Home

Download

Statistics

Examples

Help

Contact

Editing gene: ZNF619 (CAeditome ID:285267)

Gene summary for ZNF619

Gene summary

Gene information	Gene symbol	ZNF619
	Gene ID	285267
	Gene name	zinc finger protein 619
	Synonyms	-
	Cytomap	3p22.1
	Type of gene	protein-coding
	Description	zinc finger protein 619
	Modification date	20210518
	UniProtAcc	Q8N2I2
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene

GO ID

GO term

PubMed ID

Top

RNA A-to-I events for ZNF619

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000177873.11

RNA A-to-I editing events in Cancer.

CAediting_269018(40488810, +), CAediting_269019(40488843, +), CAediting_269020(40488845, +), CAediting_269021(40488857, +), CAediting_269022(40488860, +), CAediting_269023(40488894, +), CAediting_269024(40488920, +), CAediting_269025(40488921, +), CAediting_269026(40488939, +), CAediting_269027(40489234, +), CAediting_269028(40489249, +), CAediting_269029(40489265, +), CAediting_269030(40489279, +), CAediting_269031(40489286, +), CAediting_269032(40489292, +), CAediting_269033(40489293, +), CAediting_269034(40489296, +), CAediting_269035(40489297, +), CAediting_269036(40489305, +), CAediting_269037(40489318, +), CAediting_269038(40489346, +), CAediting_269039(40489354, +), CAediting_269040(40489413, +), CAediting_269041(40489422, +), CAediting_269042(40489431, +), CAediting_269043(40489437, +), CAediting_269044(40489457, +), CAediting_269045(40489479, +), CAediting_269046(40489483, +), CAediting_269047(40489484, +), CAediting_269048(40489485, +), CAediting_269049(40489501, +), CAediting_269050(40489509, +), CAediting_269051(40489510, +), CAediting_269052(40489511, +), CAediting_269053(40489523, +), CAediting_269054(40489597, +),

Top

RNA editing positional annotations for ZNF619 using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_269018	chr3_40488810_+	UTR3
CAediting_269019	chr3_40488843_+	UTR3
CAediting_269020	chr3_40488845_+	UTR3
CAediting_269021	chr3_40488857_+	UTR3
CAediting_269022	chr3_40488860_+	UTR3
CAediting_269023	chr3_40488894_+	UTR3
CAediting_269024	chr3_40488920_+	UTR3
CAediting_269025	chr3_40488921_+	UTR3
CAediting_269026	chr3_40488939_+	UTR3
CAediting_269027	chr3_40489234_+	UTR3
CAediting_269028	chr3_40489249_+	UTR3
CAediting_269029	chr3_40489265_+	UTR3
CAediting_269030	chr3_40489279_+	UTR3
CAediting_269031	chr3_40489286_+	UTR3
CAediting_269032	chr3_40489292_+	UTR3
CAediting_269033	chr3_40489293_+	UTR3
CAediting_269034	chr3_40489296_+	UTR3
CAediting_269035	chr3_40489297_+	UTR3
CAediting_269036	chr3_40489305_+	UTR3
CAediting_269037	chr3_40489318_+	UTR3
CAediting_269038	chr3_40489346_+	UTR3
CAediting_269039	chr3_40489354_+	UTR3
CAediting_269040	chr3_40489413_+	UTR3
CAediting_269041	chr3_40489422_+	UTR3
CAediting_269042	chr3_40489431_+	UTR3
CAediting_269043	chr3_40489437_+	UTR3
CAediting_269044	chr3_40489457_+	UTR3
CAediting_269045	chr3_40489479_+	UTR3
CAediting_269046	chr3_40489483_+	UTR3
CAediting_269047	chr3_40489484_+	UTR3
CAediting_269048	chr3_40489485_+	UTR3
CAediting_269049	chr3_40489501_+	UTR3
CAediting_269050	chr3_40489509_+	UTR3
CAediting_269051	chr3_40489510_+	UTR3
CAediting_269052	chr3_40489511_+	UTR3
CAediting_269053	chr3_40489523_+	UTR3
CAediting_269054	chr3_40489597_+	UTR3

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_269018	chr3_40488810_+	SINE	Alu	AluSq2
CAediting_269019	chr3_40488843_+	SINE	Alu	AluSq2
CAediting_269020	chr3_40488845_+	SINE	Alu	AluSq2
CAediting_269021	chr3_40488857_+	SINE	Alu	AluSq2
CAediting_269022	chr3_40488860_+	SINE	Alu	AluSq2
CAediting_269023	chr3_40488894_+	SINE	Alu	AluSq2
CAediting_269024	chr3_40488920_+	SINE	Alu	AluSq2
CAediting_269025	chr3_40488921_+	SINE	Alu	AluSq2
CAediting_269026	chr3_40488939_+	SINE	Alu	AluSq2
CAediting_269027	chr3_40489234_+	SINE	Alu	AluJb
CAediting_269028	chr3_40489249_+	SINE	Alu	AluJb
CAediting_269029	chr3_40489265_+	SINE	Alu	AluJb
CAediting_269030	chr3_40489279_+	SINE	Alu	AluJb
CAediting_269031	chr3_40489286_+	SINE	Alu	AluJb
CAediting_269032	chr3_40489292_+	SINE	Alu	AluJb
CAediting_269033	chr3_40489293_+	SINE	Alu	AluJb
CAediting_269034	chr3_40489296_+	SINE	Alu	AluJb
CAediting_269035	chr3_40489297_+	SINE	Alu	AluJb
CAediting_269036	chr3_40489305_+	SINE	Alu	AluJb
CAediting_269037	chr3_40489318_+	SINE	Alu	AluJb
CAediting_269038	chr3_40489346_+	SINE	Alu	AluJb
CAediting_269039	chr3_40489354_+	SINE	Alu	AluJb
CAediting_269040	chr3_40489413_+	SINE	Alu	AluJb
CAediting_269041	chr3_40489422_+	SINE	Alu	AluJb
CAediting_269042	chr3_40489431_+	SINE	Alu	AluJb
CAediting_269043	chr3_40489437_+	SINE	Alu	AluJb
CAediting_269044	chr3_40489457_+	SINE	Alu	AluJb
CAediting_269045	chr3_40489479_+	SINE	Alu	AluJb
CAediting_269046	chr3_40489483_+	SINE	Alu	AluJb
CAediting_269047	chr3_40489484_+	SINE	Alu	AluJb
CAediting_269048	chr3_40489485_+	SINE	Alu	AluJb
CAediting_269049	chr3_40489501_+	SINE	Alu	AluJb
CAediting_269050	chr3_40489509_+	SINE	Alu	AluJb
CAediting_269051	chr3_40489510_+	SINE	Alu	AluJb
CAediting_269052	chr3_40489511_+	SINE	Alu	AluJb
CAediting_269053	chr3_40489523_+	SINE	Alu	AluJb

Top

RNA A-to-I editing events in the alternative splicing sites for ZNF619

RNA A-to-I editing(s) in the alternative splicing sites.

AStype	CAeditomID	Editing position	AS position	AS direction	Exonic location	Wildtype sequence	Wildtype splicing strength	RNA edited sequence	RNA edited splicing strength
IR	CAediting_269031	chr3_40489286_+	40489285:40489293	5SS	2+0i	CAGGCTCAA	-6.56	CGGGCTCAA	-14.01
IR	CAediting_269032	chr3_40489292_+	40489285:40489293	5SS	0+5i	CAGGCTCAA	-6.56	CAGGCTCGA	-2.4
IR	CAediting_269033	chr3_40489293_+	40489285:40489293	5SS	0+6i	CAGGCTCAA	-6.56	CAGGCTCAG	-4.98
IR	CAediting_269039	chr3_40489354_+	40489351:40489373	3SS	0+17i	CTCAGAGGGCTGAGGTGGGAGGA	-40.81	CTCGGAGGGCTGAGGTGGGAGGA	-40.72

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000177873.11.ZNF619.

Correlation between RNA A-to-I editing and PSI for ENSG00000177873.11.ZNF619.

Top

Differntial gene expression between RNA A-to-I edited versus non-edited samples for ZNF619

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

Top

Protein coding region RNA A-to-I editings for ZNF619

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

Top

The effects of the RNA editing to the miRNA binding sites for ZNF619

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_269028	chr3_40489249_+	ENSG00000177873.11	ENST00000447116	hsa-miR-324-3p	40489243	40489249	7mer-m8	40489226	40489250	144.00	-22.37
CAediting_269028	chr3_40489249_+	ENSG00000177873.11	ENST00000447116	hsa-miR-767-5p	40489247	40489252	6mer	40489232	40489253	142.00	-20.59
CAediting_269028	chr3_40489249_+	ENSG00000177873.11	ENST00000429348	hsa-miR-324-3p	40489243	40489249	7mer-m8	40489226	40489250	144.00	-22.37
CAediting_269028	chr3_40489249_+	ENSG00000177873.11	ENST00000429348	hsa-miR-767-5p	40489247	40489252	6mer	40489232	40489253	142.00	-20.59
CAediting_269030	chr3_40489279_+	ENSG00000177873.11	ENST00000447116	hsa-miR-4493	40489277	40489283	7mer-m8	40489264	40489284	143.00	-17.24
CAediting_269030	chr3_40489279_+	ENSG00000177873.11	ENST00000447116	hsa-miR-4753-5p	40489276	40489282	7mer-m8	40489262	40489283	145.00	-14.05
CAediting_269030	chr3_40489279_+	ENSG00000177873.11	ENST00000429348	hsa-miR-4493	40489277	40489283	7mer-m8	40489264	40489284	143.00	-17.24
CAediting_269030	chr3_40489279_+	ENSG00000177873.11	ENST00000429348	hsa-miR-4753-5p	40489276	40489282	7mer-m8	40489262	40489283	145.00	-14.05
CAediting_269033	chr3_40489293_+	ENSG00000177873.11	ENST00000447116	hsa-miR-1199-5p	40489286	40489292	7mer-m8	40489274	40489293	148.00	-23.45
CAediting_269033	chr3_40489293_+	ENSG00000177873.11	ENST00000447116	hsa-miR-6751-3p	40489286	40489292	7mer-m8	40489273	40489293	145.00	-14.41
CAediting_269033	chr3_40489293_+	ENSG00000177873.11	ENST00000429348	hsa-miR-1199-5p	40489286	40489292	7mer-m8	40489274	40489293	148.00	-23.45
CAediting_269033	chr3_40489293_+	ENSG00000177873.11	ENST00000429348	hsa-miR-6751-3p	40489286	40489292	7mer-m8	40489273	40489293	145.00	-14.41
CAediting_269047	chr3_40489484_+	ENSG00000177873.11	ENST00000447116	hsa-miR-3200-5p	40489479	40489485	7mer-m8	40489463	40489486	141.00	-14.21
CAediting_269047	chr3_40489484_+	ENSG00000177873.11	ENST00000447116	hsa-miR-452-3p	40489481	40489487	7mer-m8	40489467	40489488	140.00	-11.83
CAediting_269047	chr3_40489484_+	ENSG00000177873.11	ENST00000429348	hsa-miR-3200-5p	40489479	40489485	7mer-m8	40489463	40489486	141.00	-14.21
CAediting_269047	chr3_40489484_+	ENSG00000177873.11	ENST00000429348	hsa-miR-452-3p	40489481	40489487	7mer-m8	40489467	40489488	140.00	-11.83
CAediting_269019	chr3_40488843_+	ENSG00000177873.11	ENST00000447116	hsa-miR-6509-3p	40488839	40488844	6mer	40488824	40488845	144.00	-15.26
CAediting_269019	chr3_40488843_+	ENSG00000177873.11	ENST00000429348	hsa-miR-6509-3p	40488839	40488844	6mer	40488824	40488845	144.00	-15.26
CAediting_269022	chr3_40488860_+	ENSG00000177873.11	ENST00000447116	hsa-miR-433-5p	40488854	40488860	7mer-m8	40488838	40488861	167.00	-28.70
CAediting_269022	chr3_40488860_+	ENSG00000177873.11	ENST00000429348	hsa-miR-433-5p	40488854	40488860	7mer-m8	40488838	40488861	167.00	-28.70
CAediting_269024	chr3_40488920_+	ENSG00000177873.11	ENST00000447116	hsa-miR-6771-5p	40488914	40488920	7mer-m8	40488902	40488921	156.00	-32.97
CAediting_269024	chr3_40488920_+	ENSG00000177873.11	ENST00000429348	hsa-miR-6771-5p	40488914	40488920	7mer-m8	40488902	40488921	156.00	-32.97
CAediting_269025	chr3_40488921_+	ENSG00000177873.11	ENST00000447116	hsa-miR-6765-3p	40488917	40488923	7mer-m8	40488904	40488924	145.00	-19.02
CAediting_269025	chr3_40488921_+	ENSG00000177873.11	ENST00000447116	hsa-miR-6804-3p	40488918	40488924	7mer-m8	40488904	40488925	140.00	-12.18
CAediting_269025	chr3_40488921_+	ENSG00000177873.11	ENST00000447116	hsa-miR-6852-5p	40488916	40488921	6mer	40488903	40488922	149.00	-27.53
CAediting_269025	chr3_40488921_+	ENSG00000177873.11	ENST00000429348	hsa-miR-6765-3p	40488917	40488923	7mer-m8	40488904	40488924	145.00	-19.02
CAediting_269025	chr3_40488921_+	ENSG00000177873.11	ENST00000429348	hsa-miR-6804-3p	40488918	40488924	7mer-m8	40488904	40488925	140.00	-12.18
CAediting_269025	chr3_40488921_+	ENSG00000177873.11	ENST00000429348	hsa-miR-6852-5p	40488916	40488921	6mer	40488903	40488922	149.00	-27.53
CAediting_269027	chr3_40489234_+	ENSG00000177873.11	ENST00000447116	hsa-miR-3940-3p	40489231	40489237	7mer-m8	40489217	40489238	163.00	-26.62
CAediting_269027	chr3_40489234_+	ENSG00000177873.11	ENST00000429348	hsa-miR-3940-3p	40489231	40489237	7mer-m8	40489217	40489238	163.00	-26.62
CAediting_269031	chr3_40489286_+	ENSG00000177873.11	ENST00000447116	hsa-miR-3940-3p	40489283	40489289	7mer-m8	40489268	40489290	155.00	-25.65
CAediting_269031	chr3_40489286_+	ENSG00000177873.11	ENST00000447116	hsa-miR-6125	40489279	40489285	7mer-m8	40489266	40489286	142.00	-19.66
CAediting_269031	chr3_40489286_+	ENSG00000177873.11	ENST00000429348	hsa-miR-3940-3p	40489283	40489289	7mer-m8	40489268	40489290	155.00	-25.65
CAediting_269031	chr3_40489286_+	ENSG00000177873.11	ENST00000429348	hsa-miR-6125	40489279	40489285	7mer-m8	40489266	40489286	142.00	-19.66
CAediting_269035	chr3_40489297_+	ENSG00000177873.11	ENST00000447116	hsa-miR-1288-3p	40489293	40489299	7mer-m8	40489280	40489300	160.00	-25.57
CAediting_269035	chr3_40489297_+	ENSG00000177873.11	ENST00000447116	hsa-miR-3169	40489294	40489300	7mer-m8	40489276	40489301	148.00	-20.62
CAediting_269035	chr3_40489297_+	ENSG00000177873.11	ENST00000429348	hsa-miR-1288-3p	40489293	40489299	7mer-m8	40489280	40489300	160.00	-25.57
CAediting_269035	chr3_40489297_+	ENSG00000177873.11	ENST00000429348	hsa-miR-3169	40489294	40489300	7mer-m8	40489276	40489301	148.00	-20.62
CAediting_269036	chr3_40489305_+	ENSG00000177873.11	ENST00000447116	hsa-miR-6765-5p	40489303	40489309	7mer-m8	40489289	40489310	155.00	-28.33
CAediting_269036	chr3_40489305_+	ENSG00000177873.11	ENST00000447116	hsa-miR-6787-5p	40489301	40489306	6mer	40489286	40489307	142.00	-22.17
CAediting_269036	chr3_40489305_+	ENSG00000177873.11	ENST00000429348	hsa-miR-6765-5p	40489303	40489309	7mer-m8	40489289	40489310	155.00	-28.33
CAediting_269036	chr3_40489305_+	ENSG00000177873.11	ENST00000429348	hsa-miR-6787-5p	40489301	40489306	6mer	40489286	40489307	142.00	-22.17
CAediting_269037	chr3_40489318_+	ENSG00000177873.11	ENST00000447116	hsa-miR-425-3p	40489312	40489318	7mer-m8	40489296	40489319	146.00	-15.06
CAediting_269037	chr3_40489318_+	ENSG00000177873.11	ENST00000429348	hsa-miR-425-3p	40489312	40489318	7mer-m8	40489296	40489319	146.00	-15.06
CAediting_269039	chr3_40489354_+	ENSG00000177873.11	ENST00000447116	hsa-miR-1470	40489352	40489358	7mer-m8	40489339	40489359	140.00	-19.04
CAediting_269039	chr3_40489354_+	ENSG00000177873.11	ENST00000429348	hsa-miR-1470	40489352	40489358	7mer-m8	40489339	40489359	140.00	-19.04
CAediting_269040	chr3_40489413_+	ENSG00000177873.11	ENST00000447116	hsa-miR-1207-3p	40489406	40489413	8mer-1a	40489396	40489413	140.00	-14.68
CAediting_269040	chr3_40489413_+	ENSG00000177873.11	ENST00000447116	hsa-miR-34a-3p	40489409	40489415	7mer-m8	40489394	40489416	141.00	-8.12
CAediting_269040	chr3_40489413_+	ENSG00000177873.11	ENST00000429348	hsa-miR-1207-3p	40489406	40489413	8mer-1a	40489396	40489413	140.00	-14.68
CAediting_269040	chr3_40489413_+	ENSG00000177873.11	ENST00000429348	hsa-miR-34a-3p	40489409	40489415	7mer-m8	40489394	40489416	141.00	-8.12
CAediting_269043	chr3_40489437_+	ENSG00000177873.11	ENST00000447116	hsa-miR-340-3p	40489431	40489438	8mer-1a	40489417	40489438	141.00	-16.23
CAediting_269043	chr3_40489437_+	ENSG00000177873.11	ENST00000447116	hsa-miR-6827-3p	40489431	40489438	8mer-1a	40489418	40489438	147.00	-16.64
CAediting_269043	chr3_40489437_+	ENSG00000177873.11	ENST00000429348	hsa-miR-340-3p	40489431	40489438	8mer-1a	40489417	40489438	141.00	-16.23
CAediting_269043	chr3_40489437_+	ENSG00000177873.11	ENST00000429348	hsa-miR-6827-3p	40489431	40489438	8mer-1a	40489418	40489438	147.00	-16.64
CAediting_269046	chr3_40489483_+	ENSG00000177873.11	ENST00000447116	hsa-miR-1298-5p	40489481	40489487	7mer-m8	40489469	40489488	158.00	-23.24
CAediting_269046	chr3_40489483_+	ENSG00000177873.11	ENST00000429348	hsa-miR-1298-5p	40489481	40489487	7mer-m8	40489469	40489488	158.00	-23.24
CAediting_269050	chr3_40489509_+	ENSG00000177873.11	ENST00000447116	hsa-miR-6771-5p	40489503	40489510	8mer-1a	40489486	40489510	150.00	-25.28
CAediting_269050	chr3_40489509_+	ENSG00000177873.11	ENST00000429348	hsa-miR-6771-5p	40489503	40489510	8mer-1a	40489486	40489510	150.00	-25.28
CAediting_269051	chr3_40489510_+	ENSG00000177873.11	ENST00000447116	hsa-miR-326	40489505	40489511	7mer-m8	40489493	40489512	140.00	-13.25
CAediting_269051	chr3_40489510_+	ENSG00000177873.11	ENST00000447116	hsa-miR-330-5p	40489505	40489511	7mer-m8	40489491	40489512	140.00	-18.44
CAediting_269051	chr3_40489510_+	ENSG00000177873.11	ENST00000447116	hsa-miR-4314	40489504	40489510	7mer-m8	40489494	40489511	143.00	-18.44
CAediting_269051	chr3_40489510_+	ENSG00000177873.11	ENST00000447116	hsa-miR-514a-5p	40489506	40489512	7mer-m8	40489490	40489513	150.00	-18.62
CAediting_269051	chr3_40489510_+	ENSG00000177873.11	ENST00000447116	hsa-miR-514a-5p	40489506	40489512	7mer-m8	40489490	40489513	150.00	-18.62
CAediting_269051	chr3_40489510_+	ENSG00000177873.11	ENST00000447116	hsa-miR-514a-5p	40489506	40489512	7mer-m8	40489490	40489513	150.00	-18.62
CAediting_269051	chr3_40489510_+	ENSG00000177873.11	ENST00000429348	hsa-miR-326	40489505	40489511	7mer-m8	40489493	40489512	140.00	-13.25
CAediting_269051	chr3_40489510_+	ENSG00000177873.11	ENST00000429348	hsa-miR-330-5p	40489505	40489511	7mer-m8	40489491	40489512	140.00	-18.44
CAediting_269051	chr3_40489510_+	ENSG00000177873.11	ENST00000429348	hsa-miR-4314	40489504	40489510	7mer-m8	40489494	40489511	143.00	-18.44
CAediting_269051	chr3_40489510_+	ENSG00000177873.11	ENST00000429348	hsa-miR-514a-5p	40489506	40489512	7mer-m8	40489490	40489513	150.00	-18.62
CAediting_269051	chr3_40489510_+	ENSG00000177873.11	ENST00000429348	hsa-miR-514a-5p	40489506	40489512	7mer-m8	40489490	40489513	150.00	-18.62
CAediting_269051	chr3_40489510_+	ENSG00000177873.11	ENST00000429348	hsa-miR-514a-5p	40489506	40489512	7mer-m8	40489490	40489513	150.00	-18.62
CAediting_269052	chr3_40489511_+	ENSG00000177873.11	ENST00000447116	hsa-miR-3189-3p	40489505	40489511	7mer-m8	40489490	40489512	153.00	-24.80
CAediting_269052	chr3_40489511_+	ENSG00000177873.11	ENST00000447116	hsa-miR-6813-3p	40489506	40489512	7mer-m8	40489493	40489513	140.00	-10.68
CAediting_269052	chr3_40489511_+	ENSG00000177873.11	ENST00000429348	hsa-miR-3189-3p	40489505	40489511	7mer-m8	40489490	40489512	153.00	-24.80
CAediting_269052	chr3_40489511_+	ENSG00000177873.11	ENST00000429348	hsa-miR-6813-3p	40489506	40489512	7mer-m8	40489493	40489513	140.00	-10.68
CAediting_269053	chr3_40489523_+	ENSG00000177873.11	ENST00000447116	hsa-miR-106a-3p	40489519	40489524	6mer	40489504	40489525	141.00	-21.13
CAediting_269053	chr3_40489523_+	ENSG00000177873.11	ENST00000429348	hsa-miR-106a-3p	40489519	40489524	6mer	40489504	40489525	141.00	-21.13
CAediting_269044	chr3_40489457_+	ENSG00000177873.11	ENST00000447116	hsa-miR-3940-3p	40489454	40489460	7mer-m8	40489440	40489461	143.00	-21.15
CAediting_269044	chr3_40489457_+	ENSG00000177873.11	ENST00000429348	hsa-miR-3940-3p	40489454	40489460	7mer-m8	40489440	40489461	143.00	-21.15
CAediting_269045	chr3_40489479_+	ENSG00000177873.11	ENST00000447116	hsa-miR-6840-3p	40489472	40489478	7mer-m8	40489459	40489479	156.00	-20.87
CAediting_269045	chr3_40489479_+	ENSG00000177873.11	ENST00000429348	hsa-miR-6840-3p	40489472	40489478	7mer-m8	40489459	40489479	156.00	-20.87

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_269039	chr3_40489354_+	ENSG00000177873.11	ENST00000447116	hsa-miR-12119	40489350	40489355	6mer	40489332	40489356	140	-20.3
CAediting_269024	chr3_40488920_+	ENSG00000177873.11	ENST00000447116	hsa-miR-12126	40488916	40488922	7mer-m8	40488900	40488923	147	-16.06
CAediting_269025	chr3_40488921_+	ENSG00000177873.11	ENST00000447116	hsa-miR-12126	40488916	40488922	7mer-m8	40488900	40488923	147	-16.06
CAediting_269036	chr3_40489305_+	ENSG00000177873.11	ENST00000447116	hsa-miR-1233-5p	40489299	40489305	7mer-m8	40489285	40489306	145	-19.96
CAediting_269036	chr3_40489305_+	ENSG00000177873.11	ENST00000447116	hsa-miR-1233-5p	40489299	40489305	7mer-m8	40489285	40489306	145	-19.96
CAediting_269029	chr3_40489265_+	ENSG00000177873.11	ENST00000447116	hsa-miR-1245a	40489260	40489266	7mer-m8	40489244	40489267	153	-17.37
CAediting_269038	chr3_40489346_+	ENSG00000177873.11	ENST00000447116	hsa-miR-1273h-5p	40489339	40489345	7mer-m8	40489327	40489346	144	-23.4
CAediting_269024	chr3_40488920_+	ENSG00000177873.11	ENST00000447116	hsa-miR-1273h-5p	40488914	40488920	7mer-1a	40488900	40488920	141	-18.99
CAediting_269042	chr3_40489431_+	ENSG00000177873.11	ENST00000447116	hsa-miR-1283	40489425	40489432	8mer-1a	40489411	40489432	149	-11.59
CAediting_269042	chr3_40489431_+	ENSG00000177873.11	ENST00000447116	hsa-miR-1283	40489425	40489432	8mer-1a	40489411	40489432	149	-11.59
CAediting_269039	chr3_40489354_+	ENSG00000177873.11	ENST00000447116	hsa-miR-2276-5p	40489352	40489358	7mer-m8	40489337	40489359	146	-18.3
CAediting_269036	chr3_40489305_+	ENSG00000177873.11	ENST00000447116	hsa-miR-30b-3p	40489298	40489304	7mer-m8	40489286	40489305	146	-15.96
CAediting_269038	chr3_40489346_+	ENSG00000177873.11	ENST00000447116	hsa-miR-30b-3p	40489339	40489345	7mer-m8	40489323	40489346	150	-27.36
CAediting_269024	chr3_40488920_+	ENSG00000177873.11	ENST00000447116	hsa-miR-30c-1-3p	40488913	40488920	8mer-1a	40488896	40488920	143	-13.56
CAediting_269024	chr3_40488920_+	ENSG00000177873.11	ENST00000447116	hsa-miR-30c-2-3p	40488913	40488920	8mer-1a	40488896	40488920	151	-16.81
CAediting_269031	chr3_40489286_+	ENSG00000177873.11	ENST00000447116	hsa-miR-3116	40489282	40489288	7mer-m8	40489267	40489289	147	-16.07
CAediting_269031	chr3_40489286_+	ENSG00000177873.11	ENST00000447116	hsa-miR-3116	40489282	40489288	7mer-m8	40489267	40489289	147	-16.07
CAediting_269024	chr3_40488920_+	ENSG00000177873.11	ENST00000447116	hsa-miR-3614-5p	40488917	40488923	7mer-m8	40488901	40488924	152	-21.18
CAediting_269025	chr3_40488921_+	ENSG00000177873.11	ENST00000447116	hsa-miR-3614-5p	40488917	40488923	7mer-m8	40488901	40488924	152	-21.18
CAediting_269049	chr3_40489501_+	ENSG00000177873.11	ENST00000447116	hsa-miR-3616-5p	40489494	40489500	7mer-m8	40489480	40489501	144	-9.93
CAediting_269023	chr3_40488894_+	ENSG00000177873.11	ENST00000447116	hsa-miR-3622a-3p	40488891	40488898	8mer-1a	40488877	40488898	144	-13.55
CAediting_269023	chr3_40488894_+	ENSG00000177873.11	ENST00000447116	hsa-miR-3622b-3p	40488891	40488898	8mer-1a	40488878	40488898	152	-18.25
CAediting_269036	chr3_40489305_+	ENSG00000177873.11	ENST00000447116	hsa-miR-3689a-3p	40489298	40489304	7mer-m8	40489282	40489305	147	-18.95
CAediting_269036	chr3_40489305_+	ENSG00000177873.11	ENST00000447116	hsa-miR-3689b-3p	40489298	40489304	7mer-m8	40489284	40489305	146	-17.57
CAediting_269038	chr3_40489346_+	ENSG00000177873.11	ENST00000447116	hsa-miR-3689b-3p	40489339	40489345	7mer-m8	40489324	40489346	152	-22.31
CAediting_269036	chr3_40489305_+	ENSG00000177873.11	ENST00000447116	hsa-miR-3689c	40489298	40489304	7mer-m8	40489284	40489305	146	-17.57
CAediting_269038	chr3_40489346_+	ENSG00000177873.11	ENST00000447116	hsa-miR-3689c	40489339	40489345	7mer-m8	40489324	40489346	152	-22.31
CAediting_269041	chr3_40489422_+	ENSG00000177873.11	ENST00000447116	hsa-miR-381-3p	40489417	40489422	6mer	40489402	40489423	140	-12.93
CAediting_269039	chr3_40489354_+	ENSG00000177873.11	ENST00000447116	hsa-miR-3921	40489350	40489356	7mer-m8	40489335	40489357	144	-14.71
CAediting_269030	chr3_40489279_+	ENSG00000177873.11	ENST00000447116	hsa-miR-3974	40489276	40489282	7mer-m8	40489261	40489283	145	-12.96
CAediting_269039	chr3_40489354_+	ENSG00000177873.11	ENST00000447116	hsa-miR-4251	40489348	40489355	8mer-1a	40489339	40489355	149	-16.2
CAediting_269049	chr3_40489501_+	ENSG00000177873.11	ENST00000447116	hsa-miR-4478	40489498	40489504	7mer-m8	40489489	40489505	151	-25.43
CAediting_269037	chr3_40489318_+	ENSG00000177873.11	ENST00000447116	hsa-miR-450a-1-3p	40489312	40489318	7mer-m8	40489298	40489319	140	-9.54
CAediting_269039	chr3_40489354_+	ENSG00000177873.11	ENST00000447116	hsa-miR-4653-5p	40489350	40489356	7mer-m8	40489336	40489357	147	-17.72
CAediting_269042	chr3_40489431_+	ENSG00000177873.11	ENST00000447116	hsa-miR-4684-5p	40489428	40489434	7mer-m8	40489413	40489435	151	-11.5
CAediting_269049	chr3_40489501_+	ENSG00000177873.11	ENST00000447116	hsa-miR-485-5p	40489499	40489505	7mer-m8	40489484	40489506	145	-16.79
CAediting_269030	chr3_40489279_+	ENSG00000177873.11	ENST00000447116	hsa-miR-493-3p	40489277	40489283	7mer-m8	40489263	40489284	150	-19.15
CAediting_269044	chr3_40489457_+	ENSG00000177873.11	ENST00000447116	hsa-miR-5189-5p	40489451	40489457	7mer-m8	40489433	40489458	154	-24.18
CAediting_269042	chr3_40489431_+	ENSG00000177873.11	ENST00000447116	hsa-miR-519a-2-5p	40489427	40489434	8mer-1a	40489414	40489434	153	-15.12
CAediting_269042	chr3_40489431_+	ENSG00000177873.11	ENST00000447116	hsa-miR-520b-5p	40489427	40489434	8mer-1a	40489414	40489434	153	-15.12
CAediting_269049	chr3_40489501_+	ENSG00000177873.11	ENST00000447116	hsa-miR-573	40489494	40489500	7mer-m8	40489475	40489501	144	-16.35
CAediting_269046	chr3_40489483_+	ENSG00000177873.11	ENST00000447116	hsa-miR-579-3p	40489481	40489487	7mer-m8	40489465	40489488	144	-10.14
CAediting_269047	chr3_40489484_+	ENSG00000177873.11	ENST00000447116	hsa-miR-579-3p	40489481	40489487	7mer-m8	40489465	40489488	144	-10.14
CAediting_269048	chr3_40489485_+	ENSG00000177873.11	ENST00000447116	hsa-miR-579-3p	40489481	40489487	7mer-m8	40489465	40489488	144	-10.14
CAediting_269019	chr3_40488843_+	ENSG00000177873.11	ENST00000447116	hsa-miR-593-3p	40488842	40488848	7mer-1a	40488830	40488848	140	-19.02
CAediting_269020	chr3_40488845_+	ENSG00000177873.11	ENST00000447116	hsa-miR-593-3p	40488842	40488848	7mer-1a	40488830	40488848	140	-19.02
CAediting_269044	chr3_40489457_+	ENSG00000177873.11	ENST00000447116	hsa-miR-612	40489451	40489457	7mer-m8	40489434	40489458	154	-24.32
CAediting_269029	chr3_40489265_+	ENSG00000177873.11	ENST00000447116	hsa-miR-640	40489258	40489264	7mer-m8	40489245	40489265	153	-14.35
CAediting_269026	chr3_40488939_+	ENSG00000177873.11	ENST00000447116	hsa-miR-6514-3p	40488932	40488938	7mer-m8	40488919	40488939	155	-17.54
CAediting_269044	chr3_40489457_+	ENSG00000177873.11	ENST00000447116	hsa-miR-661	40489453	40489459	7mer-m8	40489436	40489460	151	-22.73
CAediting_269046	chr3_40489483_+	ENSG00000177873.11	ENST00000447116	hsa-miR-664b-3p	40489481	40489487	7mer-m8	40489468	40489488	150	-12.46
CAediting_269047	chr3_40489484_+	ENSG00000177873.11	ENST00000447116	hsa-miR-664b-3p	40489481	40489487	7mer-m8	40489468	40489488	150	-12.46
CAediting_269048	chr3_40489485_+	ENSG00000177873.11	ENST00000447116	hsa-miR-664b-3p	40489481	40489487	7mer-m8	40489468	40489488	150	-12.46
CAediting_269039	chr3_40489354_+	ENSG00000177873.11	ENST00000447116	hsa-miR-6761-5p	40489349	40489355	7mer-1a	40489336	40489355	141	-20.24
CAediting_269036	chr3_40489305_+	ENSG00000177873.11	ENST00000447116	hsa-miR-6778-5p	40489299	40489305	7mer-m8	40489282	40489306	151	-25.31
CAediting_269038	chr3_40489346_+	ENSG00000177873.11	ENST00000447116	hsa-miR-6779-5p	40489339	40489345	7mer-m8	40489328	40489346	146	-22.16
CAediting_269038	chr3_40489346_+	ENSG00000177873.11	ENST00000447116	hsa-miR-6780a-5p	40489339	40489345	7mer-m8	40489324	40489346	142	-17.8
CAediting_269024	chr3_40488920_+	ENSG00000177873.11	ENST00000447116	hsa-miR-6780a-5p	40488914	40488920	7mer-1a	40488897	40488920	144	-21.8
CAediting_269043	chr3_40489437_+	ENSG00000177873.11	ENST00000447116	hsa-miR-6818-3p	40489430	40489436	7mer-m8	40489416	40489437	140	-12.56
CAediting_269020	chr3_40488845_+	ENSG00000177873.11	ENST00000447116	hsa-miR-6818-3p	40488842	40488848	7mer-m8	40488828	40488849	140	-12.56
CAediting_269026	chr3_40488939_+	ENSG00000177873.11	ENST00000447116	hsa-miR-6847-3p	40488937	40488943	7mer-m8	40488922	40488944	153	-22.19
CAediting_269044	chr3_40489457_+	ENSG00000177873.11	ENST00000447116	hsa-miR-6860	40489451	40489457	7mer-m8	40489440	40489458	148	-19.34
CAediting_269049	chr3_40489501_+	ENSG00000177873.11	ENST00000447116	hsa-miR-6884-5p	40489499	40489505	7mer-m8	40489486	40489506	153	-19.71
CAediting_269043	chr3_40489437_+	ENSG00000177873.11	ENST00000447116	hsa-miR-6888-3p	40489432	40489438	7mer-m8	40489419	40489439	148	-12.7
CAediting_269023	chr3_40488894_+	ENSG00000177873.11	ENST00000447116	hsa-miR-7162-3p	40488888	40488894	7mer-m8	40488875	40488895	142	-15.92
CAediting_269029	chr3_40489265_+	ENSG00000177873.11	ENST00000447116	hsa-miR-8079	40489260	40489266	7mer-m8	40489248	40489267	140	-14.78
CAediting_269045	chr3_40489479_+	ENSG00000177873.11	ENST00000447116	hsa-miR-8081	40489477	40489484	8mer-1a	40489462	40489484	152	-8.51
CAediting_269046	chr3_40489483_+	ENSG00000177873.11	ENST00000447116	hsa-miR-8081	40489477	40489484	8mer-1a	40489462	40489484	152	-8.51
CAediting_269047	chr3_40489484_+	ENSG00000177873.11	ENST00000447116	hsa-miR-8081	40489477	40489484	8mer-1a	40489462	40489484	152	-8.51
CAediting_269050	chr3_40489509_+	ENSG00000177873.11	ENST00000447116	hsa-miR-887-5p	40489503	40489510	8mer-1a	40489491	40489510	143	-15.22
CAediting_269051	chr3_40489510_+	ENSG00000177873.11	ENST00000447116	hsa-miR-887-5p	40489503	40489510	8mer-1a	40489491	40489510	143	-15.22
CAediting_269024	chr3_40488920_+	ENSG00000177873.11	ENST00000447116	hsa-miR-887-5p	40488914	40488920	7mer-m8	40488902	40488921	143	-20.14
CAediting_269025	chr3_40488921_+	ENSG00000177873.11	ENST00000447116	hsa-miR-887-5p	40488914	40488920	7mer-m8	40488902	40488921	143	-20.14
CAediting_269044	chr3_40489457_+	ENSG00000177873.11	ENST00000447116	hsa-miR-939-3p	40489452	40489458	7mer-m8	40489439	40489459	140	-15.63
CAediting_269039	chr3_40489354_+	ENSG00000177873.11	ENST00000429348	hsa-miR-12119	40489350	40489355	6mer	40489332	40489356	140	-20.3
CAediting_269024	chr3_40488920_+	ENSG00000177873.11	ENST00000429348	hsa-miR-12126	40488916	40488922	7mer-m8	40488900	40488923	147	-16.06
CAediting_269025	chr3_40488921_+	ENSG00000177873.11	ENST00000429348	hsa-miR-12126	40488916	40488922	7mer-m8	40488900	40488923	147	-16.06
CAediting_269036	chr3_40489305_+	ENSG00000177873.11	ENST00000429348	hsa-miR-1233-5p	40489299	40489305	7mer-m8	40489285	40489306	145	-19.96
CAediting_269036	chr3_40489305_+	ENSG00000177873.11	ENST00000429348	hsa-miR-1233-5p	40489299	40489305	7mer-m8	40489285	40489306	145	-19.96
CAediting_269029	chr3_40489265_+	ENSG00000177873.11	ENST00000429348	hsa-miR-1245a	40489260	40489266	7mer-m8	40489244	40489267	153	-17.37
CAediting_269038	chr3_40489346_+	ENSG00000177873.11	ENST00000429348	hsa-miR-1273h-5p	40489339	40489345	7mer-m8	40489327	40489346	144	-23.4
CAediting_269024	chr3_40488920_+	ENSG00000177873.11	ENST00000429348	hsa-miR-1273h-5p	40488914	40488920	7mer-1a	40488900	40488920	141	-18.99
CAediting_269042	chr3_40489431_+	ENSG00000177873.11	ENST00000429348	hsa-miR-1283	40489425	40489432	8mer-1a	40489411	40489432	149	-11.59
CAediting_269042	chr3_40489431_+	ENSG00000177873.11	ENST00000429348	hsa-miR-1283	40489425	40489432	8mer-1a	40489411	40489432	149	-11.59
CAediting_269039	chr3_40489354_+	ENSG00000177873.11	ENST00000429348	hsa-miR-2276-5p	40489352	40489358	7mer-m8	40489337	40489359	146	-18.3
CAediting_269036	chr3_40489305_+	ENSG00000177873.11	ENST00000429348	hsa-miR-30b-3p	40489298	40489304	7mer-m8	40489286	40489305	146	-15.96
CAediting_269038	chr3_40489346_+	ENSG00000177873.11	ENST00000429348	hsa-miR-30b-3p	40489339	40489345	7mer-m8	40489323	40489346	150	-27.36
CAediting_269024	chr3_40488920_+	ENSG00000177873.11	ENST00000429348	hsa-miR-30c-1-3p	40488913	40488920	8mer-1a	40488896	40488920	143	-13.56
CAediting_269024	chr3_40488920_+	ENSG00000177873.11	ENST00000429348	hsa-miR-30c-2-3p	40488913	40488920	8mer-1a	40488896	40488920	151	-16.81
CAediting_269031	chr3_40489286_+	ENSG00000177873.11	ENST00000429348	hsa-miR-3116	40489282	40489288	7mer-m8	40489267	40489289	147	-16.07
CAediting_269031	chr3_40489286_+	ENSG00000177873.11	ENST00000429348	hsa-miR-3116	40489282	40489288	7mer-m8	40489267	40489289	147	-16.07
CAediting_269024	chr3_40488920_+	ENSG00000177873.11	ENST00000429348	hsa-miR-3614-5p	40488917	40488923	7mer-m8	40488901	40488924	152	-21.18
CAediting_269025	chr3_40488921_+	ENSG00000177873.11	ENST00000429348	hsa-miR-3614-5p	40488917	40488923	7mer-m8	40488901	40488924	152	-21.18
CAediting_269049	chr3_40489501_+	ENSG00000177873.11	ENST00000429348	hsa-miR-3616-5p	40489494	40489500	7mer-m8	40489480	40489501	144	-9.93
CAediting_269023	chr3_40488894_+	ENSG00000177873.11	ENST00000429348	hsa-miR-3622a-3p	40488891	40488898	8mer-1a	40488877	40488898	144	-13.55
CAediting_269023	chr3_40488894_+	ENSG00000177873.11	ENST00000429348	hsa-miR-3622b-3p	40488891	40488898	8mer-1a	40488878	40488898	152	-18.25
CAediting_269036	chr3_40489305_+	ENSG00000177873.11	ENST00000429348	hsa-miR-3689a-3p	40489298	40489304	7mer-m8	40489282	40489305	147	-18.95
CAediting_269036	chr3_40489305_+	ENSG00000177873.11	ENST00000429348	hsa-miR-3689b-3p	40489298	40489304	7mer-m8	40489284	40489305	146	-17.57
CAediting_269038	chr3_40489346_+	ENSG00000177873.11	ENST00000429348	hsa-miR-3689b-3p	40489339	40489345	7mer-m8	40489324	40489346	152	-22.31
CAediting_269036	chr3_40489305_+	ENSG00000177873.11	ENST00000429348	hsa-miR-3689c	40489298	40489304	7mer-m8	40489284	40489305	146	-17.57
CAediting_269038	chr3_40489346_+	ENSG00000177873.11	ENST00000429348	hsa-miR-3689c	40489339	40489345	7mer-m8	40489324	40489346	152	-22.31
CAediting_269041	chr3_40489422_+	ENSG00000177873.11	ENST00000429348	hsa-miR-381-3p	40489417	40489422	6mer	40489402	40489423	140	-12.93
CAediting_269039	chr3_40489354_+	ENSG00000177873.11	ENST00000429348	hsa-miR-3921	40489350	40489356	7mer-m8	40489335	40489357	144	-14.71
CAediting_269030	chr3_40489279_+	ENSG00000177873.11	ENST00000429348	hsa-miR-3974	40489276	40489282	7mer-m8	40489261	40489283	145	-12.96
CAediting_269039	chr3_40489354_+	ENSG00000177873.11	ENST00000429348	hsa-miR-4251	40489348	40489355	8mer-1a	40489339	40489355	149	-16.2
CAediting_269049	chr3_40489501_+	ENSG00000177873.11	ENST00000429348	hsa-miR-4478	40489498	40489504	7mer-m8	40489489	40489505	151	-25.43
CAediting_269037	chr3_40489318_+	ENSG00000177873.11	ENST00000429348	hsa-miR-450a-1-3p	40489312	40489318	7mer-m8	40489298	40489319	140	-9.54
CAediting_269039	chr3_40489354_+	ENSG00000177873.11	ENST00000429348	hsa-miR-4653-5p	40489350	40489356	7mer-m8	40489336	40489357	147	-17.72
CAediting_269042	chr3_40489431_+	ENSG00000177873.11	ENST00000429348	hsa-miR-4684-5p	40489428	40489434	7mer-m8	40489413	40489435	151	-11.5
CAediting_269049	chr3_40489501_+	ENSG00000177873.11	ENST00000429348	hsa-miR-485-5p	40489499	40489505	7mer-m8	40489484	40489506	145	-16.79
CAediting_269030	chr3_40489279_+	ENSG00000177873.11	ENST00000429348	hsa-miR-493-3p	40489277	40489283	7mer-m8	40489263	40489284	150	-19.15
CAediting_269044	chr3_40489457_+	ENSG00000177873.11	ENST00000429348	hsa-miR-5189-5p	40489451	40489457	7mer-m8	40489433	40489458	154	-24.18
CAediting_269042	chr3_40489431_+	ENSG00000177873.11	ENST00000429348	hsa-miR-519a-2-5p	40489427	40489434	8mer-1a	40489414	40489434	153	-15.12
CAediting_269042	chr3_40489431_+	ENSG00000177873.11	ENST00000429348	hsa-miR-520b-5p	40489427	40489434	8mer-1a	40489414	40489434	153	-15.12
CAediting_269049	chr3_40489501_+	ENSG00000177873.11	ENST00000429348	hsa-miR-573	40489494	40489500	7mer-m8	40489475	40489501	144	-16.35
CAediting_269046	chr3_40489483_+	ENSG00000177873.11	ENST00000429348	hsa-miR-579-3p	40489481	40489487	7mer-m8	40489465	40489488	144	-10.14
CAediting_269047	chr3_40489484_+	ENSG00000177873.11	ENST00000429348	hsa-miR-579-3p	40489481	40489487	7mer-m8	40489465	40489488	144	-10.14
CAediting_269048	chr3_40489485_+	ENSG00000177873.11	ENST00000429348	hsa-miR-579-3p	40489481	40489487	7mer-m8	40489465	40489488	144	-10.14
CAediting_269019	chr3_40488843_+	ENSG00000177873.11	ENST00000429348	hsa-miR-593-3p	40488842	40488848	7mer-1a	40488830	40488848	140	-19.02
CAediting_269020	chr3_40488845_+	ENSG00000177873.11	ENST00000429348	hsa-miR-593-3p	40488842	40488848	7mer-1a	40488830	40488848	140	-19.02
CAediting_269044	chr3_40489457_+	ENSG00000177873.11	ENST00000429348	hsa-miR-612	40489451	40489457	7mer-m8	40489434	40489458	154	-24.32
CAediting_269029	chr3_40489265_+	ENSG00000177873.11	ENST00000429348	hsa-miR-640	40489258	40489264	7mer-m8	40489245	40489265	153	-14.35
CAediting_269026	chr3_40488939_+	ENSG00000177873.11	ENST00000429348	hsa-miR-6514-3p	40488932	40488938	7mer-m8	40488919	40488939	155	-17.54
CAediting_269044	chr3_40489457_+	ENSG00000177873.11	ENST00000429348	hsa-miR-661	40489453	40489459	7mer-m8	40489436	40489460	151	-22.73
CAediting_269046	chr3_40489483_+	ENSG00000177873.11	ENST00000429348	hsa-miR-664b-3p	40489481	40489487	7mer-m8	40489468	40489488	150	-12.46
CAediting_269047	chr3_40489484_+	ENSG00000177873.11	ENST00000429348	hsa-miR-664b-3p	40489481	40489487	7mer-m8	40489468	40489488	150	-12.46
CAediting_269048	chr3_40489485_+	ENSG00000177873.11	ENST00000429348	hsa-miR-664b-3p	40489481	40489487	7mer-m8	40489468	40489488	150	-12.46
CAediting_269039	chr3_40489354_+	ENSG00000177873.11	ENST00000429348	hsa-miR-6761-5p	40489349	40489355	7mer-1a	40489336	40489355	141	-20.24
CAediting_269036	chr3_40489305_+	ENSG00000177873.11	ENST00000429348	hsa-miR-6778-5p	40489299	40489305	7mer-m8	40489282	40489306	151	-25.31
CAediting_269038	chr3_40489346_+	ENSG00000177873.11	ENST00000429348	hsa-miR-6779-5p	40489339	40489345	7mer-m8	40489328	40489346	146	-22.16
CAediting_269038	chr3_40489346_+	ENSG00000177873.11	ENST00000429348	hsa-miR-6780a-5p	40489339	40489345	7mer-m8	40489324	40489346	142	-17.8
CAediting_269024	chr3_40488920_+	ENSG00000177873.11	ENST00000429348	hsa-miR-6780a-5p	40488914	40488920	7mer-1a	40488897	40488920	144	-21.8
CAediting_269043	chr3_40489437_+	ENSG00000177873.11	ENST00000429348	hsa-miR-6818-3p	40489430	40489436	7mer-m8	40489416	40489437	140	-12.56
CAediting_269020	chr3_40488845_+	ENSG00000177873.11	ENST00000429348	hsa-miR-6818-3p	40488842	40488848	7mer-m8	40488828	40488849	140	-12.56
CAediting_269026	chr3_40488939_+	ENSG00000177873.11	ENST00000429348	hsa-miR-6847-3p	40488937	40488943	7mer-m8	40488922	40488944	153	-22.19
CAediting_269044	chr3_40489457_+	ENSG00000177873.11	ENST00000429348	hsa-miR-6860	40489451	40489457	7mer-m8	40489440	40489458	148	-19.34
CAediting_269049	chr3_40489501_+	ENSG00000177873.11	ENST00000429348	hsa-miR-6884-5p	40489499	40489505	7mer-m8	40489486	40489506	153	-19.71
CAediting_269043	chr3_40489437_+	ENSG00000177873.11	ENST00000429348	hsa-miR-6888-3p	40489432	40489438	7mer-m8	40489419	40489439	148	-12.7
CAediting_269023	chr3_40488894_+	ENSG00000177873.11	ENST00000429348	hsa-miR-7162-3p	40488888	40488894	7mer-m8	40488875	40488895	142	-15.92
CAediting_269029	chr3_40489265_+	ENSG00000177873.11	ENST00000429348	hsa-miR-8079	40489260	40489266	7mer-m8	40489248	40489267	140	-14.78
CAediting_269045	chr3_40489479_+	ENSG00000177873.11	ENST00000429348	hsa-miR-8081	40489477	40489484	8mer-1a	40489462	40489484	152	-8.51
CAediting_269046	chr3_40489483_+	ENSG00000177873.11	ENST00000429348	hsa-miR-8081	40489477	40489484	8mer-1a	40489462	40489484	152	-8.51
CAediting_269047	chr3_40489484_+	ENSG00000177873.11	ENST00000429348	hsa-miR-8081	40489477	40489484	8mer-1a	40489462	40489484	152	-8.51
CAediting_269050	chr3_40489509_+	ENSG00000177873.11	ENST00000429348	hsa-miR-887-5p	40489503	40489510	8mer-1a	40489491	40489510	143	-15.22
CAediting_269051	chr3_40489510_+	ENSG00000177873.11	ENST00000429348	hsa-miR-887-5p	40489503	40489510	8mer-1a	40489491	40489510	143	-15.22
CAediting_269024	chr3_40488920_+	ENSG00000177873.11	ENST00000429348	hsa-miR-887-5p	40488914	40488920	7mer-m8	40488902	40488921	143	-20.14
CAediting_269025	chr3_40488921_+	ENSG00000177873.11	ENST00000429348	hsa-miR-887-5p	40488914	40488920	7mer-m8	40488902	40488921	143	-20.14
CAediting_269044	chr3_40489457_+	ENSG00000177873.11	ENST00000429348	hsa-miR-939-3p	40489452	40489458	7mer-m8	40489439	40489459	140	-15.63

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_846604	chr11_93733708_-	ENSG00000177873.11	ENST00000494154	hsa-miR-1304-3p	40487848	40487854	7mer-m8	40487836	40487855	156	-21.67
CAediting_1229414	chr17_67471546_+	ENSG00000177873.11	ENST00000314686	hsa-miR-548aa	40488322	40488328	7mer-m8	40488303	40488329	146	-10.04
CAediting_396018	chr5_1062918_-	ENSG00000177873.11	ENST00000314686	hsa-miR-4635	40488270	40488276	7mer-m8	40488256	40488277	152	-15.67
CAediting_1229414	chr17_67471546_+	ENSG00000177873.11	ENST00000447116	hsa-miR-548aa	40488322	40488328	7mer-m8	40488303	40488329	146	-10.04
CAediting_1229415	chr17_67471547_+	ENSG00000177873.11	ENST00000447116	hsa-miR-548aa	40490053	40490060	8mer-1a	40490036	40490060	156	-14.43
CAediting_396018	chr5_1062918_-	ENSG00000177873.11	ENST00000447116	hsa-miR-4635	40488270	40488276	7mer-m8	40488256	40488277	152	-15.67
CAediting_604450	chr7_133034877_-	ENSG00000177873.11	ENST00000447116	hsa-miR-3654	40489540	40489546	7mer-m8	40489529	40489547	154	-19.41
CAediting_524911	chr7_5495852_-	ENSG00000177873.11	ENST00000447116	hsa-miR-589-3p	40490099	40490105	7mer-m8	40490077	40490106	162	-28.82
CAediting_1229414	chr17_67471546_+	ENSG00000177873.11	ENST00000429348	hsa-miR-548aa	40488322	40488328	7mer-m8	40488303	40488329	146	-10.04
CAediting_1229415	chr17_67471547_+	ENSG00000177873.11	ENST00000429348	hsa-miR-548aa	40490053	40490060	8mer-1a	40490036	40490060	156	-14.43
CAediting_396018	chr5_1062918_-	ENSG00000177873.11	ENST00000429348	hsa-miR-4635	40488270	40488276	7mer-m8	40488256	40488277	152	-15.67
CAediting_604450	chr7_133034877_-	ENSG00000177873.11	ENST00000429348	hsa-miR-3654	40489540	40489546	7mer-m8	40489529	40489547	154	-19.41
CAediting_524911	chr7_5495852_-	ENSG00000177873.11	ENST00000429348	hsa-miR-589-3p	40490099	40490105	7mer-m8	40490077	40490106	162	-28.82
CAediting_1229414	chr17_67471546_+	ENSG00000177873.11	ENST00000456778	hsa-miR-548aa	40488322	40488328	7mer-m8	40488303	40488329	146	-10.04
CAediting_396018	chr5_1062918_-	ENSG00000177873.11	ENST00000456778	hsa-miR-4635	40488270	40488276	7mer-m8	40488256	40488277	152	-15.67
CAediting_1229414	chr17_67471546_+	ENSG00000177873.11	ENST00000494154	hsa-miR-548aa	40488322	40488328	7mer-m8	40488303	40488329	146	-10.04
CAediting_396018	chr5_1062918_-	ENSG00000177873.11	ENST00000494154	hsa-miR-4635	40488270	40488276	7mer-m8	40488256	40488277	152	-15.67
CAediting_524911	chr7_5495852_-	ENSG00000177873.11	ENST00000494154	hsa-miR-589-3p	40488037	40488043	7mer-m8	40488019	40488044	143	-15.36
CAediting_468389	chr6_31355314_-	ENSG00000177873.11	ENST00000494154	hsa-miR-6891-5p	40488014	40488019	6mer	40488001	40488020	145	-25.5

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_228905	chr2_188297554_+	ENSG00000177873.11	ENST00000494154	hsa-miR-561-3p	40487729	40487735	7mer-m8	40487715	40487736	147	-5.08

Differentially expressed gene-miRNA network

Top

The effects of the RNA editing to the stability of the RNA structures for ZNF619

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST	ENST type	RNA structure without RNA A-to-I editing.	RNA structure with RNA A-to-I editing.
ENST00000429348.5	protein_coding
ENST00000447116.5	protein_coding

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID	ENST	Editing_Position	MFE_withoneAI	MFE_withoutAI	MFE_withmultipleAI
CAediting_269018	ENST00000429348.5	chr3_40488810_+	-1352.70	-1353.10	-1402.10
CAediting_269019	ENST00000429348.5	chr3_40488843_+	-1354.00	-1353.10	-1402.10
CAediting_269020	ENST00000429348.5	chr3_40488845_+	-1354.20	-1353.10	-1402.10
CAediting_269021	ENST00000429348.5	chr3_40488857_+	-1355.10	-1353.10	-1402.10
CAediting_269022	ENST00000429348.5	chr3_40488860_+	-1353.10	-1353.10	-1402.10
CAediting_269023	ENST00000429348.5	chr3_40488894_+	-1352.40	-1353.10	-1402.10
CAediting_269024	ENST00000429348.5	chr3_40488920_+	-1352.60	-1353.10	-1402.10
CAediting_269025	ENST00000429348.5	chr3_40488921_+	-1355.20	-1353.10	-1402.10
CAediting_269026	ENST00000429348.5	chr3_40488939_+	-1353.90	-1353.10	-1402.10
CAediting_269027	ENST00000429348.5	chr3_40489234_+	-1352.40	-1353.10	-1402.10
CAediting_269028	ENST00000429348.5	chr3_40489249_+	-1357.20	-1353.10	-1402.10
CAediting_269029	ENST00000429348.5	chr3_40489265_+	-1357.50	-1353.10	-1402.10
CAediting_269030	ENST00000429348.5	chr3_40489279_+	-1356.50	-1353.10	-1402.10
CAediting_269031	ENST00000429348.5	chr3_40489286_+	-1356.50	-1353.10	-1402.10
CAediting_269032	ENST00000429348.5	chr3_40489292_+	-1352.80	-1353.10	-1402.10
CAediting_269033	ENST00000429348.5	chr3_40489293_+	-1352.80	-1353.10	-1402.10
CAediting_269034	ENST00000429348.5	chr3_40489296_+	-1352.80	-1353.10	-1402.10
CAediting_269035	ENST00000429348.5	chr3_40489297_+	-1353.10	-1353.10	-1402.10
CAediting_269036	ENST00000429348.5	chr3_40489305_+	-1352.70	-1353.10	-1402.10
CAediting_269037	ENST00000429348.5	chr3_40489318_+	-1356.50	-1353.10	-1402.10
CAediting_269038	ENST00000429348.5	chr3_40489346_+	-1352.40	-1353.10	-1402.10
CAediting_269039	ENST00000429348.5	chr3_40489354_+	-1356.70	-1353.10	-1402.10
CAediting_269040	ENST00000429348.5	chr3_40489413_+	-1353.10	-1353.10	-1402.10
CAediting_269041	ENST00000429348.5	chr3_40489422_+	-1352.20	-1353.10	-1402.10
CAediting_269042	ENST00000429348.5	chr3_40489431_+	-1355.10	-1353.10	-1402.10
CAediting_269043	ENST00000429348.5	chr3_40489437_+	-1353.00	-1353.10	-1402.10
CAediting_269044	ENST00000429348.5	chr3_40489457_+	-1352.90	-1353.10	-1402.10
CAediting_269045	ENST00000429348.5	chr3_40489479_+	-1353.70	-1353.10	-1402.10
CAediting_269046	ENST00000429348.5	chr3_40489483_+	-1353.10	-1353.10	-1402.10
CAediting_269047	ENST00000429348.5	chr3_40489484_+	-1353.40	-1353.10	-1402.10
CAediting_269048	ENST00000429348.5	chr3_40489485_+	-1355.50	-1353.10	-1402.10
CAediting_269049	ENST00000429348.5	chr3_40489501_+	-1355.20	-1353.10	-1402.10
CAediting_269050	ENST00000429348.5	chr3_40489509_+	-1356.40	-1353.10	-1402.10
CAediting_269051	ENST00000429348.5	chr3_40489510_+	-1355.80	-1353.10	-1402.10
CAediting_269052	ENST00000429348.5	chr3_40489511_+	-1353.10	-1353.10	-1402.10
CAediting_269053	ENST00000429348.5	chr3_40489523_+	-1353.20	-1353.10	-1402.10
CAediting_269054	ENST00000429348.5	chr3_40489597_+	-1359.70	-1353.10	-1402.10
CAediting_269018	ENST00000447116.5	chr3_40488810_+	-1382.00	-1382.40	-1433.70
CAediting_269019	ENST00000447116.5	chr3_40488843_+	-1383.40	-1382.40	-1433.70
CAediting_269020	ENST00000447116.5	chr3_40488845_+	-1382.10	-1382.40	-1433.70
CAediting_269021	ENST00000447116.5	chr3_40488857_+	-1382.90	-1382.40	-1433.70
CAediting_269022	ENST00000447116.5	chr3_40488860_+	-1382.40	-1382.40	-1433.70
CAediting_269023	ENST00000447116.5	chr3_40488894_+	-1381.70	-1382.40	-1433.70
CAediting_269024	ENST00000447116.5	chr3_40488920_+	-1382.80	-1382.40	-1433.70
CAediting_269025	ENST00000447116.5	chr3_40488921_+	-1385.30	-1382.40	-1433.70
CAediting_269026	ENST00000447116.5	chr3_40488939_+	-1383.90	-1382.40	-1433.70
CAediting_269027	ENST00000447116.5	chr3_40489234_+	-1381.90	-1382.40	-1433.70
CAediting_269028	ENST00000447116.5	chr3_40489249_+	-1387.90	-1382.40	-1433.70
CAediting_269029	ENST00000447116.5	chr3_40489265_+	-1385.00	-1382.40	-1433.70
CAediting_269030	ENST00000447116.5	chr3_40489279_+	-1386.80	-1382.40	-1433.70
CAediting_269031	ENST00000447116.5	chr3_40489286_+	-1385.80	-1382.40	-1433.70
CAediting_269032	ENST00000447116.5	chr3_40489292_+	-1382.10	-1382.40	-1433.70
CAediting_269033	ENST00000447116.5	chr3_40489293_+	-1382.10	-1382.40	-1433.70
CAediting_269034	ENST00000447116.5	chr3_40489296_+	-1382.10	-1382.40	-1433.70
CAediting_269035	ENST00000447116.5	chr3_40489297_+	-1382.40	-1382.40	-1433.70
CAediting_269036	ENST00000447116.5	chr3_40489305_+	-1382.00	-1382.40	-1433.70
CAediting_269037	ENST00000447116.5	chr3_40489318_+	-1385.80	-1382.40	-1433.70
CAediting_269038	ENST00000447116.5	chr3_40489346_+	-1381.70	-1382.40	-1433.70
CAediting_269039	ENST00000447116.5	chr3_40489354_+	-1386.00	-1382.40	-1433.70
CAediting_269040	ENST00000447116.5	chr3_40489413_+	-1381.90	-1382.40	-1433.70
CAediting_269041	ENST00000447116.5	chr3_40489422_+	-1382.80	-1382.40	-1433.70
CAediting_269042	ENST00000447116.5	chr3_40489431_+	-1385.40	-1382.40	-1433.70
CAediting_269043	ENST00000447116.5	chr3_40489437_+	-1382.90	-1382.40	-1433.70
CAediting_269044	ENST00000447116.5	chr3_40489457_+	-1382.30	-1382.40	-1433.70
CAediting_269045	ENST00000447116.5	chr3_40489479_+	-1387.20	-1382.40	-1433.70
CAediting_269046	ENST00000447116.5	chr3_40489483_+	-1382.90	-1382.40	-1433.70
CAediting_269047	ENST00000447116.5	chr3_40489484_+	-1383.80	-1382.40	-1433.70
CAediting_269048	ENST00000447116.5	chr3_40489485_+	-1387.20	-1382.40	-1433.70
CAediting_269049	ENST00000447116.5	chr3_40489501_+	-1385.90	-1382.40	-1433.70
CAediting_269050	ENST00000447116.5	chr3_40489509_+	-1387.10	-1382.40	-1433.70
CAediting_269051	ENST00000447116.5	chr3_40489510_+	-1385.10	-1382.40	-1433.70
CAediting_269052	ENST00000447116.5	chr3_40489511_+	-1383.70	-1382.40	-1433.70
CAediting_269053	ENST00000447116.5	chr3_40489523_+	-1382.90	-1382.40	-1433.70
CAediting_269054	ENST00000447116.5	chr3_40489597_+	-1389.00	-1382.40	-1433.70

Top

Relation with ADAR for ZNF619

Correlation between ADAR gene expression and RNA editing frequency

Cancer	CAeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
BRCA	CAediting_269033	chr3_40489293_+	0.000112578882272819	0.262728833987611	.	.	.	.
OV	CAediting_269039	chr3_40489354_+	0.0304115344016129	0.287016305964344	.	.	.	.

Top

Relation with cancer stages for ZNF619

Correlation between Cancer stages and RNA editing frequency

Cancer

Stage_type

CAeditomID

position

P-val

Coeff.

Top

Relation with survival for ZNF619

Correlation between RNA editing and survival

Cancer	CAeditomID	position	KMpvalue	Coxpvalue	CoxHR
OV	CAediting_269039	chr3_40489354_+	0.00191958630109512	0.00654594	0.0131012

Top

RelatedDrugs for ZNF619

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

Top

RelatedDiseases for ZNF619

Diseases associated with this gene.
(DisGeNet 7.0)

Gene

Disease ID

Disease name

# pubmeds

Source

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene