417225(79232912, -), CAediting_417226(79232918, -), CAediting_417227(79232927, -), CAediting_417228(79232979, -), CAediting_417229(79233012, -), CAediting_417230(79233042, -), CAediting_417231(79233043, -), CAediting_417232(79234318, -), CAediting_417233(79234367, -), CAediting_417234(79234739, -), CAediting_417235(79235028, -),

Top

RNA editing positional annotations for DMGDH using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_417040	chr5_78998733_-	intronic
CAediting_417041	chr5_79001273_-	intronic
CAediting_417042	chr5_79008126_-	intronic
CAediting_417043	chr5_79008128_-	intronic
CAediting_417044	chr5_79008134_-	intronic
CAediting_417045	chr5_79008186_-	intronic
CAediting_417046	chr5_79008187_-	intronic
CAediting_417047	chr5_79008188_-	intronic
CAediting_417048	chr5_79008191_-	intronic
CAediting_417049	chr5_79008197_-	intronic
CAediting_417050	chr5_79008234_-	intronic
CAediting_417051	chr5_79008241_-	intronic
CAediting_417052	chr5_79008296_-	intronic
CAediting_417053	chr5_79010475_-	intronic
CAediting_417054	chr5_79010588_-	intronic
CAediting_417055	chr5_79010606_-	intronic
CAediting_417056	chr5_79010610_-	intronic
CAediting_417057	chr5_79010634_-	intronic
CAediting_417058	chr5_79010636_-	intronic
CAediting_417059	chr5_79010639_-	intronic
CAediting_417060	chr5_79010643_-	intronic
CAediting_417061	chr5_79010644_-	intronic
CAediting_417062	chr5_79010646_-	intronic
CAediting_417063	chr5_79010648_-	intronic
CAediting_417064	chr5_79010649_-	intronic
CAediting_417065	chr5_79010650_-	intronic
CAediting_417066	chr5_79010675_-	intronic
CAediting_417067	chr5_79010710_-	intronic
CAediting_417068	chr5_79010711_-	intronic
CAediting_417069	chr5_79010742_-	intronic
CAediting_417070	chr5_79018077_-	intronic
CAediting_417071	chr5_79018086_-	intronic
CAediting_417072	chr5_79018100_-	intronic
CAediting_417073	chr5_79018120_-	intronic
CAediting_417074	chr5_79018124_-	intronic
CAediting_417075	chr5_79018131_-	intronic
CAediting_417076	chr5_79018132_-	intronic
CAediting_417077	chr5_79018137_-	intronic
CAediting_417078	chr5_79018145_-	intronic
CAediting_417079	chr5_79018156_-	intronic
CAediting_417080	chr5_79018159_-	intronic
CAediting_417081	chr5_79018163_-	intronic
CAediting_417082	chr5_79018171_-	intronic
CAediting_417083	chr5_79018176_-	intronic
CAediting_417084	chr5_79018180_-	intronic
CAediting_417085	chr5_79018186_-	intronic
CAediting_417086	chr5_79018216_-	intronic
CAediting_417087	chr5_79018222_-	intronic
CAediting_417088	chr5_79018240_-	intronic
CAediting_417089	chr5_79018242_-	intronic
CAediting_417090	chr5_79018244_-	intronic
CAediting_417091	chr5_79018254_-	intronic
CAediting_417092	chr5_79018257_-	intronic
CAediting_417093	chr5_79018258_-	intronic
CAediting_417094	chr5_79018259_-	intronic
CAediting_417095	chr5_79018282_-	intronic
CAediting_417096	chr5_79018303_-	intronic
CAediting_417097	chr5_79018306_-	intronic
CAediting_417098	chr5_79018311_-	intronic
CAediting_417099	chr5_79018312_-	intronic
CAediting_417100	chr5_79019628_-	intronic
CAediting_417101	chr5_79019634_-	intronic
CAediting_417102	chr5_79019640_-	intronic
CAediting_417103	chr5_79019641_-	intronic
CAediting_417104	chr5_79019750_-	intronic
CAediting_417105	chr5_79019760_-	intronic
CAediting_417106	chr5_79019761_-	intronic
CAediting_417107	chr5_79019763_-	intronic
CAediting_417108	chr5_79019773_-	intronic
CAediting_417109	chr5_79019798_-	intronic
CAediting_417110	chr5_79019802_-	intronic
CAediting_417111	chr5_79019803_-	intronic
CAediting_417112	chr5_79019822_-	intronic
CAediting_417113	chr5_79019823_-	intronic
CAediting_417114	chr5_79019825_-	intronic
CAediting_417115	chr5_79019828_-	intronic
CAediting_417116	chr5_79019838_-	intronic
CAediting_417117	chr5_79019883_-	intronic
CAediting_417118	chr5_79019887_-	intronic
CAediting_417119	chr5_79034419_-	intronic
CAediting_417120	chr5_79034439_-	intronic
CAediting_417121	chr5_79034443_-	intronic
CAediting_417122	chr5_79034444_-	intronic
CAediting_417123	chr5_79034445_-	intronic
CAediting_417124	chr5_79034446_-	intronic
CAediting_417125	chr5_79034467_-	intronic
CAediting_417126	chr5_79034474_-	intronic
CAediting_417127	chr5_79046211_-	intronic
CAediting_417128	chr5_79046243_-	intronic
CAediting_417129	chr5_79046359_-	intronic
CAediting_417130	chr5_79046363_-	intronic
CAediting_417131	chr5_79065349_-	ncRNA_intronic
CAediting_417132	chr5_79065430_-	ncRNA_intronic
CAediting_417133	chr5_79089701_-	ncRNA_intronic
CAediting_417134	chr5_79089722_-	ncRNA_intronic
CAediting_417135	chr5_79089796_-	ncRNA_intronic
CAediting_417136	chr5_79089823_-	ncRNA_intronic
CAediting_417137	chr5_79089868_-	ncRNA_intronic
CAediting_417138	chr5_79089892_-	ncRNA_intronic
CAediting_417139	chr5_79089911_-	ncRNA_intronic
CAediting_417140	chr5_79089942_-	ncRNA_intronic
CAediting_417141	chr5_79161639_-	ncRNA_intronic
CAediting_417142	chr5_79161655_-	ncRNA_intronic
CAediting_417143	chr5_79161659_-	ncRNA_intronic
CAediting_417144	chr5_79161674_-	ncRNA_intronic
CAediting_417145	chr5_79161691_-	ncRNA_intronic
CAediting_417146	chr5_79161723_-	ncRNA_intronic
CAediting_417147	chr5_79161727_-	ncRNA_intronic
CAediting_417148	chr5_79161741_-	ncRNA_intronic
CAediting_417149	chr5_79161742_-	ncRNA_intronic
CAediting_417150	chr5_79161745_-	ncRNA_intronic
CAediting_417151	chr5_79161779_-	ncRNA_intronic
CAediting_417152	chr5_79161825_-	ncRNA_intronic
CAediting_417153	chr5_79188013_-	ncRNA_intronic
CAediting_417154	chr5_79188017_-	ncRNA_intronic
CAediting_417155	chr5_79190863_-	ncRNA_intronic
CAediting_417156	chr5_79190894_-	ncRNA_intronic
CAediting_417157	chr5_79192453_-	ncRNA_intronic
CAediting_417158	chr5_79192496_-	ncRNA_intronic
CAediting_417159	chr5_79192500_-	ncRNA_intronic
CAediting_417160	chr5_79201935_-	ncRNA_intronic
CAediting_417161	chr5_79202499_-	ncRNA_intronic
CAediting_417162	chr5_79203470_-	ncRNA_intronic
CAediting_417163	chr5_79203701_-	ncRNA_intronic
CAediting_417164	chr5_79203702_-	ncRNA_intronic
CAediting_417165	chr5_79203710_-	ncRNA_intronic
CAediting_417166	chr5_79203848_-	ncRNA_intronic
CAediting_417167	chr5_79203858_-	ncRNA_intronic
CAediting_417168	chr5_79204346_-	ncRNA_intronic
CAediting_417169	chr5_79207475_-	ncRNA_intronic
CAediting_417170	chr5_79207480_-	ncRNA_intronic
CAediting_417171	chr5_79211352_-	ncRNA_intronic
CAediting_417172	chr5_79211358_-	ncRNA_intronic
CAediting_417173	chr5_79211364_-	ncRNA_intronic
CAediting_417174	chr5_79211374_-	ncRNA_intronic
CAediting_417175	chr5_79213528_-	ncRNA_intronic
CAediting_417176	chr5_79217469_-	ncRNA_intronic
CAediting_417177	chr5_79217477_-	ncRNA_intronic
CAediting_417178	chr5_79217583_-	ncRNA_intronic
CAediting_417179	chr5_79218073_-	ncRNA_intronic
CAediting_417180	chr5_79218596_-	ncRNA_intronic
CAediting_417181	chr5_79218719_-	ncRNA_intronic
CAediting_417182	chr5_79219088_-	ncRNA_intronic
CAediting_417183	chr5_79219091_-	ncRNA_intronic
CAediting_417184	chr5_79219102_-	ncRNA_intronic
CAediting_417185	chr5_79219103_-	ncRNA_intronic
CAediting_417186	chr5_79219122_-	ncRNA_intronic
CAediting_417187	chr5_79219134_-	ncRNA_intronic
CAediting_417188	chr5_79219143_-	ncRNA_intronic
CAediting_417189	chr5_79219144_-	ncRNA_intronic
CAediting_417190	chr5_79219170_-	ncRNA_intronic
CAediting_417191	chr5_79219175_-	ncRNA_intronic
CAediting_417192	chr5_79219178_-	ncRNA_intronic
CAediting_417193	chr5_79219236_-	ncRNA_intronic
CAediting_417194	chr5_79219483_-	ncRNA_intronic
CAediting_417195	chr5_79219636_-	ncRNA_intronic
CAediting_417196	chr5_79219660_-	ncRNA_intronic
CAediting_417197	chr5_79219677_-	ncRNA_intronic
CAediting_417198	chr5_79219678_-	ncRNA_intronic
CAediting_417199	chr5_79220353_-	ncRNA_intronic
CAediting_417200	chr5_79220667_-	ncRNA_intronic
CAediting_417201	chr5_79222348_-	ncRNA_exonic
CAediting_417202	chr5_79223736_-	ncRNA_intronic
CAediting_417203	chr5_79223741_-	ncRNA_intronic
CAediting_417204	chr5_79223767_-	ncRNA_intronic
CAediting_417205	chr5_79223770_-	ncRNA_intronic
CAediting_417206	chr5_79223809_-	ncRNA_exonic
CAediting_417207	chr5_79223811_-	ncRNA_exonic
CAediting_417208	chr5_79223821_-	ncRNA_exonic
CAediting_417209	chr5_79223824_-	ncRNA_exonic
CAediting_417210	chr5_79223825_-	ncRNA_exonic
CAediting_417211	chr5_79223833_-	ncRNA_exonic
CAediting_417212	chr5_79223850_-	ncRNA_exonic
CAediting_417213	chr5_79223881_-	ncRNA_exonic
CAediting_417214	chr5_79225696_-	ncRNA_intronic
CAediting_417215	chr5_79226918_-	ncRNA_intronic
CAediting_417216	chr5_79226958_-	ncRNA_intronic
CAediting_417217	chr5_79227008_-	ncRNA_intronic
CAediting_417218	chr5_79230810_-	ncRNA_intronic
CAediting_417219	chr5_79231449_-	ncRNA_intronic
CAediting_417220	chr5_79231591_-	ncRNA_intronic
CAediting_417221	chr5_79231812_-	ncRNA_intronic
CAediting_417222	chr5_79232898_-	ncRNA_intronic
CAediting_417223	chr5_79232901_-	ncRNA_intronic
CAediting_417224	chr5_79232905_-	ncRNA_intronic
CAediting_417225	chr5_79232912_-	ncRNA_intronic
CAediting_417226	chr5_79232918_-	ncRNA_intronic
CAediting_417227	chr5_79232927_-	ncRNA_intronic
CAediting_417228	chr5_79232979_-	ncRNA_intronic
CAediting_417229	chr5_79233012_-	ncRNA_intronic
CAediting_417230	chr5_79233042_-	ncRNA_intronic
CAediting_417231	chr5_79233043_-	ncRNA_intronic
CAediting_417232	chr5_79234318_-	ncRNA_intronic
CAediting_417233	chr5_79234367_-	ncRNA_intronic
CAediting_417234	chr5_79234739_-	ncRNA_intronic
CAediting_417235	chr5_79235028_-	ncRNA_intronic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_417040	chr5_78998733_-	SINE	Alu	AluSx1
CAediting_417041	chr5_79001273_-	SINE	Alu	AluSz
CAediting_417054	chr5_79010588_-	LINE	L2	L2b
CAediting_417055	chr5_79010606_-	LINE	L2	L2b
CAediting_417056	chr5_79010610_-	LINE	L2	L2b
CAediting_417057	chr5_79010634_-	LINE	L2	L2b
CAediting_417058	chr5_79010636_-	LINE	L2	L2b
CAediting_417059	chr5_79010639_-	LINE	L2	L2b
CAediting_417060	chr5_79010643_-	LINE	L2	L2b
CAediting_417061	chr5_79010644_-	LINE	L2	L2b
CAediting_417062	chr5_79010646_-	LINE	L2	L2b
CAediting_417063	chr5_79010648_-	LINE	L2	L2b
CAediting_417064	chr5_79010649_-	LINE	L2	L2b
CAediting_417065	chr5_79010650_-	LINE	L2	L2b
CAediting_417070	chr5_79018077_-	SINE	Alu	AluJb
CAediting_417071	chr5_79018086_-	SINE	Alu	AluJb
CAediting_417072	chr5_79018100_-	SINE	Alu	AluJb
CAediting_417073	chr5_79018120_-	SINE	Alu	AluJb
CAediting_417074	chr5_79018124_-	SINE	Alu	AluJb
CAediting_417075	chr5_79018131_-	SINE	Alu	AluJb
CAediting_417076	chr5_79018132_-	SINE	Alu	AluJb
CAediting_417077	chr5_79018137_-	SINE	Alu	AluJb
CAediting_417078	chr5_79018145_-	SINE	Alu	AluJb
CAediting_417079	chr5_79018156_-	SINE	Alu	AluJb
CAediting_417080	chr5_79018159_-	SINE	Alu	AluJb
CAediting_417081	chr5_79018163_-	SINE	Alu	AluJb
CAediting_417082	chr5_79018171_-	SINE	Alu	AluJb
CAediting_417083	chr5_79018176_-	SINE	Alu	AluJb
CAediting_417084	chr5_79018180_-	SINE	Alu	AluJb
CAediting_417085	chr5_79018186_-	SINE	Alu	AluJb
CAediting_417086	chr5_79018216_-	SINE	Alu	AluJb
CAediting_417087	chr5_79018222_-	SINE	Alu	AluJb
CAediting_417088	chr5_79018240_-	SINE	Alu	AluJb
CAediting_417089	chr5_79018242_-	SINE	Alu	AluJb
CAediting_417090	chr5_79018244_-	SINE	Alu	AluJb
CAediting_417091	chr5_79018254_-	SINE	Alu	AluJb
CAediting_417092	chr5_79018257_-	SINE	Alu	AluJb
CAediting_417093	chr5_79018258_-	SINE	Alu	AluJb
CAediting_417094	chr5_79018259_-	SINE	Alu	AluJb
CAediting_417095	chr5_79018282_-	SINE	Alu	AluJb
CAediting_417096	chr5_79018303_-	SINE	Alu	AluJb
CAediting_417097	chr5_79018306_-	SINE	Alu	AluJb
CAediting_417098	chr5_79018311_-	SINE	Alu	AluJb
CAediting_417099	chr5_79018312_-	SINE	Alu	AluJb
CAediting_417100	chr5_79019628_-	SINE	Alu	AluSx1
CAediting_417101	chr5_79019634_-	SINE	Alu	AluSx1
CAediting_417102	chr5_79019640_-	SINE	Alu	AluSx1
CAediting_417103	chr5_79019641_-	SINE	Alu	AluSx1
CAediting_417104	chr5_79019750_-	SINE	Alu	AluSx1
CAediting_417105	chr5_79019760_-	SINE	Alu	AluSx1
CAediting_417106	chr5_79019761_-	SINE	Alu	AluSx1
CAediting_417107	chr5_79019763_-	SINE	Alu	AluSx1
CAediting_417108	chr5_79019773_-	SINE	Alu	AluSx1
CAediting_417109	chr5_79019798_-	SINE	Alu	AluSx1
CAediting_417110	chr5_79019802_-	SINE	Alu	AluSx1
CAediting_417111	chr5_79019803_-	SINE	Alu	AluSx1
CAediting_417112	chr5_79019822_-	SINE	Alu	AluSx1
CAediting_417113	chr5_79019823_-	SINE	Alu	AluSx1
CAediting_417114	chr5_79019825_-	SINE	Alu	AluSx1
CAediting_417115	chr5_79019828_-	SINE	Alu	AluSx1
CAediting_417116	chr5_79019838_-	SINE	Alu	AluSx1
CAediting_417117	chr5_79019883_-	SINE	Alu	AluSx1
CAediting_417118	chr5_79019887_-	SINE	Alu	AluSx1
CAediting_417127	chr5_79046211_-	SINE	Alu	AluSx1
CAediting_417128	chr5_79046243_-	SINE	Alu	AluSx1
CAediting_417129	chr5_79046359_-	SINE	Alu	AluSx1
CAediting_417130	chr5_79046363_-	SINE	Alu	AluSx1
CAediting_417131	chr5_79065349_-	SINE	Alu	AluSz
CAediting_417132	chr5_79065430_-	SINE	Alu	AluSz
CAediting_417133	chr5_79089701_-	SINE	Alu	AluSz6
CAediting_417134	chr5_79089722_-	SINE	Alu	AluSz6
CAediting_417135	chr5_79089796_-	SINE	Alu	AluSz6
CAediting_417136	chr5_79089823_-	SINE	Alu	AluSz6
CAediting_417137	chr5_79089868_-	SINE	Alu	AluSz6
CAediting_417138	chr5_79089892_-	SINE	Alu	AluSz6
CAediting_417139	chr5_79089911_-	SINE	Alu	AluSz6
CAediting_417140	chr5_79089942_-	SINE	Alu	AluSz6
CAediting_417141	chr5_79161639_-	SINE	Alu	AluSx1
CAediting_417142	chr5_79161655_-	SINE	Alu	AluSx1
CAediting_417143	chr5_79161659_-	SINE	Alu	AluSx1
CAediting_417144	chr5_79161674_-	SINE	Alu	AluSx1
CAediting_417145	chr5_79161691_-	SINE	Alu	AluSx1
CAediting_417146	chr5_79161723_-	SINE	Alu	AluSx1
CAediting_417147	chr5_79161727_-	SINE	Alu	AluSx1
CAediting_417148	chr5_79161741_-	SINE	Alu	AluSx1
CAediting_417149	chr5_79161742_-	SINE	Alu	AluSx1
CAediting_417150	chr5_79161745_-	SINE	Alu	AluSx1
CAediting_417151	chr5_79161779_-	SINE	Alu	AluSx1
CAediting_417152	chr5_79161825_-	SINE	Alu	AluSx1
CAediting_417153	chr5_79188013_-	SINE	Alu	AluSx1
CAediting_417154	chr5_79188017_-	SINE	Alu	AluSx1
CAediting_417155	chr5_79190863_-	SINE	Alu	AluY
CAediting_417156	chr5_79190894_-	SINE	Alu	AluY
CAediting_417157	chr5_79192453_-	SINE	Alu	AluSp
CAediting_417158	chr5_79192496_-	SINE	Alu	AluSp
CAediting_417159	chr5_79192500_-	SINE	Alu	AluSp
CAediting_417160	chr5_79201935_-	SINE	Alu	AluSx
CAediting_417161	chr5_79202499_-	SINE	Alu	FLAM_C
CAediting_417162	chr5_79203470_-	SINE	Alu	AluJb
CAediting_417163	chr5_79203701_-	SINE	Alu	AluSq2
CAediting_417164	chr5_79203702_-	SINE	Alu	AluSq2
CAediting_417165	chr5_79203710_-	SINE	Alu	AluSq2
CAediting_417166	chr5_79203848_-	SINE	Alu	AluSq2
CAediting_417167	chr5_79203858_-	SINE	Alu	AluSq2
CAediting_417168	chr5_79204346_-	SINE	Alu	AluSx4
CAediting_417169	chr5_79207475_-	SINE	Alu	AluSz
CAediting_417170	chr5_79207480_-	SINE	Alu	AluSz
CAediting_417171	chr5_79211352_-	SINE	Alu	AluSz6
CAediting_417172	chr5_79211358_-	SINE	Alu	AluSz6
CAediting_417173	chr5_79211364_-	SINE	Alu	AluSz6
CAediting_417174	chr5_79211374_-	SINE	Alu	AluSz6
CAediting_417175	chr5_79213528_-	SINE	Alu	AluSz
CAediting_417176	chr5_79217469_-	SINE	Alu	AluSg
CAediting_417177	chr5_79217477_-	SINE	Alu	AluSg
CAediting_417178	chr5_79217583_-	SINE	Alu	AluSg
CAediting_417179	chr5_79218073_-	SINE	Alu	AluSx1
CAediting_417180	chr5_79218596_-	SINE	Alu	AluSx1
CAediting_417181	chr5_79218719_-	SINE	Alu	AluJr
CAediting_417182	chr5_79219088_-	SINE	Alu	AluSp
CAediting_417183	chr5_79219091_-	SINE	Alu	AluSp
CAediting_417184	chr5_79219102_-	SINE	Alu	AluSp
CAediting_417185	chr5_79219103_-	SINE	Alu	AluSp
CAediting_417186	chr5_79219122_-	SINE	Alu	AluSp
CAediting_417187	chr5_79219134_-	SINE	Alu	AluSp
CAediting_417188	chr5_79219143_-	SINE	Alu	AluSp
CAediting_417189	chr5_79219144_-	SINE	Alu	AluSp
CAediting_417190	chr5_79219170_-	SINE	Alu	AluSp
CAediting_417191	chr5_79219175_-	SINE	Alu	AluSp
CAediting_417192	chr5_79219178_-	SINE	Alu	AluSp
CAediting_417193	chr5_79219236_-	SINE	Alu	AluSp
CAediting_417194	chr5_79219483_-	SINE	Alu	AluSz6
CAediting_417195	chr5_79219636_-	SINE	Alu	AluSx1
CAediting_417196	chr5_79219660_-	SINE	Alu	AluSx1
CAediting_417197	chr5_79219677_-	SINE	Alu	AluSx1
CAediting_417198	chr5_79219678_-	SINE	Alu	AluSx1
CAediting_417199	chr5_79220353_-	SINE	Alu	AluSx3
CAediting_417200	chr5_79220667_-	SINE	Alu	FLAM_C
CAediting_417201	chr5_79222348_-	SINE	Alu	AluJb
CAediting_417202	chr5_79223736_-	SINE	Alu	AluSx1
CAediting_417203	chr5_79223741_-	SINE	Alu	AluSx1
CAediting_417204	chr5_79223767_-	SINE	Alu	AluSx1
CAediting_417205	chr5_79223770_-	SINE	Alu	AluSx1
CAediting_417206	chr5_79223809_-	SINE	Alu	AluSx1
CAediting_417207	chr5_79223811_-	SINE	Alu	AluSx1
CAediting_417208	chr5_79223821_-	SINE	Alu	AluSx1
CAediting_417209	chr5_79223824_-	SINE	Alu	AluSx1
CAediting_417210	chr5_79223825_-	SINE	Alu	AluSx1
CAediting_417211	chr5_79223833_-	SINE	Alu	AluSx1
CAediting_417212	chr5_79223850_-	SINE	Alu	AluSx1
CAediting_417213	chr5_79223881_-	SINE	Alu	AluSx1
CAediting_417214	chr5_79225696_-	SINE	Alu	AluJb
CAediting_417215	chr5_79226918_-	SINE	Alu	AluJb
CAediting_417216	chr5_79226958_-	SINE	Alu	AluJb
CAediting_417217	chr5_79227008_-	SINE	Alu	AluJb
CAediting_417218	chr5_79230810_-	SINE	Alu	AluJo
CAediting_417219	chr5_79231449_-	SINE	Alu	AluSp
CAediting_417220	chr5_79231591_-	SINE	Alu	AluSp
CAediting_417221	chr5_79231812_-	SINE	Alu	AluSz
CAediting_417222	chr5_79232898_-	SINE	Alu	AluSx1
CAediting_417223	chr5_79232901_-	SINE	Alu	AluSx1
CAediting_417224	chr5_79232905_-	SINE	Alu	AluSx1
CAediting_417225	chr5_79232912_-	SINE	Alu	AluSx1
CAediting_417226	chr5_79232918_-	SINE	Alu	AluSx1
CAediting_417227	chr5_79232927_-	SINE	Alu	AluSx1
CAediting_417228	chr5_79232979_-	SINE	Alu	AluSx1
CAediting_417229	chr5_79233012_-	SINE	Alu	AluSx1
CAediting_417230	chr5_79233042_-	SINE	Alu	AluSx1
CAediting_417231	chr5_79233043_-	SINE	Alu	AluSx1
CAediting_417232	chr5_79234318_-	SINE	Alu	AluSz
CAediting_417233	chr5_79234367_-	SINE	Alu	AluSz
CAediting_417234	chr5_79234739_-	SINE	Alu	AluSx

Top

RNA A-to-I editing events in the alternative splicing sites for DMGDH

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000132837.13.DMGDH.

Correlation between RNA A-to-I editing and PSI for ENSG00000132837.13.DMGDH.

Top

Differntial gene expression between RNA A-to-I edited versus non-edited samples for DMGDH

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

KIRC.CAediting_417085.ENSG00000132837.DMGDH.png
Soverview

KIRP.CAediting_417085.ENSG00000132837.DMGDH.png
Soverview

KIRP.CAediting_417092.ENSG00000132837.DMGDH.png
Soverview

LIHC.CAediting_417092.ENSG00000132837.DMGDH.png
Soverview

Top

Protein coding region RNA A-to-I editings for DMGDH

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

Top

The effects of the RNA editing to the miRNA binding sites for DMGDH

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1054808	chr15_66496985_-	ENSG00000132837.13	ENST00000518477	hsa-miR-4512	79042322	79042328	7mer-1a	79042322	79042343	151	-24.67

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_468389	chr6_31355314_-	ENSG00000132837.13	ENST00000523732	hsa-miR-6891-5p	79021470	79021476	7mer-m8	79021469	79021489	150	-17.09
CAediting_468389	chr6_31355314_-	ENSG00000132837.13	ENST00000523732	hsa-miR-6891-5p	79020736	79020741	6mer	79020735	79020753	149	-25.63

Differentially expressed gene-miRNA network

Top

The effects of the RNA editing to the stability of the RNA structures for DMGDH

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST	ENST type	RNA structure without RNA A-to-I editing.	RNA structure with RNA A-to-I editing.
ENST00000520855.1	processed_transcript

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID	ENST	Editing_Position	MFE_withoneAI	MFE_withoutAI	MFE_withmultipleAI
CAediting_417201	ENST00000520855.1	chr5_79222348_-	-204.20	-198.80	-219.10
CAediting_417206	ENST00000520855.1	chr5_79223809_-	-200.30	-198.80	-219.10
CAediting_417207	ENST00000520855.1	chr5_79223811_-	-201.30	-198.80	-219.10
CAediting_417208	ENST00000520855.1	chr5_79223821_-	-199.60	-198.80	-219.10
CAediting_417209	ENST00000520855.1	chr5_79223824_-	-202.40	-198.80	-219.10
CAediting_417210	ENST00000520855.1	chr5_79223825_-	-200.10	-198.80	-219.10
CAediting_417211	ENST00000520855.1	chr5_79223833_-	-199.00	-198.80	-219.10
CAediting_417212	ENST00000520855.1	chr5_79223850_-	-201.10	-198.80	-219.10
CAediting_417213	ENST00000520855.1	chr5_79223881_-	-199.70	-198.80	-219.10

Top

Relation with ADAR for DMGDH

Correlation between ADAR gene expression and RNA editing frequency

Cancer	CAeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
LIHC	CAediting_417074	chr5_79018124_-	.	.	.	.	0.049239613014787	0.276821940464899
KIRC	CAediting_417092	chr5_79018257_-	0.0290015893875484	0.13896069597506	.	.	.	.
KIRC	CAediting_417105	chr5_79019760_-	0.0196933264297553	0.160084131453771	.	.	.	.
KIRC	CAediting_417114	chr5_79019825_-	.	.	0.00720005398647012	0.257226232383855	.	.

Top

Relation with cancer stages for DMGDH

Correlation between Cancer stages and RNA editing frequency

Cancer

Stage_type

CAeditomID

position

P-val

Coeff.

Top

Relation with survival for DMGDH

Correlation between RNA editing and survival

Cancer

CAeditomID

position

KMpvalue

Coxpvalue

CoxHR

Top

RelatedDrugs for DMGDH

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

Top

RelatedDiseases for DMGDH

Diseases associated with this gene.
(DisGeNet 7.0)

Gene	Disease ID	Disease name	# pubmeds	Source
DMGDH	C1853892	Dimethylglycine Dehydrogenase Deficiency	5	CLINGEN;CTD_human;GENOMICS_ENGLAND;ORPHANET;UNIPROT

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene