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Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with cancer stages

Soverview

Relation with survival state

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene

Editing gene: GTF2H3 (CAeditome ID:2967)

Gene summary for GTF2H3

check button Gene summary
Gene informationGene symbol

GTF2H3

Gene ID

2967

Gene namegeneral transcription factor IIH subunit 3
SynonymsBTF2|P34|TFB4|TFIIH
Cytomap

12q24.31

Type of geneprotein-coding
Descriptiongeneral transcription factor IIH subunit 3TFIIH basal transcription factor complex p34 subunitbasic transcription factor 2 34 kDa subunitgeneral transcription factor IIH, polypeptide 3, 34kDa
Modification date20210518
UniProtAcc

Q13889

Context

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID
GTF2H3

GO:0016251

General transcription factor IIH subunit 3

27193682

GTF2H3

GO:0006366

General transcription factor IIH subunit 3

27193682

GTF2H3

GO:0006366

General transcription factor IIH subunit 3

9852112

GTF2H3

GO:0005634

General transcription factor IIH subunit 3

27193682

GTF2H3

GO:0005654

General transcription factor IIH subunit 3

0000052

GTF2H3

GO:0000438

General transcription factor IIH subunit 3

27193682

GTF2H3

GO:0005669

General transcription factor IIH subunit 3

27193682

GTF2H3

GO:0005675

General transcription factor IIH subunit 3

9852112

GTF2H3

GO:0097550

General transcription factor IIH subunit 3

27193682


Top

RNA A-to-I events for GTF2H3

check buttonRNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.
all structure

check button RNA editing frequencies across 33 cancers of gene: ENSG00000111358.12
boxplot

check button RNA A-to-I editing events in Cancer.
CAediting_946222(123634255, +), CAediting_946223(123645188, +), CAediting_946224(123647295, +), CAediting_946225(123651311, +), CAediting_946226(123651340, +), CAediting_946227(123651347, +), CAediting_946228(123651394, +), CAediting_946229(123651657, +), CAediting_946230(123651658, +), CAediting_946231(123651659, +), CAediting_946232(123651662, +), CAediting_946233(123651664, +), CAediting_946234(123651666, +), CAediting_946235(123651668, +), CAediting_946236(123651673, +), CAediting_946237(123651712, +), CAediting_946238(123651726, +), CAediting_946239(123651740, +), CAediting_946240(123651752, +), CAediting_946241(123653590, +), CAediting_946242(123656829, +), CAediting_946243(123656941, +), CAediting_946244(123656967, +), CAediting_946245(123656984, +), CAediting_946246(123658052, +), CAediting_946247(123658058, +), CAediting_946248(123658063, +), CAediting_946249(123658068, +), CAediting_946250(123658083, +), CAediting_946251(123658125, +), CAediting_946252(123658132, +), CAediting_946253(123658159, +), CAediting_946254(123658174, +), CAediting_946255(123658182, +), CAediting_946256(123658183, +), CAediting_946257(123658196, +), CAediting_946258(123658202, +), CAediting_946259(123658262, +), CAediting_946260(123658317, +), CAediting_946261(123658318, +), CAediting_946262(123658335, +), CAediting_946263(123659191, +), CAediting_946264(123659202, +), CAediting_946265(123659205, +), CAediting_946266(123659214, +), CAediting_946267(123659220, +), CAediting_946268(123659224, +), CAediting_946269(123659264, +), CAediting_946270(123659269, +), CAediting_946271(123659273, +), CAediting_946272(123659282, +), CAediting_946273(123659311, +), CAediting_946274(123659312, +), CAediting_946275(123659355, +), CAediting_946276(123661036, +), CAediting_946277(123661037, +), CAediting_946278(123661059, +), CAediting_946279(123661064, +), CAediting_946280(123661066, +), CAediting_946281(123661077, +), CAediting_946282(123661082, +), CAediting_946283(123661105, +), CAediting_946284(123661109, +), CAediting_946285(123661110, +), CAediting_946286(123661121, +), CAediting_946287(123661387, +), CAediting_946288(123661388, +), CAediting_946289(123661393, +), CAediting_946290(123661426, +), CAediting_946291(123661439, +), CAediting_946292(123661440, +), CAediting_946293(123661464, +), CAediting_946294(123661465, +), CAediting_946295(123661479, +), CAediting_946296(123661482, +), CAediting_946297(123661483, +), CAediting_946298(123661487, +), CAediting_946299(123661494, +), CAediting_946300(123661498, +), CAediting_946301(123661504, +), CAediting_946302(123661507, +), CAediting_946303(123661526, +), CAediting_946304(123661530, +), CAediting_946305(123661537, +), CAediting_946306(123661543, +), CAediting_946307(123661548, +), CAediting_946308(123661550, +), CAediting_946309(123661552, +), CAediting_946310(123661553, +), CAediting_946311(123661561, +), CAediting_946312(123661562, +), CAediting_946313(123661566, +), CAediting_946314(123661569, +), CAediting_946315(123661573, +), CAediting_946316(123661575, +), CAediting_946317(123661590, +), CAediting_946318(123661591, +), CAediting_946319(123661595, +), CAediting_946320(123661625, +), CAediting_946321(123661629, +), CAediting_946322(123661661, +), CAediting_946323(123661671, +), CAediting_946324(123661679, +), CAediting_946325(123661685, +), CAediting_946326(123661701, +), CAediting_946327(123661702, +), CAediting_946328(123661715, +), CAediting_946329(123661764, +), CAediting_946330(123661766, +), CAediting_946331(123661770, +), CAediting_946332(123661788, +), CAediting_946333(123661808, +), CAediting_946334(123661809, +), CAediting_946335(123661824, +), CAediting_946336(123661825, +), CAediting_946337(123661862, +), CAediting_946338(123661874, +), CAediting_946339(123661884, +), CAediting_946340(123661908, +), CAediting_946341(123661911, +), CAediting_946342(123661967, +), CAediting_946343(123661968, +), CAediting_946344(123661969, +), CAediting_946345(123661971, +), CAediting_946346(123661973, +), CAediting_946347(123661982, +), CAediting_946348(123662008, +), CAediting_946349(123662009, +), CAediting_946350(123662014, +), CAediting_946351(123662018, +), CAediting_946352(123662022, +), CAediting_946353(123662027, +), CAediting_946354(123662031, +), CAediting_946355(123662035, +), CAediting_946356(123662038, +), CAediting_946357(123662049, +), CAediting_946358(123662050, +), CAediting_946359(123662054, +), CAediting_946360(123662057, +), CAediting_946361(123662070, +), CAediting_946362(123662078, +), CAediting_946363(123662095, +), CAediting_946364(123662120, +), CAediting_946365(123662121, +), CAediting_946366(123662123, +), CAediting_946367(123662125, +), CAediting_946368(123662126, +),

Top

RNA editing positional annotations for GTF2H3 using Annovar

check button Protein coding RNA editing(s).
CAeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred

check button Gene structure information of RNA editing(s).
CAeditome IDPositionVariant type
CAediting_946222chr12_123634255_+ncRNA_intronic
CAediting_946223chr12_123645188_+ncRNA_intronic
CAediting_946224chr12_123647295_+ncRNA_intronic
CAediting_946225chr12_123651311_+ncRNA_intronic
CAediting_946226chr12_123651340_+ncRNA_intronic
CAediting_946227chr12_123651347_+ncRNA_intronic
CAediting_946228chr12_123651394_+ncRNA_intronic
CAediting_946229chr12_123651657_+ncRNA_intronic
CAediting_946230chr12_123651658_+ncRNA_intronic
CAediting_946231chr12_123651659_+ncRNA_intronic
CAediting_946232chr12_123651662_+ncRNA_intronic
CAediting_946233chr12_123651664_+ncRNA_intronic
CAediting_946234chr12_123651666_+ncRNA_intronic
CAediting_946235chr12_123651668_+ncRNA_intronic
CAediting_946236chr12_123651673_+ncRNA_intronic
CAediting_946237chr12_123651712_+ncRNA_intronic
CAediting_946238chr12_123651726_+ncRNA_intronic
CAediting_946239chr12_123651740_+ncRNA_intronic
CAediting_946240chr12_123651752_+ncRNA_intronic
CAediting_946241chr12_123653590_+ncRNA_intronic
CAediting_946242chr12_123656829_+intronic
CAediting_946243chr12_123656941_+intronic
CAediting_946244chr12_123656967_+intronic
CAediting_946245chr12_123656984_+intronic
CAediting_946246chr12_123658052_+intronic
CAediting_946247chr12_123658058_+intronic
CAediting_946248chr12_123658063_+intronic
CAediting_946249chr12_123658068_+intronic
CAediting_946250chr12_123658083_+intronic
CAediting_946251chr12_123658125_+intronic
CAediting_946252chr12_123658132_+intronic
CAediting_946253chr12_123658159_+intronic
CAediting_946254chr12_123658174_+intronic
CAediting_946255chr12_123658182_+intronic
CAediting_946256chr12_123658183_+intronic
CAediting_946257chr12_123658196_+intronic
CAediting_946258chr12_123658202_+intronic
CAediting_946259chr12_123658262_+intronic
CAediting_946260chr12_123658317_+intronic
CAediting_946261chr12_123658318_+intronic
CAediting_946262chr12_123658335_+intronic
CAediting_946263chr12_123659191_+intronic
CAediting_946264chr12_123659202_+intronic
CAediting_946265chr12_123659205_+intronic
CAediting_946266chr12_123659214_+intronic
CAediting_946267chr12_123659220_+intronic
CAediting_946268chr12_123659224_+intronic
CAediting_946269chr12_123659264_+intronic
CAediting_946270chr12_123659269_+intronic
CAediting_946271chr12_123659273_+intronic
CAediting_946272chr12_123659282_+intronic
CAediting_946273chr12_123659311_+intronic
CAediting_946274chr12_123659312_+intronic
CAediting_946275chr12_123659355_+intronic
CAediting_946276chr12_123661036_+UTR3
CAediting_946277chr12_123661037_+UTR3
CAediting_946278chr12_123661059_+UTR3
CAediting_946279chr12_123661064_+UTR3
CAediting_946280chr12_123661066_+UTR3
CAediting_946281chr12_123661077_+UTR3
CAediting_946282chr12_123661082_+UTR3
CAediting_946283chr12_123661105_+UTR3
CAediting_946284chr12_123661109_+UTR3
CAediting_946285chr12_123661110_+UTR3
CAediting_946286chr12_123661121_+UTR3
CAediting_946287chr12_123661387_+UTR3
CAediting_946288chr12_123661388_+UTR3
CAediting_946289chr12_123661393_+UTR3
CAediting_946290chr12_123661426_+UTR3
CAediting_946291chr12_123661439_+UTR3
CAediting_946292chr12_123661440_+UTR3
CAediting_946293chr12_123661464_+UTR3
CAediting_946294chr12_123661465_+UTR3
CAediting_946295chr12_123661479_+UTR3
CAediting_946296chr12_123661482_+UTR3
CAediting_946297chr12_123661483_+UTR3
CAediting_946298chr12_123661487_+UTR3
CAediting_946299chr12_123661494_+UTR3
CAediting_946300chr12_123661498_+UTR3
CAediting_946301chr12_123661504_+UTR3
CAediting_946302chr12_123661507_+UTR3
CAediting_946303chr12_123661526_+UTR3
CAediting_946304chr12_123661530_+UTR3
CAediting_946305chr12_123661537_+UTR3
CAediting_946306chr12_123661543_+UTR3
CAediting_946307chr12_123661548_+UTR3
CAediting_946308chr12_123661550_+UTR3
CAediting_946309chr12_123661552_+UTR3
CAediting_946310chr12_123661553_+UTR3
CAediting_946311chr12_123661561_+UTR3
CAediting_946312chr12_123661562_+UTR3
CAediting_946313chr12_123661566_+UTR3
CAediting_946314chr12_123661569_+UTR3
CAediting_946315chr12_123661573_+UTR3
CAediting_946316chr12_123661575_+UTR3
CAediting_946317chr12_123661590_+UTR3
CAediting_946318chr12_123661591_+UTR3
CAediting_946319chr12_123661595_+UTR3
CAediting_946320chr12_123661625_+UTR3
CAediting_946321chr12_123661629_+UTR3
CAediting_946322chr12_123661661_+UTR3
CAediting_946323chr12_123661671_+UTR3
CAediting_946324chr12_123661679_+UTR3
CAediting_946325chr12_123661685_+UTR3
CAediting_946326chr12_123661701_+UTR3
CAediting_946327chr12_123661702_+UTR3
CAediting_946328chr12_123661715_+UTR3
CAediting_946329chr12_123661764_+UTR3
CAediting_946330chr12_123661766_+UTR3
CAediting_946331chr12_123661770_+UTR3
CAediting_946332chr12_123661788_+UTR3
CAediting_946333chr12_123661808_+UTR3
CAediting_946334chr12_123661809_+UTR3
CAediting_946335chr12_123661824_+UTR3
CAediting_946336chr12_123661825_+UTR3
CAediting_946337chr12_123661862_+UTR3
CAediting_946338chr12_123661874_+UTR3
CAediting_946339chr12_123661884_+UTR3
CAediting_946340chr12_123661908_+UTR3
CAediting_946341chr12_123661911_+UTR3
CAediting_946342chr12_123661967_+UTR3
CAediting_946343chr12_123661968_+UTR3
CAediting_946344chr12_123661969_+UTR3
CAediting_946345chr12_123661971_+UTR3
CAediting_946346chr12_123661973_+UTR3
CAediting_946347chr12_123661982_+UTR3
CAediting_946348chr12_123662008_+UTR3
CAediting_946349chr12_123662009_+UTR3
CAediting_946350chr12_123662014_+UTR3
CAediting_946351chr12_123662018_+UTR3
CAediting_946352chr12_123662022_+UTR3
CAediting_946353chr12_123662027_+UTR3
CAediting_946354chr12_123662031_+UTR3
CAediting_946355chr12_123662035_+UTR3
CAediting_946356chr12_123662038_+UTR3
CAediting_946357chr12_123662049_+UTR3
CAediting_946358chr12_123662050_+UTR3
CAediting_946359chr12_123662054_+UTR3
CAediting_946360chr12_123662057_+UTR3
CAediting_946361chr12_123662070_+UTR3
CAediting_946362chr12_123662078_+UTR3
CAediting_946363chr12_123662095_+UTR3
CAediting_946364chr12_123662120_+UTR3
CAediting_946365chr12_123662121_+UTR3
CAediting_946366chr12_123662123_+UTR3
CAediting_946367chr12_123662125_+UTR3
CAediting_946368chr12_123662126_+UTR3

check button Repat-regional RNA editing(s).
CAeditome IDPositionRepeat familyRepeat sub familyRepeat name
CAediting_946222chr12_123634255_+SINEAluAluJr
CAediting_946223chr12_123645188_+SINEAluAluJb
CAediting_946224chr12_123647295_+SINEAluAluSz
CAediting_946225chr12_123651311_+SINEAluAluSx1
CAediting_946226chr12_123651340_+SINEAluAluSx1
CAediting_946227chr12_123651347_+SINEAluAluSx1
CAediting_946228chr12_123651394_+SINEAluAluSx1
CAediting_946229chr12_123651657_+SINEAluAluY
CAediting_946230chr12_123651658_+SINEAluAluY
CAediting_946231chr12_123651659_+SINEAluAluY
CAediting_946232chr12_123651662_+SINEAluAluY
CAediting_946233chr12_123651664_+SINEAluAluY
CAediting_946234chr12_123651666_+SINEAluAluY
CAediting_946235chr12_123651668_+SINEAluAluY
CAediting_946236chr12_123651673_+SINEAluAluY
CAediting_946237chr12_123651712_+SINEAluAluY
CAediting_946238chr12_123651726_+SINEAluAluY
CAediting_946239chr12_123651740_+SINEAluAluY
CAediting_946240chr12_123651752_+SINEAluAluY
CAediting_946241chr12_123653590_+SINEAluAluY
CAediting_946242chr12_123656829_+SINEAluAluJo
CAediting_946243chr12_123656941_+SINEAluAluJo
CAediting_946244chr12_123656967_+SINEAluAluJo
CAediting_946245chr12_123656984_+SINEAluAluJo
CAediting_946246chr12_123658052_+SINEAluAluJb
CAediting_946247chr12_123658058_+SINEAluAluJb
CAediting_946248chr12_123658063_+SINEAluAluJb
CAediting_946249chr12_123658068_+SINEAluAluJb
CAediting_946250chr12_123658083_+SINEAluAluJb
CAediting_946251chr12_123658125_+SINEAluAluJb
CAediting_946252chr12_123658132_+SINEAluAluJb
CAediting_946253chr12_123658159_+SINEAluAluJb
CAediting_946254chr12_123658174_+SINEAluAluJb
CAediting_946255chr12_123658182_+SINEAluAluJb
CAediting_946256chr12_123658183_+SINEAluAluJb
CAediting_946257chr12_123658196_+SINEAluAluJb
CAediting_946258chr12_123658202_+SINEAluAluJb
CAediting_946259chr12_123658262_+SINEAluAluSq2
CAediting_946260chr12_123658317_+SINEAluAluSq2
CAediting_946261chr12_123658318_+SINEAluAluSq2
CAediting_946262chr12_123658335_+SINEAluAluSq2
CAediting_946263chr12_123659191_+SINEAluAluSx
CAediting_946264chr12_123659202_+SINEAluAluSx
CAediting_946265chr12_123659205_+SINEAluAluSx
CAediting_946266chr12_123659214_+SINEAluAluSx
CAediting_946267chr12_123659220_+SINEAluAluSx
CAediting_946268chr12_123659224_+SINEAluAluSx
CAediting_946269chr12_123659264_+SINEAluAluSx
CAediting_946270chr12_123659269_+SINEAluAluSx
CAediting_946271chr12_123659273_+SINEAluAluSx
CAediting_946272chr12_123659282_+SINEAluAluSx
CAediting_946273chr12_123659311_+SINEAluAluSx
CAediting_946274chr12_123659312_+SINEAluAluSx
CAediting_946275chr12_123659355_+SINEAluAluSx
CAediting_946276chr12_123661036_+SINEAluAluJr4
CAediting_946277chr12_123661037_+SINEAluAluJr4
CAediting_946278chr12_123661059_+SINEAluAluJr4
CAediting_946279chr12_123661064_+SINEAluAluJr4
CAediting_946280chr12_123661066_+SINEAluAluJr4
CAediting_946281chr12_123661077_+SINEAluAluJr4
CAediting_946282chr12_123661082_+SINEAluAluJr4
CAediting_946283chr12_123661105_+SINEAluAluJr4
CAediting_946284chr12_123661109_+SINEAluAluJr4
CAediting_946285chr12_123661110_+SINEAluAluJr4
CAediting_946286chr12_123661121_+SINEAluAluJr4
CAediting_946287chr12_123661387_+SINEAluAluSx4
CAediting_946288chr12_123661388_+SINEAluAluSx4
CAediting_946289chr12_123661393_+SINEAluAluSx4
CAediting_946290chr12_123661426_+SINEAluAluSx4
CAediting_946291chr12_123661439_+SINEAluAluSx4
CAediting_946292chr12_123661440_+SINEAluAluSx4
CAediting_946293chr12_123661464_+SINEAluAluSx4
CAediting_946294chr12_123661465_+SINEAluAluSx4
CAediting_946295chr12_123661479_+SINEAluAluSx4
CAediting_946296chr12_123661482_+SINEAluAluSx4
CAediting_946297chr12_123661483_+SINEAluAluSx4
CAediting_946298chr12_123661487_+SINEAluAluSx4
CAediting_946299chr12_123661494_+SINEAluAluSx4
CAediting_946300chr12_123661498_+SINEAluAluSx4
CAediting_946301chr12_123661504_+SINEAluAluSx4
CAediting_946302chr12_123661507_+SINEAluAluSx4
CAediting_946303chr12_123661526_+SINEAluAluSx4
CAediting_946304chr12_123661530_+SINEAluAluSx4
CAediting_946305chr12_123661537_+SINEAluAluSx4
CAediting_946306chr12_123661543_+SINEAluAluSx4
CAediting_946307chr12_123661548_+SINEAluAluSx4
CAediting_946308chr12_123661550_+SINEAluAluSx4
CAediting_946309chr12_123661552_+SINEAluAluSx4
CAediting_946310chr12_123661553_+SINEAluAluSx4
CAediting_946311chr12_123661561_+SINEAluAluSx4
CAediting_946312chr12_123661562_+SINEAluAluSx4
CAediting_946313chr12_123661566_+SINEAluAluSx4
CAediting_946314chr12_123661569_+SINEAluAluSx4
CAediting_946315chr12_123661573_+SINEAluAluSx4
CAediting_946316chr12_123661575_+SINEAluAluSx4
CAediting_946317chr12_123661590_+SINEAluAluSx4
CAediting_946318chr12_123661591_+SINEAluAluSx4
CAediting_946319chr12_123661595_+SINEAluAluSx4
CAediting_946320chr12_123661625_+SINEAluAluSx4
CAediting_946321chr12_123661629_+SINEAluAluSx4
CAediting_946322chr12_123661661_+SINEAluAluSg4
CAediting_946323chr12_123661671_+SINEAluAluSg4
CAediting_946324chr12_123661679_+SINEAluAluSg4
CAediting_946325chr12_123661685_+SINEAluAluSg4
CAediting_946326chr12_123661701_+SINEAluAluSg4
CAediting_946327chr12_123661702_+SINEAluAluSg4
CAediting_946328chr12_123661715_+SINEAluAluSg4
CAediting_946329chr12_123661764_+SINEAluAluYc
CAediting_946330chr12_123661766_+SINEAluAluYc
CAediting_946331chr12_123661770_+SINEAluAluYc
CAediting_946332chr12_123661788_+SINEAluAluYc
CAediting_946333chr12_123661808_+SINEAluAluYc
CAediting_946334chr12_123661809_+SINEAluAluYc
CAediting_946335chr12_123661824_+SINEAluAluYc
CAediting_946336chr12_123661825_+SINEAluAluYc
CAediting_946337chr12_123661862_+SINEAluAluYc
CAediting_946338chr12_123661874_+SINEAluAluYc
CAediting_946339chr12_123661884_+SINEAluAluYc
CAediting_946340chr12_123661908_+SINEAluAluSq2
CAediting_946341chr12_123661911_+SINEAluAluSq2
CAediting_946342chr12_123661967_+SINEAluAluSq2
CAediting_946343chr12_123661968_+SINEAluAluSq2
CAediting_946344chr12_123661969_+SINEAluAluSq2
CAediting_946345chr12_123661971_+SINEAluAluSq2
CAediting_946346chr12_123661973_+SINEAluAluSq2
CAediting_946347chr12_123661982_+SINEAluAluSq2
CAediting_946348chr12_123662008_+SINEAluAluSq2
CAediting_946349chr12_123662009_+SINEAluAluSq2
CAediting_946350chr12_123662014_+SINEAluAluSq2
CAediting_946351chr12_123662018_+SINEAluAluSq2
CAediting_946352chr12_123662022_+SINEAluAluSq2
CAediting_946353chr12_123662027_+SINEAluAluSq2
CAediting_946354chr12_123662031_+SINEAluAluSq2
CAediting_946355chr12_123662035_+SINEAluAluSq2
CAediting_946356chr12_123662038_+SINEAluAluSq2
CAediting_946357chr12_123662049_+SINEAluAluSq2
CAediting_946358chr12_123662050_+SINEAluAluSq2
CAediting_946359chr12_123662054_+SINEAluAluSq2
CAediting_946360chr12_123662057_+SINEAluAluSq2
CAediting_946361chr12_123662070_+SINEAluAluSq2
CAediting_946362chr12_123662078_+SINEAluAluSq2
CAediting_946363chr12_123662095_+SINEAluAluSq2
CAediting_946364chr12_123662120_+SINEAluAluSq2
CAediting_946365chr12_123662121_+SINEAluAluSq2
CAediting_946366chr12_123662123_+SINEAluAluSq2
CAediting_946367chr12_123662125_+SINEAluAluSq2
CAediting_946368chr12_123662126_+SINEAluAluSq2

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RNA A-to-I editing events in the alternative splicing sites for GTF2H3

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeCAeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength
IRCAediting_946301chr12_123661504_+123661502:1236615105SS1+0iGAAGTAGCA-4.46GAGGTAGCA4.75
IRCAediting_946302chr12_123661507_+123661502:1236615105SS0+3iGAAGTAGCA-4.46GAAGTGGCA-11.04
IRCAediting_946316chr12_123661575_+123661574:1236615825SS2+0iGAGGTTGCA-5.84GGGGTTGCA-15.35
IRCAediting_946337chr12_123661862_+123661852:1236618743SS0+10iCTCCTGCCTCAGCCTCCCAAGTA-6.31CTCCTGCCTCGGCCTCCCAAGTA0.13
IRCAediting_946338chr12_123661874_+123661852:1236618743SS3+0iCTCCTGCCTCAGCCTCCCAAGTA-6.31CTCCTGCCTCAGCCTCCCAAGTG-5.84
IRCAediting_946357chr12_123662049_+123662044:1236620663SS0+15iGCTTGAACCCAGGAGGTGGAGGT-36.19GCTTGGACCCAGGAGGTGGAGGT-35.51
IRCAediting_946358chr12_123662050_+123662044:1236620663SS0+14iGCTTGAACCCAGGAGGTGGAGGT-36.19GCTTGAGCCCAGGAGGTGGAGGT-37.88
IRCAediting_946359chr12_123662054_+123662044:1236620663SS0+10iGCTTGAACCCAGGAGGTGGAGGT-36.19GCTTGAACCCGGGAGGTGGAGGT-31.68
IRCAediting_946360chr12_123662057_+123662044:1236620663SS0+7iGCTTGAACCCAGGAGGTGGAGGT-36.19GCTTGAACCCAGGGGGTGGAGGT-34.01

check button Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000111358.12.GTF2H3.
boxplot

check button Correlation between RNA A-to-I editing and PSI for ENSG00000111358.12.GTF2H3.
boxplot

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for GTF2H3

check button Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.
boxplot

check button Correlation between RNA A-to-I editing and gene expression.
boxplot

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for GTF2H3

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.


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The effects of the RNA editing to the miRNA binding sites for GTF2H3

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_946288chr12_123661388_+ENSG00000111358.12ENST00000618160hsa-miR-10394-5p1236613811236613877mer-m8123661363123661388149.00-28.25
CAediting_946288chr12_123661388_+ENSG00000111358.12ENST00000618160hsa-miR-12051236613811236613877mer-m8123661369123661388147.00-19.08
CAediting_946288chr12_123661388_+ENSG00000111358.12ENST00000618160hsa-miR-1288-3p1236613841236613907mer-m8123661371123661391140.00-14.53
CAediting_946288chr12_123661388_+ENSG00000111358.12ENST00000618160hsa-miR-31991236613851236613928mer-1a123661373123661392149.00-19.57
CAediting_946288chr12_123661388_+ENSG00000111358.12ENST00000618160hsa-miR-31991236613851236613928mer-1a123661373123661392149.00-19.57
CAediting_946288chr12_123661388_+ENSG00000111358.12ENST00000618160hsa-miR-44181236613821236613887mer-m8123661372123661389156.00-16.80
CAediting_946288chr12_123661388_+ENSG00000111358.12ENST00000618160hsa-miR-509-3-5p1236613821236613887mer-m8123661367123661389163.00-23.92
CAediting_946288chr12_123661388_+ENSG00000111358.12ENST00000618160hsa-miR-509-5p1236613821236613887mer-m8123661369123661389144.00-18.43
CAediting_946288chr12_123661388_+ENSG00000111358.12ENST00000618160hsa-miR-509-5p1236613821236613887mer-m8123661369123661389144.00-18.43
CAediting_946288chr12_123661388_+ENSG00000111358.12ENST00000618160hsa-miR-80521236613851236613928mer-1a123661374123661392159.00-30.77
CAediting_946304chr12_123661530_+ENSG00000111358.12ENST00000618160hsa-miR-1207-3p1236615231236615297mer-m8123661512123661530145.00-13.69
CAediting_946304chr12_123661530_+ENSG00000111358.12ENST00000618160hsa-miR-6461236615251236615317mer-m8123661513123661532148.00-21.05
CAediting_946306chr12_123661543_+ENSG00000111358.12ENST00000618160hsa-miR-6849-3p1236615361236615427mer-m8123661522123661543140.00-15.93
CAediting_946307chr12_123661548_+ENSG00000111358.12ENST00000618160hsa-miR-19761236615441236615518mer-1a123661531123661551149.00-24.39
CAediting_946307chr12_123661548_+ENSG00000111358.12ENST00000618160hsa-miR-6747-3p1236615421236615498mer-1a123661527123661549149.00-23.68
CAediting_946308chr12_123661550_+ENSG00000111358.12ENST00000618160hsa-miR-39381236615471236615537mer-m8123661533123661554151.00-20.11
CAediting_946308chr12_123661550_+ENSG00000111358.12ENST00000618160hsa-miR-4755-5p1236615461236615527mer-m8123661530123661553151.00-20.75
CAediting_946308chr12_123661550_+ENSG00000111358.12ENST00000618160hsa-miR-5006-3p1236615461236615527mer-m8123661531123661553151.00-19.39
CAediting_946308chr12_123661550_+ENSG00000111358.12ENST00000618160hsa-miR-6231236615451236615528mer-1a123661530123661552149.00-24.25
CAediting_946308chr12_123661550_+ENSG00000111358.12ENST00000618160hsa-miR-6780b-3p1236615451236615517mer-1a123661530123661551149.00-30.00
CAediting_946308chr12_123661550_+ENSG00000111358.12ENST00000618160hsa-miR-6841-3p1236615441236615496mer123661530123661550142.00-21.77
CAediting_946309chr12_123661552_+ENSG00000111358.12ENST00000618160hsa-miR-6881-3p1236615461236615527mer-m8123661530123661553162.00-24.00
CAediting_946310chr12_123661553_+ENSG00000111358.12ENST00000618160hsa-miR-891b1236615511236615566mer123661536123661557142.00-17.40
CAediting_946312chr12_123661562_+ENSG00000111358.12ENST00000618160hsa-miR-378a-3p1236615601236615667mer-m8123661547123661567146.00-14.44
CAediting_946312chr12_123661562_+ENSG00000111358.12ENST00000618160hsa-miR-378b1236615601236615667mer-m8123661551123661567150.00-18.32
CAediting_946312chr12_123661562_+ENSG00000111358.12ENST00000618160hsa-miR-378c1236615601236615667mer-m8123661544123661567146.00-15.94
CAediting_946312chr12_123661562_+ENSG00000111358.12ENST00000618160hsa-miR-378d1236615601236615667mer-m8123661549123661567146.00-14.44
CAediting_946312chr12_123661562_+ENSG00000111358.12ENST00000618160hsa-miR-378d1236615601236615667mer-m8123661549123661567146.00-14.44
CAediting_946312chr12_123661562_+ENSG00000111358.12ENST00000618160hsa-miR-378e1236615601236615667mer-m8123661550123661567146.00-16.73
CAediting_946312chr12_123661562_+ENSG00000111358.12ENST00000618160hsa-miR-378f1236615601236615667mer-m8123661549123661567150.00-14.47
CAediting_946312chr12_123661562_+ENSG00000111358.12ENST00000618160hsa-miR-378h1236615601236615667mer-m8123661547123661567143.00-13.12
CAediting_946312chr12_123661562_+ENSG00000111358.12ENST00000618160hsa-miR-378i1236615601236615667mer-m8123661545123661567145.00-15.75
CAediting_946312chr12_123661562_+ENSG00000111358.12ENST00000618160hsa-miR-422a1236615601236615667mer-m8123661546123661567152.00-18.43
CAediting_946317chr12_123661590_+ENSG00000111358.12ENST00000618160hsa-miR-4638-5p1236615851236615928mer-1a123661573123661592146.00-20.28
CAediting_946320chr12_123661625_+ENSG00000111358.12ENST00000618160hsa-miR-339-5p1236616191236616257mer-m8123661604123661626163.00-27.89
CAediting_946320chr12_123661625_+ENSG00000111358.12ENST00000618160hsa-miR-6726-3p1236616221236616287mer-m8123661608123661629169.00-33.86
CAediting_946330chr12_123661766_+ENSG00000111358.12ENST00000618160hsa-miR-5001-3p1236617631236617697mer-m8123661749123661770145.00-17.30
CAediting_946331chr12_123661770_+ENSG00000111358.12ENST00000618160hsa-miR-10a-5p1236617651236617717mer-m8123661750123661772142.00-15.41
CAediting_946331chr12_123661770_+ENSG00000111358.12ENST00000618160hsa-miR-10b-5p1236617651236617717mer-m8123661750123661772150.00-14.28
CAediting_946331chr12_123661770_+ENSG00000111358.12ENST00000618160hsa-miR-339-5p1236617641236617707mer-m8123661749123661771152.00-21.25
CAediting_946331chr12_123661770_+ENSG00000111358.12ENST00000618160hsa-miR-44211236617631236617697mer-m8123661748123661770155.00-14.77
CAediting_946331chr12_123661770_+ENSG00000111358.12ENST00000618160hsa-miR-4725-5p1236617661236617727mer-m8123661753123661773140.00-16.57
CAediting_946331chr12_123661770_+ENSG00000111358.12ENST00000618160hsa-miR-504-5p1236617661236617727mer-m8123661754123661773152.00-21.33
CAediting_946331chr12_123661770_+ENSG00000111358.12ENST00000618160hsa-miR-5699-3p1236617631236617697mer-m8123661749123661770143.00-16.39
CAediting_946334chr12_123661809_+ENSG00000111358.12ENST00000618160hsa-miR-5961236618051236618117mer-m8123661792123661812154.00-24.04
CAediting_946336chr12_123661825_+ENSG00000111358.12ENST00000618160hsa-miR-3158-5p1236618181236618247mer-m8123661805123661825155.00-26.04
CAediting_946336chr12_123661825_+ENSG00000111358.12ENST00000618160hsa-miR-3158-5p1236618181236618247mer-m8123661805123661825155.00-26.04
CAediting_946336chr12_123661825_+ENSG00000111358.12ENST00000618160hsa-miR-5961236618211236618277mer-m8123661808123661828144.00-20.40
CAediting_946338chr12_123661874_+ENSG00000111358.12ENST00000618160hsa-miR-3614-5p1236618671236618737mer-m8123661851123661874152.00-25.27
CAediting_946338chr12_123661874_+ENSG00000111358.12ENST00000618160hsa-miR-4691-3p1236618711236618777mer-m8123661851123661878150.00-26.36
CAediting_946348chr12_123662008_+ENSG00000111358.12ENST00000618160hsa-miR-513a-5p1236620021236620087mer-m8123661992123662009152.00-19.21
CAediting_946348chr12_123662008_+ENSG00000111358.12ENST00000618160hsa-miR-513a-5p1236620021236620087mer-m8123661992123662009152.00-19.21
CAediting_946348chr12_123662008_+ENSG00000111358.12ENST00000618160hsa-miR-6381236620071236620137mer-1a123661989123662013155.00-32.89
CAediting_946349chr12_123662009_+ENSG00000111358.12ENST00000618160hsa-miR-80521236620071236620137mer-1a123661993123662013141.00-21.77
CAediting_946351chr12_123662018_+ENSG00000111358.12ENST00000618160hsa-miR-1207-3p1236620111236620177mer-m8123662001123662018140.00-12.56
CAediting_946351chr12_123662018_+ENSG00000111358.12ENST00000618160hsa-miR-6461236620131236620197mer-m8123662002123662020145.00-14.99
CAediting_946354chr12_123662031_+ENSG00000111358.12ENST00000618160hsa-miR-18a-3p1236620301236620356mer123662016123662036146.00-24.20
CAediting_946354chr12_123662031_+ENSG00000111358.12ENST00000618160hsa-miR-19131236620291236620357mer-m8123662014123662036147.00-23.71
CAediting_946358chr12_123662050_+ENSG00000111358.12ENST00000618160hsa-miR-10400-3p1236620471236620537mer-m8123662033123662054141.00-22.13
CAediting_946358chr12_123662050_+ENSG00000111358.12ENST00000618160hsa-miR-44371236620461236620538mer-1a123662033123662053146.00-19.59
CAediting_946358chr12_123662050_+ENSG00000111358.12ENST00000618160hsa-miR-46741236620471236620537mer-m8123662034123662054147.00-23.48
CAediting_946362chr12_123662078_+ENSG00000111358.12ENST00000618160hsa-miR-4638-5p1236620731236620808mer-1a123662061123662080146.00-20.28
CAediting_946276chr12_123661036_+ENSG00000111358.12ENST00000618160hsa-miR-513a-5p1236610301236610367mer-m8123661019123661037151.00-16.57
CAediting_946276chr12_123661036_+ENSG00000111358.12ENST00000618160hsa-miR-513a-5p1236610301236610367mer-m8123661019123661037151.00-16.57
CAediting_946276chr12_123661036_+ENSG00000111358.12ENST00000618160hsa-miR-6381236610351236610417mer-1a123661016123661041145.00-27.65
CAediting_946277chr12_123661037_+ENSG00000111358.12ENST00000618160hsa-miR-80521236610351236610417mer-1a123661021123661041143.00-20.26
CAediting_946278chr12_123661059_+ENSG00000111358.12ENST00000618160hsa-miR-2355-5p1236610551236610617mer-m8123661042123661062140.00-16.43
CAediting_946278chr12_123661059_+ENSG00000111358.12ENST00000618160hsa-miR-6849-3p1236610521236610587mer-m8123661038123661059140.00-18.02
CAediting_946281chr12_123661077_+ENSG00000111358.12ENST00000618160hsa-miR-3136-3p1236610731236610797mer-m8123661059123661080155.00-15.56
CAediting_946281chr12_123661077_+ENSG00000111358.12ENST00000618160hsa-miR-6724-5p1236610751236610817mer-m8123661061123661082149.00-28.60
CAediting_946281chr12_123661077_+ENSG00000111358.12ENST00000618160hsa-miR-6724-5p1236610751236610817mer-m8123661061123661082149.00-28.60
CAediting_946281chr12_123661077_+ENSG00000111358.12ENST00000618160hsa-miR-6724-5p1236610751236610817mer-m8123661061123661082149.00-28.60
CAediting_946281chr12_123661077_+ENSG00000111358.12ENST00000618160hsa-miR-6724-5p1236610751236610817mer-m8123661061123661082149.00-28.60
CAediting_946281chr12_123661077_+ENSG00000111358.12ENST00000618160hsa-miR-6773-5p1236610751236610817mer-m8123661062123661082155.00-23.12
CAediting_946281chr12_123661077_+ENSG00000111358.12ENST00000618160hsa-miR-7155-3p1236610731236610797mer-m8123661059123661080150.00-22.68
CAediting_946283chr12_123661105_+ENSG00000111358.12ENST00000618160hsa-miR-4632-3p1236611001236611078mer-1a123661088123661107161.00-33.25
CAediting_946285chr12_123661110_+ENSG00000111358.12ENST00000618160hsa-miR-1915-5p1236611051236611106mer123661095123661116144.00-37.17
CAediting_946285chr12_123661110_+ENSG00000111358.12ENST00000618160hsa-miR-3200-3p1236611051236611117mer-m8123661093123661112156.00-29.59
CAediting_946286chr12_123661121_+ENSG00000111358.12ENST00000618160hsa-miR-483-5p1236611171236611237mer-m8123661103123661124140.00-14.01
CAediting_946287chr12_123661387_+ENSG00000111358.12ENST00000618160hsa-miR-6381236613851236613928mer-1a123661368123661392167.00-36.72
CAediting_946289chr12_123661393_+ENSG00000111358.12ENST00000618160hsa-miR-371a-3p1236613911236613977mer-m8123661376123661398145.00-16.22
CAediting_946290chr12_123661426_+ENSG00000111358.12ENST00000618160hsa-miR-10a-5p1236614221236614287mer-m8123661408123661429153.00-19.16
CAediting_946290chr12_123661426_+ENSG00000111358.12ENST00000618160hsa-miR-10b-5p1236614221236614287mer-m8123661408123661429145.00-14.37
CAediting_946290chr12_123661426_+ENSG00000111358.12ENST00000618160hsa-miR-146b-3p1236614211236614277mer-m8123661407123661428148.00-21.67
CAediting_946290chr12_123661426_+ENSG00000111358.12ENST00000618160hsa-miR-46791236614191236614257mer-m8123661405123661426144.00-16.55
CAediting_946290chr12_123661426_+ENSG00000111358.12ENST00000618160hsa-miR-46791236614191236614257mer-m8123661405123661426144.00-16.55
CAediting_946290chr12_123661426_+ENSG00000111358.12ENST00000618160hsa-miR-4725-5p1236614231236614308mer-1a123661410123661430149.00-19.10
CAediting_946290chr12_123661426_+ENSG00000111358.12ENST00000618160hsa-miR-504-5p1236614231236614308mer-1a123661408123661430154.00-24.18
CAediting_946292chr12_123661440_+ENSG00000111358.12ENST00000618160hsa-miR-121131236614331236614397mer-m8123661416123661440150.00-18.62
CAediting_946292chr12_123661440_+ENSG00000111358.12ENST00000618160hsa-miR-45391236614331236614397mer-m8123661421123661440153.00-17.97
CAediting_946294chr12_123661465_+ENSG00000111358.12ENST00000618160hsa-miR-3158-3p1236614621236614687mer-m8123661444123661469157.00-26.16
CAediting_946294chr12_123661465_+ENSG00000111358.12ENST00000618160hsa-miR-3158-3p1236614621236614687mer-m8123661444123661469157.00-26.16
CAediting_946294chr12_123661465_+ENSG00000111358.12ENST00000618160hsa-miR-412-3p1236614581236614647mer-m8123661447123661465147.00-18.01
CAediting_946294chr12_123661465_+ENSG00000111358.12ENST00000618160hsa-miR-6754-3p1236614581236614647mer-m8123661445123661465146.00-17.12
CAediting_946299chr12_123661494_+ENSG00000111358.12ENST00000618160hsa-miR-548s1236614911236614977mer-m8123661476123661498153.00-15.02
CAediting_946300chr12_123661498_+ENSG00000111358.12ENST00000618160hsa-miR-3177-3p1236614941236615007mer-m8123661481123661501140.00-16.25
CAediting_946301chr12_123661504_+ENSG00000111358.12ENST00000618160hsa-miR-6814-3p1236614971236615037mer-m8123661483123661504141.00-13.47
CAediting_946301chr12_123661504_+ENSG00000111358.12ENST00000618160hsa-miR-6872-5p1236614971236615037mer-m8123661485123661504140.00-15.51
CAediting_946302chr12_123661507_+ENSG00000111358.12ENST00000618160hsa-miR-4722-3p1236615051236615117mer-m8123661491123661512140.00-17.17
CAediting_946302chr12_123661507_+ENSG00000111358.12ENST00000618160hsa-miR-6727-3p1236615051236615117mer-m8123661493123661512152.00-20.66
CAediting_946305chr12_123661537_+ENSG00000111358.12ENST00000618160hsa-miR-39431236615341236615407mer-m8123661521123661541150.00-22.74
CAediting_946305chr12_123661537_+ENSG00000111358.12ENST00000618160hsa-miR-6840-5p1236615321236615376mer123661513123661538145.00-27.05
CAediting_946314chr12_123661569_+ENSG00000111358.12ENST00000618160hsa-miR-19131236615671236615748mer-1a123661553123661574150.00-22.39
CAediting_946314chr12_123661569_+ENSG00000111358.12ENST00000618160hsa-miR-331-3p1236615631236615697mer-m8123661550123661570142.00-17.53
CAediting_946314chr12_123661569_+ENSG00000111358.12ENST00000618160hsa-miR-43081236615621236615687mer-m8123661552123661569143.00-15.60
CAediting_946314chr12_123661569_+ENSG00000111358.12ENST00000618160hsa-miR-43131236615651236615728mer-1a123661553123661572158.00-21.75
CAediting_946315chr12_123661573_+ENSG00000111358.12ENST00000618160hsa-miR-12811236615661236615727mer-m8123661557123661573145.00-17.85
CAediting_946316chr12_123661575_+ENSG00000111358.12ENST00000618160hsa-miR-6747-3p1236615681236615747mer-m8123661555123661575146.00-19.62
CAediting_946316chr12_123661575_+ENSG00000111358.12ENST00000618160hsa-miR-6752-3p1236615691236615757mer-m8123661556123661576147.00-20.23
CAediting_946316chr12_123661575_+ENSG00000111358.12ENST00000618160hsa-miR-6801-3p1236615701236615767mer-m8123661561123661577153.00-27.56
CAediting_946316chr12_123661575_+ENSG00000111358.12ENST00000618160hsa-miR-6810-3p1236615701236615767mer-m8123661554123661577161.00-24.23
CAediting_946318chr12_123661591_+ENSG00000111358.12ENST00000618160hsa-miR-149-5p1236615841236615907mer-m8123661569123661591152.00-22.11
CAediting_946322chr12_123661661_+ENSG00000111358.12ENST00000618160hsa-miR-1292-3p1236616561236616627mer-m8123661644123661663145.00-18.80
CAediting_946322chr12_123661661_+ENSG00000111358.12ENST00000618160hsa-miR-523-3p1236616581236616647mer-m8123661643123661665142.00-18.60
CAediting_946323chr12_123661671_+ENSG00000111358.12ENST00000618160hsa-miR-46341236616681236616747mer-m8123661656123661675148.00-23.17
CAediting_946324chr12_123661679_+ENSG00000111358.12ENST00000618160hsa-miR-513a-5p1236616731236616797mer-m8123661663123661680144.00-15.81
CAediting_946324chr12_123661679_+ENSG00000111358.12ENST00000618160hsa-miR-513a-5p1236616731236616797mer-m8123661663123661680144.00-15.81
CAediting_946324chr12_123661679_+ENSG00000111358.12ENST00000618160hsa-miR-6381236616781236616847mer-1a123661660123661684163.00-33.49
CAediting_946325chr12_123661685_+ENSG00000111358.12ENST00000618160hsa-miR-371a-3p1236616831236616897mer-m8123661668123661690145.00-17.36
CAediting_946329chr12_123661764_+ENSG00000111358.12ENST00000618160hsa-miR-188-3p1236617591236617657mer-m8123661745123661766143.00-15.44
CAediting_946329chr12_123661764_+ENSG00000111358.12ENST00000618160hsa-miR-4433a-5p1236617601236617678mer-1a123661747123661767140.00-12.13
CAediting_946329chr12_123661764_+ENSG00000111358.12ENST00000618160hsa-miR-4433b-5p1236617611236617677mer-m8123661748123661768145.00-14.08
CAediting_946332chr12_123661788_+ENSG00000111358.12ENST00000618160hsa-miR-3940-3p1236617851236617917mer-m8123661771123661792147.00-22.47
CAediting_946333chr12_123661808_+ENSG00000111358.12ENST00000618160hsa-miR-6814-3p1236618041236618096mer123661787123661810146.00-26.55
CAediting_946341chr12_123661911_+ENSG00000111358.12ENST00000618160hsa-miR-216b-5p1236619071236619137mer-m8123661893123661914150.00-16.29
CAediting_946341chr12_123661911_+ENSG00000111358.12ENST00000618160hsa-miR-4762-5p1236619091236619168mer-1a123661894123661916144.00-10.70
CAediting_946342chr12_123661967_+ENSG00000111358.12ENST00000618160hsa-miR-222-5p1236619611236619688mer-1a123661945123661968146.00-14.38
CAediting_946342chr12_123661967_+ENSG00000111358.12ENST00000618160hsa-miR-30a-3p1236619631236619708mer-1a123661946123661970150.00-10.49
CAediting_946342chr12_123661967_+ENSG00000111358.12ENST00000618160hsa-miR-30d-3p1236619631236619708mer-1a123661945123661970147.00-10.55
CAediting_946342chr12_123661967_+ENSG00000111358.12ENST00000618160hsa-miR-30e-3p1236619631236619708mer-1a123661946123661970150.00-11.75
CAediting_946342chr12_123661967_+ENSG00000111358.12ENST00000618160hsa-miR-9361236619601236619678mer-1a123661945123661967159.00-26.12
CAediting_946343chr12_123661968_+ENSG00000111358.12ENST00000618160hsa-miR-3251236619611236619688mer-1a123661946123661968141.00-12.77
CAediting_946344chr12_123661969_+ENSG00000111358.12ENST00000618160hsa-miR-6301236619671236619748mer-1a123661953123661974157.00-16.15
CAediting_946353chr12_123662027_+ENSG00000111358.12ENST00000618160hsa-miR-6791-3p1236620211236620277mer-m8123662008123662028154.00-17.64
CAediting_946353chr12_123662027_+ENSG00000111358.12ENST00000618160hsa-miR-6829-3p1236620211236620277mer-m8123662009123662028155.00-20.58
CAediting_946356chr12_123662038_+ENSG00000111358.12ENST00000618160hsa-miR-6752-3p1236620311236620377mer-m8123662019123662038152.00-24.18
CAediting_946356chr12_123662038_+ENSG00000111358.12ENST00000618160hsa-miR-6801-3p1236620321236620398mer-1a123662018123662039149.00-25.53
CAediting_946356chr12_123662038_+ENSG00000111358.12ENST00000618160hsa-miR-6810-3p1236620321236620398mer-1a123662017123662039150.00-25.94
CAediting_946360chr12_123662057_+ENSG00000111358.12ENST00000618160hsa-miR-331-3p1236620511236620577mer-m8123662038123662058146.00-20.27
CAediting_946360chr12_123662057_+ENSG00000111358.12ENST00000618160hsa-miR-42921236620501236620567mer-m8123662040123662057140.00-21.97
CAediting_946360chr12_123662057_+ENSG00000111358.12ENST00000618160hsa-miR-4640-3p1236620531236620597mer-m8123662039123662060154.00-23.23
CAediting_946360chr12_123662057_+ENSG00000111358.12ENST00000618160hsa-miR-6791-5p1236620501236620567mer-m8123662036123662057153.00-29.34
CAediting_946361chr12_123662070_+ENSG00000111358.12ENST00000618160hsa-miR-6511b-3p1236620691236620746mer123662053123662075140.00-24.84
CAediting_946361chr12_123662070_+ENSG00000111358.12ENST00000618160hsa-miR-6511b-3p1236620691236620746mer123662053123662075140.00-24.84
CAediting_946361chr12_123662070_+ENSG00000111358.12ENST00000618160hsa-miR-6784-3p1236620691236620746mer123662053123662075143.00-26.47
CAediting_946364chr12_123662120_+ENSG00000111358.12ENST00000618160hsa-miR-2355-3p1236621171236621248mer-1a123662103123662124162.00-21.21
CAediting_946367chr12_123662125_+ENSG00000111358.12ENST00000618160hsa-miR-5007-5p1236621231236621297mer-m8123662109123662130148.00-14.55
CAediting_946367chr12_123662125_+ENSG00000111358.12ENST00000618160hsa-miR-9241236621221236621287mer-m8123662109123662129155.00-20.95
CAediting_946280chr12_123661066_+ENSG00000111358.12ENST00000618160hsa-miR-339-5p1236610601236610667mer-m8123661046123661067163.00-29.20
CAediting_946284chr12_123661109_+ENSG00000111358.12ENST00000618160hsa-miR-60711236611031236611097mer-m8123661090123661110152.00-24.03
CAediting_946284chr12_123661109_+ENSG00000111358.12ENST00000618160hsa-miR-6728-3p1236611041236611107mer-m8123661084123661111147.00-24.09
CAediting_946284chr12_123661109_+ENSG00000111358.12ENST00000618160hsa-miR-6794-3p1236611071236611137mer-m8123661094123661114149.00-19.10
CAediting_946293chr12_123661464_+ENSG00000111358.12ENST00000618160hsa-miR-11821236614621236614687mer-m8123661447123661469142.00-14.64
CAediting_946293chr12_123661464_+ENSG00000111358.12ENST00000618160hsa-miR-1229-3p1236614581236614647mer-m8123661441123661465154.00-17.44
CAediting_946293chr12_123661464_+ENSG00000111358.12ENST00000618160hsa-miR-6511a-3p1236614571236614648mer-1a123661443123661464147.00-17.99
CAediting_946293chr12_123661464_+ENSG00000111358.12ENST00000618160hsa-miR-6511a-3p1236614571236614648mer-1a123661443123661464147.00-17.99
CAediting_946293chr12_123661464_+ENSG00000111358.12ENST00000618160hsa-miR-6511a-3p1236614571236614648mer-1a123661443123661464147.00-17.99
CAediting_946293chr12_123661464_+ENSG00000111358.12ENST00000618160hsa-miR-6511a-3p1236614571236614648mer-1a123661443123661464147.00-17.99
CAediting_946293chr12_123661464_+ENSG00000111358.12ENST00000618160hsa-miR-6511b-3p1236614571236614648mer-1a123661441123661464144.00-16.86
CAediting_946293chr12_123661464_+ENSG00000111358.12ENST00000618160hsa-miR-6511b-3p1236614571236614648mer-1a123661441123661464144.00-16.86
CAediting_946295chr12_123661479_+ENSG00000111358.12ENST00000618160hsa-miR-222-5p1236614731236614808mer-1a123661457123661480146.00-14.38
CAediting_946295chr12_123661479_+ENSG00000111358.12ENST00000618160hsa-miR-30a-3p1236614751236614828mer-1a123661458123661482150.00-10.49
CAediting_946295chr12_123661479_+ENSG00000111358.12ENST00000618160hsa-miR-30d-3p1236614751236614828mer-1a123661457123661482147.00-10.55
CAediting_946295chr12_123661479_+ENSG00000111358.12ENST00000618160hsa-miR-30e-3p1236614751236614828mer-1a123661458123661482150.00-11.75
CAediting_946295chr12_123661479_+ENSG00000111358.12ENST00000618160hsa-miR-9361236614721236614798mer-1a123661457123661479159.00-26.12
CAediting_946327chr12_123661702_+ENSG00000111358.12ENST00000618160hsa-miR-31761236616951236617017mer-m8123661684123661702140.00-15.24
CAediting_946327chr12_123661702_+ENSG00000111358.12ENST00000618160hsa-miR-3620-3p1236616991236617057mer-m8123661684123661706156.00-24.24
CAediting_946327chr12_123661702_+ENSG00000111358.12ENST00000618160hsa-miR-3922-3p1236616951236617017mer-m8123661681123661702141.00-19.73
CAediting_946339chr12_123661884_+ENSG00000111358.12ENST00000618160hsa-miR-4766-3p1236618801236618867mer-m8123661864123661887154.00-14.95
CAediting_946346chr12_123661973_+ENSG00000111358.12ENST00000618160hsa-miR-3680-3p1236619701236619778mer-1a123661955123661977140.00-13.99
CAediting_946346chr12_123661973_+ENSG00000111358.12ENST00000618160hsa-miR-3680-3p1236619701236619778mer-1a123661955123661977140.00-13.99

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_946324chr12_123661679_+ENSG00000111358.12ENST00000618160hsa-miR-10399-5p1236616741236616807mer-m8123661660123661681145-11.47
CAediting_946348chr12_123662008_+ENSG00000111358.12ENST00000618160hsa-miR-10399-5p1236620031236620097mer-m8123661987123662010142-14.35
CAediting_946349chr12_123662009_+ENSG00000111358.12ENST00000618160hsa-miR-10399-5p1236620031236620097mer-m8123661987123662010142-14.35
CAediting_946276chr12_123661036_+ENSG00000111358.12ENST00000618160hsa-miR-10399-5p1236610311236610377mer-m8123661016123661038149-10.59
CAediting_946277chr12_123661037_+ENSG00000111358.12ENST00000618160hsa-miR-10399-5p1236610311236610377mer-m8123661016123661038149-10.59
CAediting_946281chr12_123661077_+ENSG00000111358.12ENST00000618160hsa-miR-10400-3p1236610751236610817mer-m8123661061123661082141-21.63
CAediting_946282chr12_123661082_+ENSG00000111358.12ENST00000618160hsa-miR-10400-3p1236610751236610817mer-m8123661061123661082141-21.63
CAediting_946363chr12_123662095_+ENSG00000111358.12ENST00000618160hsa-miR-106a-3p1236620931236620997mer-m8123662081123662100148-13.48
CAediting_946352chr12_123662022_+ENSG00000111358.12ENST00000618160hsa-miR-12001236620181236620247mer-m8123662004123662025141-17.86
CAediting_946360chr12_123662057_+ENSG00000111358.12ENST00000618160hsa-miR-1306-5p1236620541236620607mer-m8123662038123662061141-19.34
CAediting_946359chr12_123662054_+ENSG00000111358.12ENST00000618160hsa-miR-1343-3p1236620501236620567mer-m8123662034123662057150-25.44
CAediting_946360chr12_123662057_+ENSG00000111358.12ENST00000618160hsa-miR-1343-3p1236620501236620567mer-m8123662034123662057150-25.44
CAediting_946282chr12_123661082_+ENSG00000111358.12ENST00000618160hsa-miR-1343-3p1236610781236610847mer-m8123661063123661085150-26.18
CAediting_946301chr12_123661504_+ENSG00000111358.12ENST00000618160hsa-miR-138-1-3p1236615011236615077mer-m8123661487123661508147-16.29
CAediting_946302chr12_123661507_+ENSG00000111358.12ENST00000618160hsa-miR-138-1-3p1236615011236615077mer-m8123661487123661508147-16.29
CAediting_946306chr12_123661543_+ENSG00000111358.12ENST00000618160hsa-miR-3152-5p1236615411236615477mer-m8123661526123661548145-14.62
CAediting_946307chr12_123661548_+ENSG00000111358.12ENST00000618160hsa-miR-3152-5p1236615411236615477mer-m8123661526123661548145-14.62
CAediting_946323chr12_123661671_+ENSG00000111358.12ENST00000618160hsa-miR-3186-5p1236616701236616756mer123661655123661676140-29.1
CAediting_946332chr12_123661788_+ENSG00000111358.12ENST00000618160hsa-miR-3187-5p1236617821236617887mer-m8123661764123661789153-30.15
CAediting_946341chr12_123661911_+ENSG00000111358.12ENST00000618160hsa-miR-3606-3p1236619081236619147mer-m8123661895123661915150-7.68
CAediting_946335chr12_123661824_+ENSG00000111358.12ENST00000618160hsa-miR-3678-3p1236618171236618248mer-1a123661803123661824140-16.21
CAediting_946312chr12_123661562_+ENSG00000111358.12ENST00000618160hsa-miR-378j1236615601236615667mer-m8123661550123661567150-12.04
CAediting_946313chr12_123661566_+ENSG00000111358.12ENST00000618160hsa-miR-378j1236615601236615667mer-m8123661550123661567150-12.04
CAediting_946353chr12_123662027_+ENSG00000111358.12ENST00000618160hsa-miR-42641236620251236620317mer-m8123662016123662032140-12.53
CAediting_946354chr12_123662031_+ENSG00000111358.12ENST00000618160hsa-miR-42641236620251236620317mer-m8123662016123662032140-12.53
CAediting_946281chr12_123661077_+ENSG00000111358.12ENST00000618160hsa-miR-44371236610741236610818mer-1a123661061123661081146-19.59
CAediting_946337chr12_123661862_+ENSG00000111358.12ENST00000618160hsa-miR-44781236618591236618657mer-m8123661851123661866149-25.05
CAediting_946331chr12_123661770_+ENSG00000111358.12ENST00000618160hsa-miR-45221236617661236617727mer-m8123661752123661773150-16.25
CAediting_946337chr12_123661862_+ENSG00000111358.12ENST00000618160hsa-miR-4649-3p1236618561236618627mer-m8123661843123661863140-14.11
CAediting_946281chr12_123661077_+ENSG00000111358.12ENST00000618160hsa-miR-46741236610751236610817mer-m8123661062123661082147-23.63
CAediting_946282chr12_123661082_+ENSG00000111358.12ENST00000618160hsa-miR-46741236610751236610817mer-m8123661062123661082147-23.63
CAediting_946299chr12_123661494_+ENSG00000111358.12ENST00000618160hsa-miR-4735-5p1236614881236614947mer-m8123661474123661495140-5.48
CAediting_946347chr12_123661982_+ENSG00000111358.12ENST00000618160hsa-miR-4735-5p1236619761236619827mer-m8123661962123661983140-5.48
CAediting_946307chr12_123661548_+ENSG00000111358.12ENST00000618160hsa-miR-4753-3p1236615461236615527mer-1a123661531123661552146-27.76
CAediting_946308chr12_123661550_+ENSG00000111358.12ENST00000618160hsa-miR-4753-3p1236615461236615527mer-1a123661531123661552146-27.76
CAediting_946309chr12_123661552_+ENSG00000111358.12ENST00000618160hsa-miR-4753-3p1236615461236615527mer-1a123661531123661552146-27.76
CAediting_946361chr12_123662070_+ENSG00000111358.12ENST00000618160hsa-miR-4772-3p1236620641236620707mer-m8123662049123662071154-18.37
CAediting_946311chr12_123661561_+ENSG00000111358.12ENST00000618160hsa-miR-498-5p1236615551236615617mer-m8123661540123661562142-10.33
CAediting_946312chr12_123661562_+ENSG00000111358.12ENST00000618160hsa-miR-498-5p1236615551236615617mer-m8123661540123661562142-10.33
CAediting_946357chr12_123662049_+ENSG00000111358.12ENST00000618160hsa-miR-498-5p1236620431236620497mer-m8123662028123662050142-10.65
CAediting_946358chr12_123662050_+ENSG00000111358.12ENST00000618160hsa-miR-498-5p1236620431236620497mer-m8123662028123662050142-10.65
CAediting_946315chr12_123661573_+ENSG00000111358.12ENST00000618160hsa-miR-5001-3p1236615681236615747mer-m8123661551123661575152-20.7
CAediting_946316chr12_123661575_+ENSG00000111358.12ENST00000618160hsa-miR-5001-3p1236615681236615747mer-m8123661551123661575152-20.7
CAediting_946340chr12_123661908_+ENSG00000111358.12ENST00000618160hsa-miR-5001-3p1236619031236619108mer-1a123661886123661910150-20.37
CAediting_946302chr12_123661507_+ENSG00000111358.12ENST00000618160hsa-miR-5089-3p1236615031236615097mer-m8123661487123661510143-12.48
CAediting_946288chr12_123661388_+ENSG00000111358.12ENST00000618160hsa-miR-5089-5p1236613861236613927mer-m8123661371123661393148-14.09
CAediting_946289chr12_123661393_+ENSG00000111358.12ENST00000618160hsa-miR-5089-5p1236613861236613927mer-m8123661371123661393148-14.09
CAediting_946325chr12_123661685_+ENSG00000111358.12ENST00000618160hsa-miR-5089-5p1236616781236616847mer-m8123661663123661685148-14.13
CAediting_946349chr12_123662009_+ENSG00000111358.12ENST00000618160hsa-miR-5089-5p1236620071236620137mer-m8123661995123662014148-15.02
CAediting_946350chr12_123662014_+ENSG00000111358.12ENST00000618160hsa-miR-5089-5p1236620071236620137mer-m8123661995123662014148-15.02
CAediting_946277chr12_123661037_+ENSG00000111358.12ENST00000618160hsa-miR-5089-5p1236610351236610417mer-m8123661024123661042151-14.42
CAediting_946325chr12_123661685_+ENSG00000111358.12ENST00000618160hsa-miR-512-3p1236616831236616897mer-m8123661669123661690149-15.51
CAediting_946325chr12_123661685_+ENSG00000111358.12ENST00000618160hsa-miR-512-3p1236616831236616897mer-m8123661669123661690149-15.51
CAediting_946341chr12_123661911_+ENSG00000111358.12ENST00000618160hsa-miR-513a-3p1236619081236619147mer-m8123661893123661915155-12.05
CAediting_946341chr12_123661911_+ENSG00000111358.12ENST00000618160hsa-miR-513a-3p1236619081236619147mer-m8123661893123661915155-12.05
CAediting_946341chr12_123661911_+ENSG00000111358.12ENST00000618160hsa-miR-513c-3p1236619081236619147mer-m8123661893123661915155-10.7
CAediting_946332chr12_123661788_+ENSG00000111358.12ENST00000618160hsa-miR-5189-5p1236617821236617887mer-m8123661763123661789154-28.77
CAediting_946363chr12_123662095_+ENSG00000111358.12ENST00000618160hsa-miR-5197-5p1236620911236620966mer123662075123662097141-21.72
CAediting_946308chr12_123661550_+ENSG00000111358.12ENST00000618160hsa-miR-5571-5p1236615481236615547mer-m8123661533123661555142-25.75
CAediting_946309chr12_123661552_+ENSG00000111358.12ENST00000618160hsa-miR-5571-5p1236615481236615547mer-m8123661533123661555142-25.75
CAediting_946310chr12_123661553_+ENSG00000111358.12ENST00000618160hsa-miR-5571-5p1236615481236615547mer-m8123661533123661555142-25.75
CAediting_946356chr12_123662038_+ENSG00000111358.12ENST00000618160hsa-miR-5571-5p1236620361236620427mer-m8123662023123662043140-18.14
CAediting_946338chr12_123661874_+ENSG00000111358.12ENST00000618160hsa-miR-56901236618711236618777mer-m8123661858123661878145-16.74
CAediting_946332chr12_123661788_+ENSG00000111358.12ENST00000618160hsa-miR-6121236617821236617887mer-m8123661765123661789147-23.76
CAediting_946303chr12_123661526_+ENSG00000111358.12ENST00000618160hsa-miR-61281236615211236615266mer123661509123661527144-17.1
CAediting_946353chr12_123662027_+ENSG00000111358.12ENST00000618160hsa-miR-6221236620241236620307mer-1a123662008123662030141-26.18
CAediting_946324chr12_123661679_+ENSG00000111358.12ENST00000618160hsa-miR-6504-3p1236616741236616807mer-m8123661660123661681146-12.19
CAediting_946276chr12_123661036_+ENSG00000111358.12ENST00000618160hsa-miR-6504-3p1236610311236610377mer-m8123661019123661038140-10.27
CAediting_946277chr12_123661037_+ENSG00000111358.12ENST00000618160hsa-miR-6504-3p1236610311236610377mer-m8123661019123661038140-10.27
CAediting_946289chr12_123661393_+ENSG00000111358.12ENST00000618160hsa-miR-6506-5p1236613871236613937mer-m8123661372123661394144-13.08
CAediting_946325chr12_123661685_+ENSG00000111358.12ENST00000618160hsa-miR-6506-5p1236616791236616857mer-m8123661664123661686144-13.78
CAediting_946350chr12_123662014_+ENSG00000111358.12ENST00000618160hsa-miR-6506-5p1236620081236620147mer-m8123661994123662015147-16.19
CAediting_946363chr12_123662095_+ENSG00000111358.12ENST00000618160hsa-miR-652-3p1236620891236620957mer-m8123662075123662096149-16.73
CAediting_946313chr12_123661566_+ENSG00000111358.12ENST00000618160hsa-miR-660-3p1236615641236615707mer-m8123661551123661571154-16.09
CAediting_946314chr12_123661569_+ENSG00000111358.12ENST00000618160hsa-miR-660-3p1236615641236615707mer-m8123661551123661571154-16.09
CAediting_946332chr12_123661788_+ENSG00000111358.12ENST00000618160hsa-miR-6611236617841236617907mer-m8123661768123661791146-21.6
CAediting_946340chr12_123661908_+ENSG00000111358.12ENST00000618160hsa-miR-6738-3p1236619041236619118mer-1a123661889123661911151-15.71
CAediting_946341chr12_123661911_+ENSG00000111358.12ENST00000618160hsa-miR-6738-3p1236619041236619118mer-1a123661889123661911151-15.71
CAediting_946364chr12_123662120_+ENSG00000111358.12ENST00000618160hsa-miR-6739-3p1236621171236621248mer-1a123662103123662124150-18.51
CAediting_946365chr12_123662121_+ENSG00000111358.12ENST00000618160hsa-miR-6739-3p1236621171236621248mer-1a123662103123662124150-18.51
CAediting_946366chr12_123662123_+ENSG00000111358.12ENST00000618160hsa-miR-6739-3p1236621171236621248mer-1a123662103123662124150-18.51
CAediting_946359chr12_123662054_+ENSG00000111358.12ENST00000618160hsa-miR-6742-3p1236620491236620568mer-1a123662037123662056145-14.93
CAediting_946355chr12_123662035_+ENSG00000111358.12ENST00000618160hsa-miR-6747-3p1236620301236620378mer-1a123662017123662037152-21.39
CAediting_946337chr12_123661862_+ENSG00000111358.12ENST00000618160hsa-miR-6765-5p1236618561236618616mer123661841123661862151-30.57
CAediting_946305chr12_123661537_+ENSG00000111358.12ENST00000618160hsa-miR-6778-3p1236615331236615397mer-m8123661521123661540141-15.45
CAediting_946359chr12_123662054_+ENSG00000111358.12ENST00000618160hsa-miR-6783-3p1236620501236620567mer-m8123662037123662057146-18.44
CAediting_946360chr12_123662057_+ENSG00000111358.12ENST00000618160hsa-miR-6783-3p1236620501236620567mer-m8123662037123662057146-18.44
CAediting_946323chr12_123661671_+ENSG00000111358.12ENST00000618160hsa-miR-6807-5p1236616641236616707mer-m8123661650123661671147-23.88
CAediting_946294chr12_123661465_+ENSG00000111358.12ENST00000618160hsa-miR-6823-5p1236614631236614697mer-m8123661450123661470140-16.01
CAediting_946314chr12_123661569_+ENSG00000111358.12ENST00000618160hsa-miR-6829-3p1236615651236615728mer-1a123661553123661572140-18.75
CAediting_946314chr12_123661569_+ENSG00000111358.12ENST00000618160hsa-miR-6836-3p1236615661236615727mer-m8123661553123661573140-16.58
CAediting_946315chr12_123661573_+ENSG00000111358.12ENST00000618160hsa-miR-6836-3p1236615661236615727mer-m8123661553123661573140-16.58
CAediting_946312chr12_123661562_+ENSG00000111358.12ENST00000618160hsa-miR-6839-5p1236615601236615667mer-m8123661546123661567155-16.47
CAediting_946313chr12_123661566_+ENSG00000111358.12ENST00000618160hsa-miR-6839-5p1236615601236615667mer-m8123661546123661567155-16.47
CAediting_946332chr12_123661788_+ENSG00000111358.12ENST00000618160hsa-miR-68601236617821236617887mer-m8123661769123661789146-22.1
CAediting_946351chr12_123662018_+ENSG00000111358.12ENST00000618160hsa-miR-6869-5p1236620151236620217mer-m8123662000123662022146-19.73
CAediting_946352chr12_123662022_+ENSG00000111358.12ENST00000618160hsa-miR-6869-5p1236620151236620217mer-m8123662000123662022146-19.73
CAediting_946326chr12_123661701_+ENSG00000111358.12ENST00000618160hsa-miR-6878-3p1236616941236617018mer-1a123661681123661701142-14.14
CAediting_946279chr12_123661064_+ENSG00000111358.12ENST00000618160hsa-miR-6881-3p1236610631236610686mer123661046123661069143-25.29
CAediting_946280chr12_123661066_+ENSG00000111358.12ENST00000618160hsa-miR-6881-3p1236610631236610686mer123661046123661069143-25.29
CAediting_946283chr12_123661105_+ENSG00000111358.12ENST00000618160hsa-miR-6882-3p1236611011236611077mer-1a123661081123661107140-25.23
CAediting_946330chr12_123661766_+ENSG00000111358.12ENST00000618160hsa-miR-6888-3p1236617631236617697mer-m8123661750123661770146-14.6
CAediting_946331chr12_123661770_+ENSG00000111358.12ENST00000618160hsa-miR-6888-3p1236617631236617697mer-m8123661750123661770146-14.6
CAediting_946286chr12_123661121_+ENSG00000111358.12ENST00000618160hsa-miR-6890-5p1236611151236611217mer-m8123661102123661122140-12.58
CAediting_946302chr12_123661507_+ENSG00000111358.12ENST00000618160hsa-miR-6893-3p1236615061236615116mer123661492123661512146-16.8
CAediting_946324chr12_123661679_+ENSG00000111358.12ENST00000618160hsa-miR-7151-3p1236616721236616798mer-1a123661655123661679149-20.26
CAediting_946348chr12_123662008_+ENSG00000111358.12ENST00000618160hsa-miR-7151-3p1236620011236620088mer-1a123661988123662008140-12.04
CAediting_946337chr12_123661862_+ENSG00000111358.12ENST00000618160hsa-miR-7160-5p1236618571236618637mer-m8123661845123661864149-18.69
CAediting_946321chr12_123661629_+ENSG00000111358.12ENST00000618160hsa-miR-9241236616281236616336mer123661615123661634144-21.74
CAediting_946332chr12_123661788_+ENSG00000111358.12ENST00000618160hsa-miR-939-3p1236617831236617897mer-m8123661770123661790141-15.63
CAediting_946282chr12_123661082_+ENSG00000111358.12ENST00000618160hsa-miR-939-3p1236610771236610848mer-1a123661062123661084146-20.13

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_980496chr14_31014685_-ENSG00000111358.12ENST00000618160hsa-miR-624-3p1236614641236614707mer-m8123661452123661471153-13.5
CAediting_980496chr14_31014685_-ENSG00000111358.12ENST00000618160hsa-miR-624-3p1236619521236619587mer-m8123661939123661959152-13.11
CAediting_1229413chr17_67471544_+ENSG00000111358.12ENST00000618160hsa-miR-548aa1236604561236604627mer-m8123660434123660463148-9.6
CAediting_1229415chr17_67471547_+ENSG00000111358.12ENST00000618160hsa-miR-548aa1236604751236604817mer-m8123660460123660482159-14.51
CAediting_228905chr2_188297554_+ENSG00000111358.12ENST00000618160hsa-miR-561-3p1236621231236621297mer-m8123662111123662130146-14.54
CAediting_573001chr7_92204086_-ENSG00000111358.12ENST00000618160hsa-miR-1285-5p1236617601236617678mer-1a123661747123661767140-12.54
CAediting_1229413chr17_67471544_+ENSG00000111358.12ENST00000228955hsa-miR-548aa1236604561236604627mer-m8123660434123660463148-9.6
CAediting_1229415chr17_67471547_+ENSG00000111358.12ENST00000228955hsa-miR-548aa1236604751236604817mer-m8123660460123660482159-14.51

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_228905chr2_188297554_+ENSG00000111358.12ENST00000618160hsa-miR-561-3p1236621851236621917mer-m8123662171123662192140-8.74

check button Differentially expressed gene-miRNA network
boxplot

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The effects of the RNA editing to the stability of the RNA structures for GTF2H3

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.

check button RNA A-to-I editing in RNA structures for Minimum free energy (MFE).
CAeditom_IDENSTEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI

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Relation with ADAR for GTF2H3

check button Correlation between ADAR gene expression and RNA editing frequency
CancerCAeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)
BLCACAediting_946304chr12_123661530_+6.14190879772387e-080.386206304213303....
LGGCAediting_946304chr12_123661530_+1.30725514167011e-050.368081254101886....
BRCACAediting_946304chr12_123661530_+5.10654509187189e-350.443630297131964....
LIHCCAediting_946304chr12_123661530_+0.01875128978283270.146254393810167....
CESCCAediting_946304chr12_123661530_+3.5856056841972e-050.295815044631101....
LUADCAediting_946304chr12_123661530_+4.57743813559068e-100.338864657874132....
COADCAediting_946304chr12_123661530_+0.0008815921105082520.280971947308611....
LUSCCAediting_946304chr12_123661530_+3.24108466751993e-050.269809091395558....
GBMCAediting_946304chr12_123661530_+0.002104163313650170.377499708817919....
HNSCCAediting_946304chr12_123661530_+2.4036904649388e-090.3301980003607010.001767994194676240.176612523347907..
STADCAediting_946304chr12_123661530_+0.0002285375300747660.266387551678396....
THCACAediting_946304chr12_123661530_+0.001576907929236010.254196172782998....
UCECCAediting_946304chr12_123661530_+0.000636747170799880.257155800594418....
ESCACAediting_946304chr12_123661530_+0.001459767514996250.315649583257314....
OVCAediting_946304chr12_123661530_+0.0001387617508961060.239634242871974....
PAADCAediting_946304chr12_123661530_+0.0007553439538143430.373549449308956....
SKCMCAediting_946304chr12_123661530_+2.97388687114971e-050.33388200795208....
SARCCAediting_946304chr12_123661530_+0.005353551151980190.291238528345679....
BLCACAediting_946307chr12_123661548_+1.06205392873032e-050.320033986098687....
LGGCAediting_946307chr12_123661548_+3.9262500357644e-050.319993980334227....
BRCACAediting_946307chr12_123661548_+2.6208614935637e-320.417656648673711....
LIHCCAediting_946307chr12_123661548_+0.00113806772190140.253431153564153..0.003630547042519990.227282442562515
CESCCAediting_946307chr12_123661548_+0.004500852961742360.215004660065357....
LUADCAediting_946307chr12_123661548_+0.0002442411017398730.228688139813219....
LUSCCAediting_946307chr12_123661548_+1.51793859467461e-050.266768951218997....
GBMCAediting_946307chr12_123661548_+1.16037985740849e-070.395068291983706....
PRADCAediting_946307chr12_123661548_+0.001775721416115620.298720895996966....
HNSCCAediting_946307chr12_123661548_+6.12936299578805e-060.2577231087957070.02087320627390660.133343992180507..
STADCAediting_946307chr12_123661548_+8.50466956837753e-070.264772379602003....
ESCACAediting_946307chr12_123661548_+2.559812881822e-060.360913686546858....
OVCAediting_946307chr12_123661548_+8.8520636237674e-080.272959178850412....
SKCMCAediting_946307chr12_123661548_+0.0001036474240617730.332640024164378....
SARCCAediting_946307chr12_123661548_+0.005625623648718550.284990043105494....
TGCTCAediting_946307chr12_123661548_+0.01568530452273080.300914220014103....
BRCACAediting_946310chr12_123661553_+0.000709347494671310.203340591580074....
LUADCAediting_946310chr12_123661553_+0.03480044325087240.225318191511196....
OVCAediting_946310chr12_123661553_+0.002384985365153730.253864544356071....
BRCACAediting_946317chr12_123661590_+3.85467943428329e-090.323676326127139....
LIHCCAediting_946317chr12_123661590_+0.0003101452925989420.259558212349866....
CESCCAediting_946317chr12_123661590_+0.003636552167759180.333978766548445....
LUADCAediting_946317chr12_123661590_+0.0001603165917896260.300531384367991....
HNSCCAediting_946317chr12_123661590_+5.9845875807839e-050.357906762977611....
STADCAediting_946317chr12_123661590_+0.03077298479495480.238736082094006....
UCECCAediting_946317chr12_123661590_+..0.03214394512238870.2082906875252280.0003565422459910910.340400277255782
BRCACAediting_946336chr12_123661825_+..0.02400270127821960.181256320671407..
KIRCCAediting_946336chr12_123661825_+..0.001086621647237730.220827416467776..
SKCMCAediting_946336chr12_123661825_+..0.00335229850555350.314709022765636..
SARCCAediting_946336chr12_123661825_+..9.78178723225376e-090.672959236705512..
BRCACAediting_946337chr12_123661862_+0.02437883360075690.306104936860872....
STADCAediting_946352chr12_123662022_+0.004412322762054960.218625113749904....
ESCACAediting_946352chr12_123662022_+0.0129196221003270.270224847989485....
OVCAediting_946352chr12_123662022_+1.37772416290919e-070.341723444427504....
BLCACAediting_946358chr12_123662050_+0.01049734356881780.216427125073651....
LGGCAediting_946358chr12_123662050_+0.0001390555109438290.458470200855204....
BRCACAediting_946358chr12_123662050_+2.87969342503424e-200.392136696873761....
LIHCCAediting_946358chr12_123662050_+0.0008113017640381770.238499836514693....
CESCCAediting_946358chr12_123662050_+0.001021364948232050.263854927738971....
LUADCAediting_946358chr12_123662050_+1.11666945063383e-100.3911858534512....
LUSCCAediting_946358chr12_123662050_+0.0003502972373992270.252180313598043....
GBMCAediting_946358chr12_123662050_+4.10822357071078e-050.394364701883319....
HNSCCAediting_946358chr12_123662050_+6.49665345135895e-110.382638946373684....
STADCAediting_946358chr12_123662050_+9.8036443980018e-050.243383026926297....
ESCACAediting_946358chr12_123662050_+0.0005196107942669720.289591108792507....
OVCAediting_946358chr12_123662050_+1.66074178978445e-060.27030972774851....
SKCMCAediting_946358chr12_123662050_+0.006665704998786380.25058635396304....
SARCCAediting_946358chr12_123662050_+0.01121511325902410.31267964414799....
TGCTCAediting_946358chr12_123662050_+0.009116286243213070.326033265616257....

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Relation with cancer stages for GTF2H3

check button Correlation between Cancer stages and RNA editing frequency
CancerStage_typeCAeditomIDpositionP-valCoeff.
BRCApathologic_stageCAediting_946304chr12_123661530_+0.0009379395614262090.125953854048113
HNSCpathologic_stageCAediting_946307chr12_123661548_+0.001150635335329420.197176165543831
READpathologic_stageCAediting_946307chr12_123661548_+0.017705920302218-0.264585318374892
TGCTclinical_stageCAediting_946358chr12_123662050_+0.011201722410153-0.412384649065516
TGCTpathologic_stageCAediting_946358chr12_123662050_+0.00373241416773666-0.483950109804144
UCECclinical_stageCAediting_946317chr12_123661590_+0.02751123543298890.214138622038359

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Relation with survival for GTF2H3

check button Correlation between RNA editing and survival
CancerCAeditomIDpositionKMpvalueCoxpvalueCoxHR
LUADCAediting_946304chr12_123661530_+0.006913941425045420.01806689.85279
COADCAediting_946307chr12_123661548_+0.006107372187896480.03607653.15069
HNSCCAediting_946310chr12_123661553_+0.04463228412913790.00149934330.355
PAADCAediting_946307chr12_123661548_+0.03846584668035740.015145295.267

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RelatedDrugs for GTF2H3

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for GTF2H3

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease name# pubmedsSource