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Editing gene: STON1-GTF2A1L (CAeditome ID:286749)

Gene summary for STON1-GTF2A1L

Gene summary

Gene information	Gene symbol	STON1-GTF2A1L
	Gene ID	286749
	Gene name	STON1-GTF2A1L readthrough
	Synonyms	ALF\|GTF2A1L\|GTF2A1LF\|SALF
	Cytomap	2p16.3
	Type of gene	protein-coding
	Description	STON1-GTF2A1L proteinGeneral transcription factor II A, 1-like factorTFIIA-alpha and beta-like factorstoned B/TFIIA-alpha/beta-like factor
	Modification date	20210518
	UniProtAcc	.
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene

GO ID

GO term

PubMed ID

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RNA A-to-I events for STON1-GTF2A1L

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000068781.19

RNA A-to-I editing events in Cancer.

CAediting_179256(48532090, +), CAediting_179257(48532123, +), CAediting_179258(48533004, +), CAediting_179259(48533016, +), CAediting_179260(48533071, +), CAediting_179261(48533129, +), CAediting_179262(48533134, +), CAediting_179263(48533159, +), CAediting_179264(48533217, +), CAediting_179265(48533221, +), CAediting_179266(48533222, +), CAediting_179267(48533297, +), CAediting_179268(48533434, +), CAediting_179269(48533474, +), CAediting_179270(48533479, +), CAediting_179271(48533482, +), CAediting_179272(48533490, +), CAediting_179273(48533503, +), CAediting_179274(48533513, +), CAediting_179275(48533540, +), CAediting_179276(48533543, +), CAediting_179277(48533569, +), CAediting_179278(48533570, +), CAediting_179279(48533826, +), CAediting_179280(48533969, +), CAediting_179281(48534003, +), CAediting_179282(48534015, +), CAediting_179283(48534676, +), CAediting_179284(48534698, +), CAediting_179285(48536341, +), CAediting_179286(48536427, +), CAediting_179287(48537593, +), CAediting_179288(48537594, +), CAediting_179289(48537647, +), CAediting_179290(48537648, +), CAediting_179291(48537662, +), CAediting_179292(48537663, +), CAediting_179293(48537665, +), CAediting_179294(48537671, +), CAediting_179295(48537672, +), CAediting_179296(48537687, +), CAediting_179297(48537688, +), CAediting_179298(48537691, +), CAediting_179299(48537699, +), CAediting_179300(48537700, +), CAediting_179301(48537703, +), CAediting_179302(48537729, +), CAediting_179303(48537730, +), CAediting_179304(48537735, +), CAediting_179305(48537739, +), CAediting_179306(48537752, +), CAediting_179307(48537760, +), CAediting_179308(48537761, +), CAediting_179309(48537762, +), CAediting_179310(48537765, +), CAediting_179311(48537770, +), CAediting_179312(48537771, +), CAediting_179313(48538002, +), CAediting_179314(48538053, +), CAediting_179315(48538054, +), CAediting_179316(48538057, +), CAediting_179317(48538071, +), CAediting_179318(48538083, +), CAediting_179319(48538093, +), CAediting_179320(48538123, +), CAediting_179321(48538139, +), CAediting_179322(48538142, +), CAediting_179323(48538151, +), CAediting_179324(48538164, +), CAediting_179325(48538168, +), CAediting_179326(48538219, +), CAediting_179327(48538231, +), CAediting_179328(48539601, +), CAediting_179329(48539602, +), CAediting_179330(48539619, +), CAediting_179331(48541186, +), CAediting_179332(48541191, +), CAediting_179333(48541228, +), CAediting_179334(48541230, +), CAediting_179335(48541231, +), CAediting_179336(48541475, +), CAediting_179337(48541484, +), CAediting_179338(48541578, +), CAediting_179339(48541611, +), CAediting_179340(48541614, +), CAediting_179341(48541638, +), CAediting_179342(48543717, +), CAediting_179343(48543784, +), CAediting_179344(48546747, +), CAediting_179345(48546786, +), CAediting_179346(48546804, +), CAediting_179347(48546828, +), CAediting_179348(48548542, +), CAediting_179349(48548573, +), CAediting_179350(48549709, +), CAediting_179351(48549714, +), CAediting_179352(48549718, +), CAediting_179353(48549733, +), CAediting_179354(48549737, +), CAediting_179355(48549757, +), CAediting_179356(48549758, +), CAediting_179357(48549763, +), CAediting_179358(48565194, +), CAediting_179359(48565237, +), CAediting_179360(48565251, +), CAediting_179361(48565259, +), CAediting_179362(48565263, +), CAediting_179363(48587476, +), CAediting_179364(48592496, +), CAediting_179365(48596870, +), CAediting_179366(48596874, +), CAediting_179367(48596882, +), CAediting_179368(48596894, +), CAediting_179369(48596914, +), CAediting_179370(48596978, +), CAediting_179371(48596988, +), CAediting_179372(48596990, +), CAediting_179373(48597001, +), CAediting_179374(48597014, +), CAediting_179375(48597053, +), CAediting_179376(48597067, +), CAediting_179377(48597096, +), CAediting_179378(48597127, +), CAediting_179379(48598761, +), CAediting_179380(48598787, +), CAediting_179381(48598795, +), CAediting_179382(48598796, +), CAediting_179383(48598812, +), CAediting_179384(48598819, +), CAediting_179385(48598839, +), CAediting_179386(48598842, +), CAediting_179387(48598847, +), CAediting_179388(48598848, +), CAediting_179389(48598862, +), CAediting_179390(48598863, +), CAediting_179391(48598865, +), CAediting_179392(48598871, +), CAediting_179393(48598872, +), CAediting_179394(48598873, +), CAediting_179395(48598925, +), CAediting_179396(48598957, +), CAediting_179397(48598961, +), CAediting_179398(48598978, +), CAediting_179399(48598984, +), CAediting_179400(48598992, +), CAediting_179401(48598993, +), CAediting_179402(48599013, +), CAediting_179403(48599022, +), CAediting_179404(48599024, +), CAediting_179405(48599032, +), CAediting_179406(48599098, +), CAediting_179407(48603967, +), CAediting_179408(48603988, +), CAediting_179409(48604000, +), CAediting_179410(48604014, +), CAediting_179411(48604024, +), CAediting_179412(48604031, +), CAediting_179413(48604038, +), CAediting_179414(48604044, +), CAediting_179415(48604062, +), CAediting_179416(48604071, +), CAediting_179417(48604081, +), CAediting_179418(48604084, +), CAediting_179419(48604086, +), CAediting_179420(48604097, +), CAediting_179421(48604100, +), CAediting_179422(48604119, +), CAediting_179423(48604125, +), CAediting_179424(48604128, +), CAediting_179425(48604142, +), CAediting_179426(48604145, +), CAediting_179427(48604168, +), CAediting_179428(48604175, +), CAediting_179429(48604185, +), CAediting_179430(48604189, +), CAediting_179431(48604193, +), CAediting_179432(48604206, +), CAediting_179433(48604208, +), CAediting_179434(48604220, +), CAediting_179435(48604222, +), CAediting_179436(48604226, +),

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RNA editing positional annotations for STON1-GTF2A1L using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_179256	chr2_48532090_+	intronic
CAediting_179257	chr2_48532123_+	intronic
CAediting_179258	chr2_48533004_+	intronic
CAediting_179259	chr2_48533016_+	intronic
CAediting_179260	chr2_48533071_+	intronic
CAediting_179261	chr2_48533129_+	intronic
CAediting_179262	chr2_48533134_+	intronic
CAediting_179263	chr2_48533159_+	intronic
CAediting_179264	chr2_48533217_+	intronic
CAediting_179265	chr2_48533221_+	intronic
CAediting_179266	chr2_48533222_+	intronic
CAediting_179267	chr2_48533297_+	intronic
CAediting_179268	chr2_48533434_+	intronic
CAediting_179269	chr2_48533474_+	intronic
CAediting_179270	chr2_48533479_+	intronic
CAediting_179271	chr2_48533482_+	intronic
CAediting_179272	chr2_48533490_+	intronic
CAediting_179273	chr2_48533503_+	intronic
CAediting_179274	chr2_48533513_+	intronic
CAediting_179275	chr2_48533540_+	intronic
CAediting_179276	chr2_48533543_+	intronic
CAediting_179277	chr2_48533569_+	intronic
CAediting_179278	chr2_48533570_+	intronic
CAediting_179279	chr2_48533826_+	intronic
CAediting_179280	chr2_48533969_+	intronic
CAediting_179281	chr2_48534003_+	intronic
CAediting_179282	chr2_48534015_+	intronic
CAediting_179283	chr2_48534676_+	intronic
CAediting_179284	chr2_48534698_+	intronic
CAediting_179285	chr2_48536341_+	intronic
CAediting_179286	chr2_48536427_+	intronic
CAediting_179287	chr2_48537593_+	intronic
CAediting_179288	chr2_48537594_+	intronic
CAediting_179289	chr2_48537647_+	intronic
CAediting_179290	chr2_48537648_+	intronic
CAediting_179291	chr2_48537662_+	intronic
CAediting_179292	chr2_48537663_+	intronic
CAediting_179293	chr2_48537665_+	intronic
CAediting_179294	chr2_48537671_+	intronic
CAediting_179295	chr2_48537672_+	intronic
CAediting_179296	chr2_48537687_+	intronic
CAediting_179297	chr2_48537688_+	intronic
CAediting_179298	chr2_48537691_+	intronic
CAediting_179299	chr2_48537699_+	intronic
CAediting_179300	chr2_48537700_+	intronic
CAediting_179301	chr2_48537703_+	intronic
CAediting_179302	chr2_48537729_+	intronic
CAediting_179303	chr2_48537730_+	intronic
CAediting_179304	chr2_48537735_+	intronic
CAediting_179305	chr2_48537739_+	intronic
CAediting_179306	chr2_48537752_+	intronic
CAediting_179307	chr2_48537760_+	intronic
CAediting_179308	chr2_48537761_+	intronic
CAediting_179309	chr2_48537762_+	intronic
CAediting_179310	chr2_48537765_+	intronic
CAediting_179311	chr2_48537770_+	intronic
CAediting_179312	chr2_48537771_+	intronic
CAediting_179313	chr2_48538002_+	intronic
CAediting_179314	chr2_48538053_+	intronic
CAediting_179315	chr2_48538054_+	intronic
CAediting_179316	chr2_48538057_+	intronic
CAediting_179317	chr2_48538071_+	intronic
CAediting_179318	chr2_48538083_+	intronic
CAediting_179319	chr2_48538093_+	intronic
CAediting_179320	chr2_48538123_+	intronic
CAediting_179321	chr2_48538139_+	intronic
CAediting_179322	chr2_48538142_+	intronic
CAediting_179323	chr2_48538151_+	intronic
CAediting_179324	chr2_48538164_+	intronic
CAediting_179325	chr2_48538168_+	intronic
CAediting_179326	chr2_48538219_+	intronic
CAediting_179327	chr2_48538231_+	intronic
CAediting_179328	chr2_48539601_+	intronic
CAediting_179329	chr2_48539602_+	intronic
CAediting_179330	chr2_48539619_+	intronic
CAediting_179331	chr2_48541186_+	intronic
CAediting_179332	chr2_48541191_+	intronic
CAediting_179333	chr2_48541228_+	intronic
CAediting_179334	chr2_48541230_+	intronic
CAediting_179335	chr2_48541231_+	intronic
CAediting_179336	chr2_48541475_+	intronic
CAediting_179337	chr2_48541484_+	intronic
CAediting_179338	chr2_48541578_+	intronic
CAediting_179339	chr2_48541611_+	intronic
CAediting_179340	chr2_48541614_+	intronic
CAediting_179341	chr2_48541638_+	intronic
CAediting_179342	chr2_48543717_+	intronic
CAediting_179343	chr2_48543784_+	intronic
CAediting_179344	chr2_48546747_+	intronic
CAediting_179345	chr2_48546786_+	intronic
CAediting_179346	chr2_48546804_+	intronic
CAediting_179347	chr2_48546828_+	intronic
CAediting_179348	chr2_48548542_+	intronic
CAediting_179349	chr2_48548573_+	intronic
CAediting_179350	chr2_48549709_+	intronic
CAediting_179351	chr2_48549714_+	intronic
CAediting_179352	chr2_48549718_+	intronic
CAediting_179353	chr2_48549733_+	intronic
CAediting_179354	chr2_48549737_+	intronic
CAediting_179355	chr2_48549757_+	intronic
CAediting_179356	chr2_48549758_+	intronic
CAediting_179357	chr2_48549763_+	intronic
CAediting_179358	chr2_48565194_+	intronic
CAediting_179359	chr2_48565237_+	intronic
CAediting_179360	chr2_48565251_+	intronic
CAediting_179361	chr2_48565259_+	intronic
CAediting_179362	chr2_48565263_+	intronic
CAediting_179363	chr2_48587476_+	intronic
CAediting_179364	chr2_48592496_+	intronic
CAediting_179365	chr2_48596870_+	UTR3
CAediting_179366	chr2_48596874_+	UTR3
CAediting_179367	chr2_48596882_+	UTR3
CAediting_179368	chr2_48596894_+	UTR3
CAediting_179369	chr2_48596914_+	UTR3
CAediting_179370	chr2_48596978_+	UTR3
CAediting_179371	chr2_48596988_+	UTR3
CAediting_179372	chr2_48596990_+	UTR3
CAediting_179373	chr2_48597001_+	UTR3
CAediting_179374	chr2_48597014_+	UTR3
CAediting_179375	chr2_48597053_+	UTR3
CAediting_179376	chr2_48597067_+	UTR3
CAediting_179377	chr2_48597096_+	UTR3
CAediting_179378	chr2_48597127_+	UTR3
CAediting_179379	chr2_48598761_+	intronic
CAediting_179380	chr2_48598787_+	intronic
CAediting_179381	chr2_48598795_+	intronic
CAediting_179382	chr2_48598796_+	intronic
CAediting_179383	chr2_48598812_+	intronic
CAediting_179384	chr2_48598819_+	intronic
CAediting_179385	chr2_48598839_+	intronic
CAediting_179386	chr2_48598842_+	intronic
CAediting_179387	chr2_48598847_+	intronic
CAediting_179388	chr2_48598848_+	intronic
CAediting_179389	chr2_48598862_+	intronic
CAediting_179390	chr2_48598863_+	intronic
CAediting_179391	chr2_48598865_+	intronic
CAediting_179392	chr2_48598871_+	intronic
CAediting_179393	chr2_48598872_+	intronic
CAediting_179394	chr2_48598873_+	intronic
CAediting_179395	chr2_48598925_+	intronic
CAediting_179396	chr2_48598957_+	intronic
CAediting_179397	chr2_48598961_+	intronic
CAediting_179398	chr2_48598978_+	intronic
CAediting_179399	chr2_48598984_+	intronic
CAediting_179400	chr2_48598992_+	intronic
CAediting_179401	chr2_48598993_+	intronic
CAediting_179402	chr2_48599013_+	intronic
CAediting_179403	chr2_48599022_+	intronic
CAediting_179404	chr2_48599024_+	intronic
CAediting_179405	chr2_48599032_+	intronic
CAediting_179406	chr2_48599098_+	intronic
CAediting_179407	chr2_48603967_+	intronic
CAediting_179408	chr2_48603988_+	intronic
CAediting_179409	chr2_48604000_+	intronic
CAediting_179410	chr2_48604014_+	intronic
CAediting_179411	chr2_48604024_+	intronic
CAediting_179412	chr2_48604031_+	intronic
CAediting_179413	chr2_48604038_+	intronic
CAediting_179414	chr2_48604044_+	intronic
CAediting_179415	chr2_48604062_+	intronic
CAediting_179416	chr2_48604071_+	intronic
CAediting_179417	chr2_48604081_+	intronic
CAediting_179418	chr2_48604084_+	intronic
CAediting_179419	chr2_48604086_+	intronic
CAediting_179420	chr2_48604097_+	intronic
CAediting_179421	chr2_48604100_+	intronic
CAediting_179422	chr2_48604119_+	intronic
CAediting_179423	chr2_48604125_+	intronic
CAediting_179424	chr2_48604128_+	intronic
CAediting_179425	chr2_48604142_+	intronic
CAediting_179426	chr2_48604145_+	intronic
CAediting_179427	chr2_48604168_+	intronic
CAediting_179428	chr2_48604175_+	intronic
CAediting_179429	chr2_48604185_+	intronic
CAediting_179430	chr2_48604189_+	intronic
CAediting_179431	chr2_48604193_+	intronic
CAediting_179432	chr2_48604206_+	intronic
CAediting_179433	chr2_48604208_+	intronic
CAediting_179434	chr2_48604220_+	intronic
CAediting_179435	chr2_48604222_+	intronic
CAediting_179436	chr2_48604226_+	intronic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_179256	chr2_48532090_+	SINE	Alu	AluSx1
CAediting_179257	chr2_48532123_+	SINE	Alu	AluSx1
CAediting_179258	chr2_48533004_+	SINE	Alu	FLAM_C
CAediting_179259	chr2_48533016_+	SINE	Alu	FLAM_C
CAediting_179260	chr2_48533071_+	SINE	Alu	FLAM_C
CAediting_179261	chr2_48533129_+	SINE	Alu	AluSx1
CAediting_179262	chr2_48533134_+	SINE	Alu	AluSx1
CAediting_179263	chr2_48533159_+	SINE	Alu	AluSx1
CAediting_179264	chr2_48533217_+	SINE	Alu	AluSx1
CAediting_179265	chr2_48533221_+	SINE	Alu	AluSx1
CAediting_179266	chr2_48533222_+	SINE	Alu	AluSx1
CAediting_179267	chr2_48533297_+	SINE	Alu	AluSx1
CAediting_179268	chr2_48533434_+	SINE	Alu	AluSq
CAediting_179269	chr2_48533474_+	SINE	Alu	AluSq
CAediting_179270	chr2_48533479_+	SINE	Alu	AluSq
CAediting_179271	chr2_48533482_+	SINE	Alu	AluSq
CAediting_179272	chr2_48533490_+	SINE	Alu	AluSq
CAediting_179273	chr2_48533503_+	SINE	Alu	AluSq
CAediting_179274	chr2_48533513_+	SINE	Alu	AluSq
CAediting_179275	chr2_48533540_+	SINE	Alu	AluSq
CAediting_179276	chr2_48533543_+	SINE	Alu	AluSq
CAediting_179277	chr2_48533569_+	SINE	Alu	AluSq
CAediting_179278	chr2_48533570_+	SINE	Alu	AluSq
CAediting_179279	chr2_48533826_+	SINE	Alu	AluSp
CAediting_179280	chr2_48533969_+	SINE	Alu	AluSp
CAediting_179281	chr2_48534003_+	SINE	Alu	AluSp
CAediting_179282	chr2_48534015_+	SINE	Alu	AluSp
CAediting_179283	chr2_48534676_+	SINE	Alu	AluJo
CAediting_179284	chr2_48534698_+	SINE	Alu	AluJo
CAediting_179285	chr2_48536341_+	SINE	Alu	AluSx1
CAediting_179286	chr2_48536427_+	SINE	Alu	AluSx1
CAediting_179287	chr2_48537593_+	SINE	Alu	AluSx
CAediting_179288	chr2_48537594_+	SINE	Alu	AluSx
CAediting_179289	chr2_48537647_+	SINE	Alu	AluSx
CAediting_179290	chr2_48537648_+	SINE	Alu	AluSx
CAediting_179291	chr2_48537662_+	SINE	Alu	AluSx
CAediting_179292	chr2_48537663_+	SINE	Alu	AluSx
CAediting_179293	chr2_48537665_+	SINE	Alu	AluSx
CAediting_179294	chr2_48537671_+	SINE	Alu	AluSx
CAediting_179295	chr2_48537672_+	SINE	Alu	AluSx
CAediting_179296	chr2_48537687_+	SINE	Alu	AluSx
CAediting_179297	chr2_48537688_+	SINE	Alu	AluSx
CAediting_179298	chr2_48537691_+	SINE	Alu	AluSx
CAediting_179299	chr2_48537699_+	SINE	Alu	AluSx
CAediting_179300	chr2_48537700_+	SINE	Alu	AluSx
CAediting_179301	chr2_48537703_+	SINE	Alu	AluSx
CAediting_179302	chr2_48537729_+	SINE	Alu	AluSx
CAediting_179303	chr2_48537730_+	SINE	Alu	AluSx
CAediting_179304	chr2_48537735_+	SINE	Alu	AluSx
CAediting_179305	chr2_48537739_+	SINE	Alu	AluSx
CAediting_179306	chr2_48537752_+	SINE	Alu	AluSx
CAediting_179307	chr2_48537760_+	SINE	Alu	AluSx
CAediting_179308	chr2_48537761_+	SINE	Alu	AluSx
CAediting_179309	chr2_48537762_+	SINE	Alu	AluSx
CAediting_179310	chr2_48537765_+	SINE	Alu	AluSx
CAediting_179311	chr2_48537770_+	SINE	Alu	AluSx
CAediting_179312	chr2_48537771_+	SINE	Alu	AluSx
CAediting_179313	chr2_48538002_+	SINE	Alu	AluSc8
CAediting_179314	chr2_48538053_+	SINE	Alu	AluSc8
CAediting_179315	chr2_48538054_+	SINE	Alu	AluSc8
CAediting_179316	chr2_48538057_+	SINE	Alu	AluSc8
CAediting_179317	chr2_48538071_+	SINE	Alu	AluSc8
CAediting_179318	chr2_48538083_+	SINE	Alu	AluSc8
CAediting_179319	chr2_48538093_+	SINE	Alu	AluSc8
CAediting_179320	chr2_48538123_+	SINE	Alu	AluSc8
CAediting_179321	chr2_48538139_+	SINE	Alu	AluSc8
CAediting_179322	chr2_48538142_+	SINE	Alu	AluSc8
CAediting_179323	chr2_48538151_+	SINE	Alu	AluSc8
CAediting_179324	chr2_48538164_+	SINE	Alu	AluSc8
CAediting_179325	chr2_48538168_+	SINE	Alu	AluSc8
CAediting_179326	chr2_48538219_+	SINE	Alu	AluSc8
CAediting_179327	chr2_48538231_+	SINE	Alu	AluSc8
CAediting_179328	chr2_48539601_+	SINE	Alu	AluSg
CAediting_179329	chr2_48539602_+	SINE	Alu	AluSg
CAediting_179330	chr2_48539619_+	SINE	Alu	AluSg
CAediting_179331	chr2_48541186_+	SINE	Alu	AluSz
CAediting_179332	chr2_48541191_+	SINE	Alu	AluSz
CAediting_179333	chr2_48541228_+	SINE	Alu	AluSz
CAediting_179334	chr2_48541230_+	SINE	Alu	AluSz
CAediting_179335	chr2_48541231_+	SINE	Alu	AluSz
CAediting_179336	chr2_48541475_+	SINE	Alu	AluSq2
CAediting_179337	chr2_48541484_+	SINE	Alu	AluSq2
CAediting_179338	chr2_48541578_+	SINE	Alu	AluSq2
CAediting_179339	chr2_48541611_+	SINE	Alu	AluSq2
CAediting_179340	chr2_48541614_+	SINE	Alu	AluSq2
CAediting_179341	chr2_48541638_+	SINE	Alu	AluSq2
CAediting_179342	chr2_48543717_+	SINE	Alu	AluSx
CAediting_179343	chr2_48543784_+	SINE	Alu	AluSx
CAediting_179344	chr2_48546747_+	SINE	Alu	AluJr
CAediting_179345	chr2_48546786_+	SINE	Alu	AluJr
CAediting_179346	chr2_48546804_+	SINE	Alu	AluJr
CAediting_179347	chr2_48546828_+	SINE	Alu	AluJr
CAediting_179348	chr2_48548542_+	SINE	Alu	AluSx
CAediting_179349	chr2_48548573_+	SINE	Alu	AluSx
CAediting_179350	chr2_48549709_+	SINE	Alu	AluSx1
CAediting_179351	chr2_48549714_+	SINE	Alu	AluSx1
CAediting_179352	chr2_48549718_+	SINE	Alu	AluSx1
CAediting_179353	chr2_48549733_+	SINE	Alu	AluSx1
CAediting_179354	chr2_48549737_+	SINE	Alu	AluSx1
CAediting_179355	chr2_48549757_+	SINE	Alu	AluSx1
CAediting_179356	chr2_48549758_+	SINE	Alu	AluSx1
CAediting_179357	chr2_48549763_+	SINE	Alu	AluSx1
CAediting_179358	chr2_48565194_+	SINE	Alu	AluY
CAediting_179359	chr2_48565237_+	SINE	Alu	AluY
CAediting_179360	chr2_48565251_+	SINE	Alu	AluY
CAediting_179361	chr2_48565259_+	SINE	Alu	AluY
CAediting_179362	chr2_48565263_+	SINE	Alu	AluY
CAediting_179363	chr2_48587476_+	SINE	Alu	AluSx4
CAediting_179364	chr2_48592496_+	SINE	Alu	AluSx1
CAediting_179365	chr2_48596870_+	SINE	Alu	AluSx
CAediting_179366	chr2_48596874_+	SINE	Alu	AluSx
CAediting_179367	chr2_48596882_+	SINE	Alu	AluSx
CAediting_179368	chr2_48596894_+	SINE	Alu	AluSx
CAediting_179369	chr2_48596914_+	SINE	Alu	AluSx
CAediting_179370	chr2_48596978_+	SINE	Alu	AluSx
CAediting_179371	chr2_48596988_+	SINE	Alu	AluSx
CAediting_179372	chr2_48596990_+	SINE	Alu	AluSx
CAediting_179373	chr2_48597001_+	SINE	Alu	AluSx
CAediting_179374	chr2_48597014_+	SINE	Alu	AluSx
CAediting_179375	chr2_48597053_+	SINE	Alu	AluSx
CAediting_179376	chr2_48597067_+	SINE	Alu	AluSx
CAediting_179377	chr2_48597096_+	SINE	Alu	AluSx
CAediting_179378	chr2_48597127_+	SINE	Alu	AluSx
CAediting_179379	chr2_48598761_+	LTR	ERV1	LTR37A
CAediting_179380	chr2_48598787_+	SINE	Alu	AluY
CAediting_179381	chr2_48598795_+	SINE	Alu	AluY
CAediting_179382	chr2_48598796_+	SINE	Alu	AluY
CAediting_179383	chr2_48598812_+	SINE	Alu	AluY
CAediting_179384	chr2_48598819_+	SINE	Alu	AluY
CAediting_179385	chr2_48598839_+	SINE	Alu	AluY
CAediting_179386	chr2_48598842_+	SINE	Alu	AluY
CAediting_179387	chr2_48598847_+	SINE	Alu	AluY
CAediting_179388	chr2_48598848_+	SINE	Alu	AluY
CAediting_179389	chr2_48598862_+	SINE	Alu	AluY
CAediting_179390	chr2_48598863_+	SINE	Alu	AluY
CAediting_179391	chr2_48598865_+	SINE	Alu	AluY
CAediting_179392	chr2_48598871_+	SINE	Alu	AluY
CAediting_179393	chr2_48598872_+	SINE	Alu	AluY
CAediting_179394	chr2_48598873_+	SINE	Alu	AluY
CAediting_179395	chr2_48598925_+	SINE	Alu	AluY
CAediting_179396	chr2_48598957_+	SINE	Alu	AluY
CAediting_179397	chr2_48598961_+	SINE	Alu	AluY
CAediting_179398	chr2_48598978_+	SINE	Alu	AluY
CAediting_179399	chr2_48598984_+	SINE	Alu	AluY
CAediting_179400	chr2_48598992_+	SINE	Alu	AluY
CAediting_179401	chr2_48598993_+	SINE	Alu	AluY
CAediting_179402	chr2_48599013_+	SINE	Alu	AluY
CAediting_179403	chr2_48599022_+	SINE	Alu	AluY
CAediting_179404	chr2_48599024_+	SINE	Alu	AluY
CAediting_179405	chr2_48599032_+	SINE	Alu	AluY
CAediting_179406	chr2_48599098_+	SINE	Alu	AluY
CAediting_179407	chr2_48603967_+	SINE	Alu	AluSq
CAediting_179408	chr2_48603988_+	SINE	Alu	AluSq
CAediting_179409	chr2_48604000_+	SINE	Alu	AluSq
CAediting_179410	chr2_48604014_+	SINE	Alu	AluSq
CAediting_179411	chr2_48604024_+	SINE	Alu	AluSq
CAediting_179412	chr2_48604031_+	SINE	Alu	AluSq
CAediting_179413	chr2_48604038_+	SINE	Alu	AluSq
CAediting_179414	chr2_48604044_+	SINE	Alu	AluSq
CAediting_179415	chr2_48604062_+	SINE	Alu	AluSq
CAediting_179416	chr2_48604071_+	SINE	Alu	AluSq
CAediting_179417	chr2_48604081_+	SINE	Alu	AluSq
CAediting_179418	chr2_48604084_+	SINE	Alu	AluSq
CAediting_179419	chr2_48604086_+	SINE	Alu	AluSq
CAediting_179420	chr2_48604097_+	SINE	Alu	AluSq
CAediting_179421	chr2_48604100_+	SINE	Alu	AluSq
CAediting_179422	chr2_48604119_+	SINE	Alu	AluSq
CAediting_179423	chr2_48604125_+	SINE	Alu	AluSq
CAediting_179424	chr2_48604128_+	SINE	Alu	AluSq
CAediting_179425	chr2_48604142_+	SINE	Alu	AluSq
CAediting_179426	chr2_48604145_+	SINE	Alu	AluSq
CAediting_179427	chr2_48604168_+	SINE	Alu	AluSq
CAediting_179428	chr2_48604175_+	SINE	Alu	AluSq
CAediting_179429	chr2_48604185_+	SINE	Alu	AluSq
CAediting_179430	chr2_48604189_+	SINE	Alu	AluSq
CAediting_179431	chr2_48604193_+	SINE	Alu	AluSq
CAediting_179432	chr2_48604206_+	SINE	Alu	AluSq
CAediting_179433	chr2_48604208_+	SINE	Alu	AluSq
CAediting_179434	chr2_48604220_+	SINE	Alu	AluSq
CAediting_179435	chr2_48604222_+	SINE	Alu	AluSq
CAediting_179436	chr2_48604226_+	SINE	Alu	AluSq

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RNA A-to-I editing events in the alternative splicing sites for STON1-GTF2A1L

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000068781.19.STON1-GTF2A1L.

Correlation between RNA A-to-I editing and PSI for ENSG00000068781.19.STON1-GTF2A1L.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for STON1-GTF2A1L

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for STON1-GTF2A1L

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for STON1-GTF2A1L

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_604450	chr7_133034877_-	ENSG00000068781.19	ENST00000405008	hsa-miR-3654	48679525	48679532	8mer-1a	48679514	48679532	142	-13.71
CAediting_604450	chr7_133034877_-	ENSG00000068781.19	ENST00000394754	hsa-miR-3654	48679525	48679532	8mer-1a	48679514	48679532	142	-13.71

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for STON1-GTF2A1L

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST

ENST type

RNA structure without RNA A-to-I editing.

RNA structure with RNA A-to-I editing.

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID

ENST

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

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Relation with ADAR for STON1-GTF2A1L

Correlation between ADAR gene expression and RNA editing frequency

Cancer	CAeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
LGG	CAediting_179407	chr2_48603967_+	7.41301984566185e-12	0.434255884425518	.	.	.	.
LGG	CAediting_179410	chr2_48604014_+	.	.	.	.	0.0279101959276664	0.14562564010853
PRAD	CAediting_179410	chr2_48604014_+	.	.	.	.	0.036974956101492	0.201014645241512
LGG	CAediting_179413	chr2_48604038_+	0.045146693440378	0.247465710196171	.	.	.	.
LGG	CAediting_179418	chr2_48604084_+	0.011457709434211	0.162967123632051	.	.	0.0289670728433111	0.141003459414171
STAD	CAediting_179419	chr2_48604086_+	0.0411016529130179	0.269082727691988	.	.	.	.
OV	CAediting_179426	chr2_48604145_+	0.0134178674220773	0.296346635225478	.	.	.	.
LGG	CAediting_179431	chr2_48604193_+	3.63071672573761e-12	0.443577890530837	.	.	.	.
BLCA	CAediting_179433	chr2_48604208_+	0.00626370528141069	0.346271695878286	.	.	0.0462428586450833	0.256222378374057
LGG	CAediting_179433	chr2_48604208_+	0.00174065945571844	0.159495133188045	.	.	0.00456456411582348	0.144635952402577
BRCA	CAediting_179433	chr2_48604208_+	0.000564109501740712	0.329435006243545	.	.	.	.
LUSC	CAediting_179433	chr2_48604208_+	1.40152314770262e-07	0.539699882967278	.	.	.	.
GBM	CAediting_179433	chr2_48604208_+	0.00333075165660363	0.290827523105414	.	.	.	.
PRAD	CAediting_179433	chr2_48604208_+	0.0007792308730948	0.175352103739076	.	.	.	.
KIRC	CAediting_179433	chr2_48604208_+	0.0328960091476979	0.133652274817109	.	.	.	.
UCEC	CAediting_179433	chr2_48604208_+	0.0384977109436734	0.287881667190152	.	.	.	.
OV	CAediting_179433	chr2_48604208_+	0.0228790605432034	0.238377377186536	.	.	.	.
SKCM	CAediting_179433	chr2_48604208_+	0.00452371926129527	0.265230681076058	.	.	.	.
SARC	CAediting_179433	chr2_48604208_+	0.0353832959891653	0.199043208725392	.	.	.	.

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Relation with cancer stages for STON1-GTF2A1L

Correlation between Cancer stages and RNA editing frequency

Cancer	Stage_type	CAeditomID	position	P-val	Coeff.
OV	clinical_stage	CAediting_179424	chr2_48604128_+	0.028058317225221	0.266465324653313

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Relation with survival for STON1-GTF2A1L

Correlation between RNA editing and survival

Cancer	CAeditomID	position	KMpvalue	Coxpvalue	CoxHR
LGG	CAediting_179426	chr2_48604145_+	0.0163057824430314	0.0210206	0.0864323
STAD	CAediting_179384	chr2_48598819_+	0.011620419695616	0.00488548	202.321
SARC	CAediting_179419	chr2_48604086_+	0.0220863078127705	0.00530466	41.7937

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RelatedDrugs for STON1-GTF2A1L

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for STON1-GTF2A1L

Diseases associated with this gene.
(DisGeNet 7.0)

Gene

Disease ID

Disease name

# pubmeds

Source

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene