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Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with cancer stages

Soverview

Relation with survival state

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene

Editing gene: OSTM1 (CAeditome ID:28962)

Gene summary for OSTM1

check button Gene summary
Gene informationGene symbol

OSTM1

Gene ID

28962

Gene nameosteoclastogenesis associated transmembrane protein 1
SynonymsGIPN|GL|HSPC019|OPTB5
Cytomap

6q21

Type of geneprotein-coding
Descriptionosteopetrosis-associated transmembrane protein 1CLCN7 accessory beta subunitGAIP-interacting protein N terminuschloride channel 7 beta subunitgrey-lethal osteopetrosisosteopetrosis associated transmembrane protein 1
Modification date20210518
UniProtAcc

Q86WC4

Context

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID

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RNA A-to-I events for OSTM1

check buttonRNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.
all structure

check button RNA editing frequencies across 33 cancers of gene: ENSG00000081087.13
boxplot

check button RNA A-to-I editing events in Cancer.
CAediting_498009(108042172, -), CAediting_498010(108042173, -), CAediting_498011(108042175, -), CAediting_498012(108042187, -), CAediting_498013(108042188, -), CAediting_498014(108042197, -), CAediting_498015(108042210, -), CAediting_498016(108042212, -), CAediting_498017(108042214, -), CAediting_498018(108042215, -), CAediting_498019(108042220, -), CAediting_498020(108042227, -), CAediting_498021(108042228, -), CAediting_498022(108042239, -), CAediting_498023(108042240, -), CAediting_498024(108042249, -), CAediting_498025(108042262, -), CAediting_498026(108042264, -), CAediting_498027(108042266, -), CAediting_498028(108042416, -), CAediting_498029(108042417, -), CAediting_498030(108042427, -), CAediting_498031(108042443, -), CAediting_498032(108042451, -), CAediting_498033(108042463, -), CAediting_498034(108042473, -), CAediting_498035(108042476, -), CAediting_498036(108042492, -), CAediting_498037(108042505, -), CAediting_498038(108042513, -), CAediting_498039(108042537, -), CAediting_498040(108042544, -), CAediting_498041(108042548, -), CAediting_498042(108042554, -), CAediting_498043(108042563, -), CAediting_498044(108042564, -), CAediting_498045(108042572, -), CAediting_498046(108042580, -), CAediting_498047(108042583, -), CAediting_498048(108042586, -), CAediting_498049(108042589, -), CAediting_498050(108042592, -), CAediting_498051(108042593, -), CAediting_498052(108042595, -), CAediting_498053(108042607, -), CAediting_498054(108042609, -), CAediting_498055(108042610, -), CAediting_498056(108042611, -), CAediting_498057(108042615, -), CAediting_498058(108042617, -), CAediting_498059(108042619, -), CAediting_498060(108042622, -), CAediting_498061(108042629, -), CAediting_498062(108042632, -), CAediting_498063(108042640, -), CAediting_498064(108042648, -), CAediting_498065(108042658, -), CAediting_498066(108042661, -), CAediting_498067(108042685, -), CAediting_498068(108042693, -), CAediting_498069(108042701, -), CAediting_498070(108046550, -), CAediting_498071(108052253, -), CAediting_498072(108052267, -), CAediting_498073(108052621, -), CAediting_498074(108052622, -), CAediting_498075(108053626, -), CAediting_498076(108053630, -), CAediting_498077(108053642, -), CAediting_498078(108053643, -), CAediting_498079(108053644, -), CAediting_498080(108053659, -), CAediting_498081(108053669, -), CAediting_498082(108053670, -), CAediting_498083(108053712, -), CAediting_498084(108053717, -), CAediting_498085(108053738, -), CAediting_498086(108053739, -), CAediting_498087(108053741, -), CAediting_498088(108057037, -), CAediting_498089(108057106, -), CAediting_498090(108057142, -), CAediting_498091(108057167, -), CAediting_498092(108057177, -), CAediting_498093(108057195, -), CAediting_498094(108057215, -), CAediting_498095(108057222, -), CAediting_498096(108060507, -), CAediting_498097(108060526, -), CAediting_498098(108060593, -), CAediting_498099(108060608, -), CAediting_498100(108060617, -), CAediting_498101(108060634, -), CAediting_498102(108060657, -), CAediting_498103(108060672, -), CAediting_498104(108060683, -), CAediting_498105(108060685, -), CAediting_498106(108061568, -), CAediting_498107(108061573, -), CAediting_498108(108061598, -), CAediting_498109(108061634, -), CAediting_498110(108061636, -), CAediting_498111(108061664, -), CAediting_498112(108061666, -), CAediting_498113(108061690, -), CAediting_498114(108061720, -), CAediting_498115(108061761, -), CAediting_498116(108061762, -), CAediting_498117(108061775, -), CAediting_498118(108061802, -), CAediting_498119(108061822, -), CAediting_498120(108061824, -), CAediting_498121(108061830, -), CAediting_498122(108062658, -), CAediting_498123(108062667, -), CAediting_498124(108062677, -), CAediting_498125(108062692, -), CAediting_498126(108062693, -), CAediting_498127(108062696, -), CAediting_498128(108062701, -), CAediting_498129(108062723, -), CAediting_498130(108062736, -), CAediting_498131(108062746, -), CAediting_498132(108062747, -), CAediting_498133(108062800, -), CAediting_498134(108062801, -), CAediting_498135(108062807, -), CAediting_498136(108062809, -), CAediting_498137(108063219, -), CAediting_498138(108063298, -), CAediting_498139(108066505, -), CAediting_498140(108066531, -), CAediting_498141(108066535, -), CAediting_498142(108066548, -), CAediting_498143(108066560, -), CAediting_498144(108066632, -), CAediting_498145(108066653, -), CAediting_498146(108066695, -), CAediting_498147(108066720, -), CAediting_498148(108066721, -), CAediting_498149(108066732, -), CAediting_498150(108066749, -), CAediting_498151(108067940, -), CAediting_498152(108068052, -), CAediting_498153(108068116, -), CAediting_498154(108068137, -), CAediting_498155(108068169, -), CAediting_498156(108068172, -), CAediting_498157(108068173, -), CAediting_498158(108068204, -), CAediting_498159(108070106, -), CAediting_498160(108070235, -), CAediting_498161(108070999, -), CAediting_498162(108071112, -), CAediting_498163(108071150, -), CAediting_498164(108071402, -), CAediting_498165(108071403, -), CAediting_498166(108071430, -), CAediting_498167(108071434, -), CAediting_498168(108071516, -), CAediting_498169(108071517, -), CAediting_498170(108071608, -), CAediting_498171(108072377, -), CAediting_498172(108072389, -), CAediting_498173(108072413, -), CAediting_498174(108072416, -), CAediting_498175(108072442, -), CAediting_498176(108072847, -), CAediting_498177(108072878, -), CAediting_498178(108073083, -),

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RNA editing positional annotations for OSTM1 using Annovar

check button Protein coding RNA editing(s).
CAeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred

check button Gene structure information of RNA editing(s).
CAeditome IDPositionVariant type
CAediting_498009chr6_108042172_-ncRNA_exonic
CAediting_498010chr6_108042173_-ncRNA_exonic
CAediting_498011chr6_108042175_-ncRNA_exonic
CAediting_498012chr6_108042187_-ncRNA_exonic
CAediting_498013chr6_108042188_-ncRNA_exonic
CAediting_498014chr6_108042197_-ncRNA_exonic
CAediting_498015chr6_108042210_-ncRNA_exonic
CAediting_498016chr6_108042212_-ncRNA_exonic
CAediting_498017chr6_108042214_-ncRNA_exonic
CAediting_498018chr6_108042215_-ncRNA_exonic
CAediting_498019chr6_108042220_-ncRNA_exonic
CAediting_498020chr6_108042227_-ncRNA_exonic
CAediting_498021chr6_108042228_-ncRNA_exonic
CAediting_498022chr6_108042239_-ncRNA_exonic
CAediting_498023chr6_108042240_-ncRNA_exonic
CAediting_498024chr6_108042249_-ncRNA_exonic
CAediting_498025chr6_108042262_-ncRNA_exonic
CAediting_498026chr6_108042264_-ncRNA_exonic
CAediting_498027chr6_108042266_-ncRNA_splicing
CAediting_498028chr6_108042416_-ncRNA_intronic
CAediting_498029chr6_108042417_-ncRNA_intronic
CAediting_498030chr6_108042427_-ncRNA_intronic
CAediting_498031chr6_108042443_-ncRNA_intronic
CAediting_498032chr6_108042451_-ncRNA_intronic
CAediting_498033chr6_108042463_-ncRNA_intronic
CAediting_498034chr6_108042473_-ncRNA_intronic
CAediting_498035chr6_108042476_-ncRNA_intronic
CAediting_498036chr6_108042492_-ncRNA_intronic
CAediting_498037chr6_108042505_-ncRNA_intronic
CAediting_498038chr6_108042513_-ncRNA_intronic
CAediting_498039chr6_108042537_-ncRNA_intronic
CAediting_498040chr6_108042544_-ncRNA_intronic
CAediting_498041chr6_108042548_-ncRNA_intronic
CAediting_498042chr6_108042554_-ncRNA_intronic
CAediting_498043chr6_108042563_-ncRNA_intronic
CAediting_498044chr6_108042564_-ncRNA_intronic
CAediting_498045chr6_108042572_-ncRNA_exonic
CAediting_498046chr6_108042580_-ncRNA_exonic
CAediting_498047chr6_108042583_-ncRNA_exonic
CAediting_498048chr6_108042586_-ncRNA_exonic
CAediting_498049chr6_108042589_-ncRNA_exonic
CAediting_498050chr6_108042592_-ncRNA_exonic
CAediting_498051chr6_108042593_-ncRNA_exonic
CAediting_498052chr6_108042595_-ncRNA_exonic
CAediting_498053chr6_108042607_-ncRNA_exonic
CAediting_498054chr6_108042609_-ncRNA_exonic
CAediting_498055chr6_108042610_-ncRNA_exonic
CAediting_498056chr6_108042611_-ncRNA_exonic
CAediting_498057chr6_108042615_-ncRNA_exonic
CAediting_498058chr6_108042617_-ncRNA_exonic
CAediting_498059chr6_108042619_-ncRNA_exonic
CAediting_498060chr6_108042622_-ncRNA_exonic
CAediting_498061chr6_108042629_-ncRNA_exonic
CAediting_498062chr6_108042632_-ncRNA_exonic
CAediting_498063chr6_108042640_-ncRNA_exonic
CAediting_498064chr6_108042648_-ncRNA_exonic
CAediting_498065chr6_108042658_-ncRNA_exonic
CAediting_498066chr6_108042661_-ncRNA_exonic
CAediting_498067chr6_108042685_-ncRNA_exonic
CAediting_498068chr6_108042693_-ncRNA_exonic
CAediting_498069chr6_108042701_-ncRNA_exonic
CAediting_498070chr6_108046550_-ncRNA_intronic
CAediting_498071chr6_108052253_-intronic
CAediting_498072chr6_108052267_-intronic
CAediting_498073chr6_108052621_-intronic
CAediting_498074chr6_108052622_-intronic
CAediting_498075chr6_108053626_-intronic
CAediting_498076chr6_108053630_-intronic
CAediting_498077chr6_108053642_-intronic
CAediting_498078chr6_108053643_-intronic
CAediting_498079chr6_108053644_-intronic
CAediting_498080chr6_108053659_-intronic
CAediting_498081chr6_108053669_-intronic
CAediting_498082chr6_108053670_-intronic
CAediting_498083chr6_108053712_-intronic
CAediting_498084chr6_108053717_-intronic
CAediting_498085chr6_108053738_-intronic
CAediting_498086chr6_108053739_-intronic
CAediting_498087chr6_108053741_-intronic
CAediting_498088chr6_108057037_-intronic
CAediting_498089chr6_108057106_-intronic
CAediting_498090chr6_108057142_-intronic
CAediting_498091chr6_108057167_-intronic
CAediting_498092chr6_108057177_-intronic
CAediting_498093chr6_108057195_-intronic
CAediting_498094chr6_108057215_-intronic
CAediting_498095chr6_108057222_-intronic
CAediting_498096chr6_108060507_-intronic
CAediting_498097chr6_108060526_-intronic
CAediting_498098chr6_108060593_-intronic
CAediting_498099chr6_108060608_-intronic
CAediting_498100chr6_108060617_-intronic
CAediting_498101chr6_108060634_-intronic
CAediting_498102chr6_108060657_-intronic
CAediting_498103chr6_108060672_-intronic
CAediting_498104chr6_108060683_-intronic
CAediting_498105chr6_108060685_-intronic
CAediting_498106chr6_108061568_-intronic
CAediting_498107chr6_108061573_-intronic
CAediting_498108chr6_108061598_-intronic
CAediting_498109chr6_108061634_-intronic
CAediting_498110chr6_108061636_-intronic
CAediting_498111chr6_108061664_-intronic
CAediting_498112chr6_108061666_-intronic
CAediting_498113chr6_108061690_-intronic
CAediting_498114chr6_108061720_-intronic
CAediting_498115chr6_108061761_-intronic
CAediting_498116chr6_108061762_-intronic
CAediting_498117chr6_108061775_-intronic
CAediting_498118chr6_108061802_-intronic
CAediting_498119chr6_108061822_-intronic
CAediting_498120chr6_108061824_-intronic
CAediting_498121chr6_108061830_-intronic
CAediting_498122chr6_108062658_-intronic
CAediting_498123chr6_108062667_-intronic
CAediting_498124chr6_108062677_-intronic
CAediting_498125chr6_108062692_-intronic
CAediting_498126chr6_108062693_-intronic
CAediting_498127chr6_108062696_-intronic
CAediting_498128chr6_108062701_-intronic
CAediting_498129chr6_108062723_-intronic
CAediting_498130chr6_108062736_-intronic
CAediting_498131chr6_108062746_-intronic
CAediting_498132chr6_108062747_-intronic
CAediting_498133chr6_108062800_-intronic
CAediting_498134chr6_108062801_-intronic
CAediting_498135chr6_108062807_-intronic
CAediting_498136chr6_108062809_-intronic
CAediting_498137chr6_108063219_-intronic
CAediting_498138chr6_108063298_-intronic
CAediting_498139chr6_108066505_-ncRNA_intronic
CAediting_498140chr6_108066531_-ncRNA_intronic
CAediting_498141chr6_108066535_-ncRNA_intronic
CAediting_498142chr6_108066548_-ncRNA_intronic
CAediting_498143chr6_108066560_-ncRNA_intronic
CAediting_498144chr6_108066632_-ncRNA_intronic
CAediting_498145chr6_108066653_-ncRNA_intronic
CAediting_498146chr6_108066695_-ncRNA_intronic
CAediting_498147chr6_108066720_-ncRNA_intronic
CAediting_498148chr6_108066721_-ncRNA_intronic
CAediting_498149chr6_108066732_-ncRNA_intronic
CAediting_498150chr6_108066749_-ncRNA_intronic
CAediting_498151chr6_108067940_-ncRNA_intronic
CAediting_498152chr6_108068052_-ncRNA_intronic
CAediting_498153chr6_108068116_-ncRNA_intronic
CAediting_498154chr6_108068137_-ncRNA_intronic
CAediting_498155chr6_108068169_-ncRNA_intronic
CAediting_498156chr6_108068172_-ncRNA_intronic
CAediting_498157chr6_108068173_-ncRNA_intronic
CAediting_498158chr6_108068204_-ncRNA_intronic
CAediting_498159chr6_108070106_-ncRNA_intronic
CAediting_498160chr6_108070235_-ncRNA_intronic
CAediting_498161chr6_108070999_-ncRNA_intronic
CAediting_498162chr6_108071112_-ncRNA_intronic
CAediting_498163chr6_108071150_-ncRNA_intronic
CAediting_498164chr6_108071402_-ncRNA_intronic
CAediting_498165chr6_108071403_-ncRNA_intronic
CAediting_498166chr6_108071430_-ncRNA_intronic
CAediting_498167chr6_108071434_-ncRNA_intronic
CAediting_498168chr6_108071516_-ncRNA_intronic
CAediting_498169chr6_108071517_-ncRNA_intronic
CAediting_498170chr6_108071608_-ncRNA_intronic
CAediting_498171chr6_108072377_-ncRNA_intronic
CAediting_498172chr6_108072389_-ncRNA_intronic
CAediting_498173chr6_108072413_-ncRNA_intronic
CAediting_498174chr6_108072416_-ncRNA_intronic
CAediting_498175chr6_108072442_-ncRNA_intronic
CAediting_498176chr6_108072847_-ncRNA_intronic
CAediting_498177chr6_108072878_-ncRNA_intronic
CAediting_498178chr6_108073083_-ncRNA_intronic

check button Repat-regional RNA editing(s).
CAeditome IDPositionRepeat familyRepeat sub familyRepeat name
CAediting_498009chr6_108042172_-SINEAluFLAM_C
CAediting_498010chr6_108042173_-SINEAluFLAM_C
CAediting_498011chr6_108042175_-SINEAluFLAM_C
CAediting_498012chr6_108042187_-SINEAluFLAM_C
CAediting_498013chr6_108042188_-SINEAluFLAM_C
CAediting_498014chr6_108042197_-SINEAluFLAM_C
CAediting_498015chr6_108042210_-SINEAluFLAM_C
CAediting_498016chr6_108042212_-SINEAluFLAM_C
CAediting_498017chr6_108042214_-SINEAluFLAM_C
CAediting_498018chr6_108042215_-SINEAluFLAM_C
CAediting_498019chr6_108042220_-SINEAluFLAM_C
CAediting_498020chr6_108042227_-SINEAluFLAM_C
CAediting_498021chr6_108042228_-SINEAluFLAM_C
CAediting_498022chr6_108042239_-SINEAluFLAM_C
CAediting_498023chr6_108042240_-SINEAluFLAM_C
CAediting_498024chr6_108042249_-SINEAluFLAM_C
CAediting_498025chr6_108042262_-SINEAluFLAM_C
CAediting_498026chr6_108042264_-SINEAluFLAM_C
CAediting_498027chr6_108042266_-SINEAluFLAM_C
CAediting_498028chr6_108042416_-SINEAluAluJb
CAediting_498029chr6_108042417_-SINEAluAluJb
CAediting_498030chr6_108042427_-SINEAluAluJb
CAediting_498031chr6_108042443_-SINEAluAluJb
CAediting_498032chr6_108042451_-SINEAluAluJb
CAediting_498033chr6_108042463_-SINEAluAluJb
CAediting_498034chr6_108042473_-SINEAluAluJb
CAediting_498035chr6_108042476_-SINEAluAluJb
CAediting_498036chr6_108042492_-SINEAluAluJb
CAediting_498037chr6_108042505_-SINEAluAluJb
CAediting_498038chr6_108042513_-SINEAluAluJb
CAediting_498039chr6_108042537_-SINEAluAluJb
CAediting_498040chr6_108042544_-SINEAluAluJb
CAediting_498041chr6_108042548_-SINEAluAluJb
CAediting_498042chr6_108042554_-SINEAluAluJb
CAediting_498043chr6_108042563_-SINEAluAluJb
CAediting_498044chr6_108042564_-SINEAluAluJb
CAediting_498045chr6_108042572_-SINEAluAluJb
CAediting_498046chr6_108042580_-SINEAluAluJb
CAediting_498047chr6_108042583_-SINEAluAluJb
CAediting_498048chr6_108042586_-SINEAluAluJb
CAediting_498049chr6_108042589_-SINEAluAluJb
CAediting_498050chr6_108042592_-SINEAluAluJb
CAediting_498051chr6_108042593_-SINEAluAluJb
CAediting_498052chr6_108042595_-SINEAluAluJb
CAediting_498053chr6_108042607_-SINEAluAluJb
CAediting_498054chr6_108042609_-SINEAluAluJb
CAediting_498055chr6_108042610_-SINEAluAluJb
CAediting_498056chr6_108042611_-SINEAluAluJb
CAediting_498057chr6_108042615_-SINEAluAluJb
CAediting_498058chr6_108042617_-SINEAluAluJb
CAediting_498059chr6_108042619_-SINEAluAluJb
CAediting_498060chr6_108042622_-SINEAluAluJb
CAediting_498061chr6_108042629_-SINEAluAluJb
CAediting_498062chr6_108042632_-SINEAluAluJb
CAediting_498063chr6_108042640_-SINEAluAluJb
CAediting_498064chr6_108042648_-SINEAluAluJb
CAediting_498065chr6_108042658_-SINEAluAluJb
CAediting_498066chr6_108042661_-SINEAluAluJb
CAediting_498067chr6_108042685_-SINEAluAluJb
CAediting_498068chr6_108042693_-SINEAluAluJb
CAediting_498069chr6_108042701_-SINEAluAluJb
CAediting_498070chr6_108046550_-SINEAluAluSc8
CAediting_498071chr6_108052253_-SINEAluAluY
CAediting_498072chr6_108052267_-SINEAluAluY
CAediting_498073chr6_108052621_-SINEAluFLAM_C
CAediting_498074chr6_108052622_-SINEAluFLAM_C
CAediting_498075chr6_108053626_-SINEAluAluSz
CAediting_498076chr6_108053630_-SINEAluAluSz
CAediting_498077chr6_108053642_-SINEAluAluSz
CAediting_498078chr6_108053643_-SINEAluAluSz
CAediting_498079chr6_108053644_-SINEAluAluSz
CAediting_498080chr6_108053659_-SINEAluAluSz
CAediting_498081chr6_108053669_-SINEAluAluSz
CAediting_498082chr6_108053670_-SINEAluAluSz
CAediting_498083chr6_108053712_-SINEAluAluSz
CAediting_498084chr6_108053717_-SINEAluAluSz
CAediting_498085chr6_108053738_-SINEAluAluSz
CAediting_498086chr6_108053739_-SINEAluAluSz
CAediting_498087chr6_108053741_-SINEAluAluSz
CAediting_498088chr6_108057037_-SINEAluAluJb
CAediting_498089chr6_108057106_-SINEAluAluJb
CAediting_498090chr6_108057142_-SINEAluAluJb
CAediting_498091chr6_108057167_-SINEAluAluJb
CAediting_498092chr6_108057177_-SINEAluAluJb
CAediting_498093chr6_108057195_-SINEAluAluJb
CAediting_498094chr6_108057215_-SINEAluAluJb
CAediting_498095chr6_108057222_-SINEAluAluJb
CAediting_498096chr6_108060507_-SINEAluAluJb
CAediting_498097chr6_108060526_-SINEAluAluJb
CAediting_498098chr6_108060593_-SINEAluAluJb
CAediting_498099chr6_108060608_-SINEAluAluJb
CAediting_498100chr6_108060617_-SINEAluAluJb
CAediting_498101chr6_108060634_-SINEAluAluJb
CAediting_498102chr6_108060657_-SINEAluAluJb
CAediting_498103chr6_108060672_-SINEAluAluJb
CAediting_498104chr6_108060683_-SINEAluAluJb
CAediting_498105chr6_108060685_-SINEAluAluJb
CAediting_498106chr6_108061568_-SINEAluAluJo
CAediting_498107chr6_108061573_-SINEAluAluJo
CAediting_498108chr6_108061598_-SINEAluAluJo
CAediting_498109chr6_108061634_-SINEAluAluJo
CAediting_498110chr6_108061636_-SINEAluAluJo
CAediting_498111chr6_108061664_-SINEAluAluJo
CAediting_498112chr6_108061666_-SINEAluAluJo
CAediting_498113chr6_108061690_-SINEAluAluJo
CAediting_498114chr6_108061720_-SINEAluAluJo
CAediting_498115chr6_108061761_-SINEAluAluJo
CAediting_498116chr6_108061762_-SINEAluAluJo
CAediting_498117chr6_108061775_-SINEAluAluJo
CAediting_498118chr6_108061802_-SINEAluAluJo
CAediting_498119chr6_108061822_-SINEAluAluJo
CAediting_498120chr6_108061824_-SINEAluAluJo
CAediting_498121chr6_108061830_-SINEAluAluJo
CAediting_498122chr6_108062658_-SINEAluAluJb
CAediting_498123chr6_108062667_-SINEAluAluJb
CAediting_498124chr6_108062677_-SINEAluAluJb
CAediting_498125chr6_108062692_-SINEAluAluJb
CAediting_498126chr6_108062693_-SINEAluAluJb
CAediting_498127chr6_108062696_-SINEAluAluJb
CAediting_498128chr6_108062701_-SINEAluAluJb
CAediting_498129chr6_108062723_-SINEAluAluJb
CAediting_498130chr6_108062736_-SINEAluAluJb
CAediting_498131chr6_108062746_-SINEAluAluJb
CAediting_498132chr6_108062747_-SINEAluAluJb
CAediting_498133chr6_108062800_-SINEAluAluJb
CAediting_498134chr6_108062801_-SINEAluAluJb
CAediting_498135chr6_108062807_-SINEAluAluJb
CAediting_498136chr6_108062809_-SINEAluAluJb
CAediting_498137chr6_108063219_-SINEAluAluJo
CAediting_498138chr6_108063298_-SINEAluAluJo
CAediting_498139chr6_108066505_-LINEL2L2
CAediting_498140chr6_108066531_-LINEL2L2
CAediting_498141chr6_108066535_-LINEL2L2
CAediting_498142chr6_108066548_-LINEL2L2
CAediting_498143chr6_108066560_-LINEL2L2
CAediting_498144chr6_108066632_-LINEL2L2
CAediting_498145chr6_108066653_-LINEL2L2
CAediting_498146chr6_108066695_-LINEL2L2
CAediting_498147chr6_108066720_-LINEL2L2
CAediting_498148chr6_108066721_-LINEL2L2
CAediting_498149chr6_108066732_-LINEL2L2
CAediting_498150chr6_108066749_-LINEL2L2
CAediting_498151chr6_108067940_-LINEL2L2c
CAediting_498152chr6_108068052_-LINEL2L2c
CAediting_498153chr6_108068116_-LINEL2L2c
CAediting_498154chr6_108068137_-LINEL2L2c
CAediting_498155chr6_108068169_-LINEL2L2c
CAediting_498156chr6_108068172_-LINEL2L2c
CAediting_498157chr6_108068173_-LINEL2L2c
CAediting_498158chr6_108068204_-LINEL2L2c
CAediting_498159chr6_108070106_-SINEAluAluSz6
CAediting_498160chr6_108070235_-SINEAluAluSz6
CAediting_498161chr6_108070999_-SINEAluAluYj4
CAediting_498162chr6_108071112_-SINEAluAluYj4
CAediting_498163chr6_108071150_-SINEAluAluYj4
CAediting_498164chr6_108071402_-SINEAluAluSx
CAediting_498165chr6_108071403_-SINEAluAluSx
CAediting_498166chr6_108071430_-SINEAluAluSx
CAediting_498167chr6_108071434_-SINEAluAluSx
CAediting_498168chr6_108071516_-SINEAluAluSx
CAediting_498169chr6_108071517_-SINEAluAluSx
CAediting_498170chr6_108071608_-SINEAluAluSx
CAediting_498171chr6_108072377_-SINEAluAluSz
CAediting_498172chr6_108072389_-SINEAluAluSz
CAediting_498173chr6_108072413_-SINEAluAluSz
CAediting_498174chr6_108072416_-SINEAluAluSz
CAediting_498175chr6_108072442_-SINEAluAluSz
CAediting_498176chr6_108072847_-SINEAluAluSc8
CAediting_498177chr6_108072878_-SINEAluAluSc8
CAediting_498178chr6_108073083_-SINEAluAluSx

Top

RNA A-to-I editing events in the alternative splicing sites for OSTM1

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeCAeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength
IRCAediting_498025chr6_108042262_-108042262:1080422843SS3+0iTTTTTTTTTTTTTTTTGTAGAGA10.07TTTTTTTTTTTTTTTTGTAGAGG9.79
IRCAediting_498026chr6_108042264_-108042262:1080422843SS1+0iTTTTTTTTTTTTTTTTGTAGAGA10.07TTTTTTTTTTTTTTTTGTAGGGA11.2
IRCAediting_498027chr6_108042266_-108042262:1080422843SS0+2iTTTTTTTTTTTTTTTTGTAGAGA10.07TTTTTTTTTTTTTTTTGTGGAGA2.11
IRCAediting_498043chr6_108042563_-108042560:1080425685SS0+3iTGGTAAGTG-17.11TGGTAGGTG-23.4
IRCAediting_498044chr6_108042564_-108042560:1080425685SS0+2iTGGTAAGTG-17.11TGGTGAGTG-16.57
IRCAediting_498045chr6_108042572_-108042568:1080425765SS0+2iGGGTATGGT-16.37GGGTGTGGT-15.83

check button Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000081087.13.OSTM1.
boxplot

check button Correlation between RNA A-to-I editing and PSI for ENSG00000081087.13.OSTM1.
boxplot

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for OSTM1

check button Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.
boxplot

check button Correlation between RNA A-to-I editing and gene expression.
boxplot

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.
BLCA.CAediting_498067.ENSG00000081087.OSTM1.png
Soverview
ESCA.CAediting_498022.ENSG00000081087.OSTM1.png
Soverview
ESCA.CAediting_498024.ENSG00000081087.OSTM1.png
Soverview
ESCA.CAediting_498067.ENSG00000081087.OSTM1.png
Soverview
ESCA.CAediting_498068.ENSG00000081087.OSTM1.png
Soverview
GBM.CAediting_498022.ENSG00000081087.OSTM1.png
Soverview
LUAD.CAediting_498067.ENSG00000081087.OSTM1.png
Soverview
PCPG.CAediting_498024.ENSG00000081087.OSTM1.png
Soverview
PCPG.CAediting_498068.ENSG00000081087.OSTM1.png
Soverview
SKCM.CAediting_498024.ENSG00000081087.OSTM1.png
Soverview
SKCM.CAediting_498067.ENSG00000081087.OSTM1.png
Soverview

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Protein coding region RNA A-to-I editings for OSTM1

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.


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The effects of the RNA editing to the miRNA binding sites for OSTM1

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_498009chr6_108042172_-ENSG00000081087.13ENST00000193322hsa-miR-4633-5p1080421661080421738mer-1a108042166108042183151.00-15.91
CAediting_498009chr6_108042172_-ENSG00000081087.13ENST00000193322hsa-miR-6514-3p1080421691080421757mer-m8108042168108042188155.00-17.54
CAediting_498011chr6_108042175_-ENSG00000081087.13ENST00000193322hsa-miR-106a-3p1080421721080421787mer-1a108042172108042193141.00-16.54
CAediting_498011chr6_108042175_-ENSG00000081087.13ENST00000193322hsa-miR-43271080421691080421768mer-1a108042169108042187140.00-13.39
CAediting_498012chr6_108042187_-ENSG00000081087.13ENST00000193322hsa-miR-3189-3p1080421861080421927mer-m8108042185108042204145.00-23.12
CAediting_498012chr6_108042187_-ENSG00000081087.13ENST00000193322hsa-miR-6813-3p1080421851080421917mer-m8108042184108042204140.00-11.59
CAediting_498013chr6_108042188_-ENSG00000081087.13ENST00000193322hsa-miR-3261080421861080421927mer-m8108042185108042204140.00-14.66
CAediting_498013chr6_108042188_-ENSG00000081087.13ENST00000193322hsa-miR-330-5p1080421861080421927mer-m8108042185108042206140.00-20.71
CAediting_498013chr6_108042188_-ENSG00000081087.13ENST00000193322hsa-miR-43141080421871080421937mer-m8108042186108042203140.00-18.91
CAediting_498013chr6_108042188_-ENSG00000081087.13ENST00000193322hsa-miR-514a-5p1080421851080421917mer-m8108042184108042207146.00-18.62
CAediting_498013chr6_108042188_-ENSG00000081087.13ENST00000193322hsa-miR-514a-5p1080421851080421917mer-m8108042184108042207146.00-18.62
CAediting_498013chr6_108042188_-ENSG00000081087.13ENST00000193322hsa-miR-514a-5p1080421851080421917mer-m8108042184108042207146.00-18.62
CAediting_498017chr6_108042214_-ENSG00000081087.13ENST00000193322hsa-miR-121131080422141080422207mer-m8108042213108042234145.00-17.69
CAediting_498017chr6_108042214_-ENSG00000081087.13ENST00000193322hsa-miR-45391080422141080422207mer-m8108042213108042232147.00-15.09
CAediting_498022chr6_108042239_-ENSG00000081087.13ENST00000193322hsa-miR-3187-5p1080422391080422457mer-m8108042238108042261159.00-30.39
CAediting_498022chr6_108042239_-ENSG00000081087.13ENST00000193322hsa-miR-5189-5p1080422391080422457mer-m8108042238108042260152.00-22.49
CAediting_498022chr6_108042239_-ENSG00000081087.13ENST00000193322hsa-miR-6121080422391080422457mer-m8108042238108042261149.00-19.72
CAediting_498022chr6_108042239_-ENSG00000081087.13ENST00000193322hsa-miR-6611080422371080422437mer-m8108042236108042260142.00-20.59
CAediting_498022chr6_108042239_-ENSG00000081087.13ENST00000193322hsa-miR-6849-3p1080422341080422407mer-m8108042233108042253152.00-18.22
CAediting_498022chr6_108042239_-ENSG00000081087.13ENST00000193322hsa-miR-68601080422391080422457mer-m8108042238108042256152.00-24.98
CAediting_498022chr6_108042239_-ENSG00000081087.13ENST00000193322hsa-miR-939-3p1080422381080422447mer-m8108042237108042257140.00-15.63
CAediting_498023chr6_108042240_-ENSG00000081087.13ENST00000193322hsa-miR-4750-5p1080422391080422446mer108042238108042257140.00-27.30
CAediting_498024chr6_108042249_-ENSG00000081087.13ENST00000193322hsa-miR-128-3p1080422471080422537mer-m8108042246108042268169.00-23.98
CAediting_498024chr6_108042249_-ENSG00000081087.13ENST00000193322hsa-miR-128-3p1080422471080422537mer-m8108042246108042268169.00-23.98
CAediting_498024chr6_108042249_-ENSG00000081087.13ENST00000193322hsa-miR-216a-3p1080422471080422537mer-m8108042246108042268150.00-20.14
CAediting_498024chr6_108042249_-ENSG00000081087.13ENST00000193322hsa-miR-3681-3p1080422471080422537mer-m8108042246108042267143.00-15.54
CAediting_498028chr6_108042416_-ENSG00000081087.13ENST00000193322hsa-miR-130a-5p1080424131080424208mer-1a108042413108042434140.00-7.11
CAediting_498028chr6_108042416_-ENSG00000081087.13ENST00000193322hsa-miR-4753-3p1080424121080424198mer-1a108042412108042433152.00-9.10
CAediting_498028chr6_108042416_-ENSG00000081087.13ENST00000193322hsa-miR-6809-3p1080424111080424188mer-1a108042411108042431148.00-6.29
CAediting_498039chr6_108042537_-ENSG00000081087.13ENST00000193322hsa-miR-39431080425331080425397mer-m8108042532108042553145.00-22.14
CAediting_498042chr6_108042554_-ENSG00000081087.13ENST00000193322hsa-miR-140-3p1080425521080425587mer-m8108042551108042571155.00-22.38
CAediting_498045chr6_108042572_-ENSG00000081087.13ENST00000193322hsa-miR-500b-3p1080425721080425787mer-m8108042571108042590145.00-14.86
CAediting_498057chr6_108042615_-ENSG00000081087.13ENST00000193322hsa-miR-4716-5p1080426141080426207mer-m8108042613108042635146.00-14.19
CAediting_498060chr6_108042622_-ENSG00000081087.13ENST00000193322hsa-miR-6501-5p1080426171080426237mer-1a108042617108042638140.00-25.18
CAediting_498060chr6_108042622_-ENSG00000081087.13ENST00000193322hsa-miR-744-3p1080426171080426237mer-m8108042616108042641145.00-14.76
CAediting_498062chr6_108042632_-ENSG00000081087.13ENST00000193322hsa-miR-31761080426281080426347mer-m8108042627108042645158.00-22.23
CAediting_498062chr6_108042632_-ENSG00000081087.13ENST00000193322hsa-miR-3922-3p1080426281080426347mer-m8108042627108042652157.00-23.28
CAediting_498062chr6_108042632_-ENSG00000081087.13ENST00000193322hsa-miR-5580-5p1080426271080426326mer108042626108042649142.00-17.69
CAediting_498062chr6_108042632_-ENSG00000081087.13ENST00000193322hsa-miR-6878-3p1080426291080426357mer-m8108042628108042648140.00-20.04
CAediting_498067chr6_108042685_-ENSG00000081087.13ENST00000193322hsa-miR-6768-5p1080426841080426907mer-m8108042683108042705142.00-20.28
CAediting_498015chr6_108042210_-ENSG00000081087.13ENST00000193322hsa-miR-47511080422051080422117mer-m8108042204108042229145.00-19.71
CAediting_498015chr6_108042210_-ENSG00000081087.13ENST00000193322hsa-miR-6821-3p1080422081080422147mer-m8108042207108042228145.00-14.37
CAediting_498015chr6_108042210_-ENSG00000081087.13ENST00000193322hsa-miR-6861-3p1080422071080422137mer-m8108042206108042223145.00-16.65
CAediting_498016chr6_108042212_-ENSG00000081087.13ENST00000193322hsa-miR-188-5p1080422091080422157mer-m8108042208108042228159.00-20.62
CAediting_498016chr6_108042212_-ENSG00000081087.13ENST00000193322hsa-miR-47801080422101080422178mer-1a108042210108042231146.00-15.44
CAediting_498016chr6_108042212_-ENSG00000081087.13ENST00000193322hsa-miR-6231080422101080422167mer-m8108042209108042235147.00-23.72
CAediting_498016chr6_108042212_-ENSG00000081087.13ENST00000193322hsa-miR-6866-3p1080422091080422157mer-m8108042208108042229149.00-16.34
CAediting_498019chr6_108042220_-ENSG00000081087.13ENST00000193322hsa-miR-6651080422201080422267mer-m8108042219108042238157.00-22.60
CAediting_498019chr6_108042220_-ENSG00000081087.13ENST00000193322hsa-miR-6840-3p1080422191080422257mer-m8108042218108042239151.00-19.22
CAediting_498020chr6_108042227_-ENSG00000081087.13ENST00000193322hsa-miR-28-5p1080422221080422287mer-m8108042221108042243161.00-18.83
CAediting_498020chr6_108042227_-ENSG00000081087.13ENST00000193322hsa-miR-31391080422221080422287mer-m8108042221108042243165.00-22.79
CAediting_498020chr6_108042227_-ENSG00000081087.13ENST00000193322hsa-miR-36701080422241080422307mer-m8108042223108042246146.00-16.99
CAediting_498020chr6_108042227_-ENSG00000081087.13ENST00000193322hsa-miR-36701080422241080422307mer-m8108042223108042246146.00-16.99
CAediting_498020chr6_108042227_-ENSG00000081087.13ENST00000193322hsa-miR-36701080422241080422307mer-m8108042223108042246146.00-16.99
CAediting_498020chr6_108042227_-ENSG00000081087.13ENST00000193322hsa-miR-36701080422241080422307mer-m8108042223108042246146.00-16.99
CAediting_498020chr6_108042227_-ENSG00000081087.13ENST00000193322hsa-miR-708-5p1080422221080422287mer-m8108042221108042242162.00-23.69
CAediting_498021chr6_108042228_-ENSG00000081087.13ENST00000193322hsa-miR-12891080422231080422297mer-m8108042222108042243162.00-24.50
CAediting_498021chr6_108042228_-ENSG00000081087.13ENST00000193322hsa-miR-12891080422231080422297mer-m8108042222108042243162.00-24.50
CAediting_498025chr6_108042262_-ENSG00000081087.13ENST00000193322hsa-miR-6890-3p1080422571080422637mer-m8108042256108042275153.00-15.36
CAediting_498029chr6_108042417_-ENSG00000081087.13ENST00000193322hsa-miR-4659a-3p1080424111080424188mer-1a108042411108042432145.00-9.73
CAediting_498029chr6_108042417_-ENSG00000081087.13ENST00000193322hsa-miR-4659b-3p1080424111080424188mer-1a108042411108042432145.00-9.73
CAediting_498031chr6_108042443_-ENSG00000081087.13ENST00000193322hsa-miR-3922-5p1080424381080424447mer-m8108042437108042462148.00-23.19
CAediting_498031chr6_108042443_-ENSG00000081087.13ENST00000193322hsa-miR-6611080424421080424476mer108042441108042464141.00-24.23
CAediting_498032chr6_108042451_-ENSG00000081087.13ENST00000193322hsa-miR-11811080424511080424577mer-m8108042450108042470140.00-19.31
CAediting_498035chr6_108042476_-ENSG00000081087.13ENST00000193322hsa-miR-891a-3p1080424721080424787mer-m8108042471108042493156.00-18.47
CAediting_498037chr6_108042505_-ENSG00000081087.13ENST00000193322hsa-miR-5587-3p1080425051080425117mer-m8108042504108042524145.00-25.96
CAediting_498037chr6_108042505_-ENSG00000081087.13ENST00000193322hsa-miR-6840-5p1080425041080425107mer-m8108042503108042527167.00-31.98
CAediting_498038chr6_108042513_-ENSG00000081087.13ENST00000193322hsa-miR-3136-3p1080425101080425167mer-m8108042509108042530152.00-17.05
CAediting_498038chr6_108042513_-ENSG00000081087.13ENST00000193322hsa-miR-7155-3p1080425101080425167mer-m8108042509108042527162.00-23.96
CAediting_498040chr6_108042544_-ENSG00000081087.13ENST00000193322hsa-miR-6461080425421080425487mer-m8108042541108042560144.00-20.79
CAediting_498043chr6_108042563_-ENSG00000081087.13ENST00000193322hsa-miR-6804-3p1080425591080425646mer108042558108042580150.00-26.11
CAediting_498044chr6_108042564_-ENSG00000081087.13ENST00000193322hsa-miR-197-3p1080425631080425697mer-m8108042562108042583164.00-29.16
CAediting_498044chr6_108042564_-ENSG00000081087.13ENST00000193322hsa-miR-6511a-3p1080425621080425687mer-m8108042561108042582152.00-20.28
CAediting_498044chr6_108042564_-ENSG00000081087.13ENST00000193322hsa-miR-6511a-3p1080425621080425687mer-m8108042561108042582152.00-20.28
CAediting_498044chr6_108042564_-ENSG00000081087.13ENST00000193322hsa-miR-6511a-3p1080425621080425687mer-m8108042561108042582152.00-20.28
CAediting_498044chr6_108042564_-ENSG00000081087.13ENST00000193322hsa-miR-6511a-3p1080425621080425687mer-m8108042561108042582152.00-20.28
CAediting_498044chr6_108042564_-ENSG00000081087.13ENST00000193322hsa-miR-6511b-3p1080425621080425687mer-m8108042561108042583157.00-23.17
CAediting_498044chr6_108042564_-ENSG00000081087.13ENST00000193322hsa-miR-6511b-3p1080425621080425687mer-m8108042561108042583157.00-23.17
CAediting_498048chr6_108042586_-ENSG00000081087.13ENST00000193322hsa-miR-4742-3p1080425851080425928mer-1a108042585108042604148.00-13.24
CAediting_498051chr6_108042593_-ENSG00000081087.13ENST00000193322hsa-miR-6301080425871080425948mer-1a108042587108042608157.00-17.56
CAediting_498052chr6_108042595_-ENSG00000081087.13ENST00000193322hsa-miR-3158-5p1080425941080426018mer-1a108042594108042614150.00-16.81
CAediting_498052chr6_108042595_-ENSG00000081087.13ENST00000193322hsa-miR-3158-5p1080425941080426018mer-1a108042594108042614150.00-16.81
CAediting_498052chr6_108042595_-ENSG00000081087.13ENST00000193322hsa-miR-544a1080425921080425998mer-1a108042592108042613140.00-11.14
CAediting_498053chr6_108042607_-ENSG00000081087.13ENST00000193322hsa-miR-2277-3p1080426021080426087mer-m8108042601108042621140.00-14.15
CAediting_498053chr6_108042607_-ENSG00000081087.13ENST00000193322hsa-miR-6854-3p1080426061080426127mer-m8108042605108042626147.00-14.06
CAediting_498054chr6_108042609_-ENSG00000081087.13ENST00000193322hsa-miR-39771080426071080426137mer-m8108042606108042627146.00-12.97
CAediting_498054chr6_108042609_-ENSG00000081087.13ENST00000193322hsa-miR-520f-3p1080426051080426117mer-m8108042604108042625150.00-13.29
CAediting_498054chr6_108042609_-ENSG00000081087.13ENST00000193322hsa-miR-6837-3p1080426091080426157mer-m8108042608108042633154.00-20.32
CAediting_498064chr6_108042648_-ENSG00000081087.13ENST00000193322hsa-miR-43231080426451080426517mer-m8108042644108042662141.00-13.12
CAediting_498066chr6_108042661_-ENSG00000081087.13ENST00000193322hsa-miR-5001-3p1080426561080426627mer-m8108042655108042680154.00-22.37
CAediting_498069chr6_108042701_-ENSG00000081087.13ENST00000193322hsa-miR-6774-3p1080427011080427077mer-m8108042700108042720147.00-16.37

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_498019chr6_108042220_-ENSG00000081087.13ENST00000193322hsa-miR-1266-5p1080422191080422246mer108042218108042241142-18.68
CAediting_498050chr6_108042592_-ENSG00000081087.13ENST00000193322hsa-miR-129-5p1080425911080425988mer-1a108042591108042611146-11.6
CAediting_498051chr6_108042593_-ENSG00000081087.13ENST00000193322hsa-miR-129-5p1080425911080425988mer-1a108042591108042611146-11.6
CAediting_498052chr6_108042595_-ENSG00000081087.13ENST00000193322hsa-miR-129-5p1080425911080425988mer-1a108042591108042611146-11.6
CAediting_498050chr6_108042592_-ENSG00000081087.13ENST00000193322hsa-miR-129-5p1080425911080425988mer-1a108042591108042611146-11.6
CAediting_498051chr6_108042593_-ENSG00000081087.13ENST00000193322hsa-miR-129-5p1080425911080425988mer-1a108042591108042611146-11.6
CAediting_498052chr6_108042595_-ENSG00000081087.13ENST00000193322hsa-miR-129-5p1080425911080425988mer-1a108042591108042611146-11.6
CAediting_498034chr6_108042473_-ENSG00000081087.13ENST00000193322hsa-miR-150-3p1080424731080424797mer-m8108042472108042493155-15.61
CAediting_498035chr6_108042476_-ENSG00000081087.13ENST00000193322hsa-miR-150-3p1080424731080424797mer-m8108042472108042493155-15.61
CAediting_498039chr6_108042537_-ENSG00000081087.13ENST00000193322hsa-miR-150-5p1080425361080425427mer-m8108042535108042558142-15.65
CAediting_498036chr6_108042492_-ENSG00000081087.13ENST00000193322hsa-miR-1912-5p1080424881080424947mer-m8108042487108042508145-15.81
CAediting_498041chr6_108042548_-ENSG00000081087.13ENST00000193322hsa-miR-3117-3p1080425481080425547mer-m8108042547108042569145-17.13
CAediting_498061chr6_108042629_-ENSG00000081087.13ENST00000193322hsa-miR-3663-5p1080426281080426347mer-m8108042627108042646141-23.84
CAediting_498062chr6_108042632_-ENSG00000081087.13ENST00000193322hsa-miR-3663-5p1080426281080426347mer-m8108042627108042646141-23.84
CAediting_498065chr6_108042658_-ENSG00000081087.13ENST00000193322hsa-miR-39771080426581080426647mer-m8108042657108042679146-9.83
CAediting_498066chr6_108042661_-ENSG00000081087.13ENST00000193322hsa-miR-39771080426581080426647mer-m8108042657108042679146-9.83
CAediting_498038chr6_108042513_-ENSG00000081087.13ENST00000193322hsa-miR-44371080425091080425157mer-m8108042508108042528153-21.93
CAediting_498022chr6_108042239_-ENSG00000081087.13ENST00000193322hsa-miR-44531080422361080422427mer-m8108042235108042256149-15.28
CAediting_498023chr6_108042240_-ENSG00000081087.13ENST00000193322hsa-miR-44531080422361080422427mer-m8108042235108042256149-15.28
CAediting_498022chr6_108042239_-ENSG00000081087.13ENST00000193322hsa-miR-45381080422361080422427mer-m8108042235108042256149-14.25
CAediting_498023chr6_108042240_-ENSG00000081087.13ENST00000193322hsa-miR-45381080422361080422427mer-m8108042235108042256149-14.25
CAediting_498020chr6_108042227_-ENSG00000081087.13ENST00000193322hsa-miR-4653-3p1080422231080422286mer108042222108042245143-25.38
CAediting_498021chr6_108042228_-ENSG00000081087.13ENST00000193322hsa-miR-4653-3p1080422231080422286mer108042222108042245143-25.38
CAediting_498025chr6_108042262_-ENSG00000081087.13ENST00000193322hsa-miR-4684-5p1080422621080422687mer-m8108042261108042282144-8.1
CAediting_498026chr6_108042264_-ENSG00000081087.13ENST00000193322hsa-miR-4684-5p1080422621080422687mer-m8108042261108042282144-8.1
CAediting_498027chr6_108042266_-ENSG00000081087.13ENST00000193322hsa-miR-4684-5p1080422621080422687mer-m8108042261108042282144-8.1
CAediting_498046chr6_108042580_-ENSG00000081087.13ENST00000193322hsa-miR-4735-5p1080425791080425857mer-m8108042578108042599140-4.28
CAediting_498047chr6_108042583_-ENSG00000081087.13ENST00000193322hsa-miR-4735-5p1080425791080425857mer-m8108042578108042599140-4.28
CAediting_498042chr6_108042554_-ENSG00000081087.13ENST00000193322hsa-miR-47591080425481080425558mer-1a108042548108042568145-13.2
CAediting_498019chr6_108042220_-ENSG00000081087.13ENST00000193322hsa-miR-510-5p1080422181080422247mer-m8108042217108042238150-19.76
CAediting_498062chr6_108042632_-ENSG00000081087.13ENST00000193322hsa-miR-516a-5p1080426321080426376mer108042631108042653140-14.09
CAediting_498062chr6_108042632_-ENSG00000081087.13ENST00000193322hsa-miR-516a-5p1080426321080426376mer108042631108042653140-14.09
CAediting_498026chr6_108042264_-ENSG00000081087.13ENST00000193322hsa-miR-519a-2-5p1080422621080422698mer-1a108042262108042282154-14.62
CAediting_498027chr6_108042266_-ENSG00000081087.13ENST00000193322hsa-miR-519a-2-5p1080422621080422698mer-1a108042262108042282154-14.62
CAediting_498026chr6_108042264_-ENSG00000081087.13ENST00000193322hsa-miR-520b-5p1080422621080422698mer-1a108042262108042282154-14.62
CAediting_498027chr6_108042266_-ENSG00000081087.13ENST00000193322hsa-miR-520b-5p1080422621080422698mer-1a108042262108042282154-14.62
CAediting_498040chr6_108042544_-ENSG00000081087.13ENST00000193322hsa-miR-5621080425411080425477mer-m8108042540108042560151-12.63
CAediting_498040chr6_108042544_-ENSG00000081087.13ENST00000193322hsa-miR-56971080425401080425467mer-m8108042539108042558148-14.12
CAediting_498061chr6_108042629_-ENSG00000081087.13ENST00000193322hsa-miR-61311080426271080426337mer-m8108042626108042644140-18.36
CAediting_498062chr6_108042632_-ENSG00000081087.13ENST00000193322hsa-miR-61311080426271080426337mer-m8108042626108042644140-18.36
CAediting_498025chr6_108042262_-ENSG00000081087.13ENST00000193322hsa-miR-6760-3p1080422571080422637mer-m8108042256108042276142-12.74
CAediting_498039chr6_108042537_-ENSG00000081087.13ENST00000193322hsa-miR-6778-3p1080425341080425407mer-m8108042533108042553140-14.56
CAediting_498025chr6_108042262_-ENSG00000081087.13ENST00000193322hsa-miR-6818-3p1080422601080422667mer-m8108042259108042280140-11.1
CAediting_498026chr6_108042264_-ENSG00000081087.13ENST00000193322hsa-miR-6818-3p1080422601080422667mer-m8108042259108042280140-11.1
CAediting_498061chr6_108042629_-ENSG00000081087.13ENST00000193322hsa-miR-6843-3p1080426291080426357mer-m8108042628108042648146-16.38
CAediting_498062chr6_108042632_-ENSG00000081087.13ENST00000193322hsa-miR-6843-3p1080426291080426357mer-m8108042628108042648146-16.38
CAediting_498061chr6_108042629_-ENSG00000081087.13ENST00000193322hsa-miR-6848-3p1080426291080426357mer-m8108042628108042646140-11.86
CAediting_498062chr6_108042632_-ENSG00000081087.13ENST00000193322hsa-miR-6848-3p1080426291080426357mer-m8108042628108042646140-11.86
CAediting_498014chr6_108042197_-ENSG00000081087.13ENST00000193322hsa-miR-6884-5p1080421921080421976mer108042191108042214143-21.9
CAediting_498042chr6_108042554_-ENSG00000081087.13ENST00000193322hsa-miR-7151-3p1080425541080425607mer-m8108042553108042573140-14.57
CAediting_498032chr6_108042451_-ENSG00000081087.13ENST00000193322hsa-miR-7601080424451080424528mer-1a108042445108042467144-21.52
CAediting_498064chr6_108042648_-ENSG00000081087.13ENST00000193322hsa-miR-766-3p1080426471080426537mer-m8108042646108042672149-24.6
CAediting_498013chr6_108042188_-ENSG00000081087.13ENST00000193322hsa-miR-887-5p1080421871080421948mer-1a108042187108042207142-13.51
CAediting_498069chr6_108042701_-ENSG00000081087.13ENST00000193322hsa-miR-892a1080426991080427057mer-m8108042698108042718150-23.84
CAediting_498024chr6_108042249_-ENSG00000081087.13ENST00000193322hsa-miR-9211080422491080422557mer-m8108042248108042272150-14.04
CAediting_498033chr6_108042463_-ENSG00000081087.13ENST00000193322hsa-miR-92a-1-5p1080424601080424656mer108042459108042484154-25.36
CAediting_498043chr6_108042563_-ENSG00000081087.13ENST00000193322hsa-miR-98981080425611080425677mer-m8108042560108042578152-21
CAediting_498044chr6_108042564_-ENSG00000081087.13ENST00000193322hsa-miR-98981080425611080425677mer-m8108042560108042578152-21

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_846604chr11_93733708_-ENSG00000081087.13ENST00000193322hsa-miR-1304-3p1080438571080438637mer-m8108043856108043876157-19.57
CAediting_1229413chr17_67471544_+ENSG00000081087.13ENST00000193322hsa-miR-548aa1080447211080447288mer-1a108044721108044745156-17.78
CAediting_1229413chr17_67471544_+ENSG00000081087.13ENST00000193322hsa-miR-548aa1080441641080441707mer-m8108044163108044185147-13.16
CAediting_1229414chr17_67471546_+ENSG00000081087.13ENST00000193322hsa-miR-548aa1080422301080422367mer-m8108042229108042253140-13.26
CAediting_117844chr1_162342605_+ENSG00000081087.13ENST00000193322hsa-miR-556-3p1080440641080440707mer-m8108044063108044084145-10.23
CAediting_414656chr5_72878640_+ENSG00000081087.13ENST00000193322hsa-miR-4804-3p1080446871080446937mer-m8108044686108044705148-14.49

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_573001chr7_92204086_-ENSG00000081087.13ENST00000193322hsa-miR-1285-5p1080437551080437617mer-m8108043754108043774155-16.05
CAediting_393chr1_1167164_+ENSG00000081087.13ENST00000193322hsa-miR-200b-3p1080431121080431198mer-1a108043112108043133147-12.57
CAediting_393chr1_1167164_+ENSG00000081087.13ENST00000193322hsa-miR-200b-3p1080443341080443418mer-1a108044334108044360149-16.52
CAediting_1351755chr19_40282625_-ENSG00000081087.13ENST00000193322hsa-miR-6411080425151080425217mer-m8108042514108042537140-12.79

check button Differentially expressed gene-miRNA network

Top

The effects of the RNA editing to the stability of the RNA structures for OSTM1

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.
ENST00000193322.6protein_codingSoverviewSoverview
ENST00000492130.1processed_transcriptSoverviewSoverview

check button RNA A-to-I editing in RNA structures for Minimum free energy (MFE).
CAeditom_IDENSTEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI
CAediting_498009ENST00000193322.6chr6_108042172_--1253.87-1248.27-1278.10
CAediting_498010ENST00000193322.6chr6_108042173_--1247.67-1248.27-1278.10
CAediting_498011ENST00000193322.6chr6_108042175_--1248.47-1248.27-1278.10
CAediting_498012ENST00000193322.6chr6_108042187_--1247.97-1248.27-1278.10
CAediting_498013ENST00000193322.6chr6_108042188_--1248.37-1248.27-1278.10
CAediting_498014ENST00000193322.6chr6_108042197_--1246.97-1248.27-1278.10
CAediting_498015ENST00000193322.6chr6_108042210_--1247.67-1248.27-1278.10
CAediting_498016ENST00000193322.6chr6_108042212_--1250.37-1248.27-1278.10
CAediting_498017ENST00000193322.6chr6_108042214_--1248.27-1248.27-1278.10
CAediting_498018ENST00000193322.6chr6_108042215_--1250.87-1248.27-1278.10
CAediting_498019ENST00000193322.6chr6_108042220_--1247.47-1248.27-1278.10
CAediting_498020ENST00000193322.6chr6_108042227_--1248.27-1248.27-1278.10
CAediting_498021ENST00000193322.6chr6_108042228_--1247.77-1248.27-1278.10
CAediting_498022ENST00000193322.6chr6_108042239_--1254.87-1248.27-1278.10
CAediting_498023ENST00000193322.6chr6_108042240_--1247.57-1248.27-1278.10
CAediting_498024ENST00000193322.6chr6_108042249_--1248.27-1248.27-1278.10
CAediting_498025ENST00000193322.6chr6_108042262_--1247.67-1248.27-1278.10
CAediting_498026ENST00000193322.6chr6_108042264_--1247.37-1248.27-1278.10
CAediting_498027ENST00000193322.6chr6_108042266_--1246.97-1248.27-1278.10
CAediting_498028ENST00000193322.6chr6_108042416_--1248.37-1248.27-1278.10
CAediting_498029ENST00000193322.6chr6_108042417_--1248.67-1248.27-1278.10
CAediting_498030ENST00000193322.6chr6_108042427_--1248.37-1248.27-1278.10
CAediting_498031ENST00000193322.6chr6_108042443_--1247.47-1248.27-1278.10
CAediting_498032ENST00000193322.6chr6_108042451_--1248.27-1248.27-1278.10
CAediting_498033ENST00000193322.6chr6_108042463_--1249.57-1248.27-1278.10
CAediting_498034ENST00000193322.6chr6_108042473_--1248.37-1248.27-1278.10
CAediting_498035ENST00000193322.6chr6_108042476_--1252.07-1248.27-1278.10
CAediting_498036ENST00000193322.6chr6_108042492_--1247.97-1248.27-1278.10
CAediting_498037ENST00000193322.6chr6_108042505_--1250.97-1248.27-1278.10
CAediting_498038ENST00000193322.6chr6_108042513_--1248.27-1248.27-1278.10
CAediting_498039ENST00000193322.6chr6_108042537_--1248.27-1248.27-1278.10
CAediting_498040ENST00000193322.6chr6_108042544_--1249.37-1248.27-1278.10
CAediting_498041ENST00000193322.6chr6_108042548_--1246.97-1248.27-1278.10
CAediting_498042ENST00000193322.6chr6_108042554_--1247.17-1248.27-1278.10
CAediting_498043ENST00000193322.6chr6_108042563_--1248.27-1248.27-1278.10
CAediting_498044ENST00000193322.6chr6_108042564_--1248.27-1248.27-1278.10
CAediting_498045ENST00000193322.6chr6_108042572_--1247.47-1248.27-1278.10
CAediting_498046ENST00000193322.6chr6_108042580_--1247.97-1248.27-1278.10
CAediting_498047ENST00000193322.6chr6_108042583_--1250.57-1248.27-1278.10
CAediting_498048ENST00000193322.6chr6_108042586_--1248.27-1248.27-1278.10
CAediting_498049ENST00000193322.6chr6_108042589_--1249.27-1248.27-1278.10
CAediting_498050ENST00000193322.6chr6_108042592_--1248.17-1248.27-1278.10
CAediting_498051ENST00000193322.6chr6_108042593_--1248.37-1248.27-1278.10
CAediting_498052ENST00000193322.6chr6_108042595_--1248.37-1248.27-1278.10
CAediting_498053ENST00000193322.6chr6_108042607_--1247.87-1248.27-1278.10
CAediting_498054ENST00000193322.6chr6_108042609_--1248.57-1248.27-1278.10
CAediting_498055ENST00000193322.6chr6_108042610_--1254.67-1248.27-1278.10
CAediting_498056ENST00000193322.6chr6_108042611_--1247.37-1248.27-1278.10
CAediting_498057ENST00000193322.6chr6_108042615_--1247.97-1248.27-1278.10
CAediting_498058ENST00000193322.6chr6_108042617_--1247.87-1248.27-1278.10
CAediting_498059ENST00000193322.6chr6_108042619_--1248.27-1248.27-1278.10
CAediting_498060ENST00000193322.6chr6_108042622_--1255.47-1248.27-1278.10
CAediting_498061ENST00000193322.6chr6_108042629_--1247.57-1248.27-1278.10
CAediting_498062ENST00000193322.6chr6_108042632_--1247.67-1248.27-1278.10
CAediting_498063ENST00000193322.6chr6_108042640_--1247.37-1248.27-1278.10
CAediting_498064ENST00000193322.6chr6_108042648_--1247.27-1248.27-1278.10
CAediting_498065ENST00000193322.6chr6_108042658_--1249.97-1248.27-1278.10
CAediting_498066ENST00000193322.6chr6_108042661_--1254.87-1248.27-1278.10
CAediting_498067ENST00000193322.6chr6_108042685_--1248.47-1248.27-1278.10
CAediting_498068ENST00000193322.6chr6_108042693_--1248.27-1248.27-1278.10
CAediting_498069ENST00000193322.6chr6_108042701_--1250.77-1248.27-1278.10
CAediting_498009ENST00000492130.1chr6_108042172_--634.27-629.10-658.57
CAediting_498010ENST00000492130.1chr6_108042173_--628.70-629.10-658.57
CAediting_498011ENST00000492130.1chr6_108042175_--629.10-629.10-658.57
CAediting_498012ENST00000492130.1chr6_108042187_--628.80-629.10-658.57
CAediting_498013ENST00000492130.1chr6_108042188_--629.20-629.10-658.57
CAediting_498014ENST00000492130.1chr6_108042197_--627.80-629.10-658.57
CAediting_498015ENST00000492130.1chr6_108042210_--628.50-629.10-658.57
CAediting_498016ENST00000492130.1chr6_108042212_--631.20-629.10-658.57
CAediting_498017ENST00000492130.1chr6_108042214_--629.10-629.10-658.57
CAediting_498018ENST00000492130.1chr6_108042215_--631.70-629.10-658.57
CAediting_498019ENST00000492130.1chr6_108042220_--628.30-629.10-658.57
CAediting_498020ENST00000492130.1chr6_108042227_--629.10-629.10-658.57
CAediting_498021ENST00000492130.1chr6_108042228_--628.60-629.10-658.57
CAediting_498022ENST00000492130.1chr6_108042239_--635.70-629.10-658.57
CAediting_498023ENST00000492130.1chr6_108042240_--628.40-629.10-658.57
CAediting_498024ENST00000492130.1chr6_108042249_--629.10-629.10-658.57
CAediting_498025ENST00000492130.1chr6_108042262_--628.50-629.10-658.57
CAediting_498026ENST00000492130.1chr6_108042264_--628.20-629.10-658.57
CAediting_498045ENST00000492130.1chr6_108042572_--629.20-629.10-658.57
CAediting_498046ENST00000492130.1chr6_108042580_--629.90-629.10-658.57
CAediting_498047ENST00000492130.1chr6_108042583_--630.40-629.10-658.57
CAediting_498048ENST00000492130.1chr6_108042586_--631.90-629.10-658.57
CAediting_498049ENST00000492130.1chr6_108042589_--632.60-629.10-658.57
CAediting_498050ENST00000492130.1chr6_108042592_--629.10-629.10-658.57
CAediting_498051ENST00000492130.1chr6_108042593_--630.50-629.10-658.57
CAediting_498052ENST00000492130.1chr6_108042595_--631.70-629.10-658.57
CAediting_498053ENST00000492130.1chr6_108042607_--628.70-629.10-658.57
CAediting_498054ENST00000492130.1chr6_108042609_--629.40-629.10-658.57
CAediting_498055ENST00000492130.1chr6_108042610_--635.50-629.10-658.57
CAediting_498056ENST00000492130.1chr6_108042611_--628.20-629.10-658.57
CAediting_498057ENST00000492130.1chr6_108042615_--628.80-629.10-658.57
CAediting_498058ENST00000492130.1chr6_108042617_--628.70-629.10-658.57
CAediting_498059ENST00000492130.1chr6_108042619_--629.10-629.10-658.57
CAediting_498060ENST00000492130.1chr6_108042622_--636.30-629.10-658.57
CAediting_498061ENST00000492130.1chr6_108042629_--628.40-629.10-658.57
CAediting_498062ENST00000492130.1chr6_108042632_--628.50-629.10-658.57
CAediting_498063ENST00000492130.1chr6_108042640_--628.20-629.10-658.57
CAediting_498064ENST00000492130.1chr6_108042648_--628.10-629.10-658.57
CAediting_498065ENST00000492130.1chr6_108042658_--630.80-629.10-658.57
CAediting_498066ENST00000492130.1chr6_108042661_--635.70-629.10-658.57
CAediting_498067ENST00000492130.1chr6_108042685_--628.80-629.10-658.57
CAediting_498068ENST00000492130.1chr6_108042693_--628.70-629.10-658.57
CAediting_498069ENST00000492130.1chr6_108042701_--631.17-629.10-658.57

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Relation with ADAR for OSTM1

check button Correlation between ADAR gene expression and RNA editing frequency
CancerCAeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)
BRCACAediting_498009chr6_108042172_-0.0007021196921965980.150907248166839....
LIHCCAediting_498009chr6_108042172_-0.04390227443971830.265594307799966....
LUADCAediting_498009chr6_108042172_-0.006112041910316070.213254223963647....
LUSCCAediting_498009chr6_108042172_-0.0002384191307412760.256423820036495....
GBMCAediting_498009chr6_108042172_-0.0001443624380516680.332223926544744....
STADCAediting_498009chr6_108042172_-..0.01314654941457260.246004413765592..
PCPGCAediting_498009chr6_108042172_-1.10030816521602e-060.3832054004370430.008029795909706970.214275025056169..
SKCMCAediting_498009chr6_108042172_-1.04619288657939e-070.29239456713705....
SARCCAediting_498009chr6_108042172_-4.24702279984937e-060.449914653751514....
PCPGCAediting_498017chr6_108042214_-0.03515828358681520.213075481143673....
BRCACAediting_498022chr6_108042239_-2.50590963388803e-080.342108266146869....
LUSCCAediting_498022chr6_108042239_-0.03382404013232650.175172754819072....
PRADCAediting_498022chr6_108042239_-0.0003608187697137640.445523065803182....
HNSCCAediting_498022chr6_108042239_-0.01790476206692370.245065005072480.01764614030720470.245604634188888..
THCACAediting_498022chr6_108042239_-0.0230959282981640.288237203298324....
KIRCCAediting_498022chr6_108042239_-0.01118563140423880.146775649851399....
ESCACAediting_498022chr6_108042239_-..0.04187179843591910.255151104227539..
PCPGCAediting_498022chr6_108042239_-0.001095751940971720.3006451716655490.01758527492616030.221067133291444..
SKCMCAediting_498022chr6_108042239_-1.07058869226353e-070.293060570779116....
UVMCAediting_498022chr6_108042239_-0.004843762285524070.359044608256776....
BRCACAediting_498024chr6_108042249_-0.00355490584405130.194874516656247....
THCACAediting_498024chr6_108042249_-0.000506240296472470.3919296535826010.02619142043951140.25672430628213..
KIRPCAediting_498024chr6_108042249_-0.04878197844152560.277360231902118....
PCPGCAediting_498024chr6_108042249_-0.001641961021357230.3050157857161450.01985338487119860.228124700752685..
SKCMCAediting_498024chr6_108042249_-7.340431572055e-080.28480156136887....
BRCACAediting_498039chr6_108042537_-....0.03714937973280840.159524502033621
GBMCAediting_498039chr6_108042537_-0.01170339013185410.331744490402151....
HNSCCAediting_498039chr6_108042537_-0.02127318440221410.218426618107202....
SKCMCAediting_498039chr6_108042537_-1.13961445964106e-050.299117022623676....
BRCACAediting_498042chr6_108042554_-0.0008017568024833160.234599713964993....
GBMCAediting_498042chr6_108042554_-0.04432062847323050.262816759054323....
HNSCCAediting_498042chr6_108042554_-9.57819647736445e-050.458407422966472....
PCPGCAediting_498042chr6_108042554_-0.01492226644792120.280136477313308....
SKCMCAediting_498042chr6_108042554_-6.35472464586545e-060.344297513951836....
BRCACAediting_498045chr6_108042572_-....0.03100048092879290.231459309735436
LGGCAediting_498057chr6_108042615_-0.0004783360101108230.447776936499817....
BRCACAediting_498057chr6_108042615_-0.000382754165565530.225594501924463....
LIHCCAediting_498057chr6_108042615_-0.003706905131047450.36046807297614....
LUSCCAediting_498057chr6_108042615_-0.006453270935148710.273391941200731....
HNSCCAediting_498057chr6_108042615_-0.008866376777810310.230464883149943....
KIRCCAediting_498057chr6_108042615_-0.0002592997040705920.237662716228664....
PCPGCAediting_498057chr6_108042615_-0.002302647841952520.290340128744785....
SKCMCAediting_498057chr6_108042615_-3.17825180805616e-080.428894257320495....
BLCACAediting_498067chr6_108042685_-2.24515046904589e-060.375141691944326....
LGGCAediting_498067chr6_108042685_-0.0001273473245658620.214895308068655....
BRCACAediting_498067chr6_108042685_-2.82334883481383e-100.232115715011976....
LIHCCAediting_498067chr6_108042685_-1.76051848980235e-060.397907494012038....
CESCCAediting_498067chr6_108042685_-0.01030503293043250.206181315947291....
LUADCAediting_498067chr6_108042685_-0.00415347185453880.16755511076525....
LUSCCAediting_498067chr6_108042685_-0.003071435168525740.155836850180218....
GBMCAediting_498067chr6_108042685_-0.004717000685311750.237521426018594....
PRADCAediting_498067chr6_108042685_-0.003610108112965950.171865700726996....
HNSCCAediting_498067chr6_108042685_-4.34209478410877e-110.349515715066510.01051486229779220.139410636341073..
THCACAediting_498067chr6_108042685_-0.04013410272857050.12362470798332....
KIRCCAediting_498067chr6_108042685_-2.24087540960703e-050.190829140683387....
ESCACAediting_498067chr6_108042685_-..0.01047024403057790.230062511568314..
PCPGCAediting_498067chr6_108042685_-6.29358132865133e-090.4318096555865690.01956522450387170.181066599338694..
SKCMCAediting_498067chr6_108042685_-9.13712089391239e-250.470705626608445....
UVMCAediting_498067chr6_108042685_-0.003488262427724580.339888508079624....
TGCTCAediting_498067chr6_108042685_-0.01990461432504480.295062939698614....
LGGCAediting_498068chr6_108042693_-4.33201118786237e-090.447159106874612....
BRCACAediting_498068chr6_108042693_-1.45056823342462e-060.218052055925261....
LUADCAediting_498068chr6_108042693_-0.002194463794130460.20779222613987....
LUSCCAediting_498068chr6_108042693_-0.002943320260923360.19566856898893....
GBMCAediting_498068chr6_108042693_-0.00245720725210480.29817809192459....
HNSCCAediting_498068chr6_108042693_-0.009632088781832440.162475957369633....
STADCAediting_498068chr6_108042693_-..0.03587125622897180.185678095300652..
KIRCCAediting_498068chr6_108042693_-7.45828674944497e-070.235971833585557....
PCPGCAediting_498068chr6_108042693_-1.31492240137559e-050.355542787913105....
SKCMCAediting_498068chr6_108042693_-3.57696444139521e-170.444515358851026....
SARCCAediting_498068chr6_108042693_-0.03826546369268250.187083260013494....

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Relation with cancer stages for OSTM1

check button Correlation between Cancer stages and RNA editing frequency
CancerStage_typeCAeditomIDpositionP-valCoeff.
BRCApathologic_stageCAediting_498022chr6_108042239_-0.002692632184475360.192094241038992
CESCclinical_stageCAediting_498009chr6_108042172_-0.042088668007121-0.258993729543098
ESCApathologic_stageCAediting_498024chr6_108042249_-0.01628660532882110.31425806654736
HNSCclinical_stageCAediting_498024chr6_108042249_-0.04108282774500530.18448303720935
HNSCpathologic_stageCAediting_498009chr6_108042172_-0.008642028983400290.213004611561113
KIRCpathologic_stageCAediting_498009chr6_108042172_-0.04805772551379180.101349584388719
KIRPpathologic_stageCAediting_498024chr6_108042249_-0.02212069081350680.329682663514257
LUADpathologic_stageCAediting_498067chr6_108042685_-0.00897954926734450.15479016077425
LUADpathologic_stageCAediting_498068chr6_108042693_-0.01790410158169670.163256394667047

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Relation with survival for OSTM1

check button Correlation between RNA editing and survival
CancerCAeditomIDpositionKMpvalueCoxpvalueCoxHR
KIRCCAediting_498057chr6_108042615_-0.04772283893029330.019217646.4039

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RelatedDrugs for OSTM1

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for OSTM1

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease name# pubmedsSource
OSTM1C1838258Osteopetrosis and infantile neuroaxonal dystrophy1ORPHANET