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Editing gene: ST8SIA5 (CAeditome ID:29906)

Gene summary for ST8SIA5

Gene summary

Gene information	Gene symbol	ST8SIA5
	Gene ID	29906
	Gene name	ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5
	Synonyms	SIAT8-E\|SIAT8E\|ST8SiaV
	Cytomap	18q21.1
	Type of gene	protein-coding
	Description	alpha-2,8-sialyltransferase 8EST8 alpha-N-acetylneuraminate alpha-2,8-sialyltransferase 5sialyltransferase 8E (alpha-2, 8-polysialytransferase)sialyltransferase St8Sia V
	Modification date	20210518
	UniProtAcc	O15466
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene

GO ID

GO term

PubMed ID

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RNA A-to-I events for ST8SIA5

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000101638.12

RNA A-to-I editing events in Cancer.

CAediting_1263127(46669815, -), CAediting_1263128(46669827, -), CAediting_1263129(46669842, -), CAediting_1263130(46669878, -), CAediting_1263131(46669969, -), CAediting_1263132(46669986, -), CAediting_1263133(46669993, -), CAediting_1263134(46670006, -), CAediting_1263135(46670012, -), CAediting_1263136(46670025, -), CAediting_1263137(46670031, -), CAediting_1263138(46670067, -), CAediting_1263139(46670446, -), CAediting_1263140(46670463, -), CAediting_1263141(46670477, -), CAediting_1263142(46670502, -), CAediting_1263143(46670508, -), CAediting_1263144(46670510, -), CAediting_1263145(46670520, -), CAediting_1263146(46670524, -), CAediting_1263147(46670533, -), CAediting_1263148(46670540, -), CAediting_1263149(46670556, -), CAediting_1263150(46670571, -), CAediting_1263151(46670572, -), CAediting_1263152(46670576, -), CAediting_1263153(46670580, -), CAediting_1263154(46670586, -), CAediting_1263155(46670590, -), CAediting_1263156(46670646, -), CAediting_1263157(46670659, -), CAediting_1263158(46670660, -), CAediting_1263159(46670688, -), CAediting_1263160(46670699, -), CAediting_1263161(46670704, -), CAediting_1263162(46670705, -), CAediting_1263163(46670713, -), CAediting_1263164(46673595, -), CAediting_1263165(46673633, -), CAediting_1263166(46673636, -), CAediting_1263167(46673651, -), CAediting_1263168(46673652, -), CAediting_1263169(46673660, -), CAediting_1263170(46673665, -), CAediting_1263171(46673667, -), CAediting_1263172(46673673, -), CAediting_1263173(46673675, -), CAediting_1263174(46673678, -), CAediting_1263175(46673735, -), CAediting_1263176(46673744, -), CAediting_1263177(46673749, -), CAediting_1263178(46673767, -), CAediting_1263179(46673768, -), CAediting_1263180(46673770, -), CAediting_1263181(46673783, -), CAediting_1263182(46673912, -), CAediting_1263183(46673946, -), CAediting_1263184(46675805, -), CAediting_1263185(46675806, -), CAediting_1263186(46675853, -), CAediting_1263187(46675881, -), CAediting_1263188(46675941, -), CAediting_1263189(46675974, -), CAediting_1263190(46675994, -), CAediting_1263191(46676025, -), CAediting_1263192(46676048, -), CAediting_1263193(46676050, -), CAediting_1263194(46676052, -), CAediting_1263195(46701217, -), CAediting_1263196(46719874, -), CAediting_1263197(46719942, -), CAediting_1263198(46719952, -), CAediting_1263199(46748469, -),

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RNA editing positional annotations for ST8SIA5 using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_1263127	chr18_46669815_-	UTR3
CAediting_1263128	chr18_46669827_-	UTR3
CAediting_1263129	chr18_46669842_-	UTR3
CAediting_1263130	chr18_46669878_-	UTR3
CAediting_1263131	chr18_46669969_-	UTR3
CAediting_1263132	chr18_46669986_-	UTR3
CAediting_1263133	chr18_46669993_-	UTR3
CAediting_1263134	chr18_46670006_-	UTR3
CAediting_1263135	chr18_46670012_-	UTR3
CAediting_1263136	chr18_46670025_-	UTR3
CAediting_1263137	chr18_46670031_-	UTR3
CAediting_1263138	chr18_46670067_-	UTR3
CAediting_1263139	chr18_46670446_-	UTR3
CAediting_1263140	chr18_46670463_-	UTR3
CAediting_1263141	chr18_46670477_-	UTR3
CAediting_1263142	chr18_46670502_-	UTR3
CAediting_1263143	chr18_46670508_-	UTR3
CAediting_1263144	chr18_46670510_-	UTR3
CAediting_1263145	chr18_46670520_-	UTR3
CAediting_1263146	chr18_46670524_-	UTR3
CAediting_1263147	chr18_46670533_-	UTR3
CAediting_1263148	chr18_46670540_-	UTR3
CAediting_1263149	chr18_46670556_-	UTR3
CAediting_1263150	chr18_46670571_-	UTR3
CAediting_1263151	chr18_46670572_-	UTR3
CAediting_1263152	chr18_46670576_-	UTR3
CAediting_1263153	chr18_46670580_-	UTR3
CAediting_1263154	chr18_46670586_-	UTR3
CAediting_1263155	chr18_46670590_-	UTR3
CAediting_1263156	chr18_46670646_-	UTR3
CAediting_1263157	chr18_46670659_-	UTR3
CAediting_1263158	chr18_46670660_-	UTR3
CAediting_1263159	chr18_46670688_-	UTR3
CAediting_1263160	chr18_46670699_-	UTR3
CAediting_1263161	chr18_46670704_-	UTR3
CAediting_1263162	chr18_46670705_-	UTR3
CAediting_1263163	chr18_46670713_-	UTR3
CAediting_1263164	chr18_46673595_-	UTR3
CAediting_1263165	chr18_46673633_-	UTR3
CAediting_1263166	chr18_46673636_-	UTR3
CAediting_1263167	chr18_46673651_-	UTR3
CAediting_1263168	chr18_46673652_-	UTR3
CAediting_1263169	chr18_46673660_-	UTR3
CAediting_1263170	chr18_46673665_-	UTR3
CAediting_1263171	chr18_46673667_-	UTR3
CAediting_1263172	chr18_46673673_-	UTR3
CAediting_1263173	chr18_46673675_-	UTR3
CAediting_1263174	chr18_46673678_-	UTR3
CAediting_1263175	chr18_46673735_-	UTR3
CAediting_1263176	chr18_46673744_-	UTR3
CAediting_1263177	chr18_46673749_-	UTR3
CAediting_1263178	chr18_46673767_-	UTR3
CAediting_1263179	chr18_46673768_-	UTR3
CAediting_1263180	chr18_46673770_-	UTR3
CAediting_1263181	chr18_46673783_-	UTR3
CAediting_1263182	chr18_46673912_-	UTR3
CAediting_1263183	chr18_46673946_-	UTR3
CAediting_1263184	chr18_46675805_-	UTR3
CAediting_1263185	chr18_46675806_-	UTR3
CAediting_1263186	chr18_46675853_-	UTR3
CAediting_1263187	chr18_46675881_-	UTR3
CAediting_1263188	chr18_46675941_-	UTR3
CAediting_1263189	chr18_46675974_-	UTR3
CAediting_1263190	chr18_46675994_-	UTR3
CAediting_1263191	chr18_46676025_-	UTR3
CAediting_1263192	chr18_46676048_-	UTR3
CAediting_1263193	chr18_46676050_-	UTR3
CAediting_1263194	chr18_46676052_-	UTR3
CAediting_1263195	chr18_46701217_-	ncRNA_intronic
CAediting_1263196	chr18_46719874_-	ncRNA_intronic
CAediting_1263197	chr18_46719942_-	ncRNA_intronic
CAediting_1263198	chr18_46719952_-	ncRNA_intronic
CAediting_1263199	chr18_46748469_-	ncRNA_intronic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_1263127	chr18_46669815_-	SINE	Alu	AluSg4
CAediting_1263128	chr18_46669827_-	SINE	Alu	AluSg4
CAediting_1263129	chr18_46669842_-	SINE	Alu	AluSg4
CAediting_1263130	chr18_46669878_-	SINE	Alu	AluSg4
CAediting_1263131	chr18_46669969_-	SINE	Alu	AluSg4
CAediting_1263132	chr18_46669986_-	SINE	Alu	AluSg4
CAediting_1263133	chr18_46669993_-	SINE	Alu	AluSg4
CAediting_1263134	chr18_46670006_-	SINE	Alu	AluSg4
CAediting_1263135	chr18_46670012_-	SINE	Alu	AluSg4
CAediting_1263136	chr18_46670025_-	SINE	Alu	AluSg4
CAediting_1263137	chr18_46670031_-	SINE	Alu	AluSg4
CAediting_1263138	chr18_46670067_-	SINE	Alu	AluSg4
CAediting_1263139	chr18_46670446_-	SINE	Alu	AluJb
CAediting_1263140	chr18_46670463_-	SINE	Alu	AluJb
CAediting_1263141	chr18_46670477_-	SINE	Alu	AluJb
CAediting_1263142	chr18_46670502_-	SINE	Alu	AluJb
CAediting_1263143	chr18_46670508_-	SINE	Alu	AluJb
CAediting_1263144	chr18_46670510_-	SINE	Alu	AluJb
CAediting_1263145	chr18_46670520_-	SINE	Alu	AluJb
CAediting_1263146	chr18_46670524_-	SINE	Alu	AluJb
CAediting_1263147	chr18_46670533_-	SINE	Alu	AluJb
CAediting_1263148	chr18_46670540_-	SINE	Alu	AluJb
CAediting_1263149	chr18_46670556_-	SINE	Alu	AluJb
CAediting_1263150	chr18_46670571_-	SINE	Alu	AluJb
CAediting_1263151	chr18_46670572_-	SINE	Alu	AluJb
CAediting_1263152	chr18_46670576_-	SINE	Alu	AluJb
CAediting_1263153	chr18_46670580_-	SINE	Alu	AluJb
CAediting_1263154	chr18_46670586_-	SINE	Alu	AluJb
CAediting_1263155	chr18_46670590_-	SINE	Alu	AluJb
CAediting_1263156	chr18_46670646_-	SINE	Alu	AluJb
CAediting_1263157	chr18_46670659_-	SINE	Alu	AluJb
CAediting_1263158	chr18_46670660_-	SINE	Alu	AluJb
CAediting_1263159	chr18_46670688_-	SINE	Alu	AluJb
CAediting_1263160	chr18_46670699_-	SINE	Alu	AluJb
CAediting_1263161	chr18_46670704_-	SINE	Alu	AluJb
CAediting_1263162	chr18_46670705_-	SINE	Alu	AluJb
CAediting_1263163	chr18_46670713_-	SINE	Alu	AluJb
CAediting_1263164	chr18_46673595_-	DNA	hAT-Charlie	MER5A
CAediting_1263184	chr18_46675805_-	SINE	Alu	AluJo
CAediting_1263185	chr18_46675806_-	SINE	Alu	AluJo
CAediting_1263186	chr18_46675853_-	SINE	Alu	AluJo
CAediting_1263187	chr18_46675881_-	SINE	Alu	AluJo
CAediting_1263188	chr18_46675941_-	SINE	Alu	AluJo
CAediting_1263189	chr18_46675974_-	SINE	Alu	AluJo
CAediting_1263190	chr18_46675994_-	SINE	Alu	AluJo
CAediting_1263191	chr18_46676025_-	SINE	Alu	AluJo
CAediting_1263192	chr18_46676048_-	SINE	Alu	AluJo
CAediting_1263193	chr18_46676050_-	SINE	Alu	AluJo
CAediting_1263194	chr18_46676052_-	SINE	Alu	AluJo
CAediting_1263195	chr18_46701217_-	SINE	Alu	AluSx
CAediting_1263196	chr18_46719874_-	SINE	Alu	AluSz
CAediting_1263197	chr18_46719942_-	SINE	Alu	AluSz
CAediting_1263198	chr18_46719952_-	SINE	Alu	AluSz
CAediting_1263199	chr18_46748469_-	SINE	Alu	AluSq2

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RNA A-to-I editing events in the alternative splicing sites for ST8SIA5

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000101638.12.ST8SIA5.

Correlation between RNA A-to-I editing and PSI for ENSG00000101638.12.ST8SIA5.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for ST8SIA5

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for ST8SIA5

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for ST8SIA5

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1263147	chr18_46670533_-	ENSG00000101638.12	ENST00000538168	hsa-miR-1281	46670533	46670539	7mer-m8	46670532	46670548	151.00	-21.20
CAediting_1263155	chr18_46670590_-	ENSG00000101638.12	ENST00000538168	hsa-miR-140-3p	46670588	46670594	7mer-m8	46670587	46670608	146.00	-15.99
CAediting_1263161	chr18_46670704_-	ENSG00000101638.12	ENST00000538168	hsa-miR-8052	46670699	46670705	7mer-1a	46670699	46670720	142.00	-24.89
CAediting_1263178	chr18_46673767_-	ENSG00000101638.12	ENST00000538168	hsa-miR-3663-5p	46673762	46673768	7mer-m8	46673761	46673782	154.00	-24.90
CAediting_1263179	chr18_46673768_-	ENSG00000101638.12	ENST00000538168	hsa-miR-6853-3p	46673765	46673771	7mer-m8	46673764	46673787	156.00	-20.71
CAediting_1263128	chr18_46669827_-	ENSG00000101638.12	ENST00000538168	hsa-miR-3189-3p	46669826	46669832	7mer-m8	46669825	46669844	153.00	-21.32
CAediting_1263128	chr18_46669827_-	ENSG00000101638.12	ENST00000538168	hsa-miR-6813-3p	46669825	46669831	7mer-m8	46669824	46669844	140.00	-10.68
CAediting_1263129	chr18_46669842_-	ENSG00000101638.12	ENST00000538168	hsa-miR-4767	46669841	46669847	7mer-m8	46669840	46669863	142.00	-18.06
CAediting_1263130	chr18_46669878_-	ENSG00000101638.12	ENST00000538168	hsa-miR-3940-3p	46669874	46669880	7mer-m8	46669873	46669894	140.00	-23.19
CAediting_1263132	chr18_46669986_-	ENSG00000101638.12	ENST00000538168	hsa-miR-3622a-3p	46669982	46669989	8mer-1a	46669982	46670004	149.00	-18.21
CAediting_1263132	chr18_46669986_-	ENSG00000101638.12	ENST00000538168	hsa-miR-3622b-3p	46669982	46669989	8mer-1a	46669982	46670002	147.00	-18.77
CAediting_1263132	chr18_46669986_-	ENSG00000101638.12	ENST00000538168	hsa-miR-4539	46669986	46669991	6mer	46669985	46670004	141.00	-21.18
CAediting_1263133	chr18_46669993_-	ENSG00000101638.12	ENST00000538168	hsa-miR-1247-3p	46669991	46669997	7mer-m8	46669990	46670012	150.00	-22.19
CAediting_1263133	chr18_46669993_-	ENSG00000101638.12	ENST00000538168	hsa-miR-6746-5p	46669993	46669998	6mer	46669992	46670013	147.00	-35.83
CAediting_1263134	chr18_46670006_-	ENSG00000101638.12	ENST00000538168	hsa-miR-3929	46670003	46670008	6mer	46670002	46670026	144.00	-27.53
CAediting_1263134	chr18_46670006_-	ENSG00000101638.12	ENST00000538168	hsa-miR-485-5p	46670002	46670008	7mer-m8	46670001	46670021	161.00	-25.56
CAediting_1263134	chr18_46670006_-	ENSG00000101638.12	ENST00000538168	hsa-miR-6884-5p	46670002	46670008	7mer-m8	46670001	46670024	142.00	-21.46
CAediting_1263136	chr18_46670025_-	ENSG00000101638.12	ENST00000538168	hsa-miR-122-3p	46670024	46670029	6mer	46670023	46670043	140.00	-15.68
CAediting_1263138	chr18_46670067_-	ENSG00000101638.12	ENST00000538168	hsa-miR-4733-5p	46670064	46670070	7mer-m8	46670063	46670084	143.00	-8.30
CAediting_1263140	chr18_46670463_-	ENSG00000101638.12	ENST00000538168	hsa-miR-526b-5p	46670462	46670468	7mer-m8	46670461	46670483	153.00	-14.09
CAediting_1263142	chr18_46670502_-	ENSG00000101638.12	ENST00000538168	hsa-miR-143-5p	46670499	46670505	7mer-m8	46670498	46670520	163.00	-22.35
CAediting_1263145	chr18_46670520_-	ENSG00000101638.12	ENST00000538168	hsa-miR-324-3p	46670520	46670526	7mer-m8	46670519	46670541	149.00	-24.91
CAediting_1263145	chr18_46670520_-	ENSG00000101638.12	ENST00000538168	hsa-miR-4690-3p	46670515	46670522	8mer-1a	46670515	46670534	165.00	-31.39
CAediting_1263145	chr18_46670520_-	ENSG00000101638.12	ENST00000538168	hsa-miR-5685	46670515	46670522	8mer-1a	46670515	46670535	149.00	-19.15
CAediting_1263146	chr18_46670524_-	ENSG00000101638.12	ENST00000538168	hsa-miR-6511a-3p	46670519	46670524	6mer	46670518	46670539	144.00	-26.09
CAediting_1263146	chr18_46670524_-	ENSG00000101638.12	ENST00000538168	hsa-miR-6511a-3p	46670519	46670524	6mer	46670518	46670539	144.00	-26.09
CAediting_1263146	chr18_46670524_-	ENSG00000101638.12	ENST00000538168	hsa-miR-6511a-3p	46670519	46670524	6mer	46670518	46670539	144.00	-26.09
CAediting_1263146	chr18_46670524_-	ENSG00000101638.12	ENST00000538168	hsa-miR-6511a-3p	46670519	46670524	6mer	46670518	46670539	144.00	-26.09
CAediting_1263146	chr18_46670524_-	ENSG00000101638.12	ENST00000538168	hsa-miR-6511b-3p	46670519	46670524	6mer	46670518	46670540	148.00	-28.80
CAediting_1263146	chr18_46670524_-	ENSG00000101638.12	ENST00000538168	hsa-miR-6511b-3p	46670519	46670524	6mer	46670518	46670540	148.00	-28.80
CAediting_1263146	chr18_46670524_-	ENSG00000101638.12	ENST00000538168	hsa-miR-6784-3p	46670519	46670524	6mer	46670518	46670540	151.00	-31.03
CAediting_1263149	chr18_46670556_-	ENSG00000101638.12	ENST00000538168	hsa-miR-2114-5p	46670552	46670557	6mer	46670551	46670572	142.00	-20.99
CAediting_1263150	chr18_46670571_-	ENSG00000101638.12	ENST00000538168	hsa-miR-1200	46670569	46670575	7mer-m8	46670568	46670589	141.00	-18.70
CAediting_1263150	chr18_46670571_-	ENSG00000101638.12	ENST00000538168	hsa-miR-660-3p	46670567	46670573	7mer-m8	46670566	46670587	158.00	-25.90
CAediting_1263151	chr18_46670572_-	ENSG00000101638.12	ENST00000538168	hsa-miR-516a-5p	46670569	46670575	7mer-m8	46670568	46670590	142.00	-17.06
CAediting_1263151	chr18_46670572_-	ENSG00000101638.12	ENST00000538168	hsa-miR-516a-5p	46670569	46670575	7mer-m8	46670568	46670590	142.00	-17.06
CAediting_1263152	chr18_46670576_-	ENSG00000101638.12	ENST00000538168	hsa-miR-1207-3p	46670576	46670582	7mer-m8	46670575	46670592	152.00	-14.18
CAediting_1263152	chr18_46670576_-	ENSG00000101638.12	ENST00000538168	hsa-miR-646	46670574	46670580	7mer-m8	46670573	46670591	156.00	-19.19
CAediting_1263154	chr18_46670586_-	ENSG00000101638.12	ENST00000538168	hsa-miR-6510-3p	46670584	46670590	7mer-m8	46670583	46670605	144.00	-13.02
CAediting_1263157	chr18_46670659_-	ENSG00000101638.12	ENST00000538168	hsa-miR-1200	46670657	46670663	7mer-m8	46670656	46670677	148.00	-25.66
CAediting_1263158	chr18_46670660_-	ENSG00000101638.12	ENST00000538168	hsa-miR-516a-5p	46670657	46670663	7mer-m8	46670656	46670678	141.00	-19.27
CAediting_1263158	chr18_46670660_-	ENSG00000101638.12	ENST00000538168	hsa-miR-516a-5p	46670657	46670663	7mer-m8	46670656	46670678	141.00	-19.27
CAediting_1263159	chr18_46670688_-	ENSG00000101638.12	ENST00000538168	hsa-miR-3943	46670684	46670690	7mer-m8	46670683	46670704	143.00	-22.28
CAediting_1263162	chr18_46670705_-	ENSG00000101638.12	ENST00000538168	hsa-miR-638	46670699	46670705	7mer-1a	46670699	46670723	147.00	-30.82
CAediting_1263165	chr18_46673633_-	ENSG00000101638.12	ENST00000538168	hsa-miR-4733-5p	46673629	46673635	7mer-m8	46673628	46673646	155.00	-21.61
CAediting_1263165	chr18_46673633_-	ENSG00000101638.12	ENST00000538168	hsa-miR-95-5p	46673633	46673639	7mer-m8	46673632	46673651	152.00	-11.34
CAediting_1263166	chr18_46673636_-	ENSG00000101638.12	ENST00000538168	hsa-miR-495-3p	46673633	46673640	8mer-1a	46673633	46673655	159.00	-13.96
CAediting_1263166	chr18_46673636_-	ENSG00000101638.12	ENST00000538168	hsa-miR-5688	46673633	46673640	8mer-1a	46673633	46673654	156.00	-13.67
CAediting_1263168	chr18_46673652_-	ENSG00000101638.12	ENST00000538168	hsa-miR-515-5p	46673649	46673655	7mer-m8	46673648	46673670	159.00	-14.75
CAediting_1263168	chr18_46673652_-	ENSG00000101638.12	ENST00000538168	hsa-miR-515-5p	46673649	46673655	7mer-m8	46673648	46673670	159.00	-14.75
CAediting_1263168	chr18_46673652_-	ENSG00000101638.12	ENST00000538168	hsa-miR-519d-5p	46673649	46673656	8mer-1a	46673649	46673672	166.00	-23.04
CAediting_1263168	chr18_46673652_-	ENSG00000101638.12	ENST00000538168	hsa-miR-519e-5p	46673649	46673655	7mer-m8	46673648	46673668	165.00	-20.53
CAediting_1263169	chr18_46673660_-	ENSG00000101638.12	ENST00000538168	hsa-miR-4436b-3p	46673656	46673662	7mer-m8	46673655	46673676	147.00	-18.94
CAediting_1263169	chr18_46673660_-	ENSG00000101638.12	ENST00000538168	hsa-miR-4436b-3p	46673656	46673662	7mer-m8	46673655	46673676	147.00	-18.94
CAediting_1263169	chr18_46673660_-	ENSG00000101638.12	ENST00000538168	hsa-miR-4494	46673660	46673666	7mer-m8	46673659	46673680	153.00	-17.45
CAediting_1263169	chr18_46673660_-	ENSG00000101638.12	ENST00000538168	hsa-miR-4632-5p	46673656	46673662	7mer-m8	46673655	46673679	152.00	-23.01
CAediting_1263169	chr18_46673660_-	ENSG00000101638.12	ENST00000538168	hsa-miR-4771	46673659	46673665	7mer-m8	46673658	46673680	153.00	-13.41
CAediting_1263169	chr18_46673660_-	ENSG00000101638.12	ENST00000538168	hsa-miR-4771	46673659	46673665	7mer-m8	46673658	46673680	153.00	-13.41
CAediting_1263169	chr18_46673660_-	ENSG00000101638.12	ENST00000538168	hsa-miR-6735-5p	46673656	46673662	7mer-m8	46673655	46673680	150.00	-20.08
CAediting_1263169	chr18_46673660_-	ENSG00000101638.12	ENST00000538168	hsa-miR-6879-5p	46673656	46673662	7mer-m8	46673655	46673678	146.00	-19.83
CAediting_1263169	chr18_46673660_-	ENSG00000101638.12	ENST00000538168	hsa-miR-7843-5p	46673656	46673662	7mer-m8	46673655	46673676	145.00	-17.18
CAediting_1263171	chr18_46673667_-	ENSG00000101638.12	ENST00000538168	hsa-miR-1288-5p	46673667	46673672	6mer	46673666	46673688	140.00	-21.07
CAediting_1263171	chr18_46673667_-	ENSG00000101638.12	ENST00000538168	hsa-miR-3158-5p	46673664	46673670	7mer-m8	46673663	46673683	140.00	-12.45
CAediting_1263171	chr18_46673667_-	ENSG00000101638.12	ENST00000538168	hsa-miR-3158-5p	46673664	46673670	7mer-m8	46673663	46673683	140.00	-12.45
CAediting_1263171	chr18_46673667_-	ENSG00000101638.12	ENST00000538168	hsa-miR-4418	46673663	46673669	7mer-m8	46673662	46673679	148.00	-13.18
CAediting_1263171	chr18_46673667_-	ENSG00000101638.12	ENST00000538168	hsa-miR-509-3-5p	46673663	46673669	7mer-m8	46673662	46673683	145.00	-15.57
CAediting_1263171	chr18_46673667_-	ENSG00000101638.12	ENST00000538168	hsa-miR-509-5p	46673663	46673669	7mer-m8	46673662	46673682	145.00	-12.19
CAediting_1263171	chr18_46673667_-	ENSG00000101638.12	ENST00000538168	hsa-miR-509-5p	46673663	46673669	7mer-m8	46673662	46673682	145.00	-12.19
CAediting_1263175	chr18_46673735_-	ENSG00000101638.12	ENST00000538168	hsa-miR-7151-5p	46673732	46673738	7mer-m8	46673731	46673756	152.00	-23.88
CAediting_1263176	chr18_46673744_-	ENSG00000101638.12	ENST00000538168	hsa-miR-455-3p	46673739	46673745	7mer-m8	46673738	46673758	141.00	-12.74
CAediting_1263177	chr18_46673749_-	ENSG00000101638.12	ENST00000538168	hsa-miR-4635	46673749	46673755	7mer-m8	46673748	46673769	148.00	-14.18
CAediting_1263177	chr18_46673749_-	ENSG00000101638.12	ENST00000538168	hsa-miR-4780	46673747	46673753	7mer-m8	46673746	46673764	146.00	-17.19
CAediting_1263181	chr18_46673783_-	ENSG00000101638.12	ENST00000538168	hsa-miR-6886-5p	46673780	46673786	7mer-m8	46673779	46673800	156.00	-25.51
CAediting_1263182	chr18_46673912_-	ENSG00000101638.12	ENST00000538168	hsa-miR-5193	46673908	46673914	7mer-m8	46673907	46673928	141.00	-18.05
CAediting_1263182	chr18_46673912_-	ENSG00000101638.12	ENST00000538168	hsa-miR-6749-3p	46673910	46673916	7mer-m8	46673909	46673929	140.00	-21.28
CAediting_1263182	chr18_46673912_-	ENSG00000101638.12	ENST00000538168	hsa-miR-6791-3p	46673907	46673913	7mer-m8	46673906	46673926	141.00	-19.85
CAediting_1263182	chr18_46673912_-	ENSG00000101638.12	ENST00000538168	hsa-miR-6829-3p	46673907	46673913	7mer-m8	46673906	46673925	150.00	-20.97
CAediting_1263183	chr18_46673946_-	ENSG00000101638.12	ENST00000538168	hsa-miR-4786-5p	46673941	46673947	7mer-m8	46673940	46673961	162.00	-23.70
CAediting_1263184	chr18_46675805_-	ENSG00000101638.12	ENST00000538168	hsa-miR-3189-3p	46675804	46675810	7mer-m8	46675803	46675822	141.00	-22.40
CAediting_1263184	chr18_46675805_-	ENSG00000101638.12	ENST00000538168	hsa-miR-6813-3p	46675803	46675809	7mer-m8	46675802	46675822	140.00	-12.88
CAediting_1263185	chr18_46675806_-	ENSG00000101638.12	ENST00000538168	hsa-miR-326	46675804	46675810	7mer-m8	46675803	46675822	140.00	-15.33
CAediting_1263185	chr18_46675806_-	ENSG00000101638.12	ENST00000538168	hsa-miR-330-5p	46675804	46675810	7mer-m8	46675803	46675824	140.00	-22.45
CAediting_1263185	chr18_46675806_-	ENSG00000101638.12	ENST00000538168	hsa-miR-4314	46675805	46675811	7mer-m8	46675804	46675821	140.00	-18.79
CAediting_1263185	chr18_46675806_-	ENSG00000101638.12	ENST00000538168	hsa-miR-514a-5p	46675803	46675809	7mer-m8	46675802	46675822	154.00	-19.31
CAediting_1263185	chr18_46675806_-	ENSG00000101638.12	ENST00000538168	hsa-miR-514a-5p	46675803	46675809	7mer-m8	46675802	46675822	154.00	-19.31
CAediting_1263185	chr18_46675806_-	ENSG00000101638.12	ENST00000538168	hsa-miR-514a-5p	46675803	46675809	7mer-m8	46675802	46675822	154.00	-19.31
CAediting_1263186	chr18_46675853_-	ENSG00000101638.12	ENST00000538168	hsa-miR-4786-5p	46675848	46675854	7mer-m8	46675847	46675868	145.00	-21.23
CAediting_1263186	chr18_46675853_-	ENSG00000101638.12	ENST00000538168	hsa-miR-6849-3p	46675852	46675858	7mer-m8	46675851	46675871	156.00	-20.61
CAediting_1263187	chr18_46675881_-	ENSG00000101638.12	ENST00000538168	hsa-miR-340-3p	46675877	46675883	7mer-m8	46675876	46675897	141.00	-15.89
CAediting_1263187	chr18_46675881_-	ENSG00000101638.12	ENST00000538168	hsa-miR-4684-5p	46675880	46675886	7mer-m8	46675879	46675900	144.00	-8.10
CAediting_1263187	chr18_46675881_-	ENSG00000101638.12	ENST00000538168	hsa-miR-519a-2-5p	46675880	46675887	8mer-1a	46675880	46675900	154.00	-14.62
CAediting_1263187	chr18_46675881_-	ENSG00000101638.12	ENST00000538168	hsa-miR-520b-5p	46675880	46675887	8mer-1a	46675880	46675900	154.00	-14.62
CAediting_1263187	chr18_46675881_-	ENSG00000101638.12	ENST00000538168	hsa-miR-6827-3p	46675877	46675883	7mer-m8	46675876	46675896	147.00	-16.55
CAediting_1263188	chr18_46675941_-	ENSG00000101638.12	ENST00000538168	hsa-miR-5690	46675941	46675947	7mer-m8	46675940	46675960	145.00	-16.74
CAediting_1263188	chr18_46675941_-	ENSG00000101638.12	ENST00000538168	hsa-miR-7977	46675938	46675944	7mer-m8	46675937	46675954	142.00	-12.24
CAediting_1263189	chr18_46675974_-	ENSG00000101638.12	ENST00000538168	hsa-miR-3622a-3p	46675970	46675977	8mer-1a	46675970	46675991	151.00	-21.00
CAediting_1263189	chr18_46675974_-	ENSG00000101638.12	ENST00000538168	hsa-miR-3622b-3p	46675970	46675977	8mer-1a	46675970	46675990	163.00	-26.90
CAediting_1263191	chr18_46676025_-	ENSG00000101638.12	ENST00000538168	hsa-miR-6512-3p	46676023	46676029	7mer-m8	46676022	46676043	142.00	-19.67
CAediting_1263191	chr18_46676025_-	ENSG00000101638.12	ENST00000538168	hsa-miR-6720-5p	46676023	46676029	7mer-m8	46676022	46676043	152.00	-24.43
CAediting_1263191	chr18_46676025_-	ENSG00000101638.12	ENST00000538168	hsa-miR-6849-3p	46676023	46676030	8mer-1a	46676023	46676044	152.00	-18.04
CAediting_1263191	chr18_46676025_-	ENSG00000101638.12	ENST00000538168	hsa-miR-766-3p	46676022	46676028	7mer-m8	46676021	46676042	145.00	-19.20
CAediting_1263192	chr18_46676048_-	ENSG00000101638.12	ENST00000538168	hsa-miR-10a-5p	46676046	46676052	7mer-m8	46676045	46676068	141.00	-14.15
CAediting_1263192	chr18_46676048_-	ENSG00000101638.12	ENST00000538168	hsa-miR-10b-5p	46676046	46676052	7mer-m8	46676045	46676068	149.00	-15.76
CAediting_1263192	chr18_46676048_-	ENSG00000101638.12	ENST00000538168	hsa-miR-339-5p	46676047	46676053	7mer-m8	46676046	46676067	147.00	-17.88
CAediting_1263192	chr18_46676048_-	ENSG00000101638.12	ENST00000538168	hsa-miR-4421	46676048	46676054	7mer-m8	46676047	46676069	151.00	-15.70
CAediting_1263192	chr18_46676048_-	ENSG00000101638.12	ENST00000538168	hsa-miR-4725-5p	46676045	46676051	7mer-m8	46676044	46676064	140.00	-16.17
CAediting_1263192	chr18_46676048_-	ENSG00000101638.12	ENST00000538168	hsa-miR-504-5p	46676045	46676051	7mer-m8	46676044	46676063	148.00	-18.15
CAediting_1263192	chr18_46676048_-	ENSG00000101638.12	ENST00000538168	hsa-miR-5699-3p	46676048	46676054	7mer-m8	46676047	46676068	141.00	-16.39
CAediting_1263193	chr18_46676050_-	ENSG00000101638.12	ENST00000538168	hsa-miR-340-3p	46676048	46676055	8mer-1a	46676048	46676069	149.00	-20.13
CAediting_1263193	chr18_46676050_-	ENSG00000101638.12	ENST00000538168	hsa-miR-6827-3p	46676048	46676055	8mer-1a	46676048	46676068	140.00	-14.67
CAediting_1263194	chr18_46676052_-	ENSG00000101638.12	ENST00000538168	hsa-miR-5001-3p	46676048	46676054	7mer-m8	46676047	46676068	148.00	-18.12

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1263148	chr18_46670540_-	ENSG00000101638.12	ENST00000538168	hsa-miR-10400-3p	46670540	46670546	7mer-m8	46670539	46670563	141	-22.41
CAediting_1263182	chr18_46673912_-	ENSG00000101638.12	ENST00000538168	hsa-miR-1236-3p	46673909	46673915	7mer-m8	46673908	46673930	146	-22.79
CAediting_1263191	chr18_46676025_-	ENSG00000101638.12	ENST00000538168	hsa-miR-1251-5p	46676022	46676028	7mer-m8	46676021	46676046	144	-16.03
CAediting_1263149	chr18_46670556_-	ENSG00000101638.12	ENST00000538168	hsa-miR-1260b	46670556	46670562	7mer-m8	46670555	46670573	152	-17.38
CAediting_1263191	chr18_46676025_-	ENSG00000101638.12	ENST00000538168	hsa-miR-1287-3p	46676023	46676029	7mer-m8	46676022	46676043	148	-18.57
CAediting_1263148	chr18_46670540_-	ENSG00000101638.12	ENST00000538168	hsa-miR-1343-3p	46670537	46670543	7mer-m8	46670536	46670559	151	-26.23
CAediting_1263141	chr18_46670477_-	ENSG00000101638.12	ENST00000538168	hsa-miR-149-5p	46670475	46670482	8mer-1a	46670475	46670495	150	-21.98
CAediting_1263159	chr18_46670688_-	ENSG00000101638.12	ENST00000538168	hsa-miR-150-5p	46670687	46670693	7mer-m8	46670686	46670707	140	-13.58
CAediting_1263169	chr18_46673660_-	ENSG00000101638.12	ENST00000538168	hsa-miR-151a-3p	46673660	46673666	7mer-m8	46673659	46673679	154	-12.24
CAediting_1263170	chr18_46673665_-	ENSG00000101638.12	ENST00000538168	hsa-miR-151a-3p	46673660	46673666	7mer-m8	46673659	46673679	154	-12.24
CAediting_1263190	chr18_46675994_-	ENSG00000101638.12	ENST00000538168	hsa-miR-17-3p	46675993	46675999	7mer-m8	46675992	46676012	154	-18.23
CAediting_1263169	chr18_46673660_-	ENSG00000101638.12	ENST00000538168	hsa-miR-197-5p	46673657	46673663	7mer-m8	46673656	46673678	140	-13.12
CAediting_1263182	chr18_46673912_-	ENSG00000101638.12	ENST00000538168	hsa-miR-2682-3p	46673907	46673913	7mer-m8	46673906	46673931	148	-22.6
CAediting_1263169	chr18_46673660_-	ENSG00000101638.12	ENST00000538168	hsa-miR-3132	46673657	46673663	7mer-m8	46673656	46673678	144	-13.61
CAediting_1263149	chr18_46670556_-	ENSG00000101638.12	ENST00000538168	hsa-miR-3156-3p	46670556	46670561	6mer	46670555	46670575	150	-24.19
CAediting_1263149	chr18_46670556_-	ENSG00000101638.12	ENST00000538168	hsa-miR-3156-3p	46670556	46670561	6mer	46670555	46670575	150	-24.19
CAediting_1263130	chr18_46669878_-	ENSG00000101638.12	ENST00000538168	hsa-miR-3190-5p	46669877	46669883	7mer-m8	46669876	46669895	141	-19.68
CAediting_1263137	chr18_46670031_-	ENSG00000101638.12	ENST00000538168	hsa-miR-324-3p	46670027	46670033	7mer-m8	46670026	46670048	148	-24.16
CAediting_1263132	chr18_46669986_-	ENSG00000101638.12	ENST00000538168	hsa-miR-3614-5p	46669982	46669988	7mer-1a	46669982	46670005	155	-24.76
CAediting_1263189	chr18_46675974_-	ENSG00000101638.12	ENST00000538168	hsa-miR-3614-5p	46675970	46675976	7mer-1a	46675970	46675998	143	-25.49
CAediting_1263192	chr18_46676048_-	ENSG00000101638.12	ENST00000538168	hsa-miR-3664-5p	46676046	46676052	7mer-m8	46676045	46676067	155	-15.94
CAediting_1263193	chr18_46676050_-	ENSG00000101638.12	ENST00000538168	hsa-miR-3664-5p	46676046	46676052	7mer-m8	46676045	46676067	155	-15.94
CAediting_1263133	chr18_46669993_-	ENSG00000101638.12	ENST00000538168	hsa-miR-3689a-3p	46669993	46669999	7mer-m8	46669992	46670015	155	-30.8
CAediting_1263129	chr18_46669842_-	ENSG00000101638.12	ENST00000538168	hsa-miR-3689d	46669837	46669843	7mer-m8	46669836	46669858	146	-20.01
CAediting_1263129	chr18_46669842_-	ENSG00000101638.12	ENST00000538168	hsa-miR-3689d	46669837	46669843	7mer-m8	46669836	46669858	146	-20.01
CAediting_1263138	chr18_46670067_-	ENSG00000101638.12	ENST00000538168	hsa-miR-371b-5p	46670065	46670072	8mer-1a	46670065	46670086	146	-8.27
CAediting_1263138	chr18_46670067_-	ENSG00000101638.12	ENST00000538168	hsa-miR-373-5p	46670065	46670072	8mer-1a	46670065	46670086	142	-9.35
CAediting_1263137	chr18_46670031_-	ENSG00000101638.12	ENST00000538168	hsa-miR-4252	46670025	46670032	8mer-1a	46670025	46670045	149	-22.82
CAediting_1263142	chr18_46670502_-	ENSG00000101638.12	ENST00000538168	hsa-miR-4280	46670498	46670504	7mer-m8	46670497	46670519	151	-20.63
CAediting_1263131	chr18_46669969_-	ENSG00000101638.12	ENST00000538168	hsa-miR-4478	46669965	46669971	7mer-m8	46669964	46669979	149	-25.05
CAediting_1263154	chr18_46670586_-	ENSG00000101638.12	ENST00000538168	hsa-miR-4513	46670583	46670589	7mer-m8	46670582	46670604	153	-17.62
CAediting_1263192	chr18_46676048_-	ENSG00000101638.12	ENST00000538168	hsa-miR-4522	46676045	46676051	7mer-m8	46676044	46676063	151	-15.25
CAediting_1263193	chr18_46676050_-	ENSG00000101638.12	ENST00000538168	hsa-miR-4522	46676045	46676051	7mer-m8	46676044	46676063	151	-15.25
CAediting_1263131	chr18_46669969_-	ENSG00000101638.12	ENST00000538168	hsa-miR-4649-3p	46669968	46669974	7mer-m8	46669967	46669987	140	-14.11
CAediting_1263148	chr18_46670540_-	ENSG00000101638.12	ENST00000538168	hsa-miR-4674	46670540	46670546	7mer-m8	46670539	46670559	150	-24.83
CAediting_1263154	chr18_46670586_-	ENSG00000101638.12	ENST00000538168	hsa-miR-4740-5p	46670582	46670588	7mer-m8	46670581	46670600	142	-18.82
CAediting_1263164	chr18_46673595_-	ENSG00000101638.12	ENST00000538168	hsa-miR-4762-3p	46673592	46673598	7mer-m8	46673591	46673615	146	-12.62
CAediting_1263190	chr18_46675994_-	ENSG00000101638.12	ENST00000538168	hsa-miR-485-5p	46675989	46675995	7mer-m8	46675988	46676008	154	-18.97
CAediting_1263133	chr18_46669993_-	ENSG00000101638.12	ENST00000538168	hsa-miR-490-3p	46669989	46669995	7mer-m8	46669988	46670010	146	-18.08
CAediting_1263147	chr18_46670533_-	ENSG00000101638.12	ENST00000538168	hsa-miR-5001-3p	46670531	46670537	7mer-m8	46670530	46670554	154	-24.16
CAediting_1263194	chr18_46676052_-	ENSG00000101638.12	ENST00000538168	hsa-miR-514b-5p	46676052	46676057	6mer	46676051	46676073	141	-12.72
CAediting_1263138	chr18_46670067_-	ENSG00000101638.12	ENST00000538168	hsa-miR-514b-5p	46670065	46670070	6mer	46670064	46670085	146	-13.43
CAediting_1263150	chr18_46670571_-	ENSG00000101638.12	ENST00000538168	hsa-miR-526b-5p	46670569	46670575	7mer-m8	46670568	46670592	144	-20.06
CAediting_1263151	chr18_46670572_-	ENSG00000101638.12	ENST00000538168	hsa-miR-526b-5p	46670569	46670575	7mer-m8	46670568	46670592	144	-20.06
CAediting_1263149	chr18_46670556_-	ENSG00000101638.12	ENST00000538168	hsa-miR-532-3p	46670554	46670561	8mer-1a	46670554	46670575	153	-20.64
CAediting_1263129	chr18_46669842_-	ENSG00000101638.12	ENST00000538168	hsa-miR-541-3p	46669840	46669846	7mer-m8	46669839	46669857	152	-19.95
CAediting_1263130	chr18_46669878_-	ENSG00000101638.12	ENST00000538168	hsa-miR-548s	46669878	46669884	7mer-m8	46669877	46669898	151	-13.76
CAediting_1263142	chr18_46670502_-	ENSG00000101638.12	ENST00000538168	hsa-miR-574-5p	46670497	46670502	6mer	46670496	46670518	142	-20.21
CAediting_1263163	chr18_46670713_-	ENSG00000101638.12	ENST00000538168	hsa-miR-576-3p	46670708	46670714	7mer-m8	46670707	46670728	141	-10.88
CAediting_1263134	chr18_46670006_-	ENSG00000101638.12	ENST00000538168	hsa-miR-6086	46670002	46670008	7mer-m8	46670001	46670020	146	-22.53
CAediting_1263129	chr18_46669842_-	ENSG00000101638.12	ENST00000538168	hsa-miR-6134	46669838	46669844	7mer-m8	46669837	46669855	150	-15.77
CAediting_1263138	chr18_46670067_-	ENSG00000101638.12	ENST00000538168	hsa-miR-616-5p	46670065	46670072	8mer-1a	46670065	46670086	140	-7.22
CAediting_1263161	chr18_46670704_-	ENSG00000101638.12	ENST00000538168	hsa-miR-6504-3p	46670703	46670709	7mer-m8	46670702	46670723	145	-14.54
CAediting_1263162	chr18_46670705_-	ENSG00000101638.12	ENST00000538168	hsa-miR-6504-3p	46670703	46670709	7mer-m8	46670702	46670723	145	-14.54
CAediting_1263160	chr18_46670699_-	ENSG00000101638.12	ENST00000538168	hsa-miR-6506-5p	46670698	46670704	7mer-m8	46670697	46670716	147	-14.86
CAediting_1263180	chr18_46673770_-	ENSG00000101638.12	ENST00000538168	hsa-miR-651-5p	46673770	46673776	7mer-m8	46673769	46673790	140	-11.34
CAediting_1263129	chr18_46669842_-	ENSG00000101638.12	ENST00000538168	hsa-miR-654-5p	46669840	46669846	7mer-m8	46669839	46669860	145	-19.21
CAediting_1263148	chr18_46670540_-	ENSG00000101638.12	ENST00000538168	hsa-miR-660-3p	46670535	46670541	7mer-m8	46670534	46670554	152	-16.78
CAediting_1263141	chr18_46670477_-	ENSG00000101638.12	ENST00000538168	hsa-miR-6753-3p	46670473	46670478	6mer	46670472	46670496	143	-29.95
CAediting_1263169	chr18_46673660_-	ENSG00000101638.12	ENST00000538168	hsa-miR-6755-5p	46673656	46673662	7mer-m8	46673655	46673676	150	-17.07
CAediting_1263159	chr18_46670688_-	ENSG00000101638.12	ENST00000538168	hsa-miR-6778-3p	46670685	46670691	7mer-m8	46670684	46670703	146	-14.16
CAediting_1263133	chr18_46669993_-	ENSG00000101638.12	ENST00000538168	hsa-miR-6779-5p	46669993	46669999	7mer-m8	46669992	46670010	152	-26.1
CAediting_1263133	chr18_46669993_-	ENSG00000101638.12	ENST00000538168	hsa-miR-6780a-5p	46669993	46669999	7mer-m8	46669992	46670016	151	-27.52
CAediting_1263182	chr18_46673912_-	ENSG00000101638.12	ENST00000538168	hsa-miR-6781-3p	46673907	46673913	7mer-m8	46673906	46673929	150	-20.42
CAediting_1263148	chr18_46670540_-	ENSG00000101638.12	ENST00000538168	hsa-miR-6783-3p	46670537	46670543	7mer-m8	46670536	46670557	151	-23.12
CAediting_1263163	chr18_46670713_-	ENSG00000101638.12	ENST00000538168	hsa-miR-6807-5p	46670713	46670719	7mer-m8	46670712	46670734	151	-21.62
CAediting_1263147	chr18_46670533_-	ENSG00000101638.12	ENST00000538168	hsa-miR-6836-3p	46670533	46670539	7mer-m8	46670532	46670551	142	-20.11
CAediting_1263129	chr18_46669842_-	ENSG00000101638.12	ENST00000538168	hsa-miR-6851-5p	46669837	46669843	7mer-m8	46669836	46669862	147	-27.25
CAediting_1263133	chr18_46669993_-	ENSG00000101638.12	ENST00000538168	hsa-miR-6852-5p	46669991	46669996	6mer	46669990	46670010	140	-21.22
CAediting_1263154	chr18_46670586_-	ENSG00000101638.12	ENST00000538168	hsa-miR-6855-3p	46670583	46670589	7mer-m8	46670582	46670602	143	-11.75
CAediting_1263151	chr18_46670572_-	ENSG00000101638.12	ENST00000538168	hsa-miR-6869-5p	46670571	46670578	8mer-1a	46670571	46670593	149	-18.24
CAediting_1263152	chr18_46670576_-	ENSG00000101638.12	ENST00000538168	hsa-miR-6869-5p	46670571	46670578	8mer-1a	46670571	46670593	149	-18.24
CAediting_1263190	chr18_46675994_-	ENSG00000101638.12	ENST00000538168	hsa-miR-6884-5p	46675989	46675995	7mer-m8	46675988	46676010	155	-20.15
CAediting_1263192	chr18_46676048_-	ENSG00000101638.12	ENST00000538168	hsa-miR-6888-3p	46676048	46676054	7mer-m8	46676047	46676067	151	-14.9
CAediting_1263193	chr18_46676050_-	ENSG00000101638.12	ENST00000538168	hsa-miR-6888-3p	46676048	46676054	7mer-m8	46676047	46676067	151	-14.9
CAediting_1263194	chr18_46676052_-	ENSG00000101638.12	ENST00000538168	hsa-miR-6888-3p	46676048	46676054	7mer-m8	46676047	46676067	151	-14.9
CAediting_1263131	chr18_46669969_-	ENSG00000101638.12	ENST00000538168	hsa-miR-7160-5p	46669967	46669973	7mer-m8	46669966	46669986	146	-17.63
CAediting_1263154	chr18_46670586_-	ENSG00000101638.12	ENST00000538168	hsa-miR-8052	46670580	46670587	8mer-1a	46670580	46670603	149	-19.19
CAediting_1263141	chr18_46670477_-	ENSG00000101638.12	ENST00000538168	hsa-miR-8057	46670477	46670483	7mer-m8	46670476	46670497	151	-20.24
CAediting_1263182	chr18_46673912_-	ENSG00000101638.12	ENST00000538168	hsa-miR-877-3p	46673908	46673914	7mer-m8	46673907	46673927	146	-17.05
CAediting_1263185	chr18_46675806_-	ENSG00000101638.12	ENST00000538168	hsa-miR-887-5p	46675805	46675812	8mer-1a	46675805	46675826	148	-16.93
CAediting_1263176	chr18_46673744_-	ENSG00000101638.12	ENST00000538168	hsa-miR-934	46673741	46673746	6mer	46673740	46673763	141	-19.68
CAediting_1263148	chr18_46670540_-	ENSG00000101638.12	ENST00000538168	hsa-miR-939-3p	46670537	46670544	8mer-1a	46670537	46670557	143	-21.72

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_748296	chr10_51299626_+	ENSG00000101638.12	ENST00000538168	hsa-miR-605-3p	46676337	46676343	7mer-m8	46676336	46676358	150	-16.45
CAediting_980496	chr14_31014685_-	ENSG00000101638.12	ENST00000538168	hsa-miR-624-3p	46678282	46678287	6mer	46678281	46678301	151	-25.62
CAediting_980496	chr14_31014685_-	ENSG00000101638.12	ENST00000538168	hsa-miR-624-3p	46673621	46673627	7mer-1a	46673621	46673640	140	-13.97
CAediting_980496	chr14_31014685_-	ENSG00000101638.12	ENST00000538168	hsa-miR-624-3p	46670620	46670626	7mer-m8	46670619	46670639	160	-16.55
CAediting_980496	chr14_31014685_-	ENSG00000101638.12	ENST00000538168	hsa-miR-624-3p	46670469	46670475	7mer-m8	46670468	46670487	151	-17.22
CAediting_980496	chr14_31014685_-	ENSG00000101638.12	ENST00000538168	hsa-miR-624-3p	46670316	46670322	7mer-m8	46670315	46670337	145	-18.47
CAediting_393	chr1_1167164_+	ENSG00000101638.12	ENST00000538168	hsa-miR-200b-3p	46677470	46677475	6mer	46677469	46677492	154	-20.51
CAediting_393	chr1_1167164_+	ENSG00000101638.12	ENST00000538168	hsa-miR-200b-3p	46670694	46670700	7mer-m8	46670693	46670713	144	-15.09
CAediting_393	chr1_1167164_+	ENSG00000101638.12	ENST00000538168	hsa-miR-200b-3p	46670335	46670341	7mer-m8	46670334	46670355	142	-15.16
CAediting_688080	chr9_63819626_+	ENSG00000101638.12	ENST00000538168	hsa-miR-4477b	46669295	46669301	7mer-m8	46669294	46669317	143	-13.25
CAediting_688080	chr9_63819626_+	ENSG00000101638.12	ENST00000538168	hsa-miR-4477b	46675462	46675467	6mer	46675450	46675472	166	-18.77
CAediting_688080	chr9_63819626_+	ENSG00000101638.12	ENST00000538168	hsa-miR-4477b	46675451	46675457	7mer-m8	46675450	46675472	166	-18.77
CAediting_688080	chr9_63819626_+	ENSG00000101638.12	ENST00000538168	hsa-miR-4477b	46674194	46674201	8mer-1a	46674194	46674215	140	-8.33
CAediting_688081	chr9_63819627_+	ENSG00000101638.12	ENST00000538168	hsa-miR-4477b	46677102	46677108	7mer-m8	46677101	46677126	148	-14.92
CAediting_688081	chr9_63819627_+	ENSG00000101638.12	ENST00000538168	hsa-miR-4477b	46672868	46672875	8mer-1a	46672868	46672889	160	-17.84
CAediting_688081	chr9_63819627_+	ENSG00000101638.12	ENST00000590488	hsa-miR-4477b	46731747	46731753	7mer-m8	46731746	46731767	140	-9.43
CAediting_1054808	chr15_66496985_-	ENSG00000101638.12	ENST00000538168	hsa-miR-4512	46678426	46678432	7mer-m8	46678425	46678446	140	-13.78
CAediting_1229413	chr17_67471544_+	ENSG00000101638.12	ENST00000538168	hsa-miR-548aa	46671278	46671284	7mer-m8	46671277	46671302	150	-14.96
CAediting_1229414	chr17_67471546_+	ENSG00000101638.12	ENST00000538168	hsa-miR-548aa	46676072	46676078	7mer-m8	46676071	46676099	147	-13.55
CAediting_1229414	chr17_67471546_+	ENSG00000101638.12	ENST00000538168	hsa-miR-548aa	46675757	46675763	7mer-m8	46675756	46675779	156	-15.45
CAediting_1351755	chr19_40282625_-	ENSG00000101638.12	ENST00000538168	hsa-miR-641	46677602	46677609	8mer-1a	46677602	46677626	152	-16.01
CAediting_1351755	chr19_40282625_-	ENSG00000101638.12	ENST00000538168	hsa-miR-641	46679115	46679121	7mer-m8	46679114	46679140	155	-22.28
CAediting_86358	chr1_109598906_+	ENSG00000101638.12	ENST00000538168	hsa-miR-197-5p	46679717	46679724	8mer-1a	46679717	46679740	149	-18.65
CAediting_77128	chr1_85133844_+	ENSG00000101638.12	ENST00000538168	hsa-miR-4423-3p	46669349	46669355	7mer-m8	46669348	46669367	144	-14.68
CAediting_77128	chr1_85133844_+	ENSG00000101638.12	ENST00000538168	hsa-miR-4423-3p	46676545	46676551	7mer-m8	46676544	46676564	150	-17.01
CAediting_1399425	chr20_1392958_-	ENSG00000101638.12	ENST00000538168	hsa-miR-6869-5p	46676768	46676774	7mer-m8	46676767	46676787	154	-25.22
CAediting_396018	chr5_1062918_-	ENSG00000101638.12	ENST00000538168	hsa-miR-4635	46669294	46669300	7mer-m8	46669293	46669313	140	-16.79
CAediting_442554	chr5_154685830_+	ENSG00000101638.12	ENST00000538168	hsa-miR-1303	46669669	46669675	7mer-m8	46669668	46669689	154	-19.73
CAediting_580943	chr7_100356700_+	ENSG00000101638.12	ENST00000538168	hsa-miR-6840-3p	46671698	46671704	7mer-m8	46671697	46671718	140	-18.63
CAediting_524911	chr7_5495852_-	ENSG00000101638.12	ENST00000538168	hsa-miR-589-3p	46668940	46668946	7mer-m8	46668939	46668962	146	-22.97
CAediting_524911	chr7_5495852_-	ENSG00000101638.12	ENST00000538168	hsa-miR-589-3p	46668118	46668124	7mer-m8	46668117	46668142	149	-15.7
CAediting_524911	chr7_5495852_-	ENSG00000101638.12	ENST00000538168	hsa-miR-589-3p	46678498	46678504	7mer-m8	46678497	46678520	140	-20.82
CAediting_524911	chr7_5495852_-	ENSG00000101638.12	ENST00000538168	hsa-miR-589-3p	46672745	46672751	7mer-m8	46672744	46672766	161	-21.96
CAediting_573000	chr7_92204081_-	ENSG00000101638.12	ENST00000538168	hsa-miR-1285-5p	46670096	46670102	7mer-m8	46670095	46670116	147	-14.88
CAediting_573001	chr7_92204086_-	ENSG00000101638.12	ENST00000538168	hsa-miR-1285-5p	46671799	46671805	7mer-m8	46671798	46671819	143	-18.65
CAediting_468389	chr6_31355314_-	ENSG00000101638.12	ENST00000538168	hsa-miR-6891-5p	46669835	46669841	7mer-m8	46669834	46669852	156	-23.58
CAediting_468389	chr6_31355314_-	ENSG00000101638.12	ENST00000538168	hsa-miR-6891-5p	46677172	46677178	7mer-m8	46677171	46677189	145	-18.87
CAediting_1524209	chrX_134546392_-	ENSG00000101638.12	ENST00000538168	hsa-miR-503-5p	46671865	46671870	6mer	46671864	46671885	146	-21.41

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_442554	chr5_154685830_+	ENSG00000101638.12	ENST00000538168	hsa-miR-1303	46671962	46671968	7mer-m8	46671961	46671982	142	-12.56
CAediting_86358	chr1_109598906_+	ENSG00000101638.12	ENST00000538168	hsa-miR-197-5p	46673657	46673663	7mer-m8	46673656	46673678	140	-13.12
CAediting_393	chr1_1167164_+	ENSG00000101638.12	ENST00000538168	hsa-miR-200b-3p	46668641	46668647	7mer-m8	46668640	46668662	146	-11.4
CAediting_1306323	chr19_13836462_-	ENSG00000101638.12	ENST00000538168	hsa-miR-27a-3p	46678966	46678972	7mer-1a	46678966	46678984	140	-20.17
CAediting_1306323	chr19_13836462_-	ENSG00000101638.12	ENST00000538168	hsa-miR-27a-3p	46667920	46667926	7mer-m8	46667919	46667938	148	-11.92
CAediting_1368054	chr19_46709310_-	ENSG00000101638.12	ENST00000538168	hsa-miR-320e	46667965	46667971	7mer-m8	46667964	46667981	145	-12.66
CAediting_1368054	chr19_46709310_-	ENSG00000101638.12	ENST00000538168	hsa-miR-320e	46676950	46676956	7mer-m8	46676949	46676966	140	-13.42
CAediting_1368054	chr19_46709310_-	ENSG00000101638.12	ENST00000538168	hsa-miR-320e	46675953	46675958	6mer	46675952	46675969	143	-17.14
CAediting_1368054	chr19_46709310_-	ENSG00000101638.12	ENST00000538168	hsa-miR-320e	46671780	46671786	7mer-m8	46671779	46671800	147	-22.04
CAediting_77128	chr1_85133844_+	ENSG00000101638.12	ENST00000538168	hsa-miR-4423-3p	46671650	46671657	8mer-1a	46671650	46671670	147	-10.08
CAediting_1054808	chr15_66496985_-	ENSG00000101638.12	ENST00000538168	hsa-miR-4512	46677176	46677181	6mer	46677175	46677198	142	-20.73
CAediting_1054808	chr15_66496985_-	ENSG00000101638.12	ENST00000538168	hsa-miR-4512	46679679	46679685	7mer-m8	46679678	46679699	148	-15.18
CAediting_1229413	chr17_67471544_+	ENSG00000101638.12	ENST00000538168	hsa-miR-548aa	46673278	46673284	7mer-m8	46673277	46673297	144	-7.54
CAediting_1229414	chr17_67471546_+	ENSG00000101638.12	ENST00000538168	hsa-miR-548aa	46673278	46673284	7mer-m8	46673277	46673297	144	-7.54
CAediting_1229413	chr17_67471544_+	ENSG00000101638.12	ENST00000538168	hsa-miR-548aa	46671471	46671477	7mer-m8	46671470	46671494	148	-13.14
CAediting_1229414	chr17_67471546_+	ENSG00000101638.12	ENST00000538168	hsa-miR-548aa	46671471	46671477	7mer-m8	46671470	46671494	148	-13.14
CAediting_1229415	chr17_67471547_+	ENSG00000101638.12	ENST00000538168	hsa-miR-548aa	46671471	46671477	7mer-m8	46671470	46671494	148	-13.14
CAediting_228905	chr2_188297554_+	ENSG00000101638.12	ENST00000538168	hsa-miR-561-3p	46678336	46678342	7mer-m8	46678335	46678360	141	-10.81
CAediting_228905	chr2_188297554_+	ENSG00000101638.12	ENST00000538168	hsa-miR-561-3p	46673104	46673111	8mer-1a	46673104	46673123	141	-3.82
CAediting_524911	chr7_5495852_-	ENSG00000101638.12	ENST00000538168	hsa-miR-589-3p	46668008	46668014	7mer-m8	46668007	46668030	150	-13.86
CAediting_524911	chr7_5495852_-	ENSG00000101638.12	ENST00000538168	hsa-miR-589-3p	46671870	46671876	7mer-m8	46671869	46671891	150	-17.87
CAediting_748296	chr10_51299626_+	ENSG00000101638.12	ENST00000538168	hsa-miR-605-3p	46674646	46674652	7mer-m8	46674645	46674666	140	-14.02
CAediting_980496	chr14_31014685_-	ENSG00000101638.12	ENST00000538168	hsa-miR-624-3p	46672417	46672423	7mer-m8	46672416	46672440	146	-17.06
CAediting_980496	chr14_31014685_-	ENSG00000101638.12	ENST00000538168	hsa-miR-624-3p	46671562	46671568	7mer-m8	46671561	46671581	140	-19.5
CAediting_1351755	chr19_40282625_-	ENSG00000101638.12	ENST00000538168	hsa-miR-641	46678553	46678558	6mer	46678552	46678574	149	-17.65
CAediting_1351755	chr19_40282625_-	ENSG00000101638.12	ENST00000538168	hsa-miR-641	46676712	46676718	7mer-m8	46676711	46676732	144	-10.5
CAediting_1351755	chr19_40282625_-	ENSG00000101638.12	ENST00000538168	hsa-miR-641	46679380	46679387	8mer-1a	46679380	46679402	153	-17.95
CAediting_1351755	chr19_40282625_-	ENSG00000101638.12	ENST00000538168	hsa-miR-641	46679176	46679181	6mer	46679175	46679198	140	-16.29
CAediting_580943	chr7_100356700_+	ENSG00000101638.12	ENST00000538168	hsa-miR-6840-3p	46674528	46674534	7mer-m8	46674527	46674548	143	-17.88
CAediting_580943	chr7_100356700_+	ENSG00000101638.12	ENST00000538168	hsa-miR-6840-3p	46673992	46673998	7mer-m8	46673991	46674012	140	-19.45
CAediting_1399425	chr20_1392958_-	ENSG00000101638.12	ENST00000538168	hsa-miR-6869-5p	46670571	46670578	8mer-1a	46670571	46670593	149	-18.24
CAediting_468389	chr6_31355314_-	ENSG00000101638.12	ENST00000538168	hsa-miR-6891-5p	46669382	46669388	7mer-m8	46669381	46669399	145	-17.98
CAediting_468389	chr6_31355314_-	ENSG00000101638.12	ENST00000538168	hsa-miR-6891-5p	46674826	46674831	6mer	46674821	46674838	151	-27.25

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for ST8SIA5

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST

ENST type

RNA structure without RNA A-to-I editing.

RNA structure with RNA A-to-I editing.

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID

ENST

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

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Relation with ADAR for ST8SIA5

Correlation between ADAR gene expression and RNA editing frequency

Cancer	CAeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
LGG	CAediting_1263155	chr18_46670590_-	.	.	.	.	0.0310001003342972	0.194619960095741
LGG	CAediting_1263157	chr18_46670659_-	.	.	2.01457276848972e-05	0.433065552880131	1.68903139721625e-05	0.436642950822586

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Relation with cancer stages for ST8SIA5

Correlation between Cancer stages and RNA editing frequency

Cancer

Stage_type

CAeditomID

position

P-val

Coeff.

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Relation with survival for ST8SIA5

Correlation between RNA editing and survival

Cancer	CAeditomID	position	KMpvalue	Coxpvalue	CoxHR
LGG	CAediting_1263157	chr18_46670659_-	0.0166974919626511	0.00817494	0.0218911
LGG	CAediting_1263161	chr18_46670704_-	0.00543903375635746	0.0318104	0.00738075

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RelatedDrugs for ST8SIA5

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for ST8SIA5

Diseases associated with this gene.
(DisGeNet 7.0)

Gene

Disease ID

Disease name

# pubmeds

Source

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene