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Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with cancer stages

Soverview

Relation with survival state

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene

Editing gene: TCAIM (CAeditome ID:285343)

Gene summary for TCAIM

check button Gene summary
Gene informationGene symbol

TCAIM

Gene ID

285343

Gene nameT cell activation inhibitor, mitochondrial
SynonymsC3orf23|TOAG-1|TOAG1
Cytomap

3p21.31

Type of geneprotein-coding
DescriptionT-cell activation inhibitor, mitochondrialtolerance associated gene-1 protein
Modification date20210518
UniProtAcc

Q8N3R3

Context

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID
TCAIM

GO:0005739

T-cell activation inhibitor, mitochondrial

0000054


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RNA A-to-I events for TCAIM

check buttonRNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.
all structure

check button RNA editing frequencies across 33 cancers of gene: ENSG00000179152.17
boxplot

check button RNA A-to-I editing events in Cancer.
CAediting_270358(44342873, +), CAediting_270359(44343016, +), CAediting_270360(44344091, +), CAediting_270361(44344096, +), CAediting_270362(44344108, +), CAediting_270363(44344195, +), CAediting_270364(44353201, +), CAediting_270365(44359114, +), CAediting_270366(44359130, +), CAediting_270367(44359140, +), CAediting_270368(44359143, +), CAediting_270369(44359153, +), CAediting_270370(44359166, +), CAediting_270371(44363860, +), CAediting_270372(44364512, +), CAediting_270373(44364559, +), CAediting_270374(44364562, +), CAediting_270375(44364563, +), CAediting_270376(44364644, +), CAediting_270377(44364662, +), CAediting_270378(44364667, +), CAediting_270379(44365429, +), CAediting_270380(44365446, +), CAediting_270381(44365458, +), CAediting_270382(44365494, +), CAediting_270383(44365525, +), CAediting_270384(44365590, +), CAediting_270385(44368767, +), CAediting_270386(44368768, +), CAediting_270387(44368773, +), CAediting_270388(44368784, +), CAediting_270389(44368797, +), CAediting_270390(44368821, +), CAediting_270391(44368822, +), CAediting_270392(44368823, +), CAediting_270393(44368827, +), CAediting_270394(44368841, +), CAediting_270395(44368863, +), CAediting_270396(44368902, +), CAediting_270397(44368924, +), CAediting_270398(44368925, +), CAediting_270399(44368929, +), CAediting_270400(44368933, +), CAediting_270401(44368969, +), CAediting_270402(44369007, +), CAediting_270403(44370245, +), CAediting_270404(44370811, +), CAediting_270405(44370841, +), CAediting_270406(44370842, +), CAediting_270407(44371010, +), CAediting_270408(44371011, +), CAediting_270409(44371027, +), CAediting_270410(44371036, +), CAediting_270411(44371092, +), CAediting_270412(44371109, +), CAediting_270413(44371112, +), CAediting_270414(44371133, +), CAediting_270415(44371159, +), CAediting_270416(44371238, +), CAediting_270417(44371241, +), CAediting_270418(44371247, +), CAediting_270419(44371248, +), CAediting_270420(44371255, +), CAediting_270421(44371278, +), CAediting_270422(44371279, +), CAediting_270423(44371287, +), CAediting_270424(44371293, +), CAediting_270425(44371310, +), CAediting_270426(44371332, +), CAediting_270427(44372629, +), CAediting_270428(44372855, +), CAediting_270429(44372856, +), CAediting_270430(44372870, +), CAediting_270431(44373372, +), CAediting_270432(44373383, +), CAediting_270433(44373388, +), CAediting_270434(44373410, +), CAediting_270435(44373411, +), CAediting_270436(44373428, +), CAediting_270437(44373441, +), CAediting_270438(44373457, +), CAediting_270439(44373469, +), CAediting_270440(44373496, +), CAediting_270441(44373501, +), CAediting_270442(44373502, +), CAediting_270443(44373503, +), CAediting_270444(44373525, +), CAediting_270445(44373533, +), CAediting_270446(44373539, +), CAediting_270447(44373543, +), CAediting_270448(44373556, +), CAediting_270449(44373560, +), CAediting_270450(44373586, +), CAediting_270451(44373600, +), CAediting_270452(44373603, +), CAediting_270453(44373604, +), CAediting_270454(44373658, +), CAediting_270455(44374462, +), CAediting_270456(44374464, +), CAediting_270457(44374478, +), CAediting_270458(44374498, +), CAediting_270459(44374500, +), CAediting_270460(44374506, +), CAediting_270461(44374522, +), CAediting_270462(44374541, +), CAediting_270463(44374554, +), CAediting_270464(44374555, +), CAediting_270465(44374560, +), CAediting_270466(44374577, +), CAediting_270467(44374606, +), CAediting_270468(44374610, +), CAediting_270469(44374614, +), CAediting_270470(44374618, +), CAediting_270471(44374630, +), CAediting_270472(44374640, +), CAediting_270473(44374650, +), CAediting_270474(44374663, +), CAediting_270475(44374667, +), CAediting_270476(44374686, +), CAediting_270477(44374695, +), CAediting_270478(44374716, +), CAediting_270479(44383717, +), CAediting_270480(44383718, +), CAediting_270481(44383744, +), CAediting_270482(44398794, +), CAediting_270483(44398823, +), CAediting_270484(44398845, +), CAediting_270485(44407903, +), CAediting_270486(44407908, +), CAediting_270487(44407911, +), CAediting_270488(44407927, +), CAediting_270489(44407954, +), CAediting_270490(44407989, +),

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RNA editing positional annotations for TCAIM using Annovar

check button Protein coding RNA editing(s).
CAeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred

check button Gene structure information of RNA editing(s).
CAeditome IDPositionVariant type
CAediting_270358chr3_44342873_+ncRNA_intronic
CAediting_270359chr3_44343016_+ncRNA_intronic
CAediting_270360chr3_44344091_+ncRNA_intronic
CAediting_270361chr3_44344096_+ncRNA_intronic
CAediting_270362chr3_44344108_+ncRNA_intronic
CAediting_270363chr3_44344195_+ncRNA_intronic
CAediting_270364chr3_44353201_+ncRNA_intronic
CAediting_270365chr3_44359114_+ncRNA_intronic
CAediting_270366chr3_44359130_+ncRNA_intronic
CAediting_270367chr3_44359140_+ncRNA_intronic
CAediting_270368chr3_44359143_+ncRNA_intronic
CAediting_270369chr3_44359153_+ncRNA_intronic
CAediting_270370chr3_44359166_+ncRNA_intronic
CAediting_270371chr3_44363860_+ncRNA_intronic
CAediting_270372chr3_44364512_+ncRNA_intronic
CAediting_270373chr3_44364559_+ncRNA_intronic
CAediting_270374chr3_44364562_+ncRNA_intronic
CAediting_270375chr3_44364563_+ncRNA_intronic
CAediting_270376chr3_44364644_+ncRNA_intronic
CAediting_270377chr3_44364662_+ncRNA_intronic
CAediting_270378chr3_44364667_+ncRNA_intronic
CAediting_270379chr3_44365429_+ncRNA_intronic
CAediting_270380chr3_44365446_+ncRNA_intronic
CAediting_270381chr3_44365458_+ncRNA_intronic
CAediting_270382chr3_44365494_+ncRNA_intronic
CAediting_270383chr3_44365525_+ncRNA_intronic
CAediting_270384chr3_44365590_+ncRNA_intronic
CAediting_270385chr3_44368767_+intronic
CAediting_270386chr3_44368768_+intronic
CAediting_270387chr3_44368773_+intronic
CAediting_270388chr3_44368784_+intronic
CAediting_270389chr3_44368797_+intronic
CAediting_270390chr3_44368821_+intronic
CAediting_270391chr3_44368822_+intronic
CAediting_270392chr3_44368823_+intronic
CAediting_270393chr3_44368827_+intronic
CAediting_270394chr3_44368841_+intronic
CAediting_270395chr3_44368863_+intronic
CAediting_270396chr3_44368902_+intronic
CAediting_270397chr3_44368924_+intronic
CAediting_270398chr3_44368925_+intronic
CAediting_270399chr3_44368929_+intronic
CAediting_270400chr3_44368933_+intronic
CAediting_270401chr3_44368969_+intronic
CAediting_270402chr3_44369007_+intronic
CAediting_270403chr3_44370245_+intronic
CAediting_270404chr3_44370811_+intronic
CAediting_270405chr3_44370841_+intronic
CAediting_270406chr3_44370842_+intronic
CAediting_270407chr3_44371010_+intronic
CAediting_270408chr3_44371011_+intronic
CAediting_270409chr3_44371027_+intronic
CAediting_270410chr3_44371036_+intronic
CAediting_270411chr3_44371092_+intronic
CAediting_270412chr3_44371109_+intronic
CAediting_270413chr3_44371112_+intronic
CAediting_270414chr3_44371133_+intronic
CAediting_270415chr3_44371159_+intronic
CAediting_270416chr3_44371238_+intronic
CAediting_270417chr3_44371241_+intronic
CAediting_270418chr3_44371247_+intronic
CAediting_270419chr3_44371248_+intronic
CAediting_270420chr3_44371255_+intronic
CAediting_270421chr3_44371278_+intronic
CAediting_270422chr3_44371279_+intronic
CAediting_270423chr3_44371287_+intronic
CAediting_270424chr3_44371293_+intronic
CAediting_270425chr3_44371310_+intronic
CAediting_270426chr3_44371332_+intronic
CAediting_270427chr3_44372629_+intronic
CAediting_270428chr3_44372855_+intronic
CAediting_270429chr3_44372856_+intronic
CAediting_270430chr3_44372870_+intronic
CAediting_270431chr3_44373372_+intronic
CAediting_270432chr3_44373383_+intronic
CAediting_270433chr3_44373388_+intronic
CAediting_270434chr3_44373410_+intronic
CAediting_270435chr3_44373411_+intronic
CAediting_270436chr3_44373428_+intronic
CAediting_270437chr3_44373441_+intronic
CAediting_270438chr3_44373457_+intronic
CAediting_270439chr3_44373469_+intronic
CAediting_270440chr3_44373496_+intronic
CAediting_270441chr3_44373501_+intronic
CAediting_270442chr3_44373502_+intronic
CAediting_270443chr3_44373503_+intronic
CAediting_270444chr3_44373525_+intronic
CAediting_270445chr3_44373533_+intronic
CAediting_270446chr3_44373539_+intronic
CAediting_270447chr3_44373543_+intronic
CAediting_270448chr3_44373556_+intronic
CAediting_270449chr3_44373560_+intronic
CAediting_270450chr3_44373586_+intronic
CAediting_270451chr3_44373600_+intronic
CAediting_270452chr3_44373603_+intronic
CAediting_270453chr3_44373604_+intronic
CAediting_270454chr3_44373658_+intronic
CAediting_270455chr3_44374462_+intronic
CAediting_270456chr3_44374464_+intronic
CAediting_270457chr3_44374478_+intronic
CAediting_270458chr3_44374498_+intronic
CAediting_270459chr3_44374500_+intronic
CAediting_270460chr3_44374506_+intronic
CAediting_270461chr3_44374522_+intronic
CAediting_270462chr3_44374541_+intronic
CAediting_270463chr3_44374554_+intronic
CAediting_270464chr3_44374555_+intronic
CAediting_270465chr3_44374560_+intronic
CAediting_270466chr3_44374577_+intronic
CAediting_270467chr3_44374606_+intronic
CAediting_270468chr3_44374610_+intronic
CAediting_270469chr3_44374614_+intronic
CAediting_270470chr3_44374618_+intronic
CAediting_270471chr3_44374630_+intronic
CAediting_270472chr3_44374640_+intronic
CAediting_270473chr3_44374650_+intronic
CAediting_270474chr3_44374663_+intronic
CAediting_270475chr3_44374667_+intronic
CAediting_270476chr3_44374686_+intronic
CAediting_270477chr3_44374695_+intronic
CAediting_270478chr3_44374716_+intronic
CAediting_270479chr3_44383717_+intronic
CAediting_270480chr3_44383718_+intronic
CAediting_270481chr3_44383744_+intronic
CAediting_270482chr3_44398794_+ncRNA_intronic
CAediting_270483chr3_44398823_+ncRNA_intronic
CAediting_270484chr3_44398845_+ncRNA_intronic
CAediting_270485chr3_44407903_+UTR3
CAediting_270486chr3_44407908_+UTR3
CAediting_270487chr3_44407911_+UTR3
CAediting_270488chr3_44407927_+UTR3
CAediting_270489chr3_44407954_+UTR3
CAediting_270490chr3_44407989_+UTR3

check button Repat-regional RNA editing(s).
CAeditome IDPositionRepeat familyRepeat sub familyRepeat name
CAediting_270358chr3_44342873_+SINEAluAluSx1
CAediting_270359chr3_44343016_+SINEAluAluSx1
CAediting_270360chr3_44344091_+SINEAluAluSz6
CAediting_270361chr3_44344096_+SINEAluAluSz6
CAediting_270362chr3_44344108_+SINEAluAluSz6
CAediting_270363chr3_44344195_+SINEAluAluSz6
CAediting_270364chr3_44353201_+SINEAluAluSq2
CAediting_270365chr3_44359114_+SINEAluFLAM_A
CAediting_270366chr3_44359130_+SINEAluFLAM_A
CAediting_270367chr3_44359140_+SINEAluFLAM_A
CAediting_270368chr3_44359143_+SINEAluFLAM_A
CAediting_270369chr3_44359153_+SINEAluFLAM_A
CAediting_270370chr3_44359166_+SINEAluFLAM_A
CAediting_270371chr3_44363860_+SINEAluAluJo
CAediting_270372chr3_44364512_+SINEAluAluSz6
CAediting_270373chr3_44364559_+SINEAluAluSz6
CAediting_270374chr3_44364562_+SINEAluAluSz6
CAediting_270375chr3_44364563_+SINEAluAluSz6
CAediting_270376chr3_44364644_+SINEAluAluSz6
CAediting_270377chr3_44364662_+SINEAluAluSz6
CAediting_270378chr3_44364667_+SINEAluAluSz6
CAediting_270379chr3_44365429_+SINEAluAluSz
CAediting_270380chr3_44365446_+SINEAluAluSz
CAediting_270381chr3_44365458_+SINEAluAluSz
CAediting_270382chr3_44365494_+SINEAluAluSz
CAediting_270383chr3_44365525_+SINEAluAluSz
CAediting_270384chr3_44365590_+SINEAluAluSz
CAediting_270385chr3_44368767_+SINEAluAluJo
CAediting_270386chr3_44368768_+SINEAluAluJo
CAediting_270387chr3_44368773_+SINEAluAluJo
CAediting_270388chr3_44368784_+SINEAluAluJo
CAediting_270389chr3_44368797_+SINEAluAluJo
CAediting_270390chr3_44368821_+SINEAluAluJo
CAediting_270391chr3_44368822_+SINEAluAluJo
CAediting_270392chr3_44368823_+SINEAluAluJo
CAediting_270393chr3_44368827_+SINEAluAluJo
CAediting_270394chr3_44368841_+SINEAluAluJo
CAediting_270395chr3_44368863_+SINEAluAluJo
CAediting_270396chr3_44368902_+SINEAluAluJo
CAediting_270397chr3_44368924_+SINEAluAluJo
CAediting_270398chr3_44368925_+SINEAluAluJo
CAediting_270399chr3_44368929_+SINEAluAluJo
CAediting_270400chr3_44368933_+SINEAluAluJo
CAediting_270401chr3_44368969_+SINEAluAluJo
CAediting_270402chr3_44369007_+SINEAluAluJo
CAediting_270403chr3_44370245_+SINEAluAluSc8
CAediting_270404chr3_44370811_+SINEAluAluJo
CAediting_270405chr3_44370841_+SINEAluAluJo
CAediting_270406chr3_44370842_+SINEAluAluJo
CAediting_270407chr3_44371010_+SINEAluAluSx
CAediting_270408chr3_44371011_+SINEAluAluSx
CAediting_270409chr3_44371027_+SINEAluAluSx
CAediting_270410chr3_44371036_+SINEAluAluSx
CAediting_270411chr3_44371092_+SINEAluAluSx
CAediting_270412chr3_44371109_+SINEAluAluSx
CAediting_270413chr3_44371112_+SINEAluAluSx
CAediting_270414chr3_44371133_+SINEAluAluSx
CAediting_270415chr3_44371159_+SINEAluAluSx
CAediting_270416chr3_44371238_+SINEAluAluJo
CAediting_270417chr3_44371241_+SINEAluAluJo
CAediting_270418chr3_44371247_+SINEAluAluJo
CAediting_270419chr3_44371248_+SINEAluAluJo
CAediting_270420chr3_44371255_+SINEAluAluJo
CAediting_270421chr3_44371278_+SINEAluAluJo
CAediting_270422chr3_44371279_+SINEAluAluJo
CAediting_270423chr3_44371287_+SINEAluAluJo
CAediting_270424chr3_44371293_+SINEAluAluJo
CAediting_270425chr3_44371310_+SINEAluAluJo
CAediting_270426chr3_44371332_+SINEAluAluJo
CAediting_270427chr3_44372629_+SINEAluAluY
CAediting_270428chr3_44372855_+SINEAluAluY
CAediting_270429chr3_44372856_+SINEAluAluY
CAediting_270430chr3_44372870_+SINEAluAluY
CAediting_270433chr3_44373388_+SINEAluAluSz
CAediting_270434chr3_44373410_+SINEAluAluSz
CAediting_270435chr3_44373411_+SINEAluAluSz
CAediting_270436chr3_44373428_+SINEAluAluSz
CAediting_270437chr3_44373441_+SINEAluAluSz
CAediting_270438chr3_44373457_+SINEAluAluSz
CAediting_270439chr3_44373469_+SINEAluAluSz
CAediting_270440chr3_44373496_+SINEAluAluSz
CAediting_270441chr3_44373501_+SINEAluAluSz
CAediting_270442chr3_44373502_+SINEAluAluSz
CAediting_270443chr3_44373503_+SINEAluAluSz
CAediting_270444chr3_44373525_+SINEAluAluSz
CAediting_270445chr3_44373533_+SINEAluAluSz
CAediting_270446chr3_44373539_+SINEAluAluSz
CAediting_270447chr3_44373543_+SINEAluAluSz
CAediting_270448chr3_44373556_+SINEAluAluSz
CAediting_270449chr3_44373560_+SINEAluAluSz
CAediting_270450chr3_44373586_+SINEAluAluSz
CAediting_270451chr3_44373600_+SINEAluAluSz
CAediting_270452chr3_44373603_+SINEAluAluSz
CAediting_270453chr3_44373604_+SINEAluAluSz
CAediting_270454chr3_44373658_+SINEAluAluSz
CAediting_270455chr3_44374462_+DNAhAT-CharlieMER112
CAediting_270456chr3_44374464_+DNAhAT-CharlieMER112
CAediting_270457chr3_44374478_+SINEAluAluJr
CAediting_270458chr3_44374498_+SINEAluAluJr
CAediting_270459chr3_44374500_+SINEAluAluJr
CAediting_270460chr3_44374506_+SINEAluAluJr
CAediting_270461chr3_44374522_+SINEAluAluJr
CAediting_270462chr3_44374541_+SINEAluAluJr
CAediting_270463chr3_44374554_+SINEAluAluJr
CAediting_270464chr3_44374555_+SINEAluAluJr
CAediting_270465chr3_44374560_+SINEAluAluJr
CAediting_270466chr3_44374577_+SINEAluAluJr
CAediting_270467chr3_44374606_+SINEAluAluJr
CAediting_270468chr3_44374610_+SINEAluAluJr
CAediting_270469chr3_44374614_+SINEAluAluJr
CAediting_270470chr3_44374618_+SINEAluAluJr
CAediting_270471chr3_44374630_+SINEAluAluJr
CAediting_270472chr3_44374640_+SINEAluAluJr
CAediting_270473chr3_44374650_+SINEAluAluJr
CAediting_270474chr3_44374663_+SINEAluAluJr
CAediting_270475chr3_44374667_+SINEAluAluJr
CAediting_270476chr3_44374686_+SINEAluAluJr
CAediting_270477chr3_44374695_+SINEAluAluJr
CAediting_270478chr3_44374716_+SINEAluAluJr
CAediting_270479chr3_44383717_+SINEAluAluJo
CAediting_270480chr3_44383718_+SINEAluAluJo
CAediting_270481chr3_44383744_+SINEAluAluJo
CAediting_270482chr3_44398794_+LINEL1L1MD2
CAediting_270483chr3_44398823_+LINEL1L1MD2
CAediting_270484chr3_44398845_+LINEL1L1MD2
CAediting_270485chr3_44407903_+SINEAluAluJb
CAediting_270486chr3_44407908_+SINEAluAluJb
CAediting_270487chr3_44407911_+SINEAluAluJb
CAediting_270488chr3_44407927_+SINEAluAluJb
CAediting_270489chr3_44407954_+SINEAluAluJb
CAediting_270490chr3_44407989_+SINEAluAluJb

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RNA A-to-I editing events in the alternative splicing sites for TCAIM

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeCAeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength

check button Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000179152.17.TCAIM.

check button Correlation between RNA A-to-I editing and PSI for ENSG00000179152.17.TCAIM.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for TCAIM

check button Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

check button Correlation between RNA A-to-I editing and gene expression.

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for TCAIM

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.


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The effects of the RNA editing to the miRNA binding sites for TCAIM

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_270366chr3_44359130_+ENSG00000179152.17ENST00000383746hsa-miR-140-3p44359125443591317mer-m84435911144359132157.00-22.25
CAediting_270366chr3_44359130_+ENSG00000179152.17ENST00000396078hsa-miR-140-3p44359125443591317mer-m84435911144359132157.00-22.25
CAediting_270369chr3_44359153_+ENSG00000179152.17ENST00000383746hsa-miR-18a-3p44359152443591576mer4435913844359158143.00-25.59
CAediting_270369chr3_44359153_+ENSG00000179152.17ENST00000383746hsa-miR-191344359151443591577mer-m84435913844359158149.00-24.40
CAediting_270369chr3_44359153_+ENSG00000179152.17ENST00000383746hsa-miR-6849-3p44359146443591527mer-m84435913244359153140.00-16.11
CAediting_270369chr3_44359153_+ENSG00000179152.17ENST00000396078hsa-miR-18a-3p44359152443591576mer4435913844359158143.00-25.59
CAediting_270369chr3_44359153_+ENSG00000179152.17ENST00000396078hsa-miR-191344359151443591577mer-m84435913844359158149.00-24.40
CAediting_270369chr3_44359153_+ENSG00000179152.17ENST00000396078hsa-miR-6849-3p44359146443591527mer-m84435913244359153140.00-16.11
CAediting_270367chr3_44359140_+ENSG00000179152.17ENST00000383746hsa-miR-1207-3p44359133443591397mer-m84435912244359140145.00-13.53
CAediting_270367chr3_44359140_+ENSG00000179152.17ENST00000383746hsa-miR-4524a-5p44359136443591427mer-m84435912244359143146.00-12.87
CAediting_270367chr3_44359140_+ENSG00000179152.17ENST00000383746hsa-miR-4524b-5p44359136443591427mer-m84435912444359143144.00-10.53
CAediting_270367chr3_44359140_+ENSG00000179152.17ENST00000383746hsa-miR-503-5p44359136443591427mer-1a4435911744359142140.00-26.60
CAediting_270367chr3_44359140_+ENSG00000179152.17ENST00000383746hsa-miR-64644359135443591428mer-1a4435912344359142148.00-20.37
CAediting_270367chr3_44359140_+ENSG00000179152.17ENST00000396078hsa-miR-1207-3p44359133443591397mer-m84435912244359140145.00-13.53
CAediting_270367chr3_44359140_+ENSG00000179152.17ENST00000396078hsa-miR-4524a-5p44359136443591427mer-m84435912244359143146.00-12.87
CAediting_270367chr3_44359140_+ENSG00000179152.17ENST00000396078hsa-miR-4524b-5p44359136443591427mer-m84435912444359143144.00-10.53
CAediting_270367chr3_44359140_+ENSG00000179152.17ENST00000396078hsa-miR-503-5p44359136443591427mer-1a4435911744359142140.00-26.60
CAediting_270367chr3_44359140_+ENSG00000179152.17ENST00000396078hsa-miR-64644359135443591428mer-1a4435912344359142148.00-20.37
CAediting_270486chr3_44407908_+ENSG00000179152.17ENST00000412611hsa-miR-2116-3p44407905444079117mer-m84440789444407912143.00-25.77
CAediting_270486chr3_44407908_+ENSG00000179152.17ENST00000431657hsa-miR-2116-3p44407905444079117mer-m84440789444407912143.00-25.77
CAediting_270487chr3_44407911_+ENSG00000179152.17ENST00000412611hsa-miR-454-5p44407904444079107mer-m84440789144407911154.00-18.10
CAediting_270487chr3_44407911_+ENSG00000179152.17ENST00000431657hsa-miR-454-5p44407904444079107mer-m84440789144407911154.00-18.10
CAediting_270489chr3_44407954_+ENSG00000179152.17ENST00000412611hsa-miR-490-3p44407949444079557mer-m84440793444407956144.00-21.85
CAediting_270489chr3_44407954_+ENSG00000179152.17ENST00000412611hsa-miR-7851-3p44407948444079547mer-m84440793344407955146.00-21.23
CAediting_270489chr3_44407954_+ENSG00000179152.17ENST00000431657hsa-miR-490-3p44407949444079557mer-m84440793444407956144.00-21.85
CAediting_270489chr3_44407954_+ENSG00000179152.17ENST00000431657hsa-miR-7851-3p44407948444079547mer-m84440793344407955146.00-21.23
CAediting_270368chr3_44359143_+ENSG00000179152.17ENST00000383746hsa-miR-2355-5p44359140443591467mer-m84435912844359147149.00-19.41
CAediting_270368chr3_44359143_+ENSG00000179152.17ENST00000396078hsa-miR-2355-5p44359140443591467mer-m84435912844359147149.00-19.41

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_270367chr3_44359140_+ENSG00000179152.17ENST00000383746hsa-miR-32544359137443591437mer-m84435912144359144148-20.18
CAediting_270368chr3_44359143_+ENSG00000179152.17ENST00000383746hsa-miR-32544359137443591437mer-m84435912144359144148-20.18
CAediting_270370chr3_44359166_+ENSG00000179152.17ENST00000383746hsa-miR-446544359164443591707mer-m84435915044359171152-20.46
CAediting_270365chr3_44359114_+ENSG00000179152.17ENST00000383746hsa-miR-6872-3p44359110443591167mer-m84435909944359117155-21.04
CAediting_270365chr3_44359114_+ENSG00000179152.17ENST00000383746hsa-miR-874-3p44359107443591137mer-m84435909244359114141-16.13
CAediting_270367chr3_44359140_+ENSG00000179152.17ENST00000396078hsa-miR-32544359137443591437mer-m84435912144359144148-20.18
CAediting_270368chr3_44359143_+ENSG00000179152.17ENST00000396078hsa-miR-32544359137443591437mer-m84435912144359144148-20.18
CAediting_270370chr3_44359166_+ENSG00000179152.17ENST00000396078hsa-miR-446544359164443591707mer-m84435915044359171152-20.46
CAediting_270365chr3_44359114_+ENSG00000179152.17ENST00000396078hsa-miR-6872-3p44359110443591167mer-m84435909944359117155-21.04
CAediting_270365chr3_44359114_+ENSG00000179152.17ENST00000396078hsa-miR-874-3p44359107443591137mer-m84435909244359114141-16.13
CAediting_270488chr3_44407927_+ENSG00000179152.17ENST00000412611hsa-miR-10400-3p44407920444079267mer-m84440790644407927140-20.37
CAediting_270489chr3_44407954_+ENSG00000179152.17ENST00000412611hsa-miR-1298-3p44407948444079547mer-m84440793444407955153-21.38
CAediting_270488chr3_44407927_+ENSG00000179152.17ENST00000412611hsa-miR-1343-3p44407923444079297mer-m84440790944407930140-20.74
CAediting_270488chr3_44407927_+ENSG00000179152.17ENST00000412611hsa-miR-467444407920444079267mer-m84440790744407927147-22.8
CAediting_270490chr3_44407989_+ENSG00000179152.17ENST00000412611hsa-miR-6739-3p44407983444079897mer-m84440797044407990155-13.33
CAediting_270488chr3_44407927_+ENSG00000179152.17ENST00000412611hsa-miR-6783-3p44407923444079297mer-m84440790944407930151-25.03
CAediting_270488chr3_44407927_+ENSG00000179152.17ENST00000412611hsa-miR-939-3p44407922444079298mer-1a4440790744407929148-23.07
CAediting_270488chr3_44407927_+ENSG00000179152.17ENST00000431657hsa-miR-10400-3p44407920444079267mer-m84440790644407927140-20.37
CAediting_270489chr3_44407954_+ENSG00000179152.17ENST00000431657hsa-miR-1298-3p44407948444079547mer-m84440793444407955153-21.38
CAediting_270488chr3_44407927_+ENSG00000179152.17ENST00000431657hsa-miR-1343-3p44407923444079297mer-m84440790944407930140-20.74
CAediting_270488chr3_44407927_+ENSG00000179152.17ENST00000431657hsa-miR-467444407920444079267mer-m84440790744407927147-22.8
CAediting_270490chr3_44407989_+ENSG00000179152.17ENST00000431657hsa-miR-6739-3p44407983444079897mer-m84440797044407990155-13.33
CAediting_270488chr3_44407927_+ENSG00000179152.17ENST00000431657hsa-miR-6783-3p44407923444079297mer-m84440790944407930151-25.03
CAediting_270488chr3_44407927_+ENSG00000179152.17ENST00000431657hsa-miR-939-3p44407922444079298mer-1a4440790744407929148-23.07

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_748296chr10_51299626_+ENSG00000179152.17ENST00000412611hsa-miR-605-3p44407963444079697mer-m84440794844407970154-14.47
CAediting_980496chr14_31014685_-ENSG00000179152.17ENST00000412611hsa-miR-624-3p44408763444087697mer-m84440874944408770153-13.61
CAediting_393chr1_1167164_+ENSG00000179152.17ENST00000412611hsa-miR-200b-3p44407516444075227mer-m84440750144407523145-9.96
CAediting_748296chr10_51299626_+ENSG00000179152.17ENST00000431657hsa-miR-605-3p44407963444079697mer-m84440794844407970154-14.47
CAediting_980496chr14_31014685_-ENSG00000179152.17ENST00000431657hsa-miR-624-3p44408763444087697mer-m84440874944408770153-13.61
CAediting_393chr1_1167164_+ENSG00000179152.17ENST00000431657hsa-miR-200b-3p44407516444075227mer-m84440750144407523145-9.96
CAediting_228905chr2_188297554_+ENSG00000179152.17ENST00000383746hsa-miR-561-3p44359574443595807mer-m84435956044359581142-13.46
CAediting_228905chr2_188297554_+ENSG00000179152.17ENST00000396078hsa-miR-561-3p44359574443595807mer-m84435956044359581142-13.46
CAediting_117844chr1_162342605_+ENSG00000179152.17ENST00000412611hsa-miR-556-3p44408928444089347mer-m84440891544408935154-15.2
CAediting_580943chr7_100356700_+ENSG00000179152.17ENST00000431657hsa-miR-6840-3p44391277443912837mer-m84439126844391284141-27.37
CAediting_1229415chr17_67471547_+ENSG00000179152.17ENST00000431657hsa-miR-548aa44401090444010967mer-m84440107444401097148-14.46

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_393chr1_1167164_+ENSG00000179152.17ENST00000412611hsa-miR-200b-3p44407761444077688mer-1a4440774944407768144-9.58
CAediting_77128chr1_85133844_+ENSG00000179152.17ENST00000412611hsa-miR-4423-3p44409210444092178mer-1a4440919544409217146-12.42
CAediting_1229415chr17_67471547_+ENSG00000179152.17ENST00000431657hsa-miR-548aa44401170444011767mer-m84440115544401177154-16.14
CAediting_393chr1_1167164_+ENSG00000179152.17ENST00000431657hsa-miR-200b-3p44407761444077688mer-1a4440774944407768144-9.58

check button Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for TCAIM

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.
ENST00000342649.7protein_codingSoverviewSoverview
ENST00000383746.6protein_codingSoverviewSoverview
ENST00000396078.6protein_codingSoverviewSoverview
ENST00000412611.5nonsense_mediated_decaySoverviewSoverview
ENST00000431657.4nonsense_mediated_decaySoverviewSoverview

check button RNA A-to-I editing in RNA structures for Minimum free energy (MFE).
CAeditom_IDENSTEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI
CAediting_270485ENST00000342649.7chr3_44407903_+-1011.10-1011.00-1014.10
CAediting_270486ENST00000342649.7chr3_44407908_+-1009.70-1011.00-1014.10
CAediting_270487ENST00000342649.7chr3_44407911_+-1012.80-1011.00-1014.10
CAediting_270488ENST00000342649.7chr3_44407927_+-1011.00-1011.00-1014.10
CAediting_270489ENST00000342649.7chr3_44407954_+-1011.80-1011.00-1014.10
CAediting_270490ENST00000342649.7chr3_44407989_+-1011.10-1011.00-1014.10
CAediting_270365ENST00000383746.6chr3_44359114_+-542.90-543.10-551.30
CAediting_270366ENST00000383746.6chr3_44359130_+-544.10-543.10-551.30
CAediting_270367ENST00000383746.6chr3_44359140_+-546.70-543.10-551.30
CAediting_270368ENST00000383746.6chr3_44359143_+-544.20-543.10-551.30
CAediting_270369ENST00000383746.6chr3_44359153_+-550.00-543.10-551.30
CAediting_270370ENST00000383746.6chr3_44359166_+-543.90-543.10-551.30
CAediting_270365ENST00000396078.6chr3_44359114_+-667.60-667.80-676.00
CAediting_270366ENST00000396078.6chr3_44359130_+-668.80-667.80-676.00
CAediting_270367ENST00000396078.6chr3_44359140_+-671.40-667.80-676.00
CAediting_270368ENST00000396078.6chr3_44359143_+-668.90-667.80-676.00
CAediting_270369ENST00000396078.6chr3_44359153_+-674.70-667.80-676.00
CAediting_270370ENST00000396078.6chr3_44359166_+-668.60-667.80-676.00
CAediting_270485ENST00000412611.5chr3_44407903_+-811.90-811.80-814.00
CAediting_270486ENST00000412611.5chr3_44407908_+-810.50-811.80-814.00
CAediting_270487ENST00000412611.5chr3_44407911_+-813.60-811.80-814.00
CAediting_270488ENST00000412611.5chr3_44407927_+-811.80-811.80-814.00
CAediting_270489ENST00000412611.5chr3_44407954_+-812.60-811.80-814.00
CAediting_270490ENST00000412611.5chr3_44407989_+-811.90-811.80-814.00
CAediting_270485ENST00000431657.4chr3_44407903_+-930.90-924.50-937.50
CAediting_270486ENST00000431657.4chr3_44407908_+-923.20-924.50-937.50
CAediting_270487ENST00000431657.4chr3_44407911_+-923.70-924.50-937.50
CAediting_270488ENST00000431657.4chr3_44407927_+-930.70-924.50-937.50
CAediting_270489ENST00000431657.4chr3_44407954_+-923.90-924.50-937.50
CAediting_270490ENST00000431657.4chr3_44407989_+-927.60-924.50-937.50

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Relation with ADAR for TCAIM

check button Correlation between ADAR gene expression and RNA editing frequency
CancerCAeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)
LGGCAediting_270370chr3_44359166_+....0.03570894593136270.291967261945177
STADCAediting_270370chr3_44359166_+..2.81218511083925e-070.572127693029041..

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Relation with cancer stages for TCAIM

check button Correlation between Cancer stages and RNA editing frequency
CancerStage_typeCAeditomIDpositionP-valCoeff.

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Relation with survival for TCAIM

check button Correlation between RNA editing and survival
CancerCAeditomIDpositionKMpvalueCoxpvalueCoxHR

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RelatedDrugs for TCAIM

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for TCAIM

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease name# pubmedsSource