Home

Download

Statistics

Examples

Help

Contact

Editing gene: TRA2A (CAeditome ID:29896)

Gene summary for TRA2A

Gene summary

Gene information	Gene symbol	TRA2A
	Gene ID	29896
	Gene name	transformer 2 alpha homolog
	Synonyms	AWMS1\|HSU53209
	Cytomap	7p15.3
	Type of gene	protein-coding
	Description	transformer-2 protein homolog alphaTRA-2 alphaTRA2-alphaTra2alphahtra-2 alphaputative MAPK activating protein PM24transformer-2 alphatransformer-2 protein homolog A
	Modification date	20210518
	UniProtAcc	Q13595
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene	GO ID	GO term	PubMed ID
TRA2A	GO:0000398	Transformer-2 protein homolog alpha	9546399
TRA2A	GO:0005634	Transformer-2 protein homolog alpha	9546399
TRA2A	GO:0005654	Transformer-2 protein homolog alpha	0000052
TRA2A	GO:0005730	Transformer-2 protein homolog alpha	0000052
TRA2A	GO:0043231	Transformer-2 protein homolog alpha	0000052

Top

RNA A-to-I events for TRA2A

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000164548.9

RNA A-to-I editing events in Cancer.

CAediting_531998(23506904, -), CAediting_531999(23506914, -), CAediting_532000(23506920, -), CAediting_532001(23506924, -), CAediting_532002(23506932, -), CAediting_532003(23506981, -), CAediting_532004(23507042, -), CAediting_532005(23507161, -), CAediting_532006(23507186, -), CAediting_532007(23507190, -), CAediting_532008(23507197, -), CAediting_532009(23507203, -), CAediting_532010(23507210, -), CAediting_532011(23507237, -), CAediting_532012(23507238, -), CAediting_532013(23507246, -), CAediting_532014(23507260, -), CAediting_532015(23508366, -), CAediting_532016(23508384, -), CAediting_532017(23508392, -), CAediting_532018(23508400, -), CAediting_532019(23508424, -), CAediting_532020(23508427, -), CAediting_532021(23508432, -), CAediting_532022(23508450, -), CAediting_532023(23508557, -), CAediting_532024(23508566, -), CAediting_532025(23508580, -), CAediting_532026(23508606, -), CAediting_532027(23508659, -), CAediting_532028(23508734, -), CAediting_532029(23508740, -), CAediting_532030(23508758, -), CAediting_532031(23508767, -), CAediting_532032(23508857, -), CAediting_532033(23509044, -), CAediting_532034(23509073, -), CAediting_532035(23509092, -), CAediting_532036(23509109, -), CAediting_532037(23509620, -), CAediting_532038(23509782, -), CAediting_532039(23509788, -), CAediting_532040(23509822, -), CAediting_532041(23509904, -), CAediting_532042(23509931, -), CAediting_532043(23509969, -), CAediting_532044(23510333, -), CAediting_532045(23510398, -), CAediting_532046(23510422, -), CAediting_532047(23510468, -), CAediting_532048(23510478, -), CAediting_532049(23510479, -), CAediting_532050(23510546, -), CAediting_532051(23510547, -), CAediting_532052(23510595, -), CAediting_532053(23510600, -), CAediting_532054(23510620, -), CAediting_532055(23511115, -), CAediting_532056(23511128, -), CAediting_532057(23511627, -), CAediting_532058(23511633, -), CAediting_532059(23512245, -), CAediting_532060(23512297, -), CAediting_532061(23512306, -), CAediting_532062(23512316, -), CAediting_532063(23512323, -), CAediting_532064(23512359, -), CAediting_532065(23512360, -), CAediting_532066(23512362, -), CAediting_532067(23512402, -), CAediting_532068(23512570, -), CAediting_532069(23512587, -), CAediting_532070(23512597, -), CAediting_532071(23512730, -), CAediting_532072(23513383, -), CAediting_532073(23513535, -), CAediting_532074(23513540, -), CAediting_532075(23513571, -), CAediting_532076(23514128, -), CAediting_532077(23514136, -), CAediting_532078(23514182, -), CAediting_532079(23514205, -), CAediting_532080(23514206, -), CAediting_532081(23514240, -), CAediting_532082(23514250, -), CAediting_532083(23514657, -), CAediting_532084(23514678, -), CAediting_532085(23514679, -), CAediting_532086(23514693, -), CAediting_532087(23515358, -), CAediting_532088(23515368, -), CAediting_532089(23515378, -), CAediting_532090(23515386, -), CAediting_532091(23515394, -), CAediting_532092(23515397, -), CAediting_532093(23515399, -), CAediting_532094(23515404, -), CAediting_532095(23515406, -), CAediting_532096(23515407, -), CAediting_532097(23515408, -), CAediting_532098(23515409, -), CAediting_532099(23515410, -), CAediting_532100(23515451, -), CAediting_532101(23515467, -), CAediting_532102(23515489, -), CAediting_532103(23515490, -), CAediting_532104(23515635, -), CAediting_532105(23515638, -), CAediting_532106(23515674, -), CAediting_532107(23515677, -), CAediting_532108(23515692, -), CAediting_532109(23515706, -), CAediting_532110(23515762, -), CAediting_532111(23515764, -), CAediting_532112(23515779, -), CAediting_532113(23515795, -), CAediting_532114(23515819, -), CAediting_532115(23515825, -), CAediting_532116(23515827, -), CAediting_532117(23515918, -), CAediting_532118(23515970, -), CAediting_532119(23515972, -), CAediting_532120(23516006, -), CAediting_532121(23516023, -), CAediting_532122(23516024, -), CAediting_532123(23516034, -), CAediting_532124(23516133, -), CAediting_532125(23516853, -), CAediting_532126(23516916, -), CAediting_532127(23516928, -), CAediting_532128(23516942, -), CAediting_532129(23516968, -), CAediting_532130(23516986, -), CAediting_532131(23516996, -), CAediting_532132(23516999, -), CAediting_532133(23517224, -), CAediting_532134(23517226, -), CAediting_532135(23517301, -), CAediting_532136(23517379, -), CAediting_532137(23517442, -), CAediting_532138(23517790, -), CAediting_532139(23517803, -), CAediting_532140(23518024, -), CAediting_532141(23518044, -), CAediting_532142(23518045, -), CAediting_532143(23518048, -), CAediting_532144(23518054, -), CAediting_532145(23518059, -), CAediting_532146(23518077, -), CAediting_532147(23518103, -), CAediting_532148(23518119, -), CAediting_532149(23518121, -), CAediting_532150(23518155, -), CAediting_532151(23518158, -), CAediting_532152(23518166, -), CAediting_532153(23518168, -), CAediting_532154(23518178, -), CAediting_532155(23518179, -), CAediting_532156(23518215, -), CAediting_532157(23518431, -), CAediting_532158(23518575, -), CAediting_532159(23518773, -), CAediting_532160(23518777, -), CAediting_532161(23518781, -), CAediting_532162(23518790, -), CAediting_532163(23518796, -), CAediting_532164(23518806, -), CAediting_532165(23518814, -), CAediting_532166(23518817, -), CAediting_532167(23518824, -), CAediting_532168(23518853, -), CAediting_532169(23518854, -), CAediting_532170(23518856, -), CAediting_532171(23518857, -), CAediting_532172(23518860, -), CAediting_532173(23518863, -), CAediting_532174(23518864, -), CAediting_532175(23518865, -), CAediting_532176(23518866, -), CAediting_532177(23518869, -), CAediting_532178(23518882, -), CAediting_532179(23518890, -), CAediting_532180(23518891, -), CAediting_532181(23518911, -), CAediting_532182(23518914, -), CAediting_532183(23518963, -), CAediting_532184(23518969, -), CAediting_532185(23519128, -), CAediting_532186(23519204, -), CAediting_532187(23519226, -), CAediting_532188(23519229, -), CAediting_532189(23519244, -), CAediting_532190(23519249, -), CAediting_532191(23519264, -), CAediting_532192(23519266, -), CAediting_532193(23519270, -), CAediting_532194(23519282, -), CAediting_532195(23519311, -), CAediting_532196(23519312, -), CAediting_532197(23519971, -), CAediting_532198(23520057, -), CAediting_532199(23520058, -), CAediting_532200(23520061, -), CAediting_532201(23520116, -), CAediting_532202(23520130, -), CAediting_532203(23520133, -), CAediting_532204(23520134, -), CAediting_532205(23520153, -), CAediting_532206(23520748, -), CAediting_532207(23520764, -), CAediting_532208(23520785, -), CAediting_532209(23520789, -), CAediting_532210(23520790, -), CAediting_532211(23520798, -), CAediting_532212(23520799, -), CAediting_532213(23520804, -), CAediting_532214(23520808, -), CAediting_532215(23520821, -), CAediting_532216(23520825, -), CAediting_532217(23520831, -), CAediting_532218(23520837, -), CAediting_532219(23520857, -), CAediting_532220(23520861, -), CAediting_532221(23520862, -), CAediting_532222(23520866, -), CAediting_532223(23520868, -), CAediting_532224(23520872, -), CAediting_532225(23520875, -), CAediting_532226(23520886, -), CAediting_532227(23520887, -), CAediting_532228(23520896, -), CAediting_532229(23520909, -), CAediting_532230(23520911, -), CAediting_532231(23520917, -), CAediting_532232(23520935, -), CAediting_532233(23520948, -), CAediting_532234(23520949, -), CAediting_532235(23520959, -), CAediting_532236(23520963, -), CAediting_532237(23520965, -), CAediting_532238(23520966, -), CAediting_532239(23520972, -), CAediting_532240(23524241, -), CAediting_532241(23524286, -), CAediting_532242(23524322, -), CAediting_532243(23524339, -), CAediting_532244(23524344, -), CAediting_532245(23524348, -), CAediting_532246(23524463, -), CAediting_532247(23524803, -), CAediting_532248(23524885, -), CAediting_532249(23525684, -), CAediting_532250(23525730, -), CAediting_532251(23525745, -), CAediting_532252(23525752, -), CAediting_532253(23525763, -), CAediting_532254(23528305, -), CAediting_532255(23528317, -), CAediting_532256(23528409, -), CAediting_532257(23528434, -), CAediting_532258(23528753, -), CAediting_532259(23528766, -), CAediting_532260(23528774, -), CAediting_532261(23528783, -), CAediting_532262(23528796, -), CAediting_532263(23529332, -), CAediting_532264(23529344, -), CAediting_532265(23529372, -), CAediting_532266(23529398, -), CAediting_532267(23529442, -), CAediting_532268(23529463, -),

Top

RNA editing positional annotations for TRA2A using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_531998	chr7_23506904_-	intronic
CAediting_531999	chr7_23506914_-	intronic
CAediting_532000	chr7_23506920_-	intronic
CAediting_532001	chr7_23506924_-	intronic
CAediting_532002	chr7_23506932_-	intronic
CAediting_532003	chr7_23506981_-	intronic
CAediting_532004	chr7_23507042_-	intronic
CAediting_532005	chr7_23507161_-	ncRNA_exonic
CAediting_532006	chr7_23507186_-	ncRNA_exonic
CAediting_532007	chr7_23507190_-	ncRNA_exonic
CAediting_532008	chr7_23507197_-	ncRNA_exonic
CAediting_532009	chr7_23507203_-	ncRNA_exonic
CAediting_532010	chr7_23507210_-	ncRNA_exonic
CAediting_532011	chr7_23507237_-	ncRNA_exonic
CAediting_532012	chr7_23507238_-	ncRNA_exonic
CAediting_532013	chr7_23507246_-	ncRNA_exonic
CAediting_532014	chr7_23507260_-	ncRNA_exonic
CAediting_532015	chr7_23508366_-	ncRNA_intronic
CAediting_532016	chr7_23508384_-	ncRNA_intronic
CAediting_532017	chr7_23508392_-	ncRNA_intronic
CAediting_532018	chr7_23508400_-	ncRNA_intronic
CAediting_532019	chr7_23508424_-	ncRNA_intronic
CAediting_532020	chr7_23508427_-	ncRNA_intronic
CAediting_532021	chr7_23508432_-	ncRNA_intronic
CAediting_532022	chr7_23508450_-	ncRNA_intronic
CAediting_532023	chr7_23508557_-	ncRNA_intronic
CAediting_532024	chr7_23508566_-	ncRNA_intronic
CAediting_532025	chr7_23508580_-	ncRNA_intronic
CAediting_532026	chr7_23508606_-	ncRNA_intronic
CAediting_532027	chr7_23508659_-	ncRNA_intronic
CAediting_532028	chr7_23508734_-	ncRNA_intronic
CAediting_532029	chr7_23508740_-	ncRNA_intronic
CAediting_532030	chr7_23508758_-	ncRNA_intronic
CAediting_532031	chr7_23508767_-	ncRNA_intronic
CAediting_532032	chr7_23508857_-	ncRNA_intronic
CAediting_532033	chr7_23509044_-	ncRNA_intronic
CAediting_532034	chr7_23509073_-	ncRNA_intronic
CAediting_532035	chr7_23509092_-	ncRNA_intronic
CAediting_532036	chr7_23509109_-	ncRNA_intronic
CAediting_532037	chr7_23509620_-	ncRNA_intronic
CAediting_532038	chr7_23509782_-	ncRNA_intronic
CAediting_532039	chr7_23509788_-	ncRNA_intronic
CAediting_532040	chr7_23509822_-	ncRNA_intronic
CAediting_532041	chr7_23509904_-	ncRNA_intronic
CAediting_532042	chr7_23509931_-	ncRNA_intronic
CAediting_532043	chr7_23509969_-	ncRNA_intronic
CAediting_532044	chr7_23510333_-	ncRNA_intronic
CAediting_532045	chr7_23510398_-	ncRNA_intronic
CAediting_532046	chr7_23510422_-	ncRNA_intronic
CAediting_532047	chr7_23510468_-	ncRNA_intronic
CAediting_532048	chr7_23510478_-	ncRNA_intronic
CAediting_532049	chr7_23510479_-	ncRNA_intronic
CAediting_532050	chr7_23510546_-	ncRNA_intronic
CAediting_532051	chr7_23510547_-	ncRNA_intronic
CAediting_532052	chr7_23510595_-	ncRNA_intronic
CAediting_532053	chr7_23510600_-	ncRNA_intronic
CAediting_532054	chr7_23510620_-	ncRNA_intronic
CAediting_532055	chr7_23511115_-	ncRNA_intronic
CAediting_532056	chr7_23511128_-	ncRNA_intronic
CAediting_532057	chr7_23511627_-	ncRNA_intronic
CAediting_532058	chr7_23511633_-	ncRNA_intronic
CAediting_532059	chr7_23512245_-	ncRNA_intronic
CAediting_532060	chr7_23512297_-	ncRNA_intronic
CAediting_532061	chr7_23512306_-	ncRNA_intronic
CAediting_532062	chr7_23512316_-	ncRNA_intronic
CAediting_532063	chr7_23512323_-	ncRNA_intronic
CAediting_532064	chr7_23512359_-	ncRNA_intronic
CAediting_532065	chr7_23512360_-	ncRNA_intronic
CAediting_532066	chr7_23512362_-	ncRNA_intronic
CAediting_532067	chr7_23512402_-	ncRNA_intronic
CAediting_532068	chr7_23512570_-	ncRNA_intronic
CAediting_532069	chr7_23512587_-	ncRNA_intronic
CAediting_532070	chr7_23512597_-	ncRNA_intronic
CAediting_532071	chr7_23512730_-	ncRNA_intronic
CAediting_532072	chr7_23513383_-	ncRNA_intronic
CAediting_532073	chr7_23513535_-	ncRNA_intronic
CAediting_532074	chr7_23513540_-	ncRNA_intronic
CAediting_532075	chr7_23513571_-	ncRNA_intronic
CAediting_532076	chr7_23514128_-	ncRNA_intronic
CAediting_532077	chr7_23514136_-	ncRNA_intronic
CAediting_532078	chr7_23514182_-	ncRNA_intronic
CAediting_532079	chr7_23514205_-	ncRNA_intronic
CAediting_532080	chr7_23514206_-	ncRNA_intronic
CAediting_532081	chr7_23514240_-	ncRNA_intronic
CAediting_532082	chr7_23514250_-	ncRNA_intronic
CAediting_532083	chr7_23514657_-	ncRNA_intronic
CAediting_532084	chr7_23514678_-	ncRNA_intronic
CAediting_532085	chr7_23514679_-	ncRNA_intronic
CAediting_532086	chr7_23514693_-	ncRNA_intronic
CAediting_532087	chr7_23515358_-	ncRNA_intronic
CAediting_532088	chr7_23515368_-	ncRNA_intronic
CAediting_532089	chr7_23515378_-	ncRNA_intronic
CAediting_532090	chr7_23515386_-	ncRNA_intronic
CAediting_532091	chr7_23515394_-	ncRNA_intronic
CAediting_532092	chr7_23515397_-	ncRNA_intronic
CAediting_532093	chr7_23515399_-	ncRNA_intronic
CAediting_532094	chr7_23515404_-	ncRNA_intronic
CAediting_532095	chr7_23515406_-	ncRNA_intronic
CAediting_532096	chr7_23515407_-	ncRNA_intronic
CAediting_532097	chr7_23515408_-	ncRNA_intronic
CAediting_532098	chr7_23515409_-	ncRNA_intronic
CAediting_532099	chr7_23515410_-	ncRNA_intronic
CAediting_532100	chr7_23515451_-	ncRNA_intronic
CAediting_532101	chr7_23515467_-	ncRNA_intronic
CAediting_532102	chr7_23515489_-	ncRNA_intronic
CAediting_532103	chr7_23515490_-	ncRNA_intronic
CAediting_532104	chr7_23515635_-	ncRNA_intronic
CAediting_532105	chr7_23515638_-	ncRNA_intronic
CAediting_532106	chr7_23515674_-	ncRNA_intronic
CAediting_532107	chr7_23515677_-	ncRNA_intronic
CAediting_532108	chr7_23515692_-	ncRNA_intronic
CAediting_532109	chr7_23515706_-	ncRNA_intronic
CAediting_532110	chr7_23515762_-	ncRNA_intronic
CAediting_532111	chr7_23515764_-	ncRNA_intronic
CAediting_532112	chr7_23515779_-	ncRNA_intronic
CAediting_532113	chr7_23515795_-	ncRNA_intronic
CAediting_532114	chr7_23515819_-	ncRNA_intronic
CAediting_532115	chr7_23515825_-	ncRNA_intronic
CAediting_532116	chr7_23515827_-	ncRNA_intronic
CAediting_532117	chr7_23515918_-	ncRNA_intronic
CAediting_532118	chr7_23515970_-	ncRNA_intronic
CAediting_532119	chr7_23515972_-	ncRNA_intronic
CAediting_532120	chr7_23516006_-	ncRNA_intronic
CAediting_532121	chr7_23516023_-	ncRNA_intronic
CAediting_532122	chr7_23516024_-	ncRNA_intronic
CAediting_532123	chr7_23516034_-	ncRNA_intronic
CAediting_532124	chr7_23516133_-	ncRNA_intronic
CAediting_532125	chr7_23516853_-	ncRNA_intronic
CAediting_532126	chr7_23516916_-	ncRNA_intronic
CAediting_532127	chr7_23516928_-	ncRNA_intronic
CAediting_532128	chr7_23516942_-	ncRNA_intronic
CAediting_532129	chr7_23516968_-	ncRNA_intronic
CAediting_532130	chr7_23516986_-	ncRNA_intronic
CAediting_532131	chr7_23516996_-	ncRNA_intronic
CAediting_532132	chr7_23516999_-	ncRNA_intronic
CAediting_532133	chr7_23517224_-	ncRNA_intronic
CAediting_532134	chr7_23517226_-	ncRNA_intronic
CAediting_532135	chr7_23517301_-	ncRNA_intronic
CAediting_532136	chr7_23517379_-	ncRNA_intronic
CAediting_532137	chr7_23517442_-	ncRNA_intronic
CAediting_532138	chr7_23517790_-	ncRNA_intronic
CAediting_532139	chr7_23517803_-	ncRNA_intronic
CAediting_532140	chr7_23518024_-	ncRNA_intronic
CAediting_532141	chr7_23518044_-	ncRNA_intronic
CAediting_532142	chr7_23518045_-	ncRNA_intronic
CAediting_532143	chr7_23518048_-	ncRNA_intronic
CAediting_532144	chr7_23518054_-	ncRNA_intronic
CAediting_532145	chr7_23518059_-	ncRNA_intronic
CAediting_532146	chr7_23518077_-	ncRNA_intronic
CAediting_532147	chr7_23518103_-	ncRNA_intronic
CAediting_532148	chr7_23518119_-	ncRNA_intronic
CAediting_532149	chr7_23518121_-	ncRNA_intronic
CAediting_532150	chr7_23518155_-	ncRNA_intronic
CAediting_532151	chr7_23518158_-	ncRNA_intronic
CAediting_532152	chr7_23518166_-	ncRNA_intronic
CAediting_532153	chr7_23518168_-	ncRNA_intronic
CAediting_532154	chr7_23518178_-	ncRNA_intronic
CAediting_532155	chr7_23518179_-	ncRNA_intronic
CAediting_532156	chr7_23518215_-	ncRNA_intronic
CAediting_532157	chr7_23518431_-	ncRNA_intronic
CAediting_532158	chr7_23518575_-	ncRNA_intronic
CAediting_532159	chr7_23518773_-	ncRNA_intronic
CAediting_532160	chr7_23518777_-	ncRNA_intronic
CAediting_532161	chr7_23518781_-	ncRNA_intronic
CAediting_532162	chr7_23518790_-	ncRNA_intronic
CAediting_532163	chr7_23518796_-	ncRNA_intronic
CAediting_532164	chr7_23518806_-	ncRNA_intronic
CAediting_532165	chr7_23518814_-	ncRNA_intronic
CAediting_532166	chr7_23518817_-	ncRNA_intronic
CAediting_532167	chr7_23518824_-	ncRNA_intronic
CAediting_532168	chr7_23518853_-	ncRNA_intronic
CAediting_532169	chr7_23518854_-	ncRNA_intronic
CAediting_532170	chr7_23518856_-	ncRNA_intronic
CAediting_532171	chr7_23518857_-	ncRNA_intronic
CAediting_532172	chr7_23518860_-	ncRNA_intronic
CAediting_532173	chr7_23518863_-	ncRNA_intronic
CAediting_532174	chr7_23518864_-	ncRNA_intronic
CAediting_532175	chr7_23518865_-	ncRNA_intronic
CAediting_532176	chr7_23518866_-	ncRNA_intronic
CAediting_532177	chr7_23518869_-	ncRNA_intronic
CAediting_532178	chr7_23518882_-	ncRNA_intronic
CAediting_532179	chr7_23518890_-	ncRNA_intronic
CAediting_532180	chr7_23518891_-	ncRNA_intronic
CAediting_532181	chr7_23518911_-	ncRNA_intronic
CAediting_532182	chr7_23518914_-	ncRNA_intronic
CAediting_532183	chr7_23518963_-	ncRNA_intronic
CAediting_532184	chr7_23518969_-	ncRNA_intronic
CAediting_532185	chr7_23519128_-	ncRNA_intronic
CAediting_532186	chr7_23519204_-	ncRNA_intronic
CAediting_532187	chr7_23519226_-	ncRNA_intronic
CAediting_532188	chr7_23519229_-	ncRNA_intronic
CAediting_532189	chr7_23519244_-	ncRNA_intronic
CAediting_532190	chr7_23519249_-	ncRNA_intronic
CAediting_532191	chr7_23519264_-	ncRNA_intronic
CAediting_532192	chr7_23519266_-	ncRNA_intronic
CAediting_532193	chr7_23519270_-	ncRNA_intronic
CAediting_532194	chr7_23519282_-	ncRNA_intronic
CAediting_532195	chr7_23519311_-	ncRNA_intronic
CAediting_532196	chr7_23519312_-	ncRNA_intronic
CAediting_532197	chr7_23519971_-	ncRNA_intronic
CAediting_532198	chr7_23520057_-	ncRNA_intronic
CAediting_532199	chr7_23520058_-	ncRNA_intronic
CAediting_532200	chr7_23520061_-	ncRNA_intronic
CAediting_532201	chr7_23520116_-	ncRNA_intronic
CAediting_532202	chr7_23520130_-	ncRNA_intronic
CAediting_532203	chr7_23520133_-	ncRNA_intronic
CAediting_532204	chr7_23520134_-	ncRNA_intronic
CAediting_532205	chr7_23520153_-	ncRNA_intronic
CAediting_532206	chr7_23520748_-	ncRNA_intronic
CAediting_532207	chr7_23520764_-	ncRNA_intronic
CAediting_532208	chr7_23520785_-	ncRNA_intronic
CAediting_532209	chr7_23520789_-	ncRNA_intronic
CAediting_532210	chr7_23520790_-	ncRNA_intronic
CAediting_532211	chr7_23520798_-	ncRNA_intronic
CAediting_532212	chr7_23520799_-	ncRNA_intronic
CAediting_532213	chr7_23520804_-	ncRNA_intronic
CAediting_532214	chr7_23520808_-	ncRNA_intronic
CAediting_532215	chr7_23520821_-	ncRNA_intronic
CAediting_532216	chr7_23520825_-	ncRNA_intronic
CAediting_532217	chr7_23520831_-	ncRNA_intronic
CAediting_532218	chr7_23520837_-	ncRNA_intronic
CAediting_532219	chr7_23520857_-	ncRNA_intronic
CAediting_532220	chr7_23520861_-	ncRNA_intronic
CAediting_532221	chr7_23520862_-	ncRNA_intronic
CAediting_532222	chr7_23520866_-	ncRNA_intronic
CAediting_532223	chr7_23520868_-	ncRNA_intronic
CAediting_532224	chr7_23520872_-	ncRNA_intronic
CAediting_532225	chr7_23520875_-	ncRNA_intronic
CAediting_532226	chr7_23520886_-	ncRNA_intronic
CAediting_532227	chr7_23520887_-	ncRNA_intronic
CAediting_532228	chr7_23520896_-	ncRNA_intronic
CAediting_532229	chr7_23520909_-	ncRNA_intronic
CAediting_532230	chr7_23520911_-	ncRNA_intronic
CAediting_532231	chr7_23520917_-	ncRNA_intronic
CAediting_532232	chr7_23520935_-	ncRNA_intronic
CAediting_532233	chr7_23520948_-	ncRNA_intronic
CAediting_532234	chr7_23520949_-	ncRNA_intronic
CAediting_532235	chr7_23520959_-	ncRNA_intronic
CAediting_532236	chr7_23520963_-	ncRNA_intronic
CAediting_532237	chr7_23520965_-	ncRNA_intronic
CAediting_532238	chr7_23520966_-	ncRNA_intronic
CAediting_532239	chr7_23520972_-	ncRNA_intronic
CAediting_532240	chr7_23524241_-	ncRNA_intronic
CAediting_532241	chr7_23524286_-	ncRNA_intronic
CAediting_532242	chr7_23524322_-	ncRNA_intronic
CAediting_532243	chr7_23524339_-	ncRNA_intronic
CAediting_532244	chr7_23524344_-	ncRNA_intronic
CAediting_532245	chr7_23524348_-	ncRNA_intronic
CAediting_532246	chr7_23524463_-	ncRNA_intronic
CAediting_532247	chr7_23524803_-	ncRNA_intronic
CAediting_532248	chr7_23524885_-	ncRNA_intronic
CAediting_532249	chr7_23525684_-	ncRNA_intronic
CAediting_532250	chr7_23525730_-	ncRNA_intronic
CAediting_532251	chr7_23525745_-	ncRNA_intronic
CAediting_532252	chr7_23525752_-	ncRNA_intronic
CAediting_532253	chr7_23525763_-	ncRNA_intronic
CAediting_532254	chr7_23528305_-	ncRNA_intronic
CAediting_532255	chr7_23528317_-	ncRNA_intronic
CAediting_532256	chr7_23528409_-	ncRNA_intronic
CAediting_532257	chr7_23528434_-	ncRNA_intronic
CAediting_532258	chr7_23528753_-	ncRNA_intronic
CAediting_532259	chr7_23528766_-	ncRNA_intronic
CAediting_532260	chr7_23528774_-	ncRNA_intronic
CAediting_532261	chr7_23528783_-	ncRNA_intronic
CAediting_532262	chr7_23528796_-	ncRNA_intronic
CAediting_532263	chr7_23529332_-	ncRNA_intronic
CAediting_532264	chr7_23529344_-	ncRNA_intronic
CAediting_532265	chr7_23529372_-	ncRNA_intronic
CAediting_532266	chr7_23529398_-	ncRNA_intronic
CAediting_532267	chr7_23529442_-	ncRNA_intronic
CAediting_532268	chr7_23529463_-	ncRNA_intronic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_531998	chr7_23506904_-	SINE	Alu	AluYc
CAediting_531999	chr7_23506914_-	SINE	Alu	AluYc
CAediting_532000	chr7_23506920_-	SINE	Alu	AluYc
CAediting_532001	chr7_23506924_-	SINE	Alu	AluYc
CAediting_532002	chr7_23506932_-	SINE	Alu	AluYc
CAediting_532003	chr7_23506981_-	SINE	Alu	AluYc
CAediting_532004	chr7_23507042_-	SINE	Alu	AluYc
CAediting_532005	chr7_23507161_-	SINE	Alu	AluSz6
CAediting_532006	chr7_23507186_-	SINE	Alu	AluSz6
CAediting_532007	chr7_23507190_-	SINE	Alu	AluSz6
CAediting_532008	chr7_23507197_-	SINE	Alu	AluSz6
CAediting_532009	chr7_23507203_-	SINE	Alu	AluSz6
CAediting_532010	chr7_23507210_-	SINE	Alu	AluSz6
CAediting_532011	chr7_23507237_-	SINE	Alu	AluSz6
CAediting_532012	chr7_23507238_-	SINE	Alu	AluSz6
CAediting_532013	chr7_23507246_-	SINE	Alu	AluSz6
CAediting_532014	chr7_23507260_-	SINE	Alu	AluSz6
CAediting_532015	chr7_23508366_-	SINE	Alu	AluJb
CAediting_532016	chr7_23508384_-	SINE	Alu	AluJb
CAediting_532017	chr7_23508392_-	SINE	Alu	AluJb
CAediting_532018	chr7_23508400_-	SINE	Alu	AluJb
CAediting_532019	chr7_23508424_-	SINE	Alu	AluJb
CAediting_532020	chr7_23508427_-	SINE	Alu	AluJb
CAediting_532021	chr7_23508432_-	SINE	Alu	AluJb
CAediting_532022	chr7_23508450_-	SINE	Alu	AluJb
CAediting_532023	chr7_23508557_-	SINE	Alu	AluSc
CAediting_532024	chr7_23508566_-	SINE	Alu	AluSc
CAediting_532025	chr7_23508580_-	SINE	Alu	AluSc
CAediting_532026	chr7_23508606_-	SINE	Alu	AluSc
CAediting_532027	chr7_23508659_-	SINE	Alu	AluSc
CAediting_532028	chr7_23508734_-	SINE	Alu	AluSc
CAediting_532029	chr7_23508740_-	SINE	Alu	AluSc
CAediting_532030	chr7_23508758_-	SINE	Alu	AluSc
CAediting_532031	chr7_23508767_-	SINE	Alu	AluSc
CAediting_532032	chr7_23508857_-	SINE	Alu	AluJb
CAediting_532033	chr7_23509044_-	SINE	Alu	AluJo
CAediting_532034	chr7_23509073_-	SINE	Alu	AluJo
CAediting_532035	chr7_23509092_-	SINE	Alu	AluJo
CAediting_532036	chr7_23509109_-	SINE	Alu	AluJo
CAediting_532037	chr7_23509620_-	SINE	Alu	AluSc
CAediting_532038	chr7_23509782_-	SINE	Alu	AluSz
CAediting_532039	chr7_23509788_-	SINE	Alu	AluSz
CAediting_532040	chr7_23509822_-	SINE	Alu	AluSz
CAediting_532041	chr7_23509904_-	SINE	Alu	AluSz
CAediting_532042	chr7_23509931_-	SINE	Alu	AluSz
CAediting_532043	chr7_23509969_-	SINE	Alu	AluSz
CAediting_532044	chr7_23510333_-	SINE	Alu	AluSx1
CAediting_532045	chr7_23510398_-	SINE	Alu	AluSx1
CAediting_532046	chr7_23510422_-	SINE	Alu	AluSx1
CAediting_532047	chr7_23510468_-	SINE	Alu	AluSx1
CAediting_532048	chr7_23510478_-	SINE	Alu	AluSx1
CAediting_532049	chr7_23510479_-	SINE	Alu	AluSx1
CAediting_532050	chr7_23510546_-	SINE	Alu	AluSx1
CAediting_532051	chr7_23510547_-	SINE	Alu	AluSx1
CAediting_532052	chr7_23510595_-	SINE	Alu	AluSx1
CAediting_532053	chr7_23510600_-	SINE	Alu	AluSx1
CAediting_532054	chr7_23510620_-	SINE	Alu	AluSx1
CAediting_532055	chr7_23511115_-	SINE	Alu	AluY
CAediting_532056	chr7_23511128_-	SINE	Alu	AluY
CAediting_532057	chr7_23511627_-	SINE	Alu	AluJr
CAediting_532058	chr7_23511633_-	SINE	Alu	AluJr
CAediting_532059	chr7_23512245_-	SINE	Alu	AluJr
CAediting_532060	chr7_23512297_-	SINE	Alu	AluJr
CAediting_532061	chr7_23512306_-	SINE	Alu	AluJr
CAediting_532062	chr7_23512316_-	SINE	Alu	AluJr
CAediting_532063	chr7_23512323_-	SINE	Alu	AluJr
CAediting_532064	chr7_23512359_-	SINE	Alu	AluJr
CAediting_532065	chr7_23512360_-	SINE	Alu	AluJr
CAediting_532066	chr7_23512362_-	SINE	Alu	AluJr
CAediting_532067	chr7_23512402_-	SINE	Alu	AluJr
CAediting_532068	chr7_23512570_-	SINE	Alu	AluY
CAediting_532069	chr7_23512587_-	SINE	Alu	AluY
CAediting_532070	chr7_23512597_-	SINE	Alu	AluY
CAediting_532071	chr7_23512730_-	SINE	Alu	AluY
CAediting_532072	chr7_23513383_-	SINE	Alu	AluSq2
CAediting_532073	chr7_23513535_-	SINE	Alu	AluSq2
CAediting_532074	chr7_23513540_-	SINE	Alu	AluSq2
CAediting_532075	chr7_23513571_-	SINE	Alu	AluSq2
CAediting_532076	chr7_23514128_-	SINE	Alu	AluSp
CAediting_532077	chr7_23514136_-	SINE	Alu	AluSp
CAediting_532078	chr7_23514182_-	SINE	Alu	AluSp
CAediting_532079	chr7_23514205_-	SINE	Alu	AluSp
CAediting_532080	chr7_23514206_-	SINE	Alu	AluSp
CAediting_532081	chr7_23514240_-	SINE	Alu	AluSp
CAediting_532082	chr7_23514250_-	SINE	Alu	AluSp
CAediting_532083	chr7_23514657_-	SINE	Alu	AluJb
CAediting_532084	chr7_23514678_-	SINE	Alu	AluJb
CAediting_532085	chr7_23514679_-	SINE	Alu	AluJb
CAediting_532086	chr7_23514693_-	SINE	Alu	AluJb
CAediting_532087	chr7_23515358_-	SINE	Alu	AluYc
CAediting_532088	chr7_23515368_-	SINE	Alu	AluYc
CAediting_532089	chr7_23515378_-	SINE	Alu	AluYc
CAediting_532090	chr7_23515386_-	SINE	Alu	AluYc
CAediting_532091	chr7_23515394_-	SINE	Alu	AluYc
CAediting_532092	chr7_23515397_-	SINE	Alu	AluYc
CAediting_532093	chr7_23515399_-	SINE	Alu	AluYc
CAediting_532094	chr7_23515404_-	SINE	Alu	AluYc
CAediting_532095	chr7_23515406_-	SINE	Alu	AluYc
CAediting_532096	chr7_23515407_-	SINE	Alu	AluYc
CAediting_532097	chr7_23515408_-	SINE	Alu	AluYc
CAediting_532098	chr7_23515409_-	SINE	Alu	AluYc
CAediting_532099	chr7_23515410_-	SINE	Alu	AluYc
CAediting_532100	chr7_23515451_-	SINE	Alu	AluYc
CAediting_532101	chr7_23515467_-	SINE	Alu	AluYc
CAediting_532102	chr7_23515489_-	SINE	Alu	AluYc
CAediting_532103	chr7_23515490_-	SINE	Alu	AluYc
CAediting_532104	chr7_23515635_-	SINE	Alu	AluSx
CAediting_532105	chr7_23515638_-	SINE	Alu	AluSx
CAediting_532106	chr7_23515674_-	SINE	Alu	AluSx
CAediting_532107	chr7_23515677_-	SINE	Alu	AluSx
CAediting_532108	chr7_23515692_-	SINE	Alu	AluSx
CAediting_532109	chr7_23515706_-	SINE	Alu	AluSx
CAediting_532110	chr7_23515762_-	SINE	Alu	AluSx
CAediting_532111	chr7_23515764_-	SINE	Alu	AluSx
CAediting_532112	chr7_23515779_-	SINE	Alu	AluSx
CAediting_532113	chr7_23515795_-	SINE	Alu	AluSx
CAediting_532114	chr7_23515819_-	SINE	Alu	AluSx
CAediting_532115	chr7_23515825_-	SINE	Alu	AluSx
CAediting_532116	chr7_23515827_-	SINE	Alu	AluSx
CAediting_532117	chr7_23515918_-	SINE	Alu	AluSx
CAediting_532118	chr7_23515970_-	SINE	Alu	AluSx
CAediting_532119	chr7_23515972_-	SINE	Alu	AluSx
CAediting_532120	chr7_23516006_-	SINE	Alu	AluSx
CAediting_532121	chr7_23516023_-	SINE	Alu	AluSx
CAediting_532122	chr7_23516024_-	SINE	Alu	AluSx
CAediting_532123	chr7_23516034_-	SINE	Alu	AluSx
CAediting_532124	chr7_23516133_-	SINE	Alu	AluSx
CAediting_532125	chr7_23516853_-	SINE	Alu	AluSc
CAediting_532126	chr7_23516916_-	SINE	Alu	AluSc
CAediting_532127	chr7_23516928_-	SINE	Alu	AluSc
CAediting_532128	chr7_23516942_-	SINE	Alu	AluSc
CAediting_532129	chr7_23516968_-	SINE	Alu	AluSc
CAediting_532130	chr7_23516986_-	SINE	Alu	AluSc
CAediting_532131	chr7_23516996_-	SINE	Alu	AluSc
CAediting_532132	chr7_23516999_-	SINE	Alu	AluSc
CAediting_532133	chr7_23517224_-	SINE	Alu	AluY
CAediting_532134	chr7_23517226_-	SINE	Alu	AluY
CAediting_532135	chr7_23517301_-	SINE	Alu	AluY
CAediting_532136	chr7_23517379_-	SINE	Alu	AluY
CAediting_532137	chr7_23517442_-	SINE	Alu	AluY
CAediting_532138	chr7_23517790_-	SINE	Alu	AluSc
CAediting_532139	chr7_23517803_-	SINE	Alu	AluSc
CAediting_532140	chr7_23518024_-	SINE	Alu	AluSz
CAediting_532141	chr7_23518044_-	SINE	Alu	AluSz
CAediting_532142	chr7_23518045_-	SINE	Alu	AluSz
CAediting_532143	chr7_23518048_-	SINE	Alu	AluSz
CAediting_532144	chr7_23518054_-	SINE	Alu	AluSz
CAediting_532145	chr7_23518059_-	SINE	Alu	AluSz
CAediting_532146	chr7_23518077_-	SINE	Alu	AluSz
CAediting_532147	chr7_23518103_-	SINE	Alu	AluSz
CAediting_532148	chr7_23518119_-	SINE	Alu	AluSz
CAediting_532149	chr7_23518121_-	SINE	Alu	AluSz
CAediting_532150	chr7_23518155_-	SINE	Alu	AluSz
CAediting_532151	chr7_23518158_-	SINE	Alu	AluSz
CAediting_532152	chr7_23518166_-	SINE	Alu	AluSz
CAediting_532153	chr7_23518168_-	SINE	Alu	AluSz
CAediting_532154	chr7_23518178_-	SINE	Alu	AluSz
CAediting_532155	chr7_23518179_-	SINE	Alu	AluSz
CAediting_532157	chr7_23518431_-	SINE	Alu	AluSg
CAediting_532158	chr7_23518575_-	SINE	Alu	AluSg
CAediting_532159	chr7_23518773_-	SINE	Alu	AluSz
CAediting_532160	chr7_23518777_-	SINE	Alu	AluSz
CAediting_532161	chr7_23518781_-	SINE	Alu	AluSz
CAediting_532162	chr7_23518790_-	SINE	Alu	AluSz
CAediting_532163	chr7_23518796_-	SINE	Alu	AluSz
CAediting_532164	chr7_23518806_-	SINE	Alu	AluSz
CAediting_532165	chr7_23518814_-	SINE	Alu	AluSz
CAediting_532166	chr7_23518817_-	SINE	Alu	AluSz
CAediting_532167	chr7_23518824_-	SINE	Alu	AluSz
CAediting_532168	chr7_23518853_-	SINE	Alu	AluSz
CAediting_532169	chr7_23518854_-	SINE	Alu	AluSz
CAediting_532170	chr7_23518856_-	SINE	Alu	AluSz
CAediting_532171	chr7_23518857_-	SINE	Alu	AluSz
CAediting_532172	chr7_23518860_-	SINE	Alu	AluSz
CAediting_532173	chr7_23518863_-	SINE	Alu	AluSz
CAediting_532174	chr7_23518864_-	SINE	Alu	AluSz
CAediting_532175	chr7_23518865_-	SINE	Alu	AluSz
CAediting_532176	chr7_23518866_-	SINE	Alu	AluSz
CAediting_532177	chr7_23518869_-	SINE	Alu	AluSz
CAediting_532178	chr7_23518882_-	SINE	Alu	AluSz
CAediting_532179	chr7_23518890_-	SINE	Alu	AluSz
CAediting_532180	chr7_23518891_-	SINE	Alu	AluSz
CAediting_532181	chr7_23518911_-	SINE	Alu	AluSz
CAediting_532182	chr7_23518914_-	SINE	Alu	AluSz
CAediting_532183	chr7_23518963_-	SINE	Alu	AluSz
CAediting_532184	chr7_23518969_-	SINE	Alu	AluSz
CAediting_532185	chr7_23519128_-	SINE	Alu	AluSc5
CAediting_532186	chr7_23519204_-	SINE	Alu	AluSc5
CAediting_532187	chr7_23519226_-	SINE	Alu	AluSc5
CAediting_532188	chr7_23519229_-	SINE	Alu	AluSc5
CAediting_532189	chr7_23519244_-	SINE	Alu	AluSc5
CAediting_532190	chr7_23519249_-	SINE	Alu	AluSc5
CAediting_532191	chr7_23519264_-	SINE	Alu	AluSc5
CAediting_532192	chr7_23519266_-	SINE	Alu	AluSc5
CAediting_532193	chr7_23519270_-	SINE	Alu	AluSc5
CAediting_532194	chr7_23519282_-	SINE	Alu	AluSc5
CAediting_532195	chr7_23519311_-	SINE	Alu	AluSc5
CAediting_532196	chr7_23519312_-	SINE	Alu	AluSc5
CAediting_532197	chr7_23519971_-	SINE	Alu	AluSx
CAediting_532198	chr7_23520057_-	SINE	Alu	AluSx
CAediting_532199	chr7_23520058_-	SINE	Alu	AluSx
CAediting_532200	chr7_23520061_-	SINE	Alu	AluSx
CAediting_532201	chr7_23520116_-	SINE	Alu	AluSx
CAediting_532202	chr7_23520130_-	SINE	Alu	AluSx
CAediting_532203	chr7_23520133_-	SINE	Alu	AluSx
CAediting_532204	chr7_23520134_-	SINE	Alu	AluSx
CAediting_532205	chr7_23520153_-	SINE	Alu	AluSx
CAediting_532206	chr7_23520748_-	SINE	Alu	AluSx1
CAediting_532207	chr7_23520764_-	SINE	Alu	AluSx1
CAediting_532208	chr7_23520785_-	SINE	Alu	AluSx1
CAediting_532209	chr7_23520789_-	SINE	Alu	AluSx1
CAediting_532210	chr7_23520790_-	SINE	Alu	AluSx1
CAediting_532211	chr7_23520798_-	SINE	Alu	AluSx1
CAediting_532212	chr7_23520799_-	SINE	Alu	AluSx1
CAediting_532213	chr7_23520804_-	SINE	Alu	AluSx1
CAediting_532214	chr7_23520808_-	SINE	Alu	AluSx1
CAediting_532215	chr7_23520821_-	SINE	Alu	AluSx1
CAediting_532216	chr7_23520825_-	SINE	Alu	AluSx1
CAediting_532217	chr7_23520831_-	SINE	Alu	AluSx1
CAediting_532218	chr7_23520837_-	SINE	Alu	AluSx1
CAediting_532219	chr7_23520857_-	SINE	Alu	AluSx1
CAediting_532220	chr7_23520861_-	SINE	Alu	AluSx1
CAediting_532221	chr7_23520862_-	SINE	Alu	AluSx1
CAediting_532222	chr7_23520866_-	SINE	Alu	AluSx1
CAediting_532223	chr7_23520868_-	SINE	Alu	AluSx1
CAediting_532224	chr7_23520872_-	SINE	Alu	AluSx1
CAediting_532225	chr7_23520875_-	SINE	Alu	AluSx1
CAediting_532226	chr7_23520886_-	SINE	Alu	AluSx1
CAediting_532227	chr7_23520887_-	SINE	Alu	AluSx1
CAediting_532228	chr7_23520896_-	SINE	Alu	AluSx1
CAediting_532229	chr7_23520909_-	SINE	Alu	AluSx1
CAediting_532230	chr7_23520911_-	SINE	Alu	AluSx1
CAediting_532231	chr7_23520917_-	SINE	Alu	AluSx1
CAediting_532232	chr7_23520935_-	SINE	Alu	AluSx1
CAediting_532233	chr7_23520948_-	SINE	Alu	AluSx1
CAediting_532234	chr7_23520949_-	SINE	Alu	AluSx1
CAediting_532235	chr7_23520959_-	SINE	Alu	AluSx1
CAediting_532236	chr7_23520963_-	SINE	Alu	AluSx1
CAediting_532237	chr7_23520965_-	SINE	Alu	AluSx1
CAediting_532238	chr7_23520966_-	SINE	Alu	AluSx1
CAediting_532239	chr7_23520972_-	SINE	Alu	AluSx1
CAediting_532240	chr7_23524241_-	SINE	Alu	AluSz
CAediting_532241	chr7_23524286_-	SINE	Alu	AluSz
CAediting_532242	chr7_23524322_-	SINE	Alu	AluSz
CAediting_532243	chr7_23524339_-	SINE	Alu	AluSz
CAediting_532244	chr7_23524344_-	SINE	Alu	AluSz
CAediting_532245	chr7_23524348_-	SINE	Alu	AluSz
CAediting_532246	chr7_23524463_-	SINE	Alu	AluSz
CAediting_532247	chr7_23524803_-	SINE	Alu	AluSg
CAediting_532248	chr7_23524885_-	SINE	Alu	AluSg
CAediting_532249	chr7_23525684_-	SINE	Alu	AluSx1
CAediting_532250	chr7_23525730_-	SINE	Alu	AluSx1
CAediting_532251	chr7_23525745_-	SINE	Alu	AluSx1
CAediting_532252	chr7_23525752_-	SINE	Alu	AluSx1
CAediting_532253	chr7_23525763_-	SINE	Alu	AluSx1
CAediting_532254	chr7_23528305_-	SINE	Alu	AluSc
CAediting_532255	chr7_23528317_-	SINE	Alu	AluSc
CAediting_532256	chr7_23528409_-	SINE	Alu	AluSc
CAediting_532257	chr7_23528434_-	SINE	Alu	AluSc
CAediting_532258	chr7_23528753_-	SINE	Alu	AluSx
CAediting_532259	chr7_23528766_-	SINE	Alu	AluSx
CAediting_532260	chr7_23528774_-	SINE	Alu	AluSx
CAediting_532261	chr7_23528783_-	SINE	Alu	AluSx
CAediting_532262	chr7_23528796_-	SINE	Alu	AluSx
CAediting_532263	chr7_23529332_-	SINE	Alu	AluSz
CAediting_532264	chr7_23529344_-	SINE	Alu	AluSz
CAediting_532265	chr7_23529372_-	SINE	Alu	AluSz
CAediting_532266	chr7_23529398_-	SINE	Alu	AluSz
CAediting_532267	chr7_23529442_-	SINE	Alu	AluSz
CAediting_532268	chr7_23529463_-	SINE	Alu	AluSz

Top

RNA A-to-I editing events in the alternative splicing sites for TRA2A

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000164548.9.TRA2A.

Correlation between RNA A-to-I editing and PSI for ENSG00000164548.9.TRA2A.

Top

Differntial gene expression between RNA A-to-I edited versus non-edited samples for TRA2A

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

Top

Protein coding region RNA A-to-I editings for TRA2A

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

Top

The effects of the RNA editing to the miRNA binding sites for TRA2A

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_86358	chr1_109598906_+	ENSG00000164548.9	ENST00000297071	hsa-miR-197-5p	23505394	23505401	8mer-1a	23505394	23505417	160	-24.26
CAediting_86358	chr1_109598906_+	ENSG00000164548.9	ENST00000392502	hsa-miR-197-5p	23505394	23505401	8mer-1a	23505394	23505417	160	-24.26
CAediting_86358	chr1_109598906_+	ENSG00000164548.9	ENST00000538367	hsa-miR-197-5p	23505394	23505401	8mer-1a	23505394	23505417	160	-24.26
CAediting_86358	chr1_109598906_+	ENSG00000164548.9	ENST00000621813	hsa-miR-197-5p	23505394	23505401	8mer-1a	23505394	23505417	160	-24.26
CAediting_442554	chr5_154685830_+	ENSG00000164548.9	ENST00000448549	hsa-miR-1303	23516395	23516401	7mer-m8	23516395	23516415	156	-18.62

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

Differentially expressed gene-miRNA network

Top

The effects of the RNA editing to the stability of the RNA structures for TRA2A

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST	ENST type	RNA structure without RNA A-to-I editing.	RNA structure with RNA A-to-I editing.
ENST00000494255.4	retained_intron

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID	ENST	Editing_Position	MFE_withoneAI	MFE_withoutAI	MFE_withmultipleAI
CAediting_532005	ENST00000494255.4	chr7_23507161_-	-457.00	-457.00	-467.60
CAediting_532006	ENST00000494255.4	chr7_23507186_-	-457.00	-457.00	-467.60
CAediting_532007	ENST00000494255.4	chr7_23507190_-	-457.00	-457.00	-467.60
CAediting_532008	ENST00000494255.4	chr7_23507197_-	-457.00	-457.00	-467.60
CAediting_532009	ENST00000494255.4	chr7_23507203_-	-456.60	-457.00	-467.60
CAediting_532010	ENST00000494255.4	chr7_23507210_-	-456.30	-457.00	-467.60
CAediting_532011	ENST00000494255.4	chr7_23507237_-	-457.30	-457.00	-467.60
CAediting_532012	ENST00000494255.4	chr7_23507238_-	-458.40	-457.00	-467.60
CAediting_532013	ENST00000494255.4	chr7_23507246_-	-459.00	-457.00	-467.60
CAediting_532014	ENST00000494255.4	chr7_23507260_-	-459.00	-457.00	-467.60

Top

Relation with ADAR for TRA2A

Correlation between ADAR gene expression and RNA editing frequency

Cancer

CAeditomID

position

ADAR1 (p-val)

ADAR1 (coeff.)

ADAR2 (p-val)

ADAR2 (coeff.)

ADAR3 (p-val)

ADAR3 (coeff.)

Top

Relation with cancer stages for TRA2A

Correlation between Cancer stages and RNA editing frequency

Cancer	Stage_type	CAeditomID	position	P-val	Coeff.
ESCA	clinical_stage	CAediting_532233	chr7_23520948_-	0.0104896127596701	0.602429393553148
ESCA	pathologic_stage	CAediting_532233	chr7_23520948_-	0.0243532016847329	0.29048069887712

Top

Relation with survival for TRA2A

Correlation between RNA editing and survival

Cancer

CAeditomID

position

KMpvalue

Coxpvalue

CoxHR

Top

RelatedDrugs for TRA2A

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

Top

RelatedDiseases for TRA2A

Diseases associated with this gene.
(DisGeNet 7.0)

Gene	Disease ID	Disease name	# pubmeds	Source
TRA2A	C0037274	Dermatologic disorders	1	CTD_human
TRA2A	C0274861	Arsenic Poisoning, Inorganic	1	CTD_human
TRA2A	C0274862	Nervous System, Organic Arsenic Poisoning	1	CTD_human
TRA2A	C0311375	Arsenic Poisoning	1	CTD_human
TRA2A	C0751851	Arsenic Encephalopathy	1	CTD_human
TRA2A	C0751852	Arsenic Induced Polyneuropathy	1	CTD_human

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene