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Editing gene: C3orf38 (CAeditome ID:285237)

Gene summary for C3orf38

Gene summary

Gene information	Gene symbol	C3orf38
	Gene ID	285237
	Gene name	chromosome 3 open reading frame 38
	Synonyms	-
	Cytomap	3p11.1
	Type of gene	protein-coding
	Description	uncharacterized protein C3orf38dense incisors
	Modification date	20210518
	UniProtAcc	Q5JPI3
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene	GO ID	GO term	PubMed ID
C3orf38	GO:0043065	Uncharacterized protein C3orf38	17464193
C3orf38	GO:0005634	Uncharacterized protein C3orf38	17464193

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RNA A-to-I events for C3orf38

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000179021.8

RNA A-to-I editing events in Cancer.

CAediting_297139(88159447, +), CAediting_297140(88159448, +), CAediting_297141(88159453, +), CAediting_297142(88159482, +), CAediting_297143(88159499, +), CAediting_297144(88159524, +), CAediting_297145(88159535, +), CAediting_297146(88159538, +), CAediting_297147(88159539, +), CAediting_297148(88159540, +), CAediting_297149(88159541, +), CAediting_297150(88159542, +), CAediting_297151(88159544, +), CAediting_297152(88159547, +), CAediting_297153(88159548, +), CAediting_297154(88159549, +), CAediting_297155(88159550, +), CAediting_297156(88159554, +), CAediting_297157(88159558, +), CAediting_297158(88159589, +), CAediting_297159(88159599, +), CAediting_297160(88159605, +), CAediting_297161(88159609, +), CAediting_297162(88159621, +), CAediting_297163(88159625, +), CAediting_297164(88159631, +), CAediting_297165(88159639, +), CAediting_297166(88159640, +), CAediting_297167(88159647, +), CAediting_297168(88159655, +), CAediting_297169(88159660, +), CAediting_297170(88159664, +), CAediting_297171(88159669, +), CAediting_297172(88159676, +), CAediting_297173(88159679, +), CAediting_297174(88159720, +), CAediting_297175(88160542, +), CAediting_297176(88161428, +), CAediting_297177(88161493, +), CAediting_297178(88161541, +), CAediting_297179(88161547, +), CAediting_297180(88161554, +), CAediting_297181(88161564, +), CAediting_297182(88161572, +), CAediting_297183(88161596, +), CAediting_297184(88161625, +), CAediting_297185(88161626, +), CAediting_297186(88161627, +), CAediting_297187(88161639, +), CAediting_297188(88161655, +), CAediting_297189(88163310, +), CAediting_297190(88163317, +), CAediting_297191(88163324, +), CAediting_297192(88163326, +), CAediting_297193(88163327, +), CAediting_297194(88163332, +), CAediting_297195(88163335, +), CAediting_297196(88163370, +), CAediting_297197(88163373, +), CAediting_297198(88163378, +), CAediting_297199(88163384, +), CAediting_297200(88163394, +), CAediting_297201(88163426, +), CAediting_297202(88163427, +), CAediting_297203(88163430, +), CAediting_297204(88163431, +), CAediting_297205(88163446, +), CAediting_297206(88163455, +), CAediting_297207(88163456, +), CAediting_297208(88163462, +), CAediting_297209(88163466, +), CAediting_297210(88163473, +), CAediting_297211(88163479, +), CAediting_297212(88163508, +), CAediting_297213(88163511, +), CAediting_297214(88163515, +), CAediting_297215(88163524, +), CAediting_297216(88163528, +), CAediting_297217(88163533, +), CAediting_297218(88163548, +), CAediting_297219(88164235, +), CAediting_297220(88164252, +), CAediting_297221(88164258, +), CAediting_297222(88164278, +), CAediting_297223(88164283, +), CAediting_297224(88164314, +), CAediting_297225(88164315, +), CAediting_297226(88164332, +), CAediting_297227(88164341, +), CAediting_297228(88164344, +), CAediting_297229(88164354, +), CAediting_297230(88164356, +), CAediting_297231(88164380, +), CAediting_297232(88164381, +), CAediting_297233(88164396, +), CAediting_297234(88164399, +), CAediting_297235(88164413, +), CAediting_297236(88164414, +), CAediting_297237(88164418, +), CAediting_297238(88164425, +), CAediting_297239(88164438, +), CAediting_297240(88164477, +), CAediting_297241(88164478, +), CAediting_297242(88164490, +), CAediting_297243(88164492, +), CAediting_297244(88164551, +), CAediting_297245(88164556, +), CAediting_297246(88164582, +), CAediting_297247(88164585, +), CAediting_297248(88164591, +), CAediting_297249(88164607, +), CAediting_297250(88164620, +), CAediting_297251(88164644, +), CAediting_297252(88164656, +), CAediting_297253(88164663, +), CAediting_297254(88164666, +), CAediting_297255(88164668, +), CAediting_297256(88164692, +), CAediting_297257(88164693, +), CAediting_297258(88164709, +), CAediting_297259(88164712, +), CAediting_297260(88164714, +), CAediting_297261(88164729, +), CAediting_297262(88164734, +), CAediting_297263(88164750, +), CAediting_297264(88164766, +), CAediting_297265(88164778, +), CAediting_297266(88164787, +), CAediting_297267(88164788, +), CAediting_297268(88164794, +), CAediting_297269(88164800, +), CAediting_297270(88164802, +), CAediting_297271(88164809, +), CAediting_297272(88164816, +), CAediting_297273(88166018, +), CAediting_297274(88166040, +), CAediting_297275(88166047, +), CAediting_297276(88166052, +), CAediting_297277(88166058, +), CAediting_297278(88166060, +), CAediting_297279(88166061, +), CAediting_297280(88166071, +), CAediting_297281(88166076, +), CAediting_297282(88166093, +), CAediting_297283(88166096, +), CAediting_297284(88166097, +), CAediting_297285(88166101, +), CAediting_297286(88166114, +), CAediting_297287(88166123, +), CAediting_297288(88166126, +), CAediting_297289(88166136, +), CAediting_297290(88166138, +), CAediting_297291(88166142, +), CAediting_297292(88166162, +), CAediting_297293(88166163, +), CAediting_297294(88166171, +), CAediting_297295(88166177, +), CAediting_297296(88166182, +), CAediting_297297(88166186, +), CAediting_297298(88166197, +), CAediting_297299(88166206, +), CAediting_297300(88166217, +), CAediting_297301(88166218, +), CAediting_297302(88166219, +), CAediting_297303(88166226, +), CAediting_297304(88166234, +), CAediting_297305(88166238, +), CAediting_297306(88166255, +), CAediting_297307(88166269, +), CAediting_297308(88166278, +), CAediting_297309(88166291, +), CAediting_297310(88167107, +), CAediting_297311(88167120, +), CAediting_297312(88167121, +), CAediting_297313(88167160, +), CAediting_297314(88167163, +), CAediting_297315(88167164, +), CAediting_297316(88167166, +), CAediting_297317(88167201, +), CAediting_297318(88167242, +),

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RNA editing positional annotations for C3orf38 using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_297139	chr3_88159447_+	ncRNA_intronic
CAediting_297140	chr3_88159448_+	ncRNA_intronic
CAediting_297141	chr3_88159453_+	ncRNA_intronic
CAediting_297142	chr3_88159482_+	ncRNA_intronic
CAediting_297143	chr3_88159499_+	ncRNA_intronic
CAediting_297144	chr3_88159524_+	ncRNA_intronic
CAediting_297145	chr3_88159535_+	ncRNA_intronic
CAediting_297146	chr3_88159538_+	ncRNA_intronic
CAediting_297147	chr3_88159539_+	ncRNA_intronic
CAediting_297148	chr3_88159540_+	ncRNA_intronic
CAediting_297149	chr3_88159541_+	ncRNA_intronic
CAediting_297150	chr3_88159542_+	ncRNA_intronic
CAediting_297151	chr3_88159544_+	ncRNA_intronic
CAediting_297152	chr3_88159547_+	ncRNA_intronic
CAediting_297153	chr3_88159548_+	ncRNA_intronic
CAediting_297154	chr3_88159549_+	ncRNA_intronic
CAediting_297155	chr3_88159550_+	ncRNA_intronic
CAediting_297156	chr3_88159554_+	ncRNA_intronic
CAediting_297157	chr3_88159558_+	ncRNA_intronic
CAediting_297158	chr3_88159589_+	ncRNA_intronic
CAediting_297159	chr3_88159599_+	ncRNA_intronic
CAediting_297160	chr3_88159605_+	ncRNA_intronic
CAediting_297161	chr3_88159609_+	ncRNA_intronic
CAediting_297162	chr3_88159621_+	ncRNA_intronic
CAediting_297163	chr3_88159625_+	ncRNA_intronic
CAediting_297164	chr3_88159631_+	ncRNA_intronic
CAediting_297165	chr3_88159639_+	ncRNA_intronic
CAediting_297166	chr3_88159640_+	ncRNA_intronic
CAediting_297167	chr3_88159647_+	ncRNA_intronic
CAediting_297168	chr3_88159655_+	ncRNA_intronic
CAediting_297169	chr3_88159660_+	ncRNA_intronic
CAediting_297170	chr3_88159664_+	ncRNA_intronic
CAediting_297171	chr3_88159669_+	ncRNA_intronic
CAediting_297172	chr3_88159676_+	ncRNA_intronic
CAediting_297173	chr3_88159679_+	ncRNA_intronic
CAediting_297174	chr3_88159720_+	ncRNA_intronic
CAediting_297175	chr3_88160542_+	ncRNA_intronic
CAediting_297176	chr3_88161428_+	ncRNA_intronic
CAediting_297177	chr3_88161493_+	ncRNA_intronic
CAediting_297178	chr3_88161541_+	ncRNA_intronic
CAediting_297179	chr3_88161547_+	ncRNA_intronic
CAediting_297180	chr3_88161554_+	ncRNA_intronic
CAediting_297181	chr3_88161564_+	ncRNA_intronic
CAediting_297182	chr3_88161572_+	ncRNA_intronic
CAediting_297183	chr3_88161596_+	ncRNA_intronic
CAediting_297184	chr3_88161625_+	ncRNA_intronic
CAediting_297185	chr3_88161626_+	ncRNA_intronic
CAediting_297186	chr3_88161627_+	ncRNA_intronic
CAediting_297187	chr3_88161639_+	ncRNA_intronic
CAediting_297188	chr3_88161655_+	ncRNA_intronic
CAediting_297189	chr3_88163310_+	ncRNA_intronic
CAediting_297190	chr3_88163317_+	ncRNA_intronic
CAediting_297191	chr3_88163324_+	ncRNA_intronic
CAediting_297192	chr3_88163326_+	ncRNA_intronic
CAediting_297193	chr3_88163327_+	ncRNA_intronic
CAediting_297194	chr3_88163332_+	ncRNA_intronic
CAediting_297195	chr3_88163335_+	ncRNA_intronic
CAediting_297196	chr3_88163370_+	ncRNA_intronic
CAediting_297197	chr3_88163373_+	ncRNA_intronic
CAediting_297198	chr3_88163378_+	ncRNA_intronic
CAediting_297199	chr3_88163384_+	ncRNA_intronic
CAediting_297200	chr3_88163394_+	ncRNA_intronic
CAediting_297201	chr3_88163426_+	ncRNA_intronic
CAediting_297202	chr3_88163427_+	ncRNA_intronic
CAediting_297203	chr3_88163430_+	ncRNA_intronic
CAediting_297204	chr3_88163431_+	ncRNA_intronic
CAediting_297205	chr3_88163446_+	ncRNA_intronic
CAediting_297206	chr3_88163455_+	ncRNA_intronic
CAediting_297207	chr3_88163456_+	ncRNA_intronic
CAediting_297208	chr3_88163462_+	ncRNA_intronic
CAediting_297209	chr3_88163466_+	ncRNA_intronic
CAediting_297210	chr3_88163473_+	ncRNA_intronic
CAediting_297211	chr3_88163479_+	ncRNA_intronic
CAediting_297212	chr3_88163508_+	ncRNA_intronic
CAediting_297213	chr3_88163511_+	ncRNA_intronic
CAediting_297214	chr3_88163515_+	ncRNA_intronic
CAediting_297215	chr3_88163524_+	ncRNA_intronic
CAediting_297216	chr3_88163528_+	ncRNA_intronic
CAediting_297217	chr3_88163533_+	ncRNA_intronic
CAediting_297218	chr3_88163548_+	ncRNA_intronic
CAediting_297219	chr3_88164235_+	ncRNA_intronic
CAediting_297220	chr3_88164252_+	ncRNA_intronic
CAediting_297221	chr3_88164258_+	ncRNA_intronic
CAediting_297222	chr3_88164278_+	ncRNA_intronic
CAediting_297223	chr3_88164283_+	ncRNA_intronic
CAediting_297224	chr3_88164314_+	ncRNA_intronic
CAediting_297225	chr3_88164315_+	ncRNA_intronic
CAediting_297226	chr3_88164332_+	ncRNA_intronic
CAediting_297227	chr3_88164341_+	ncRNA_intronic
CAediting_297228	chr3_88164344_+	ncRNA_intronic
CAediting_297229	chr3_88164354_+	ncRNA_intronic
CAediting_297230	chr3_88164356_+	ncRNA_intronic
CAediting_297231	chr3_88164380_+	ncRNA_intronic
CAediting_297232	chr3_88164381_+	ncRNA_intronic
CAediting_297233	chr3_88164396_+	ncRNA_intronic
CAediting_297234	chr3_88164399_+	ncRNA_intronic
CAediting_297235	chr3_88164413_+	ncRNA_intronic
CAediting_297236	chr3_88164414_+	ncRNA_intronic
CAediting_297237	chr3_88164418_+	ncRNA_intronic
CAediting_297238	chr3_88164425_+	ncRNA_intronic
CAediting_297239	chr3_88164438_+	ncRNA_intronic
CAediting_297240	chr3_88164477_+	ncRNA_intronic
CAediting_297241	chr3_88164478_+	ncRNA_intronic
CAediting_297242	chr3_88164490_+	ncRNA_intronic
CAediting_297243	chr3_88164492_+	ncRNA_intronic
CAediting_297244	chr3_88164551_+	ncRNA_intronic
CAediting_297245	chr3_88164556_+	ncRNA_intronic
CAediting_297246	chr3_88164582_+	ncRNA_intronic
CAediting_297247	chr3_88164585_+	ncRNA_intronic
CAediting_297248	chr3_88164591_+	ncRNA_intronic
CAediting_297249	chr3_88164607_+	ncRNA_intronic
CAediting_297250	chr3_88164620_+	ncRNA_intronic
CAediting_297251	chr3_88164644_+	ncRNA_intronic
CAediting_297252	chr3_88164656_+	ncRNA_intronic
CAediting_297253	chr3_88164663_+	ncRNA_intronic
CAediting_297254	chr3_88164666_+	ncRNA_intronic
CAediting_297255	chr3_88164668_+	ncRNA_intronic
CAediting_297256	chr3_88164692_+	ncRNA_intronic
CAediting_297257	chr3_88164693_+	ncRNA_intronic
CAediting_297258	chr3_88164709_+	ncRNA_intronic
CAediting_297259	chr3_88164712_+	ncRNA_intronic
CAediting_297260	chr3_88164714_+	ncRNA_intronic
CAediting_297261	chr3_88164729_+	ncRNA_intronic
CAediting_297262	chr3_88164734_+	ncRNA_intronic
CAediting_297263	chr3_88164750_+	ncRNA_intronic
CAediting_297264	chr3_88164766_+	ncRNA_intronic
CAediting_297265	chr3_88164778_+	ncRNA_intronic
CAediting_297266	chr3_88164787_+	ncRNA_intronic
CAediting_297267	chr3_88164788_+	ncRNA_intronic
CAediting_297268	chr3_88164794_+	ncRNA_intronic
CAediting_297269	chr3_88164800_+	ncRNA_intronic
CAediting_297270	chr3_88164802_+	ncRNA_intronic
CAediting_297271	chr3_88164809_+	ncRNA_intronic
CAediting_297272	chr3_88164816_+	ncRNA_intronic
CAediting_297273	chr3_88166018_+	ncRNA_intronic
CAediting_297274	chr3_88166040_+	ncRNA_intronic
CAediting_297275	chr3_88166047_+	ncRNA_intronic
CAediting_297276	chr3_88166052_+	ncRNA_intronic
CAediting_297277	chr3_88166058_+	ncRNA_intronic
CAediting_297278	chr3_88166060_+	ncRNA_intronic
CAediting_297279	chr3_88166061_+	ncRNA_intronic
CAediting_297280	chr3_88166071_+	ncRNA_intronic
CAediting_297281	chr3_88166076_+	ncRNA_intronic
CAediting_297282	chr3_88166093_+	ncRNA_intronic
CAediting_297283	chr3_88166096_+	ncRNA_intronic
CAediting_297284	chr3_88166097_+	ncRNA_intronic
CAediting_297285	chr3_88166101_+	ncRNA_intronic
CAediting_297286	chr3_88166114_+	ncRNA_intronic
CAediting_297287	chr3_88166123_+	ncRNA_intronic
CAediting_297288	chr3_88166126_+	ncRNA_intronic
CAediting_297289	chr3_88166136_+	ncRNA_intronic
CAediting_297290	chr3_88166138_+	ncRNA_intronic
CAediting_297291	chr3_88166142_+	ncRNA_intronic
CAediting_297292	chr3_88166162_+	ncRNA_intronic
CAediting_297293	chr3_88166163_+	ncRNA_intronic
CAediting_297294	chr3_88166171_+	ncRNA_intronic
CAediting_297295	chr3_88166177_+	ncRNA_intronic
CAediting_297296	chr3_88166182_+	ncRNA_intronic
CAediting_297297	chr3_88166186_+	ncRNA_intronic
CAediting_297298	chr3_88166197_+	ncRNA_intronic
CAediting_297299	chr3_88166206_+	ncRNA_intronic
CAediting_297300	chr3_88166217_+	ncRNA_intronic
CAediting_297301	chr3_88166218_+	ncRNA_intronic
CAediting_297302	chr3_88166219_+	ncRNA_intronic
CAediting_297303	chr3_88166226_+	ncRNA_intronic
CAediting_297304	chr3_88166234_+	ncRNA_intronic
CAediting_297305	chr3_88166238_+	ncRNA_intronic
CAediting_297306	chr3_88166255_+	ncRNA_intronic
CAediting_297307	chr3_88166269_+	ncRNA_intronic
CAediting_297308	chr3_88166278_+	ncRNA_intronic
CAediting_297309	chr3_88166291_+	ncRNA_intronic
CAediting_297310	chr3_88167107_+	ncRNA_intronic
CAediting_297311	chr3_88167120_+	ncRNA_intronic
CAediting_297312	chr3_88167121_+	ncRNA_intronic
CAediting_297313	chr3_88167160_+	ncRNA_intronic
CAediting_297314	chr3_88167163_+	ncRNA_intronic
CAediting_297315	chr3_88167164_+	ncRNA_intronic
CAediting_297316	chr3_88167166_+	ncRNA_intronic
CAediting_297317	chr3_88167201_+	ncRNA_intronic
CAediting_297318	chr3_88167242_+	ncRNA_intronic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_297139	chr3_88159447_+	SINE	Alu	AluY
CAediting_297140	chr3_88159448_+	SINE	Alu	AluY
CAediting_297141	chr3_88159453_+	SINE	Alu	AluY
CAediting_297142	chr3_88159482_+	SINE	Alu	AluY
CAediting_297143	chr3_88159499_+	SINE	Alu	AluY
CAediting_297144	chr3_88159524_+	SINE	Alu	AluY
CAediting_297145	chr3_88159535_+	SINE	Alu	AluY
CAediting_297146	chr3_88159538_+	SINE	Alu	AluY
CAediting_297147	chr3_88159539_+	SINE	Alu	AluY
CAediting_297148	chr3_88159540_+	SINE	Alu	AluY
CAediting_297149	chr3_88159541_+	SINE	Alu	AluY
CAediting_297150	chr3_88159542_+	SINE	Alu	AluY
CAediting_297151	chr3_88159544_+	SINE	Alu	AluY
CAediting_297152	chr3_88159547_+	SINE	Alu	AluY
CAediting_297153	chr3_88159548_+	SINE	Alu	AluY
CAediting_297154	chr3_88159549_+	SINE	Alu	AluY
CAediting_297155	chr3_88159550_+	SINE	Alu	AluY
CAediting_297156	chr3_88159554_+	SINE	Alu	AluY
CAediting_297157	chr3_88159558_+	SINE	Alu	AluY
CAediting_297158	chr3_88159589_+	SINE	Alu	AluY
CAediting_297159	chr3_88159599_+	SINE	Alu	AluY
CAediting_297160	chr3_88159605_+	SINE	Alu	AluY
CAediting_297161	chr3_88159609_+	SINE	Alu	AluY
CAediting_297162	chr3_88159621_+	SINE	Alu	AluY
CAediting_297163	chr3_88159625_+	SINE	Alu	AluY
CAediting_297164	chr3_88159631_+	SINE	Alu	AluY
CAediting_297165	chr3_88159639_+	SINE	Alu	AluY
CAediting_297166	chr3_88159640_+	SINE	Alu	AluY
CAediting_297167	chr3_88159647_+	SINE	Alu	AluY
CAediting_297168	chr3_88159655_+	SINE	Alu	AluY
CAediting_297169	chr3_88159660_+	SINE	Alu	AluY
CAediting_297170	chr3_88159664_+	SINE	Alu	AluY
CAediting_297171	chr3_88159669_+	SINE	Alu	AluY
CAediting_297172	chr3_88159676_+	SINE	Alu	AluY
CAediting_297173	chr3_88159679_+	SINE	Alu	AluY
CAediting_297174	chr3_88159720_+	SINE	Alu	AluY
CAediting_297176	chr3_88161428_+	SINE	Alu	AluSc8
CAediting_297177	chr3_88161493_+	SINE	Alu	AluSc8
CAediting_297178	chr3_88161541_+	SINE	Alu	AluSc8
CAediting_297179	chr3_88161547_+	SINE	Alu	AluSc8
CAediting_297180	chr3_88161554_+	SINE	Alu	AluSc8
CAediting_297181	chr3_88161564_+	SINE	Alu	AluSc8
CAediting_297182	chr3_88161572_+	SINE	Alu	AluSc8
CAediting_297183	chr3_88161596_+	SINE	Alu	AluSc8
CAediting_297184	chr3_88161625_+	SINE	Alu	AluSc8
CAediting_297185	chr3_88161626_+	SINE	Alu	AluSc8
CAediting_297186	chr3_88161627_+	SINE	Alu	AluSc8
CAediting_297187	chr3_88161639_+	SINE	Alu	AluSc8
CAediting_297188	chr3_88161655_+	SINE	Alu	AluSc8
CAediting_297189	chr3_88163310_+	SINE	Alu	AluSg
CAediting_297190	chr3_88163317_+	SINE	Alu	AluSg
CAediting_297191	chr3_88163324_+	SINE	Alu	AluSg
CAediting_297192	chr3_88163326_+	SINE	Alu	AluSg
CAediting_297193	chr3_88163327_+	SINE	Alu	AluSg
CAediting_297194	chr3_88163332_+	SINE	Alu	AluSg
CAediting_297195	chr3_88163335_+	SINE	Alu	AluSg
CAediting_297196	chr3_88163370_+	SINE	Alu	AluSg
CAediting_297197	chr3_88163373_+	SINE	Alu	AluSg
CAediting_297198	chr3_88163378_+	SINE	Alu	AluSg
CAediting_297199	chr3_88163384_+	SINE	Alu	AluSg
CAediting_297200	chr3_88163394_+	SINE	Alu	AluSg
CAediting_297201	chr3_88163426_+	SINE	Alu	AluSg
CAediting_297202	chr3_88163427_+	SINE	Alu	AluSg
CAediting_297203	chr3_88163430_+	SINE	Alu	AluSg
CAediting_297204	chr3_88163431_+	SINE	Alu	AluSg
CAediting_297205	chr3_88163446_+	SINE	Alu	AluSg
CAediting_297206	chr3_88163455_+	SINE	Alu	AluSg
CAediting_297207	chr3_88163456_+	SINE	Alu	AluSg
CAediting_297208	chr3_88163462_+	SINE	Alu	AluSg
CAediting_297209	chr3_88163466_+	SINE	Alu	AluSg
CAediting_297210	chr3_88163473_+	SINE	Alu	AluSg
CAediting_297211	chr3_88163479_+	SINE	Alu	AluSg
CAediting_297212	chr3_88163508_+	SINE	Alu	AluSg
CAediting_297213	chr3_88163511_+	SINE	Alu	AluSg
CAediting_297214	chr3_88163515_+	SINE	Alu	AluSg
CAediting_297215	chr3_88163524_+	SINE	Alu	AluSg
CAediting_297216	chr3_88163528_+	SINE	Alu	AluSg
CAediting_297217	chr3_88163533_+	SINE	Alu	AluSg
CAediting_297218	chr3_88163548_+	SINE	Alu	AluSg
CAediting_297219	chr3_88164235_+	SINE	Alu	AluSq
CAediting_297220	chr3_88164252_+	SINE	Alu	AluSq
CAediting_297221	chr3_88164258_+	SINE	Alu	AluSq
CAediting_297222	chr3_88164278_+	SINE	Alu	AluSq
CAediting_297223	chr3_88164283_+	SINE	Alu	AluSq
CAediting_297224	chr3_88164314_+	SINE	Alu	AluSq
CAediting_297225	chr3_88164315_+	SINE	Alu	AluSq
CAediting_297226	chr3_88164332_+	SINE	Alu	AluSq
CAediting_297227	chr3_88164341_+	SINE	Alu	AluSq
CAediting_297228	chr3_88164344_+	SINE	Alu	AluSq
CAediting_297229	chr3_88164354_+	SINE	Alu	AluSq
CAediting_297230	chr3_88164356_+	SINE	Alu	AluSq
CAediting_297231	chr3_88164380_+	SINE	Alu	AluSq
CAediting_297232	chr3_88164381_+	SINE	Alu	AluSq
CAediting_297233	chr3_88164396_+	SINE	Alu	AluSq
CAediting_297234	chr3_88164399_+	SINE	Alu	AluSq
CAediting_297235	chr3_88164413_+	SINE	Alu	AluSq
CAediting_297236	chr3_88164414_+	SINE	Alu	AluSq
CAediting_297237	chr3_88164418_+	SINE	Alu	AluSq
CAediting_297238	chr3_88164425_+	SINE	Alu	AluSq
CAediting_297239	chr3_88164438_+	SINE	Alu	AluSq
CAediting_297240	chr3_88164477_+	SINE	Alu	AluSq
CAediting_297241	chr3_88164478_+	SINE	Alu	AluSq
CAediting_297242	chr3_88164490_+	SINE	Alu	AluSq
CAediting_297243	chr3_88164492_+	SINE	Alu	AluSq
CAediting_297244	chr3_88164551_+	SINE	Alu	AluYm1
CAediting_297245	chr3_88164556_+	SINE	Alu	AluYm1
CAediting_297246	chr3_88164582_+	SINE	Alu	AluYm1
CAediting_297247	chr3_88164585_+	SINE	Alu	AluYm1
CAediting_297248	chr3_88164591_+	SINE	Alu	AluYm1
CAediting_297249	chr3_88164607_+	SINE	Alu	AluYm1
CAediting_297250	chr3_88164620_+	SINE	Alu	AluYm1
CAediting_297251	chr3_88164644_+	SINE	Alu	AluYm1
CAediting_297252	chr3_88164656_+	SINE	Alu	AluYm1
CAediting_297253	chr3_88164663_+	SINE	Alu	AluYm1
CAediting_297254	chr3_88164666_+	SINE	Alu	AluYm1
CAediting_297255	chr3_88164668_+	SINE	Alu	AluYm1
CAediting_297256	chr3_88164692_+	SINE	Alu	AluYm1
CAediting_297257	chr3_88164693_+	SINE	Alu	AluYm1
CAediting_297258	chr3_88164709_+	SINE	Alu	AluYm1
CAediting_297259	chr3_88164712_+	SINE	Alu	AluYm1
CAediting_297260	chr3_88164714_+	SINE	Alu	AluYm1
CAediting_297261	chr3_88164729_+	SINE	Alu	AluYm1
CAediting_297262	chr3_88164734_+	SINE	Alu	AluYm1
CAediting_297263	chr3_88164750_+	SINE	Alu	AluYm1
CAediting_297264	chr3_88164766_+	SINE	Alu	AluYm1
CAediting_297265	chr3_88164778_+	SINE	Alu	AluYm1
CAediting_297266	chr3_88164787_+	SINE	Alu	AluYm1
CAediting_297267	chr3_88164788_+	SINE	Alu	AluYm1
CAediting_297268	chr3_88164794_+	SINE	Alu	AluYm1
CAediting_297269	chr3_88164800_+	SINE	Alu	AluYm1
CAediting_297270	chr3_88164802_+	SINE	Alu	AluYm1
CAediting_297271	chr3_88164809_+	SINE	Alu	AluYm1
CAediting_297272	chr3_88164816_+	SINE	Alu	AluYm1
CAediting_297273	chr3_88166018_+	SINE	Alu	AluSg
CAediting_297274	chr3_88166040_+	SINE	Alu	AluSg
CAediting_297275	chr3_88166047_+	SINE	Alu	AluSg
CAediting_297276	chr3_88166052_+	SINE	Alu	AluSg
CAediting_297277	chr3_88166058_+	SINE	Alu	AluSg
CAediting_297278	chr3_88166060_+	SINE	Alu	AluSg
CAediting_297279	chr3_88166061_+	SINE	Alu	AluSg
CAediting_297280	chr3_88166071_+	SINE	Alu	AluSg
CAediting_297281	chr3_88166076_+	SINE	Alu	AluSg
CAediting_297282	chr3_88166093_+	SINE	Alu	AluSg
CAediting_297283	chr3_88166096_+	SINE	Alu	AluSg
CAediting_297284	chr3_88166097_+	SINE	Alu	AluSg
CAediting_297285	chr3_88166101_+	SINE	Alu	AluSg
CAediting_297286	chr3_88166114_+	SINE	Alu	AluSg
CAediting_297287	chr3_88166123_+	SINE	Alu	AluSg
CAediting_297288	chr3_88166126_+	SINE	Alu	AluSg
CAediting_297289	chr3_88166136_+	SINE	Alu	AluSg
CAediting_297290	chr3_88166138_+	SINE	Alu	AluSg
CAediting_297291	chr3_88166142_+	SINE	Alu	AluSg
CAediting_297292	chr3_88166162_+	SINE	Alu	AluSg
CAediting_297293	chr3_88166163_+	SINE	Alu	AluSg
CAediting_297294	chr3_88166171_+	SINE	Alu	AluSg
CAediting_297295	chr3_88166177_+	SINE	Alu	AluSg
CAediting_297296	chr3_88166182_+	SINE	Alu	AluSg
CAediting_297297	chr3_88166186_+	SINE	Alu	AluSg
CAediting_297298	chr3_88166197_+	SINE	Alu	AluSg
CAediting_297299	chr3_88166206_+	SINE	Alu	AluSg
CAediting_297300	chr3_88166217_+	SINE	Alu	AluSg
CAediting_297301	chr3_88166218_+	SINE	Alu	AluSg
CAediting_297302	chr3_88166219_+	SINE	Alu	AluSg
CAediting_297303	chr3_88166226_+	SINE	Alu	AluSg
CAediting_297304	chr3_88166234_+	SINE	Alu	AluSg
CAediting_297305	chr3_88166238_+	SINE	Alu	AluSg
CAediting_297306	chr3_88166255_+	SINE	Alu	AluSg
CAediting_297307	chr3_88166269_+	SINE	Alu	AluSg
CAediting_297308	chr3_88166278_+	SINE	Alu	AluSg
CAediting_297309	chr3_88166291_+	SINE	Alu	AluSg
CAediting_297310	chr3_88167107_+	SINE	Alu	AluSx1
CAediting_297311	chr3_88167120_+	SINE	Alu	AluSx1
CAediting_297312	chr3_88167121_+	SINE	Alu	AluSx1
CAediting_297313	chr3_88167160_+	SINE	Alu	AluSx1
CAediting_297314	chr3_88167163_+	SINE	Alu	AluSx1
CAediting_297315	chr3_88167164_+	SINE	Alu	AluSx1
CAediting_297316	chr3_88167166_+	SINE	Alu	AluSx1
CAediting_297317	chr3_88167201_+	SINE	Alu	AluSx1
CAediting_297318	chr3_88167242_+	SINE	Alu	AluSx1

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RNA A-to-I editing events in the alternative splicing sites for C3orf38

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000179021.8.C3orf38.

Correlation between RNA A-to-I editing and PSI for ENSG00000179021.8.C3orf38.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for C3orf38

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for C3orf38

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for C3orf38

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_228905	chr2_188297554_+	ENSG00000179021.8	ENST00000486971	hsa-miR-561-3p	88156734	88156740	7mer-m8	88156720	88156741	140	-10.49
CAediting_1524209	chrX_134546392_-	ENSG00000179021.8	ENST00000486971	hsa-miR-503-5p	88156416	88156422	7mer-m8	88156402	88156423	156	-23.3

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for C3orf38

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST

ENST type

RNA structure without RNA A-to-I editing.

RNA structure with RNA A-to-I editing.

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID

ENST

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

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Relation with ADAR for C3orf38

Correlation between ADAR gene expression and RNA editing frequency

Cancer	CAeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
OV	CAediting_297262	chr3_88164734_+	.	.	0.0334229279436525	0.212928050395102	.	.
STAD	CAediting_297268	chr3_88164794_+	0.0191335924599434	0.20144771442107	.	.	.	.
BRCA	CAediting_297294	chr3_88166171_+	0.0444531898779136	0.274640407491202	.	.	.	.

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Relation with cancer stages for C3orf38

Correlation between Cancer stages and RNA editing frequency

Cancer	Stage_type	CAeditomID	position	P-val	Coeff.
STAD	pathologic_stage	CAediting_297268	chr3_88164794_+	0.0014313658020765	0.27475404192941

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Relation with survival for C3orf38

Correlation between RNA editing and survival

Cancer

CAeditomID

position

KMpvalue

Coxpvalue

CoxHR

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RelatedDrugs for C3orf38

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for C3orf38

Diseases associated with this gene.
(DisGeNet 7.0)

Gene

Disease ID

Disease name

# pubmeds

Source

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene