![]() |
||||||
|
![]() | |
![]() | |
![]() | Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples |
![]() | |
![]() | |
![]() | The effects of the RNA editing to the stability of the RNA structures |
![]() | |
![]() | |
![]() | |
![]() | |
![]() |
Editing gene: UNC80 (CAeditome ID:285175) |
Gene summary for UNC80 |
![]() |
Gene information | Gene symbol | UNC80 | Gene ID | 285175 |
Gene name | unc-80 homolog, NALCN channel complex subunit | |
Synonyms | C2orf21|UNC-80 | |
Cytomap | 2q34 | |
Type of gene | protein-coding | |
Description | protein unc-80 homologunc-80 homolog, NALCN activator | |
Modification date | 20210518 | |
UniProtAcc | Q8N2C7 | |
Context |
![]() |
Gene | GO ID | GO term | PubMed ID |
Top |
RNA A-to-I events for UNC80 |
![]() |
![]() |
![]() |
![]() |
CAediting_241225(209791670, +), CAediting_241226(209791705, +), CAediting_241227(209791709, +), CAediting_241228(209791713, +), CAediting_241229(209807490, +), CAediting_241230(209807491, +), CAediting_241231(209807637, +), CAediting_241232(209808308, +), CAediting_241233(209808443, +), CAediting_241234(209855025, +), CAediting_241235(209946242, +), CAediting_241236(209946248, +), CAediting_241237(209946254, +), CAediting_241238(209946255, +), CAediting_241239(209946276, +), CAediting_241240(209953163, +), CAediting_241241(209970346, +), CAediting_241242(209970889, +), CAediting_241243(209971261, +), CAediting_241244(209977056, +), |
Top |
RNA editing positional annotations for UNC80 using Annovar |
![]() |
CAeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
CAediting_241242 | chr2_209970889_+ | nonsynonymous SNV | ENST00000272845.9 | c.A7975G | p.S2659G | D | D | N |
CAediting_241242 | chr2_209970889_+ | nonsynonymous SNV | ENST00000333907.3 | c.A568G | p.S190G | D | D | N |
CAediting_241242 | chr2_209970889_+ | nonsynonymous SNV | ENST00000439458.4 | c.A7990G | p.S2664G | D | D | N |
![]() |
CAeditome ID | Position | Variant type |
CAediting_241225 | chr2_209791670_+ | ncRNA_intronic |
CAediting_241226 | chr2_209791705_+ | ncRNA_intronic |
CAediting_241227 | chr2_209791709_+ | ncRNA_intronic |
CAediting_241228 | chr2_209791713_+ | ncRNA_intronic |
CAediting_241229 | chr2_209807490_+ | intronic |
CAediting_241230 | chr2_209807491_+ | intronic |
CAediting_241231 | chr2_209807637_+ | intronic |
CAediting_241232 | chr2_209808308_+ | intronic |
CAediting_241233 | chr2_209808443_+ | intronic |
CAediting_241234 | chr2_209855025_+ | ncRNA_intronic |
CAediting_241235 | chr2_209946242_+ | ncRNA_intronic |
CAediting_241236 | chr2_209946248_+ | ncRNA_intronic |
CAediting_241237 | chr2_209946254_+ | ncRNA_intronic |
CAediting_241238 | chr2_209946255_+ | ncRNA_intronic |
CAediting_241239 | chr2_209946276_+ | ncRNA_intronic |
CAediting_241240 | chr2_209953163_+ | ncRNA_intronic |
CAediting_241241 | chr2_209970346_+ | ncRNA_intronic |
CAediting_241242 | chr2_209970889_+ | exonic |
CAediting_241243 | chr2_209971261_+ | ncRNA_intronic |
CAediting_241244 | chr2_209977056_+ | exonic |
![]() |
CAeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
CAediting_241225 | chr2_209791670_+ | SINE | Alu | AluY |
CAediting_241226 | chr2_209791705_+ | SINE | Alu | AluY |
CAediting_241227 | chr2_209791709_+ | SINE | Alu | AluY |
CAediting_241228 | chr2_209791713_+ | SINE | Alu | AluY |
CAediting_241229 | chr2_209807490_+ | SINE | Alu | AluY |
CAediting_241230 | chr2_209807491_+ | SINE | Alu | AluY |
CAediting_241231 | chr2_209807637_+ | SINE | Alu | AluY |
CAediting_241232 | chr2_209808308_+ | SINE | Alu | AluSx1 |
CAediting_241233 | chr2_209808443_+ | SINE | Alu | AluSx1 |
CAediting_241234 | chr2_209855025_+ | LINE | L1 | L1PA10 |
CAediting_241235 | chr2_209946242_+ | SINE | Alu | AluJo |
CAediting_241236 | chr2_209946248_+ | SINE | Alu | AluJo |
CAediting_241237 | chr2_209946254_+ | SINE | Alu | AluJo |
CAediting_241238 | chr2_209946255_+ | SINE | Alu | AluJo |
CAediting_241239 | chr2_209946276_+ | SINE | Alu | AluJo |
CAediting_241240 | chr2_209953163_+ | SINE | Alu | AluSx1 |
Top |
RNA A-to-I editing events in the alternative splicing sites for UNC80 |
![]() |
AStype | CAeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
![]() |
![]() |
Top |
Differntial gene expression between RNA A-to-I edited versus non-edited samples for UNC80 |
![]() * The grey color means N/A. |
![]() |
![]() * Click on the image to enlarge it in a new window. |
Top |
Protein coding region RNA A-to-I editings for UNC80 |
![]() * Click on the image to enlarge it in a new window. |
Top |
The effects of the RNA editing to the miRNA binding sites for UNC80 |
**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page. |
![]() |
CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
![]() |
CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
![]() |
CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
![]() |
CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
![]() |
CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
![]() |
CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
![]() |
CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
CAediting_980496 | chr14_31014685_- | ENSG00000144406.17 | ENST00000439458 | hsa-miR-624-3p | 209998808 | 209998813 | 6mer | 209998794 | 209998814 | 151 | -22.85 |
CAediting_393 | chr1_1167164_+ | ENSG00000144406.17 | ENST00000439458 | hsa-miR-200b-3p | 209998897 | 209998903 | 7mer-m8 | 209998883 | 209998904 | 145 | -13.09 |
CAediting_688080 | chr9_63819626_+ | ENSG00000144406.17 | ENST00000439458 | hsa-miR-4477b | 209996920 | 209996926 | 7mer-m8 | 209996906 | 209996927 | 145 | -12.72 |
CAediting_688080 | chr9_63819626_+ | ENSG00000144406.17 | ENST00000439458 | hsa-miR-4477b | 209998732 | 209998738 | 7mer-m8 | 209998716 | 209998739 | 154 | -10.8 |
CAediting_980496 | chr14_31014685_- | ENSG00000144406.17 | ENST00000272845 | hsa-miR-624-3p | 209998808 | 209998813 | 6mer | 209998794 | 209998814 | 151 | -22.85 |
CAediting_393 | chr1_1167164_+ | ENSG00000144406.17 | ENST00000272845 | hsa-miR-200b-3p | 209998897 | 209998903 | 7mer-m8 | 209998883 | 209998904 | 145 | -13.09 |
CAediting_688080 | chr9_63819626_+ | ENSG00000144406.17 | ENST00000272845 | hsa-miR-4477b | 209996920 | 209996926 | 7mer-m8 | 209996906 | 209996927 | 145 | -12.72 |
CAediting_688080 | chr9_63819626_+ | ENSG00000144406.17 | ENST00000272845 | hsa-miR-4477b | 209998732 | 209998738 | 7mer-m8 | 209998716 | 209998739 | 154 | -10.8 |
CAediting_1368054 | chr19_46709310_- | ENSG00000144406.17 | ENST00000439458 | hsa-miR-320e | 209998621 | 209998627 | 7mer-m8 | 209998610 | 209998628 | 154 | -22.92 |
CAediting_396018 | chr5_1062918_- | ENSG00000144406.17 | ENST00000439458 | hsa-miR-4635 | 209996921 | 209996928 | 8mer-1a | 209996907 | 209996928 | 153 | -17.53 |
CAediting_396018 | chr5_1062918_- | ENSG00000144406.17 | ENST00000439458 | hsa-miR-4635 | 209998733 | 209998739 | 7mer-m8 | 209998720 | 209998740 | 141 | -12.31 |
CAediting_1368054 | chr19_46709310_- | ENSG00000144406.17 | ENST00000272845 | hsa-miR-320e | 209998621 | 209998627 | 7mer-m8 | 209998610 | 209998628 | 154 | -22.92 |
CAediting_396018 | chr5_1062918_- | ENSG00000144406.17 | ENST00000272845 | hsa-miR-4635 | 209996921 | 209996928 | 8mer-1a | 209996907 | 209996928 | 153 | -17.53 |
CAediting_396018 | chr5_1062918_- | ENSG00000144406.17 | ENST00000272845 | hsa-miR-4635 | 209998733 | 209998739 | 7mer-m8 | 209998720 | 209998740 | 141 | -12.31 |
CAediting_1229414 | chr17_67471546_+ | ENSG00000144406.17 | ENST00000333907 | hsa-miR-548aa | 209982566 | 209982572 | 7mer-m8 | 209982549 | 209982573 | 140 | -9.05 |
CAediting_1524209 | chrX_134546392_- | ENSG00000144406.17 | ENST00000439458 | hsa-miR-503-5p | 209995737 | 209995743 | 7mer-1a | 209995721 | 209995743 | 148 | -20.9 |
CAediting_1524209 | chrX_134546392_- | ENSG00000144406.17 | ENST00000439458 | hsa-miR-503-5p | 209998616 | 209998621 | 6mer | 209998595 | 209998622 | 141 | -21.03 |
CAediting_1524209 | chrX_134546392_- | ENSG00000144406.17 | ENST00000272845 | hsa-miR-503-5p | 209995737 | 209995743 | 7mer-1a | 209995721 | 209995743 | 148 | -20.9 |
CAediting_1524209 | chrX_134546392_- | ENSG00000144406.17 | ENST00000272845 | hsa-miR-503-5p | 209998616 | 209998621 | 6mer | 209998595 | 209998622 | 141 | -21.03 |
![]() |
CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
CAediting_393 | chr1_1167164_+ | ENSG00000144406.17 | ENST00000439458 | hsa-miR-200b-3p | 209998310 | 209998316 | 7mer-m8 | 209998299 | 209998317 | 147 | -9.3 |
CAediting_396018 | chr5_1062918_- | ENSG00000144406.17 | ENST00000439458 | hsa-miR-4635 | 209996693 | 209996700 | 8mer-1a | 209996678 | 209996700 | 154 | -16.13 |
CAediting_1524209 | chrX_134546392_- | ENSG00000144406.17 | ENST00000439458 | hsa-miR-503-5p | 209995906 | 209995911 | 6mer | 209995889 | 209995912 | 143 | -16.02 |
CAediting_1524209 | chrX_134546392_- | ENSG00000144406.17 | ENST00000439458 | hsa-miR-503-5p | 209998779 | 209998786 | 8mer-1a | 209998769 | 209998786 | 146 | -21.28 |
CAediting_524911 | chr7_5495852_- | ENSG00000144406.17 | ENST00000439458 | hsa-miR-589-3p | 209997600 | 209997607 | 8mer-1a | 209997584 | 209997607 | 140 | -16.04 |
CAediting_980496 | chr14_31014685_- | ENSG00000144406.17 | ENST00000439458 | hsa-miR-624-3p | 209998838 | 209998843 | 6mer | 209998824 | 209998844 | 140 | -12.26 |
CAediting_393 | chr1_1167164_+ | ENSG00000144406.17 | ENST00000272845 | hsa-miR-200b-3p | 209998310 | 209998316 | 7mer-m8 | 209998299 | 209998317 | 147 | -9.3 |
CAediting_396018 | chr5_1062918_- | ENSG00000144406.17 | ENST00000272845 | hsa-miR-4635 | 209996693 | 209996700 | 8mer-1a | 209996678 | 209996700 | 154 | -16.13 |
CAediting_1524209 | chrX_134546392_- | ENSG00000144406.17 | ENST00000272845 | hsa-miR-503-5p | 209995906 | 209995911 | 6mer | 209995889 | 209995912 | 143 | -16.02 |
CAediting_1524209 | chrX_134546392_- | ENSG00000144406.17 | ENST00000272845 | hsa-miR-503-5p | 209998779 | 209998786 | 8mer-1a | 209998769 | 209998786 | 146 | -21.28 |
CAediting_524911 | chr7_5495852_- | ENSG00000144406.17 | ENST00000272845 | hsa-miR-589-3p | 209997600 | 209997607 | 8mer-1a | 209997584 | 209997607 | 140 | -16.04 |
CAediting_980496 | chr14_31014685_- | ENSG00000144406.17 | ENST00000272845 | hsa-miR-624-3p | 209998838 | 209998843 | 6mer | 209998824 | 209998844 | 140 | -12.26 |
![]() |
Top |
The effects of the RNA editing to the stability of the RNA structures for UNC80 |
![]() * Click on the image to enlarge it in a new window. |
![]() |
CAeditom_ID | ENST | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
CAediting_241242 | ENST00000272845.9 | chr2_209970889_+ | -4219.10 | -4218.80 | -4220.00 |
CAediting_241244 | ENST00000272845.9 | chr2_209977056_+ | -4219.70 | -4218.80 | -4220.00 |
CAediting_241242 | ENST00000439458.4 | chr2_209970889_+ | -4267.80 | -4267.50 | -4268.40 |
CAediting_241244 | ENST00000439458.4 | chr2_209977056_+ | -4268.10 | -4267.50 | -4268.40 |
CAediting_241242 | ENST00000333907.3 | chr2_209970889_+ | -741.60 | -741.30 | -743.00 |
CAediting_241244 | ENST00000333907.3 | chr2_209977056_+ | -742.70 | -741.30 | -743.00 |
CAediting_241242 | ENST00000477924.1 | chr2_209970889_+ | -909.20 | -909.60 | -910.10 |
CAediting_241244 | ENST00000477924.1 | chr2_209977056_+ | -910.50 | -909.60 | -910.10 |
Top |
Relation with ADAR for UNC80 |
![]() |
Cancer | CAeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
Top |
Relation with cancer stages for UNC80 |
![]() |
Cancer | Stage_type | CAeditomID | position | P-val | Coeff. |
Top |
Relation with survival for UNC80 |
![]() |
Cancer | CAeditomID | position | KMpvalue | Coxpvalue | CoxHR |
Top |
RelatedDrugs for UNC80 |
![]() (DrugBank Version 5.1.8 2021-01-03) |
Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
Top |
RelatedDiseases for UNC80 |
![]() (DisGeNet 7.0) |
Gene | Disease ID | Disease name | # pubmeds | Source |
UNC80 | C4225203 | HYPOTONIA, INFANTILE, WITH PSYCHOMOTOR RETARDATION AND CHARACTERISTIC FACIES 2 | 4 | CTD_human;GENOMICS_ENGLAND;UNIPROT |
UNC80 | C1510586 | Autism Spectrum Disorders | 1 | CTD_human |