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Editing gene: GTF2F2 (CAeditome ID:2963)

Gene summary for GTF2F2

Gene summary

Gene information	Gene symbol	GTF2F2
	Gene ID	2963
	Gene name	general transcription factor IIF subunit 2
	Synonyms	BTF4\|RAP30\|TF2F2\|TFIIF
	Cytomap	13q14.12-q14.13
	Type of gene	protein-coding
	Description	general transcription factor IIF subunit 2ATP-dependent helicase GTF2F2TFIIF-betageneral transcription factor IIF 30 kDa subunitgeneral transcription factor IIF, polypeptide 2, 30kDatranscription initiation factor IIF subunit betatranscription initi
	Modification date	20210518
	UniProtAcc	P13984
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene	GO ID	GO term	PubMed ID
GTF2F2	GO:0005634	General transcription factor IIF subunit 2	9841876
GTF2F2	GO:0005654	General transcription factor IIF subunit 2	0000052
GTF2F2	GO:0015630	General transcription factor IIF subunit 2	0000052
GTF2F2	GO:0097550	General transcription factor IIF subunit 2	9841876

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RNA A-to-I events for GTF2F2

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000188342.10

RNA A-to-I editing events in Cancer.

CAediting_961398(45124634, +), CAediting_961399(45131715, +), CAediting_961400(45131785, +), CAediting_961401(45144210, +), CAediting_961402(45149234, +), CAediting_961403(45149322, +), CAediting_961404(45149346, +), CAediting_961405(45149358, +), CAediting_961406(45149377, +), CAediting_961407(45153768, +), CAediting_961408(45153777, +), CAediting_961409(45153783, +), CAediting_961410(45153786, +), CAediting_961411(45153792, +), CAediting_961412(45153825, +), CAediting_961413(45153856, +), CAediting_961414(45153857, +), CAediting_961415(45153862, +), CAediting_961416(45153870, +), CAediting_961417(45153874, +), CAediting_961418(45153880, +), CAediting_961419(45153883, +), CAediting_961420(45153897, +), CAediting_961421(45153898, +), CAediting_961422(45153902, +), CAediting_961423(45153915, +), CAediting_961424(45153918, +), CAediting_961425(45153927, +), CAediting_961426(45157783, +), CAediting_961427(45159750, +), CAediting_961428(45164003, +), CAediting_961429(45164007, +), CAediting_961430(45164012, +), CAediting_961431(45164103, +), CAediting_961432(45164457, +), CAediting_961433(45164573, +), CAediting_961434(45165364, +), CAediting_961435(45180907, +), CAediting_961436(45180928, +), CAediting_961437(45180929, +), CAediting_961438(45180930, +), CAediting_961439(45180933, +), CAediting_961440(45180979, +), CAediting_961441(45181019, +), CAediting_961442(45181056, +), CAediting_961443(45181077, +), CAediting_961444(45181116, +), CAediting_961445(45182204, +), CAediting_961446(45182214, +), CAediting_961447(45182230, +), CAediting_961448(45182250, +), CAediting_961449(45182251, +), CAediting_961450(45183904, +), CAediting_961451(45184039, +), CAediting_961452(45184048, +), CAediting_961453(45187128, +), CAediting_961454(45195839, +), CAediting_961455(45197361, +), CAediting_961456(45197388, +), CAediting_961457(45197398, +), CAediting_961458(45197420, +), CAediting_961459(45197429, +), CAediting_961460(45203210, +), CAediting_961461(45208053, +), CAediting_961462(45208057, +), CAediting_961463(45216635, +), CAediting_961464(45216660, +), CAediting_961465(45216771, +), CAediting_961466(45217072, +), CAediting_961467(45217089, +), CAediting_961468(45217137, +), CAediting_961469(45217139, +), CAediting_961470(45217143, +), CAediting_961471(45217179, +), CAediting_961472(45217237, +), CAediting_961473(45217261, +), CAediting_961474(45222989, +), CAediting_961475(45222992, +), CAediting_961476(45225551, +), CAediting_961477(45233656, +), CAediting_961478(45234782, +), CAediting_961479(45234790, +), CAediting_961480(45234791, +), CAediting_961481(45234812, +), CAediting_961482(45234813, +), CAediting_961483(45234817, +), CAediting_961484(45234822, +), CAediting_961485(45234860, +), CAediting_961486(45234862, +), CAediting_961487(45234866, +), CAediting_961488(45234924, +), CAediting_961489(45234925, +), CAediting_961490(45234930, +), CAediting_961491(45234941, +), CAediting_961492(45234966, +), CAediting_961493(45234970, +), CAediting_961494(45234977, +), CAediting_961495(45234995, +), CAediting_961496(45235010, +), CAediting_961497(45235659, +), CAediting_961498(45235683, +), CAediting_961499(45235690, +), CAediting_961500(45235723, +), CAediting_961501(45235729, +), CAediting_961502(45238023, +), CAediting_961503(45238093, +), CAediting_961504(45238140, +), CAediting_961505(45238164, +), CAediting_961506(45238223, +), CAediting_961507(45238761, +), CAediting_961508(45238789, +), CAediting_961509(45238823, +), CAediting_961510(45238824, +), CAediting_961511(45238864, +), CAediting_961512(45238876, +), CAediting_961513(45238877, +), CAediting_961514(45245869, +), CAediting_961515(45247657, +), CAediting_961516(45253952, +), CAediting_961517(45255036, +), CAediting_961518(45255047, +), CAediting_961519(45255056, +), CAediting_961520(45255086, +), CAediting_961521(45255091, +), CAediting_961522(45255098, +), CAediting_961523(45260773, +), CAediting_961524(45261005, +), CAediting_961525(45261006, +), CAediting_961526(45261020, +), CAediting_961527(45261305, +), CAediting_961528(45262130, +), CAediting_961529(45262253, +), CAediting_961530(45271038, +), CAediting_961531(45271105, +), CAediting_961532(45271115, +), CAediting_961533(45271126, +), CAediting_961534(45271129, +), CAediting_961535(45271133, +), CAediting_961536(45271145, +), CAediting_961537(45271162, +), CAediting_961538(45271171, +), CAediting_961539(45271177, +), CAediting_961540(45271181, +), CAediting_961541(45271197, +), CAediting_961542(45271203, +), CAediting_961543(45271211, +), CAediting_961544(45271212, +), CAediting_961545(45271232, +), CAediting_961546(45271236, +), CAediting_961547(45271423, +), CAediting_961548(45271613, +), CAediting_961549(45271616, +), CAediting_961550(45271621, +), CAediting_961551(45271629, +), CAediting_961552(45272502, +), CAediting_961553(45272504, +), CAediting_961554(45272509, +), CAediting_961555(45272510, +), CAediting_961556(45272515, +), CAediting_961557(45272533, +), CAediting_961558(45272557, +), CAediting_961559(45272590, +), CAediting_961560(45272629, +), CAediting_961561(45272656, +), CAediting_961562(45272666, +), CAediting_961563(45272670, +), CAediting_961564(45272826, +), CAediting_961565(45272859, +), CAediting_961566(45272873, +), CAediting_961567(45272889, +), CAediting_961568(45272897, +), CAediting_961569(45274551, +), CAediting_961570(45274692, +), CAediting_961571(45274796, +), CAediting_961572(45274800, +), CAediting_961573(45274822, +), CAediting_961574(45274844, +), CAediting_961575(45274882, +),

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RNA editing positional annotations for GTF2F2 using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_961398	chr13_45124634_+	intronic
CAediting_961399	chr13_45131715_+	intronic
CAediting_961400	chr13_45131785_+	intronic
CAediting_961401	chr13_45144210_+	intronic
CAediting_961402	chr13_45149234_+	intronic
CAediting_961403	chr13_45149322_+	intronic
CAediting_961404	chr13_45149346_+	intronic
CAediting_961405	chr13_45149358_+	intronic
CAediting_961406	chr13_45149377_+	intronic
CAediting_961407	chr13_45153768_+	intronic
CAediting_961408	chr13_45153777_+	intronic
CAediting_961409	chr13_45153783_+	intronic
CAediting_961410	chr13_45153786_+	intronic
CAediting_961411	chr13_45153792_+	intronic
CAediting_961412	chr13_45153825_+	intronic
CAediting_961413	chr13_45153856_+	intronic
CAediting_961414	chr13_45153857_+	intronic
CAediting_961415	chr13_45153862_+	intronic
CAediting_961416	chr13_45153870_+	intronic
CAediting_961417	chr13_45153874_+	intronic
CAediting_961418	chr13_45153880_+	intronic
CAediting_961419	chr13_45153883_+	intronic
CAediting_961420	chr13_45153897_+	intronic
CAediting_961421	chr13_45153898_+	intronic
CAediting_961422	chr13_45153902_+	intronic
CAediting_961423	chr13_45153915_+	intronic
CAediting_961424	chr13_45153918_+	intronic
CAediting_961425	chr13_45153927_+	intronic
CAediting_961426	chr13_45157783_+	intronic
CAediting_961427	chr13_45159750_+	intronic
CAediting_961428	chr13_45164003_+	intronic
CAediting_961429	chr13_45164007_+	intronic
CAediting_961430	chr13_45164012_+	intronic
CAediting_961431	chr13_45164103_+	intronic
CAediting_961432	chr13_45164457_+	intronic
CAediting_961433	chr13_45164573_+	intronic
CAediting_961434	chr13_45165364_+	intronic
CAediting_961435	chr13_45180907_+	intronic
CAediting_961436	chr13_45180928_+	intronic
CAediting_961437	chr13_45180929_+	intronic
CAediting_961438	chr13_45180930_+	intronic
CAediting_961439	chr13_45180933_+	intronic
CAediting_961440	chr13_45180979_+	intronic
CAediting_961441	chr13_45181019_+	intronic
CAediting_961442	chr13_45181056_+	intronic
CAediting_961443	chr13_45181077_+	intronic
CAediting_961444	chr13_45181116_+	intronic
CAediting_961445	chr13_45182204_+	intronic
CAediting_961446	chr13_45182214_+	intronic
CAediting_961447	chr13_45182230_+	intronic
CAediting_961448	chr13_45182250_+	intronic
CAediting_961449	chr13_45182251_+	intronic
CAediting_961450	chr13_45183904_+	intronic
CAediting_961451	chr13_45184039_+	intronic
CAediting_961452	chr13_45184048_+	intronic
CAediting_961453	chr13_45187128_+	intronic
CAediting_961454	chr13_45195839_+	intronic
CAediting_961455	chr13_45197361_+	intronic
CAediting_961456	chr13_45197388_+	intronic
CAediting_961457	chr13_45197398_+	intronic
CAediting_961458	chr13_45197420_+	intronic
CAediting_961459	chr13_45197429_+	intronic
CAediting_961460	chr13_45203210_+	intronic
CAediting_961461	chr13_45208053_+	ncRNA_intronic
CAediting_961462	chr13_45208057_+	ncRNA_intronic
CAediting_961463	chr13_45216635_+	ncRNA_intronic
CAediting_961464	chr13_45216660_+	ncRNA_intronic
CAediting_961465	chr13_45216771_+	ncRNA_intronic
CAediting_961466	chr13_45217072_+	ncRNA_intronic
CAediting_961467	chr13_45217089_+	ncRNA_intronic
CAediting_961468	chr13_45217137_+	ncRNA_intronic
CAediting_961469	chr13_45217139_+	ncRNA_intronic
CAediting_961470	chr13_45217143_+	ncRNA_intronic
CAediting_961471	chr13_45217179_+	ncRNA_intronic
CAediting_961472	chr13_45217237_+	ncRNA_intronic
CAediting_961473	chr13_45217261_+	ncRNA_intronic
CAediting_961474	chr13_45222989_+	ncRNA_intronic
CAediting_961475	chr13_45222992_+	ncRNA_intronic
CAediting_961476	chr13_45225551_+	ncRNA_intronic
CAediting_961477	chr13_45233656_+	ncRNA_intronic
CAediting_961478	chr13_45234782_+	ncRNA_intronic
CAediting_961479	chr13_45234790_+	ncRNA_intronic
CAediting_961480	chr13_45234791_+	ncRNA_intronic
CAediting_961481	chr13_45234812_+	ncRNA_intronic
CAediting_961482	chr13_45234813_+	ncRNA_intronic
CAediting_961483	chr13_45234817_+	ncRNA_intronic
CAediting_961484	chr13_45234822_+	ncRNA_intronic
CAediting_961485	chr13_45234860_+	ncRNA_intronic
CAediting_961486	chr13_45234862_+	ncRNA_intronic
CAediting_961487	chr13_45234866_+	ncRNA_intronic
CAediting_961488	chr13_45234924_+	ncRNA_intronic
CAediting_961489	chr13_45234925_+	ncRNA_intronic
CAediting_961490	chr13_45234930_+	ncRNA_intronic
CAediting_961491	chr13_45234941_+	ncRNA_intronic
CAediting_961492	chr13_45234966_+	ncRNA_intronic
CAediting_961493	chr13_45234970_+	ncRNA_intronic
CAediting_961494	chr13_45234977_+	ncRNA_intronic
CAediting_961495	chr13_45234995_+	ncRNA_intronic
CAediting_961496	chr13_45235010_+	ncRNA_intronic
CAediting_961497	chr13_45235659_+	ncRNA_intronic
CAediting_961498	chr13_45235683_+	ncRNA_intronic
CAediting_961499	chr13_45235690_+	ncRNA_intronic
CAediting_961500	chr13_45235723_+	ncRNA_intronic
CAediting_961501	chr13_45235729_+	ncRNA_intronic
CAediting_961502	chr13_45238023_+	ncRNA_intronic
CAediting_961503	chr13_45238093_+	ncRNA_intronic
CAediting_961504	chr13_45238140_+	ncRNA_intronic
CAediting_961505	chr13_45238164_+	ncRNA_intronic
CAediting_961506	chr13_45238223_+	ncRNA_intronic
CAediting_961507	chr13_45238761_+	ncRNA_intronic
CAediting_961508	chr13_45238789_+	ncRNA_intronic
CAediting_961509	chr13_45238823_+	ncRNA_intronic
CAediting_961510	chr13_45238824_+	ncRNA_intronic
CAediting_961511	chr13_45238864_+	ncRNA_intronic
CAediting_961512	chr13_45238876_+	ncRNA_intronic
CAediting_961513	chr13_45238877_+	ncRNA_intronic
CAediting_961514	chr13_45245869_+	ncRNA_intronic
CAediting_961515	chr13_45247657_+	ncRNA_intronic
CAediting_961516	chr13_45253952_+	ncRNA_intronic
CAediting_961517	chr13_45255036_+	ncRNA_intronic
CAediting_961518	chr13_45255047_+	ncRNA_intronic
CAediting_961519	chr13_45255056_+	ncRNA_intronic
CAediting_961520	chr13_45255086_+	ncRNA_intronic
CAediting_961521	chr13_45255091_+	ncRNA_intronic
CAediting_961522	chr13_45255098_+	ncRNA_intronic
CAediting_961523	chr13_45260773_+	ncRNA_intronic
CAediting_961524	chr13_45261005_+	ncRNA_intronic
CAediting_961525	chr13_45261006_+	ncRNA_intronic
CAediting_961526	chr13_45261020_+	ncRNA_intronic
CAediting_961527	chr13_45261305_+	ncRNA_intronic
CAediting_961528	chr13_45262130_+	ncRNA_intronic
CAediting_961529	chr13_45262253_+	ncRNA_intronic
CAediting_961530	chr13_45271038_+	intronic
CAediting_961531	chr13_45271105_+	intronic
CAediting_961532	chr13_45271115_+	intronic
CAediting_961533	chr13_45271126_+	intronic
CAediting_961534	chr13_45271129_+	intronic
CAediting_961535	chr13_45271133_+	intronic
CAediting_961536	chr13_45271145_+	intronic
CAediting_961537	chr13_45271162_+	intronic
CAediting_961538	chr13_45271171_+	intronic
CAediting_961539	chr13_45271177_+	intronic
CAediting_961540	chr13_45271181_+	intronic
CAediting_961541	chr13_45271197_+	intronic
CAediting_961542	chr13_45271203_+	intronic
CAediting_961543	chr13_45271211_+	intronic
CAediting_961544	chr13_45271212_+	intronic
CAediting_961545	chr13_45271232_+	intronic
CAediting_961546	chr13_45271236_+	intronic
CAediting_961547	chr13_45271423_+	intronic
CAediting_961548	chr13_45271613_+	intronic
CAediting_961549	chr13_45271616_+	intronic
CAediting_961550	chr13_45271621_+	intronic
CAediting_961551	chr13_45271629_+	intronic
CAediting_961552	chr13_45272502_+	intronic
CAediting_961553	chr13_45272504_+	intronic
CAediting_961554	chr13_45272509_+	intronic
CAediting_961555	chr13_45272510_+	intronic
CAediting_961556	chr13_45272515_+	intronic
CAediting_961557	chr13_45272533_+	intronic
CAediting_961558	chr13_45272557_+	intronic
CAediting_961559	chr13_45272590_+	intronic
CAediting_961560	chr13_45272629_+	intronic
CAediting_961561	chr13_45272656_+	intronic
CAediting_961562	chr13_45272666_+	intronic
CAediting_961563	chr13_45272670_+	intronic
CAediting_961564	chr13_45272826_+	intronic
CAediting_961565	chr13_45272859_+	intronic
CAediting_961566	chr13_45272873_+	intronic
CAediting_961567	chr13_45272889_+	intronic
CAediting_961568	chr13_45272897_+	intronic
CAediting_961569	chr13_45274551_+	intronic
CAediting_961570	chr13_45274692_+	intronic
CAediting_961571	chr13_45274796_+	intronic
CAediting_961572	chr13_45274800_+	intronic
CAediting_961573	chr13_45274822_+	intronic
CAediting_961574	chr13_45274844_+	intronic
CAediting_961575	chr13_45274882_+	intronic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_961398	chr13_45124634_+	SINE	Alu	AluSx3
CAediting_961399	chr13_45131715_+	SINE	Alu	AluJb
CAediting_961400	chr13_45131785_+	SINE	Alu	AluJb
CAediting_961401	chr13_45144210_+	SINE	Alu	AluSq2
CAediting_961402	chr13_45149234_+	SINE	Alu	AluJr
CAediting_961403	chr13_45149322_+	SINE	Alu	AluJr
CAediting_961404	chr13_45149346_+	SINE	Alu	AluJr
CAediting_961405	chr13_45149358_+	SINE	Alu	AluJr
CAediting_961406	chr13_45149377_+	SINE	Alu	AluJr
CAediting_961407	chr13_45153768_+	SINE	Alu	AluSx1
CAediting_961408	chr13_45153777_+	SINE	Alu	AluSx1
CAediting_961409	chr13_45153783_+	SINE	Alu	AluSx1
CAediting_961410	chr13_45153786_+	SINE	Alu	AluSx1
CAediting_961411	chr13_45153792_+	SINE	Alu	AluSx1
CAediting_961412	chr13_45153825_+	SINE	Alu	AluSx1
CAediting_961413	chr13_45153856_+	SINE	Alu	AluSx1
CAediting_961414	chr13_45153857_+	SINE	Alu	AluSx1
CAediting_961415	chr13_45153862_+	SINE	Alu	AluSx1
CAediting_961416	chr13_45153870_+	SINE	Alu	AluSx1
CAediting_961417	chr13_45153874_+	SINE	Alu	AluSx1
CAediting_961418	chr13_45153880_+	SINE	Alu	AluSx1
CAediting_961419	chr13_45153883_+	SINE	Alu	AluSx1
CAediting_961420	chr13_45153897_+	SINE	Alu	AluSx1
CAediting_961421	chr13_45153898_+	SINE	Alu	AluSx1
CAediting_961422	chr13_45153902_+	SINE	Alu	AluSx1
CAediting_961423	chr13_45153915_+	SINE	Alu	AluSx1
CAediting_961424	chr13_45153918_+	SINE	Alu	AluSx1
CAediting_961425	chr13_45153927_+	SINE	Alu	AluSx1
CAediting_961426	chr13_45157783_+	SINE	Alu	AluJr
CAediting_961427	chr13_45159750_+	SINE	Alu	AluSx
CAediting_961428	chr13_45164003_+	SINE	Alu	AluSz6
CAediting_961430	chr13_45164012_+	SINE	Alu	AluSz6
CAediting_961431	chr13_45164103_+	SINE	Alu	AluSz6
CAediting_961432	chr13_45164457_+	SINE	Alu	AluJb
CAediting_961433	chr13_45164573_+	SINE	Alu	AluJb
CAediting_961434	chr13_45165364_+	SINE	Alu	AluYj4
CAediting_961435	chr13_45180907_+	SINE	Alu	AluJb
CAediting_961436	chr13_45180928_+	SINE	Alu	AluJb
CAediting_961437	chr13_45180929_+	SINE	Alu	AluJb
CAediting_961438	chr13_45180930_+	SINE	Alu	AluJb
CAediting_961439	chr13_45180933_+	SINE	Alu	AluJb
CAediting_961440	chr13_45180979_+	SINE	Alu	AluJb
CAediting_961441	chr13_45181019_+	SINE	Alu	AluJb
CAediting_961442	chr13_45181056_+	SINE	Alu	AluJb
CAediting_961443	chr13_45181077_+	SINE	Alu	AluJb
CAediting_961444	chr13_45181116_+	SINE	Alu	AluJb
CAediting_961445	chr13_45182204_+	SINE	Alu	AluSx1
CAediting_961446	chr13_45182214_+	SINE	Alu	AluSx1
CAediting_961447	chr13_45182230_+	SINE	Alu	AluSx1
CAediting_961448	chr13_45182250_+	SINE	Alu	AluSx1
CAediting_961449	chr13_45182251_+	SINE	Alu	AluSx1
CAediting_961450	chr13_45183904_+	SINE	Alu	AluSz
CAediting_961451	chr13_45184039_+	SINE	Alu	AluSz
CAediting_961452	chr13_45184048_+	SINE	Alu	AluSz
CAediting_961453	chr13_45187128_+	SINE	Alu	AluJo
CAediting_961454	chr13_45195839_+	SINE	Alu	AluJb
CAediting_961455	chr13_45197361_+	SINE	Alu	AluSz
CAediting_961456	chr13_45197388_+	SINE	Alu	AluSz
CAediting_961457	chr13_45197398_+	SINE	Alu	AluSz
CAediting_961458	chr13_45197420_+	SINE	Alu	AluSz
CAediting_961459	chr13_45197429_+	SINE	Alu	AluSz
CAediting_961460	chr13_45203210_+	SINE	Alu	AluSz6
CAediting_961461	chr13_45208053_+	SINE	Alu	AluJb
CAediting_961462	chr13_45208057_+	SINE	Alu	AluJb
CAediting_961463	chr13_45216635_+	SINE	Alu	AluSz
CAediting_961464	chr13_45216660_+	SINE	Alu	AluSz
CAediting_961465	chr13_45216771_+	SINE	Alu	AluSz
CAediting_961466	chr13_45217072_+	SINE	Alu	AluSg7
CAediting_961467	chr13_45217089_+	SINE	Alu	AluSg7
CAediting_961468	chr13_45217137_+	SINE	Alu	AluSg7
CAediting_961469	chr13_45217139_+	SINE	Alu	AluSg7
CAediting_961470	chr13_45217143_+	SINE	Alu	AluSg7
CAediting_961471	chr13_45217179_+	SINE	Alu	AluSg7
CAediting_961472	chr13_45217237_+	SINE	Alu	AluSg7
CAediting_961473	chr13_45217261_+	SINE	Alu	AluSg7
CAediting_961474	chr13_45222989_+	SINE	Alu	AluJo
CAediting_961475	chr13_45222992_+	SINE	Alu	AluJo
CAediting_961476	chr13_45225551_+	SINE	Alu	AluSq4
CAediting_961477	chr13_45233656_+	SINE	Alu	AluJb
CAediting_961478	chr13_45234782_+	SINE	Alu	AluSp
CAediting_961479	chr13_45234790_+	SINE	Alu	AluSp
CAediting_961480	chr13_45234791_+	SINE	Alu	AluSp
CAediting_961481	chr13_45234812_+	SINE	Alu	AluSp
CAediting_961482	chr13_45234813_+	SINE	Alu	AluSp
CAediting_961483	chr13_45234817_+	SINE	Alu	AluSp
CAediting_961484	chr13_45234822_+	SINE	Alu	AluSp
CAediting_961485	chr13_45234860_+	SINE	Alu	AluSp
CAediting_961486	chr13_45234862_+	SINE	Alu	AluSp
CAediting_961487	chr13_45234866_+	SINE	Alu	AluSp
CAediting_961488	chr13_45234924_+	SINE	Alu	AluSp
CAediting_961489	chr13_45234925_+	SINE	Alu	AluSp
CAediting_961490	chr13_45234930_+	SINE	Alu	AluSp
CAediting_961491	chr13_45234941_+	SINE	Alu	AluSp
CAediting_961492	chr13_45234966_+	SINE	Alu	AluSp
CAediting_961493	chr13_45234970_+	SINE	Alu	AluSp
CAediting_961494	chr13_45234977_+	SINE	Alu	AluSp
CAediting_961495	chr13_45234995_+	SINE	Alu	AluSp
CAediting_961496	chr13_45235010_+	SINE	Alu	AluSp
CAediting_961497	chr13_45235659_+	SINE	Alu	AluSx1
CAediting_961498	chr13_45235683_+	SINE	Alu	AluSx1
CAediting_961499	chr13_45235690_+	SINE	Alu	AluSx1
CAediting_961500	chr13_45235723_+	SINE	Alu	AluSx1
CAediting_961501	chr13_45235729_+	SINE	Alu	AluSx1
CAediting_961502	chr13_45238023_+	SINE	Alu	AluSx
CAediting_961503	chr13_45238093_+	SINE	Alu	AluSx
CAediting_961504	chr13_45238140_+	SINE	Alu	AluSx
CAediting_961505	chr13_45238164_+	SINE	Alu	AluSx
CAediting_961506	chr13_45238223_+	SINE	Alu	AluSx
CAediting_961507	chr13_45238761_+	SINE	Alu	AluSp
CAediting_961508	chr13_45238789_+	SINE	Alu	AluSp
CAediting_961509	chr13_45238823_+	SINE	Alu	AluSp
CAediting_961510	chr13_45238824_+	SINE	Alu	AluSp
CAediting_961511	chr13_45238864_+	SINE	Alu	AluSp
CAediting_961512	chr13_45238876_+	SINE	Alu	AluSp
CAediting_961513	chr13_45238877_+	SINE	Alu	AluSp
CAediting_961514	chr13_45245869_+	SINE	Alu	AluY
CAediting_961515	chr13_45247657_+	SINE	Alu	AluSc8
CAediting_961516	chr13_45253952_+	SINE	Alu	AluY
CAediting_961517	chr13_45255036_+	SINE	Alu	AluSq10
CAediting_961518	chr13_45255047_+	SINE	Alu	AluSq10
CAediting_961519	chr13_45255056_+	SINE	Alu	AluSq10
CAediting_961520	chr13_45255086_+	SINE	Alu	AluSq10
CAediting_961521	chr13_45255091_+	SINE	Alu	AluSq10
CAediting_961522	chr13_45255098_+	SINE	Alu	AluSq10
CAediting_961523	chr13_45260773_+	SINE	Alu	AluJr4
CAediting_961524	chr13_45261005_+	SINE	Alu	AluSx
CAediting_961525	chr13_45261006_+	SINE	Alu	AluSx
CAediting_961526	chr13_45261020_+	SINE	Alu	AluSx
CAediting_961527	chr13_45261305_+	SINE	Alu	AluSc8
CAediting_961528	chr13_45262130_+	SINE	Alu	AluJr
CAediting_961529	chr13_45262253_+	SINE	Alu	AluJr
CAediting_961530	chr13_45271038_+	SINE	Alu	AluY
CAediting_961531	chr13_45271105_+	SINE	Alu	AluY
CAediting_961532	chr13_45271115_+	SINE	Alu	AluY
CAediting_961533	chr13_45271126_+	SINE	Alu	AluY
CAediting_961534	chr13_45271129_+	SINE	Alu	AluY
CAediting_961535	chr13_45271133_+	SINE	Alu	AluY
CAediting_961536	chr13_45271145_+	SINE	Alu	AluY
CAediting_961537	chr13_45271162_+	SINE	Alu	AluY
CAediting_961538	chr13_45271171_+	SINE	Alu	AluY
CAediting_961539	chr13_45271177_+	SINE	Alu	AluY
CAediting_961540	chr13_45271181_+	SINE	Alu	AluY
CAediting_961541	chr13_45271197_+	SINE	Alu	AluY
CAediting_961542	chr13_45271203_+	SINE	Alu	AluY
CAediting_961543	chr13_45271211_+	SINE	Alu	AluY
CAediting_961544	chr13_45271212_+	SINE	Alu	AluY
CAediting_961545	chr13_45271232_+	SINE	Alu	AluY
CAediting_961546	chr13_45271236_+	SINE	Alu	AluY
CAediting_961547	chr13_45271423_+	SINE	Alu	AluSx1
CAediting_961548	chr13_45271613_+	SINE	Alu	AluSx
CAediting_961549	chr13_45271616_+	SINE	Alu	AluSx
CAediting_961550	chr13_45271621_+	SINE	Alu	AluSx
CAediting_961551	chr13_45271629_+	SINE	Alu	AluSx
CAediting_961552	chr13_45272502_+	SINE	Alu	AluJb
CAediting_961553	chr13_45272504_+	SINE	Alu	AluJb
CAediting_961554	chr13_45272509_+	SINE	Alu	AluJb
CAediting_961555	chr13_45272510_+	SINE	Alu	AluJb
CAediting_961556	chr13_45272515_+	SINE	Alu	AluJb
CAediting_961557	chr13_45272533_+	SINE	Alu	AluJb
CAediting_961558	chr13_45272557_+	SINE	Alu	AluJb
CAediting_961559	chr13_45272590_+	SINE	Alu	AluJb
CAediting_961560	chr13_45272629_+	SINE	Alu	AluJb
CAediting_961561	chr13_45272656_+	SINE	Alu	AluJb
CAediting_961562	chr13_45272666_+	SINE	Alu	AluJb
CAediting_961563	chr13_45272670_+	SINE	Alu	AluJb
CAediting_961564	chr13_45272826_+	SINE	Alu	AluJr4
CAediting_961565	chr13_45272859_+	SINE	Alu	AluJr4
CAediting_961566	chr13_45272873_+	SINE	Alu	AluJr4
CAediting_961567	chr13_45272889_+	SINE	Alu	AluJr4
CAediting_961568	chr13_45272897_+	SINE	Alu	AluJr4
CAediting_961569	chr13_45274551_+	SINE	Alu	AluSc8
CAediting_961570	chr13_45274692_+	SINE	Alu	AluSz6
CAediting_961571	chr13_45274796_+	SINE	Alu	AluSz6
CAediting_961572	chr13_45274800_+	SINE	Alu	AluSz6
CAediting_961573	chr13_45274822_+	SINE	Alu	AluSz6
CAediting_961574	chr13_45274844_+	SINE	Alu	AluSz6
CAediting_961575	chr13_45274882_+	SINE	Alu	AluSz6

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RNA A-to-I editing events in the alternative splicing sites for GTF2F2

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000188342.10.GTF2F2.

Correlation between RNA A-to-I editing and PSI for ENSG00000188342.10.GTF2F2.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for GTF2F2

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

STAD.CAediting_961538.ENSG00000188342.GTF2F2.png
Soverview

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Protein coding region RNA A-to-I editings for GTF2F2

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for GTF2F2

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for GTF2F2

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST

ENST type

RNA structure without RNA A-to-I editing.

RNA structure with RNA A-to-I editing.

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID

ENST

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

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Relation with ADAR for GTF2F2

Correlation between ADAR gene expression and RNA editing frequency

Cancer

CAeditomID

position

ADAR1 (p-val)

ADAR1 (coeff.)

ADAR2 (p-val)

ADAR2 (coeff.)

ADAR3 (p-val)

ADAR3 (coeff.)

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Relation with cancer stages for GTF2F2

Correlation between Cancer stages and RNA editing frequency

Cancer

Stage_type

CAeditomID

position

P-val

Coeff.

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Relation with survival for GTF2F2

Correlation between RNA editing and survival

Cancer

CAeditomID

position

KMpvalue

Coxpvalue

CoxHR

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RelatedDrugs for GTF2F2

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for GTF2F2

Diseases associated with this gene.
(DisGeNet 7.0)

Gene

Disease ID

Disease name

# pubmeds

Source

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene