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Editing gene: PPP1R42 (CAeditome ID:286187)

Gene summary for PPP1R42

Gene summary

Gene information	Gene symbol	PPP1R42
	Gene ID	286187
	Gene name	protein phosphatase 1 regulatory subunit 42
	Synonyms	LRRC67\|TLLR\|TLRR\|dtr
	Cytomap	8q13.1
	Type of gene	protein-coding
	Description	protein phosphatase 1 regulatory subunit 42leucine rich repeat containing 67leucine-rich repeat-containing protein 67testis leucine-rich repeat
	Modification date	20210518
	UniProtAcc	Q7Z4L9
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene

GO ID

GO term

PubMed ID

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RNA A-to-I events for PPP1R42

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000178125.13

RNA A-to-I editing events in Cancer.

CAediting_643931(66982691, -), CAediting_643932(66986212, -), CAediting_643933(66986213, -), CAediting_643934(66986271, -), CAediting_643935(67003037, -), CAediting_643936(67024102, -), CAediting_643937(67025062, -), CAediting_643938(67025076, -), CAediting_643939(67025217, -), CAediting_643940(67025218, -), CAediting_643941(67025220, -), CAediting_643942(67026653, -), CAediting_643943(67026708, -), CAediting_643944(67026710, -), CAediting_643945(67026732, -), CAediting_643946(67026749, -), CAediting_643947(67026756, -), CAediting_643948(67026800, -), CAediting_643949(67026990, -), CAediting_643950(67027038, -), CAediting_643951(67027061, -), CAediting_643952(67044072, -), CAediting_643953(67044078, -), CAediting_643954(67044080, -), CAediting_643955(67044090, -), CAediting_643956(67044095, -), CAediting_643957(67044100, -), CAediting_643958(67044108, -), CAediting_643959(67044119, -), CAediting_643960(67044128, -), CAediting_643961(67044132, -), CAediting_643962(67044135, -), CAediting_643963(67044140, -), CAediting_643964(67044145, -), CAediting_643965(67044148, -), CAediting_643966(67044151, -), CAediting_643967(67044152, -), CAediting_643968(67044154, -), CAediting_643969(67044158, -), CAediting_643970(67044164, -), CAediting_643971(67044167, -), CAediting_643972(67044171, -), CAediting_643973(67044175, -), CAediting_643974(67044189, -), CAediting_643975(67044199, -), CAediting_643976(67044207, -), CAediting_643977(67044211, -), CAediting_643978(67044212, -), CAediting_643979(67044213, -), CAediting_643980(67044214, -), CAediting_643981(67044215, -), CAediting_643982(67044218, -), CAediting_643983(67044224, -), CAediting_643984(67044225, -), CAediting_643985(67044226, -), CAediting_643986(67044235, -), CAediting_643987(67044240, -), CAediting_643988(67044241, -), CAediting_643989(67044242, -), CAediting_643990(67044243, -), CAediting_643991(67044248, -), CAediting_643992(67044250, -), CAediting_643993(67044260, -), CAediting_643994(67044263, -), CAediting_643995(67044264, -), CAediting_643996(67044273, -), CAediting_643997(67044274, -), CAediting_643998(67044293, -), CAediting_643999(67044297, -), CAediting_644000(67044298, -), CAediting_644001(67044303, -), CAediting_644002(67044319, -), CAediting_644003(67044320, -), CAediting_644004(67044322, -), CAediting_644005(67044328, -), CAediting_644006(67044332, -), CAediting_644007(67044338, -), CAediting_644008(67044598, -), CAediting_644009(67044602, -), CAediting_644010(67044604, -), CAediting_644011(67044605, -), CAediting_644012(67044626, -), CAediting_644013(67044627, -), CAediting_644014(67044632, -), CAediting_644015(67044634, -), CAediting_644016(67044638, -), CAediting_644017(67044665, -), CAediting_644018(67044668, -), CAediting_644019(67044672, -), CAediting_644020(67044676, -), CAediting_644021(67044683, -), CAediting_644022(67044689, -), CAediting_644023(67044692, -), CAediting_644024(67044702, -), CAediting_644025(67044708, -), CAediting_644026(67044709, -), CAediting_644027(67044711, -), CAediting_644028(67044721, -), CAediting_644029(67044724, -), CAediting_644030(67044728, -), CAediting_644031(67044732, -), CAediting_644032(67044737, -), CAediting_644033(67044738, -), CAediting_644034(67044744, -), CAediting_644035(67044763, -), CAediting_644036(67044764, -), CAediting_644037(67044767, -), CAediting_644038(67044769, -), CAediting_644039(67044773, -), CAediting_644040(67044776, -), CAediting_644041(67044778, -), CAediting_644042(67044779, -), CAediting_644043(67044782, -), CAediting_644044(67044793, -), CAediting_644045(67044794, -), CAediting_644046(67044795, -), CAediting_644047(67044803, -), CAediting_644048(67044804, -), CAediting_644049(67044813, -), CAediting_644050(67044818, -), CAediting_644051(67044819, -), CAediting_644052(67044824, -), CAediting_644053(67044827, -), CAediting_644054(67044830, -), CAediting_644055(67044832, -), CAediting_644056(67044837, -), CAediting_644057(67044840, -), CAediting_644058(67044842, -), CAediting_644059(67044846, -), CAediting_644060(67044850, -), CAediting_644061(67044864, -), CAediting_644062(67044872, -), CAediting_644063(67044873, -), CAediting_644064(67044881, -), CAediting_644065(67044889, -), CAediting_644066(67044891, -), CAediting_644067(67044900, -), CAediting_644068(67045189, -), CAediting_644069(67045207, -), CAediting_644070(67045222, -), CAediting_644071(67045230, -), CAediting_644072(67045235, -), CAediting_644073(67045247, -), CAediting_644074(67045248, -), CAediting_644075(67045272, -), CAediting_644076(67045284, -), CAediting_644077(67045286, -), CAediting_644078(67045295, -), CAediting_644079(67045305, -), CAediting_644080(67045306, -), CAediting_644081(67045326, -), CAediting_644082(67045330, -), CAediting_644083(67045332, -), CAediting_644084(67045334, -), CAediting_644085(67045341, -), CAediting_644086(67045342, -), CAediting_644087(67045345, -), CAediting_644088(67045346, -), CAediting_644089(67045367, -), CAediting_644090(67045371, -), CAediting_644091(67045372, -), CAediting_644092(67045391, -), CAediting_644093(67045407, -), CAediting_644094(67045410, -), CAediting_644095(67045415, -), CAediting_644096(67045445, -), CAediting_644097(67045448, -), CAediting_644098(67045450, -), CAediting_644099(67049388, -), CAediting_644100(67049395, -), CAediting_644101(67050274, -), CAediting_644102(67052447, -), CAediting_644103(67052490, -), CAediting_644104(67052757, -), CAediting_644105(67053153, -), CAediting_644106(67056383, -), CAediting_644107(67056418, -), CAediting_644108(67056450, -),

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RNA editing positional annotations for PPP1R42 using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_643931	chr8_66982691_-	ncRNA_intronic
CAediting_643932	chr8_66986212_-	ncRNA_intronic
CAediting_643933	chr8_66986213_-	ncRNA_intronic
CAediting_643934	chr8_66986271_-	ncRNA_intronic
CAediting_643935	chr8_67003037_-	ncRNA_intronic
CAediting_643936	chr8_67024102_-	ncRNA_intronic
CAediting_643937	chr8_67025062_-	ncRNA_intronic
CAediting_643938	chr8_67025076_-	ncRNA_intronic
CAediting_643939	chr8_67025217_-	ncRNA_intronic
CAediting_643940	chr8_67025218_-	ncRNA_intronic
CAediting_643941	chr8_67025220_-	ncRNA_intronic
CAediting_643942	chr8_67026653_-	ncRNA_intronic
CAediting_643943	chr8_67026708_-	ncRNA_intronic
CAediting_643944	chr8_67026710_-	ncRNA_intronic
CAediting_643945	chr8_67026732_-	ncRNA_intronic
CAediting_643946	chr8_67026749_-	ncRNA_intronic
CAediting_643947	chr8_67026756_-	ncRNA_intronic
CAediting_643948	chr8_67026800_-	ncRNA_intronic
CAediting_643949	chr8_67026990_-	ncRNA_exonic
CAediting_643950	chr8_67027038_-	ncRNA_intronic
CAediting_643951	chr8_67027061_-	ncRNA_intronic
CAediting_643952	chr8_67044072_-	ncRNA_exonic
CAediting_643953	chr8_67044078_-	ncRNA_exonic
CAediting_643954	chr8_67044080_-	ncRNA_exonic
CAediting_643955	chr8_67044090_-	ncRNA_exonic
CAediting_643956	chr8_67044095_-	ncRNA_exonic
CAediting_643957	chr8_67044100_-	ncRNA_exonic
CAediting_643958	chr8_67044108_-	ncRNA_exonic
CAediting_643959	chr8_67044119_-	ncRNA_exonic
CAediting_643960	chr8_67044128_-	ncRNA_exonic
CAediting_643961	chr8_67044132_-	ncRNA_exonic
CAediting_643962	chr8_67044135_-	ncRNA_exonic
CAediting_643963	chr8_67044140_-	ncRNA_exonic
CAediting_643964	chr8_67044145_-	ncRNA_exonic
CAediting_643965	chr8_67044148_-	ncRNA_exonic
CAediting_643966	chr8_67044151_-	ncRNA_exonic
CAediting_643967	chr8_67044152_-	ncRNA_exonic
CAediting_643968	chr8_67044154_-	ncRNA_exonic
CAediting_643969	chr8_67044158_-	ncRNA_exonic
CAediting_643970	chr8_67044164_-	ncRNA_exonic
CAediting_643971	chr8_67044167_-	ncRNA_exonic
CAediting_643972	chr8_67044171_-	ncRNA_exonic
CAediting_643973	chr8_67044175_-	ncRNA_exonic
CAediting_643974	chr8_67044189_-	ncRNA_exonic
CAediting_643975	chr8_67044199_-	ncRNA_exonic
CAediting_643976	chr8_67044207_-	ncRNA_exonic
CAediting_643977	chr8_67044211_-	ncRNA_exonic
CAediting_643978	chr8_67044212_-	ncRNA_exonic
CAediting_643979	chr8_67044213_-	ncRNA_exonic
CAediting_643980	chr8_67044214_-	ncRNA_exonic
CAediting_643981	chr8_67044215_-	ncRNA_exonic
CAediting_643982	chr8_67044218_-	ncRNA_exonic
CAediting_643983	chr8_67044224_-	ncRNA_exonic
CAediting_643984	chr8_67044225_-	ncRNA_exonic
CAediting_643985	chr8_67044226_-	ncRNA_exonic
CAediting_643986	chr8_67044235_-	ncRNA_exonic
CAediting_643987	chr8_67044240_-	ncRNA_exonic
CAediting_643988	chr8_67044241_-	ncRNA_exonic
CAediting_643989	chr8_67044242_-	ncRNA_exonic
CAediting_643990	chr8_67044243_-	ncRNA_exonic
CAediting_643991	chr8_67044248_-	ncRNA_exonic
CAediting_643992	chr8_67044250_-	ncRNA_exonic
CAediting_643993	chr8_67044260_-	ncRNA_exonic
CAediting_643994	chr8_67044263_-	ncRNA_exonic
CAediting_643995	chr8_67044264_-	ncRNA_exonic
CAediting_643996	chr8_67044273_-	ncRNA_exonic
CAediting_643997	chr8_67044274_-	ncRNA_exonic
CAediting_643998	chr8_67044293_-	ncRNA_exonic
CAediting_643999	chr8_67044297_-	ncRNA_exonic
CAediting_644000	chr8_67044298_-	ncRNA_exonic
CAediting_644001	chr8_67044303_-	ncRNA_exonic
CAediting_644002	chr8_67044319_-	ncRNA_exonic
CAediting_644003	chr8_67044320_-	ncRNA_exonic
CAediting_644004	chr8_67044322_-	ncRNA_exonic
CAediting_644005	chr8_67044328_-	ncRNA_exonic
CAediting_644006	chr8_67044332_-	ncRNA_exonic
CAediting_644007	chr8_67044338_-	ncRNA_exonic
CAediting_644008	chr8_67044598_-	ncRNA_exonic
CAediting_644009	chr8_67044602_-	ncRNA_exonic
CAediting_644010	chr8_67044604_-	ncRNA_exonic
CAediting_644011	chr8_67044605_-	ncRNA_exonic
CAediting_644012	chr8_67044626_-	ncRNA_exonic
CAediting_644013	chr8_67044627_-	ncRNA_exonic
CAediting_644014	chr8_67044632_-	ncRNA_exonic
CAediting_644015	chr8_67044634_-	ncRNA_exonic
CAediting_644016	chr8_67044638_-	ncRNA_exonic
CAediting_644017	chr8_67044665_-	ncRNA_exonic
CAediting_644018	chr8_67044668_-	ncRNA_exonic
CAediting_644019	chr8_67044672_-	ncRNA_exonic
CAediting_644020	chr8_67044676_-	ncRNA_exonic
CAediting_644021	chr8_67044683_-	ncRNA_exonic
CAediting_644022	chr8_67044689_-	ncRNA_exonic
CAediting_644023	chr8_67044692_-	ncRNA_exonic
CAediting_644024	chr8_67044702_-	ncRNA_exonic
CAediting_644025	chr8_67044708_-	ncRNA_exonic
CAediting_644026	chr8_67044709_-	ncRNA_exonic
CAediting_644027	chr8_67044711_-	ncRNA_exonic
CAediting_644028	chr8_67044721_-	ncRNA_exonic
CAediting_644029	chr8_67044724_-	ncRNA_exonic
CAediting_644030	chr8_67044728_-	ncRNA_exonic
CAediting_644031	chr8_67044732_-	ncRNA_exonic
CAediting_644032	chr8_67044737_-	ncRNA_exonic
CAediting_644033	chr8_67044738_-	ncRNA_exonic
CAediting_644034	chr8_67044744_-	ncRNA_exonic
CAediting_644035	chr8_67044763_-	ncRNA_exonic
CAediting_644036	chr8_67044764_-	ncRNA_exonic
CAediting_644037	chr8_67044767_-	ncRNA_exonic
CAediting_644038	chr8_67044769_-	ncRNA_exonic
CAediting_644039	chr8_67044773_-	ncRNA_exonic
CAediting_644040	chr8_67044776_-	ncRNA_exonic
CAediting_644041	chr8_67044778_-	ncRNA_exonic
CAediting_644042	chr8_67044779_-	ncRNA_exonic
CAediting_644043	chr8_67044782_-	ncRNA_exonic
CAediting_644044	chr8_67044793_-	ncRNA_exonic
CAediting_644045	chr8_67044794_-	ncRNA_exonic
CAediting_644046	chr8_67044795_-	ncRNA_exonic
CAediting_644047	chr8_67044803_-	ncRNA_exonic
CAediting_644048	chr8_67044804_-	ncRNA_exonic
CAediting_644049	chr8_67044813_-	ncRNA_exonic
CAediting_644050	chr8_67044818_-	ncRNA_exonic
CAediting_644051	chr8_67044819_-	ncRNA_exonic
CAediting_644052	chr8_67044824_-	ncRNA_exonic
CAediting_644053	chr8_67044827_-	ncRNA_exonic
CAediting_644054	chr8_67044830_-	ncRNA_exonic
CAediting_644055	chr8_67044832_-	ncRNA_exonic
CAediting_644056	chr8_67044837_-	ncRNA_exonic
CAediting_644057	chr8_67044840_-	ncRNA_exonic
CAediting_644058	chr8_67044842_-	ncRNA_exonic
CAediting_644059	chr8_67044846_-	ncRNA_exonic
CAediting_644060	chr8_67044850_-	ncRNA_exonic
CAediting_644061	chr8_67044864_-	ncRNA_exonic
CAediting_644062	chr8_67044872_-	ncRNA_exonic
CAediting_644063	chr8_67044873_-	ncRNA_exonic
CAediting_644064	chr8_67044881_-	ncRNA_exonic
CAediting_644065	chr8_67044889_-	ncRNA_exonic
CAediting_644066	chr8_67044891_-	ncRNA_exonic
CAediting_644067	chr8_67044900_-	ncRNA_exonic
CAediting_644068	chr8_67045189_-	ncRNA_exonic
CAediting_644069	chr8_67045207_-	ncRNA_exonic
CAediting_644070	chr8_67045222_-	ncRNA_exonic
CAediting_644071	chr8_67045230_-	ncRNA_exonic
CAediting_644072	chr8_67045235_-	ncRNA_exonic
CAediting_644073	chr8_67045247_-	ncRNA_exonic
CAediting_644074	chr8_67045248_-	ncRNA_exonic
CAediting_644075	chr8_67045272_-	ncRNA_exonic
CAediting_644076	chr8_67045284_-	ncRNA_exonic
CAediting_644077	chr8_67045286_-	ncRNA_exonic
CAediting_644078	chr8_67045295_-	ncRNA_exonic
CAediting_644079	chr8_67045305_-	ncRNA_exonic
CAediting_644080	chr8_67045306_-	ncRNA_exonic
CAediting_644081	chr8_67045326_-	ncRNA_exonic
CAediting_644082	chr8_67045330_-	ncRNA_exonic
CAediting_644083	chr8_67045332_-	ncRNA_exonic
CAediting_644084	chr8_67045334_-	ncRNA_exonic
CAediting_644085	chr8_67045341_-	ncRNA_exonic
CAediting_644086	chr8_67045342_-	ncRNA_exonic
CAediting_644087	chr8_67045345_-	ncRNA_exonic
CAediting_644088	chr8_67045346_-	ncRNA_exonic
CAediting_644089	chr8_67045367_-	ncRNA_exonic
CAediting_644090	chr8_67045371_-	ncRNA_exonic
CAediting_644091	chr8_67045372_-	ncRNA_exonic
CAediting_644092	chr8_67045391_-	ncRNA_exonic
CAediting_644093	chr8_67045407_-	ncRNA_exonic
CAediting_644094	chr8_67045410_-	ncRNA_exonic
CAediting_644095	chr8_67045415_-	ncRNA_exonic
CAediting_644096	chr8_67045445_-	ncRNA_exonic
CAediting_644097	chr8_67045448_-	ncRNA_exonic
CAediting_644098	chr8_67045450_-	ncRNA_exonic
CAediting_644099	chr8_67049388_-	ncRNA_intronic
CAediting_644100	chr8_67049395_-	ncRNA_intronic
CAediting_644101	chr8_67050274_-	ncRNA_intronic
CAediting_644102	chr8_67052447_-	ncRNA_intronic
CAediting_644103	chr8_67052490_-	ncRNA_intronic
CAediting_644104	chr8_67052757_-	ncRNA_intronic
CAediting_644105	chr8_67053153_-	ncRNA_intronic
CAediting_644106	chr8_67056383_-	ncRNA_intronic
CAediting_644107	chr8_67056418_-	ncRNA_intronic
CAediting_644108	chr8_67056450_-	ncRNA_intronic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_643931	chr8_66982691_-	SINE	Alu	AluJo
CAediting_643932	chr8_66986212_-	SINE	Alu	AluYb8
CAediting_643933	chr8_66986213_-	SINE	Alu	AluYb8
CAediting_643935	chr8_67003037_-	SINE	Alu	AluSq2
CAediting_643936	chr8_67024102_-	SINE	Alu	AluSc
CAediting_643937	chr8_67025062_-	SINE	Alu	AluJr
CAediting_643938	chr8_67025076_-	SINE	Alu	AluJr
CAediting_643939	chr8_67025217_-	SINE	Alu	AluJr
CAediting_643940	chr8_67025218_-	SINE	Alu	AluJr
CAediting_643941	chr8_67025220_-	SINE	Alu	AluJr
CAediting_643942	chr8_67026653_-	SINE	Alu	AluJb
CAediting_643943	chr8_67026708_-	SINE	Alu	AluJb
CAediting_643944	chr8_67026710_-	SINE	Alu	AluJb
CAediting_643945	chr8_67026732_-	SINE	Alu	AluJb
CAediting_643946	chr8_67026749_-	SINE	Alu	AluJb
CAediting_643947	chr8_67026756_-	SINE	Alu	AluJb
CAediting_643948	chr8_67026800_-	SINE	Alu	AluJb
CAediting_643949	chr8_67026990_-	SINE	Alu	AluSz
CAediting_643950	chr8_67027038_-	SINE	Alu	AluSz
CAediting_643951	chr8_67027061_-	SINE	Alu	AluSz
CAediting_643952	chr8_67044072_-	SINE	Alu	AluSz6
CAediting_643953	chr8_67044078_-	SINE	Alu	AluSz6
CAediting_643954	chr8_67044080_-	SINE	Alu	AluSz6
CAediting_643955	chr8_67044090_-	SINE	Alu	AluSz6
CAediting_643956	chr8_67044095_-	SINE	Alu	AluSz6
CAediting_643957	chr8_67044100_-	SINE	Alu	AluSz6
CAediting_643958	chr8_67044108_-	SINE	Alu	AluSz6
CAediting_643959	chr8_67044119_-	SINE	Alu	AluSz6
CAediting_643960	chr8_67044128_-	SINE	Alu	AluSz6
CAediting_643961	chr8_67044132_-	SINE	Alu	AluSz6
CAediting_643962	chr8_67044135_-	SINE	Alu	AluSz6
CAediting_643963	chr8_67044140_-	SINE	Alu	AluSz6
CAediting_643964	chr8_67044145_-	SINE	Alu	AluSz6
CAediting_643965	chr8_67044148_-	SINE	Alu	AluSz6
CAediting_643966	chr8_67044151_-	SINE	Alu	AluSz6
CAediting_643967	chr8_67044152_-	SINE	Alu	AluSz6
CAediting_643968	chr8_67044154_-	SINE	Alu	AluSz6
CAediting_643969	chr8_67044158_-	SINE	Alu	AluSz6
CAediting_643970	chr8_67044164_-	SINE	Alu	AluSz6
CAediting_643971	chr8_67044167_-	SINE	Alu	AluSz6
CAediting_643972	chr8_67044171_-	SINE	Alu	AluSz6
CAediting_643973	chr8_67044175_-	SINE	Alu	AluSz6
CAediting_643974	chr8_67044189_-	SINE	Alu	AluSz6
CAediting_643975	chr8_67044199_-	SINE	Alu	AluSz6
CAediting_643976	chr8_67044207_-	SINE	Alu	AluSz6
CAediting_643977	chr8_67044211_-	SINE	Alu	AluSz6
CAediting_643978	chr8_67044212_-	SINE	Alu	AluSz6
CAediting_643979	chr8_67044213_-	SINE	Alu	AluSz6
CAediting_643980	chr8_67044214_-	SINE	Alu	AluSz6
CAediting_643981	chr8_67044215_-	SINE	Alu	AluSz6
CAediting_643982	chr8_67044218_-	SINE	Alu	AluSz6
CAediting_643983	chr8_67044224_-	SINE	Alu	AluSz6
CAediting_643984	chr8_67044225_-	SINE	Alu	AluSz6
CAediting_643985	chr8_67044226_-	SINE	Alu	AluSz6
CAediting_643986	chr8_67044235_-	SINE	Alu	AluSz6
CAediting_643987	chr8_67044240_-	SINE	Alu	AluSz6
CAediting_643988	chr8_67044241_-	SINE	Alu	AluSz6
CAediting_643989	chr8_67044242_-	SINE	Alu	AluSz6
CAediting_643990	chr8_67044243_-	SINE	Alu	AluSz6
CAediting_643991	chr8_67044248_-	SINE	Alu	AluSz6
CAediting_643992	chr8_67044250_-	SINE	Alu	AluSz6
CAediting_643993	chr8_67044260_-	SINE	Alu	AluSz6
CAediting_643994	chr8_67044263_-	SINE	Alu	AluSz6
CAediting_643995	chr8_67044264_-	SINE	Alu	AluSz6
CAediting_643996	chr8_67044273_-	SINE	Alu	AluSz6
CAediting_643997	chr8_67044274_-	SINE	Alu	AluSz6
CAediting_643998	chr8_67044293_-	SINE	Alu	AluSz6
CAediting_643999	chr8_67044297_-	SINE	Alu	AluSz6
CAediting_644000	chr8_67044298_-	SINE	Alu	AluSz6
CAediting_644001	chr8_67044303_-	SINE	Alu	AluSz6
CAediting_644002	chr8_67044319_-	SINE	Alu	AluSz6
CAediting_644003	chr8_67044320_-	SINE	Alu	AluSz6
CAediting_644004	chr8_67044322_-	SINE	Alu	AluSz6
CAediting_644005	chr8_67044328_-	SINE	Alu	AluSz6
CAediting_644006	chr8_67044332_-	SINE	Alu	AluSz6
CAediting_644007	chr8_67044338_-	SINE	Alu	AluSz6
CAediting_644008	chr8_67044598_-	SINE	Alu	AluSq2
CAediting_644009	chr8_67044602_-	SINE	Alu	AluSq2
CAediting_644010	chr8_67044604_-	SINE	Alu	AluSq2
CAediting_644011	chr8_67044605_-	SINE	Alu	AluSq2
CAediting_644012	chr8_67044626_-	SINE	Alu	AluSq2
CAediting_644013	chr8_67044627_-	SINE	Alu	AluSq2
CAediting_644014	chr8_67044632_-	SINE	Alu	AluSq2
CAediting_644015	chr8_67044634_-	SINE	Alu	AluSq2
CAediting_644016	chr8_67044638_-	SINE	Alu	AluSq2
CAediting_644017	chr8_67044665_-	SINE	Alu	AluSq2
CAediting_644018	chr8_67044668_-	SINE	Alu	AluSq2
CAediting_644019	chr8_67044672_-	SINE	Alu	AluSq2
CAediting_644020	chr8_67044676_-	SINE	Alu	AluSq2
CAediting_644021	chr8_67044683_-	SINE	Alu	AluSq2
CAediting_644022	chr8_67044689_-	SINE	Alu	AluSq2
CAediting_644023	chr8_67044692_-	SINE	Alu	AluSq2
CAediting_644024	chr8_67044702_-	SINE	Alu	AluSq2
CAediting_644025	chr8_67044708_-	SINE	Alu	AluSq2
CAediting_644026	chr8_67044709_-	SINE	Alu	AluSq2
CAediting_644027	chr8_67044711_-	SINE	Alu	AluSq2
CAediting_644028	chr8_67044721_-	SINE	Alu	AluSq2
CAediting_644029	chr8_67044724_-	SINE	Alu	AluSq2
CAediting_644030	chr8_67044728_-	SINE	Alu	AluSq2
CAediting_644031	chr8_67044732_-	SINE	Alu	AluSq2
CAediting_644032	chr8_67044737_-	SINE	Alu	AluSq2
CAediting_644033	chr8_67044738_-	SINE	Alu	AluSq2
CAediting_644034	chr8_67044744_-	SINE	Alu	AluSq2
CAediting_644035	chr8_67044763_-	SINE	Alu	AluSq2
CAediting_644036	chr8_67044764_-	SINE	Alu	AluSq2
CAediting_644037	chr8_67044767_-	SINE	Alu	AluSq2
CAediting_644038	chr8_67044769_-	SINE	Alu	AluSq2
CAediting_644039	chr8_67044773_-	SINE	Alu	AluSq2
CAediting_644040	chr8_67044776_-	SINE	Alu	AluSq2
CAediting_644041	chr8_67044778_-	SINE	Alu	AluSq2
CAediting_644042	chr8_67044779_-	SINE	Alu	AluSq2
CAediting_644043	chr8_67044782_-	SINE	Alu	AluSq2
CAediting_644044	chr8_67044793_-	SINE	Alu	AluSq2
CAediting_644045	chr8_67044794_-	SINE	Alu	AluSq2
CAediting_644046	chr8_67044795_-	SINE	Alu	AluSq2
CAediting_644047	chr8_67044803_-	SINE	Alu	AluSq2
CAediting_644048	chr8_67044804_-	SINE	Alu	AluSq2
CAediting_644049	chr8_67044813_-	SINE	Alu	AluSq2
CAediting_644050	chr8_67044818_-	SINE	Alu	AluSq2
CAediting_644051	chr8_67044819_-	SINE	Alu	AluSq2
CAediting_644052	chr8_67044824_-	SINE	Alu	AluSq2
CAediting_644053	chr8_67044827_-	SINE	Alu	AluSq2
CAediting_644054	chr8_67044830_-	SINE	Alu	AluSq2
CAediting_644055	chr8_67044832_-	SINE	Alu	AluSq2
CAediting_644056	chr8_67044837_-	SINE	Alu	AluSq2
CAediting_644057	chr8_67044840_-	SINE	Alu	AluSq2
CAediting_644058	chr8_67044842_-	SINE	Alu	AluSq2
CAediting_644059	chr8_67044846_-	SINE	Alu	AluSq2
CAediting_644060	chr8_67044850_-	SINE	Alu	AluSq2
CAediting_644061	chr8_67044864_-	SINE	Alu	AluSq2
CAediting_644062	chr8_67044872_-	SINE	Alu	AluSq2
CAediting_644063	chr8_67044873_-	SINE	Alu	AluSq2
CAediting_644064	chr8_67044881_-	SINE	Alu	AluSq2
CAediting_644065	chr8_67044889_-	SINE	Alu	AluSq2
CAediting_644066	chr8_67044891_-	SINE	Alu	AluSq2
CAediting_644068	chr8_67045189_-	SINE	Alu	AluSx1
CAediting_644069	chr8_67045207_-	SINE	Alu	AluSx1
CAediting_644070	chr8_67045222_-	SINE	Alu	AluSx1
CAediting_644071	chr8_67045230_-	SINE	Alu	AluSx1
CAediting_644072	chr8_67045235_-	SINE	Alu	AluSx1
CAediting_644073	chr8_67045247_-	SINE	Alu	AluSx1
CAediting_644074	chr8_67045248_-	SINE	Alu	AluSx1
CAediting_644075	chr8_67045272_-	SINE	Alu	AluSx1
CAediting_644076	chr8_67045284_-	SINE	Alu	AluSx1
CAediting_644077	chr8_67045286_-	SINE	Alu	AluSx1
CAediting_644078	chr8_67045295_-	SINE	Alu	AluSx1
CAediting_644079	chr8_67045305_-	SINE	Alu	AluSx1
CAediting_644080	chr8_67045306_-	SINE	Alu	AluSx1
CAediting_644081	chr8_67045326_-	SINE	Alu	AluSx1
CAediting_644082	chr8_67045330_-	SINE	Alu	AluSx1
CAediting_644083	chr8_67045332_-	SINE	Alu	AluSx1
CAediting_644084	chr8_67045334_-	SINE	Alu	AluSx1
CAediting_644085	chr8_67045341_-	SINE	Alu	AluSx1
CAediting_644086	chr8_67045342_-	SINE	Alu	AluSx1
CAediting_644087	chr8_67045345_-	SINE	Alu	AluSx1
CAediting_644088	chr8_67045346_-	SINE	Alu	AluSx1
CAediting_644089	chr8_67045367_-	SINE	Alu	AluSx1
CAediting_644090	chr8_67045371_-	SINE	Alu	AluSx1
CAediting_644091	chr8_67045372_-	SINE	Alu	AluSx1
CAediting_644092	chr8_67045391_-	SINE	Alu	AluSx1
CAediting_644093	chr8_67045407_-	SINE	Alu	AluSx1
CAediting_644094	chr8_67045410_-	SINE	Alu	AluSx1
CAediting_644095	chr8_67045415_-	SINE	Alu	AluSx1
CAediting_644096	chr8_67045445_-	SINE	Alu	AluSx1
CAediting_644097	chr8_67045448_-	SINE	Alu	AluSx1
CAediting_644098	chr8_67045450_-	SINE	Alu	AluSx1
CAediting_644099	chr8_67049388_-	SINE	Alu	AluJb
CAediting_644100	chr8_67049395_-	SINE	Alu	AluJb
CAediting_644101	chr8_67050274_-	SINE	Alu	AluYe6
CAediting_644102	chr8_67052447_-	SINE	Alu	AluSx1
CAediting_644103	chr8_67052490_-	SINE	Alu	AluSx1
CAediting_644104	chr8_67052757_-	SINE	Alu	AluSq
CAediting_644105	chr8_67053153_-	SINE	Alu	AluSx1
CAediting_644106	chr8_67056383_-	SINE	Alu	AluJr
CAediting_644107	chr8_67056418_-	SINE	Alu	AluJr
CAediting_644108	chr8_67056450_-	SINE	Alu	AluJr

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RNA A-to-I editing events in the alternative splicing sites for PPP1R42

RNA A-to-I editing(s) in the alternative splicing sites.

AStype	CAeditomID	Editing position	AS position	AS direction	Exonic location	Wildtype sequence	Wildtype splicing strength	RNA edited sequence	RNA edited splicing strength
ES	CAediting_643950	chr8_67027038_-	67027029:67027051	3SS	0+7i	GTGCATGCCTGTAATCCCAGCTG	1.49	GTGCATGCCTGTAGTCCCAGCTG	-3.1
MEX_2	CAediting_643950	chr8_67027038_-	67027029:67027051	3SS	0+7i	GTGCATGCCTGTAATCCCAGCTG	1.49	GTGCATGCCTGTAGTCCCAGCTG	-3.1
ES	CAediting_643951	chr8_67027061_-	67027061:67027083	3SS	3+0i	ACTAAAAATACAAAAATTAGCCA	-4.26	ACTAAAAATACAAAAATTAGCCG	-4.19
MEX_2	CAediting_643951	chr8_67027061_-	67027061:67027083	3SS	3+0i	ACTAAAAATACAAAAATTAGCCA	-4.26	ACTAAAAATACAAAAATTAGCCG	-4.19

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000178125.13.PPP1R42.

Correlation between RNA A-to-I editing and PSI for ENSG00000178125.13.PPP1R42.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for PPP1R42

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for PPP1R42

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for PPP1R42

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_396018	chr5_1062918_-	ENSG00000178125.13	ENST00000522909	hsa-miR-4635	66964210	66964216	7mer-m8	66964209	66964228	148	-13.04

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for PPP1R42

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST	ENST type	RNA structure without RNA A-to-I editing.	RNA structure with RNA A-to-I editing.
ENST00000523545.1	processed_transcript

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID	ENST	Editing_Position	MFE_withoneAI	MFE_withoutAI	MFE_withmultipleAI
CAediting_643949	ENST00000523545.1	chr8_67026990_-	-95.80	-95.30	-95.80

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Relation with ADAR for PPP1R42

Correlation between ADAR gene expression and RNA editing frequency

Cancer	CAeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
BRCA	CAediting_643964	chr8_67044145_-	0.00672593140736006	0.123547275743182	.	.	.	.
COAD	CAediting_643964	chr8_67044145_-	0.00363159264006666	0.38240036737146	.	.	.	.
KIRP	CAediting_643964	chr8_67044145_-	0.0105411321347608	0.348526650965708	.	.	.	.
TGCT	CAediting_643971	chr8_67044167_-	0.0212023062054548	0.262280993952728	.	.	.	.
THYM	CAediting_643971	chr8_67044167_-	.	.	0.0221389376637809	0.302610518887925	.	.
BLCA	CAediting_643972	chr8_67044171_-	.	.	0.0217643128913831	0.279950393040448	.	.
LUAD	CAediting_644004	chr8_67044322_-	0.0298112314222786	0.280718925217058	.	.	.	.
BRCA	CAediting_644013	chr8_67044627_-	0.0416975410794038	0.222740896465684	.	.	.	.
ESCA	CAediting_644027	chr8_67044711_-	.	.	0.0426223134064528	0.285038949777681	.	.

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Relation with cancer stages for PPP1R42

Correlation between Cancer stages and RNA editing frequency

Cancer	Stage_type	CAeditomID	position	P-val	Coeff.
BRCA	pathologic_stage	CAediting_644013	chr8_67044627_-	0.0184530558465105	-0.25816268463566
ESCA	clinical_stage	CAediting_643964	chr8_67044145_-	0.0386612069666942	-0.477553973451082
ESCA	pathologic_stage	CAediting_644023	chr8_67044692_-	0.0429032081765536	0.250021115968249
LUSC	pathologic_stage	CAediting_643964	chr8_67044145_-	0.0285663510369035	0.212737120750532

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Relation with survival for PPP1R42

Correlation between RNA editing and survival

Cancer	CAeditomID	position	KMpvalue	Coxpvalue	CoxHR
BRCA	CAediting_643971	chr8_67044167_-	0.0299382040183629	0.0191475	7.23556
CESC	CAediting_643964	chr8_67044145_-	0.0110079871961291	0.00722667	9.36507e-07

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RelatedDrugs for PPP1R42

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for PPP1R42

Diseases associated with this gene.
(DisGeNet 7.0)

Gene

Disease ID

Disease name

# pubmeds

Source

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene