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Editing gene: FAM182A (CAeditome ID:284800)

Gene summary for FAM182A

Gene summary

Gene information	Gene symbol	FAM182A
	Gene ID	284800
	Gene name	family with sequence similarity 182 member A
	Synonyms	C20orf91\|C20orf91A
	Cytomap	20p11.1
	Type of gene	ncRNA
	Description	-
	Modification date	20210518
	UniProtAcc	.
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene

GO ID

GO term

PubMed ID

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RNA A-to-I events for FAM182A

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000125804.12

RNA A-to-I editing events in Cancer.

CAediting_1411352(26083485, +), CAediting_1411353(26083493, +), CAediting_1411354(26083550, +), CAediting_1411355(26083571, +), CAediting_1411356(26083600, +), CAediting_1411357(26083615, +), CAediting_1411358(26083616, +), CAediting_1411359(26083619, +), CAediting_1411360(26083620, +), CAediting_1411361(26083622, +), CAediting_1411362(26083625, +), CAediting_1411363(26083634, +), CAediting_1411364(26083640, +), CAediting_1411365(26083644, +), CAediting_1411366(26083659, +), CAediting_1411367(26083662, +), CAediting_1411368(26083672, +), CAediting_1411369(26083687, +), CAediting_1411370(26083698, +), CAediting_1411371(26083699, +), CAediting_1411372(26083705, +), CAediting_1411373(26083713, +), CAediting_1411374(26083717, +), CAediting_1411375(26083724, +), CAediting_1411376(26083735, +), CAediting_1411377(26083742, +), CAediting_1411378(26083753, +), CAediting_1411379(26083764, +), CAediting_1411380(26083768, +), CAediting_1411381(26083779, +), CAediting_1411382(26083791, +), CAediting_1411383(26083802, +), CAediting_1411384(26083809, +), CAediting_1411385(26083943, +), CAediting_1411386(26084013, +),

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RNA editing positional annotations for FAM182A using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_1411352	chr20_26083485_+	ncRNA_exonic
CAediting_1411353	chr20_26083493_+	ncRNA_exonic
CAediting_1411354	chr20_26083550_+	ncRNA_exonic
CAediting_1411355	chr20_26083571_+	ncRNA_exonic
CAediting_1411356	chr20_26083600_+	ncRNA_exonic
CAediting_1411357	chr20_26083615_+	ncRNA_exonic
CAediting_1411358	chr20_26083616_+	ncRNA_exonic
CAediting_1411359	chr20_26083619_+	ncRNA_exonic
CAediting_1411360	chr20_26083620_+	ncRNA_exonic
CAediting_1411361	chr20_26083622_+	ncRNA_exonic
CAediting_1411362	chr20_26083625_+	ncRNA_exonic
CAediting_1411363	chr20_26083634_+	ncRNA_exonic
CAediting_1411364	chr20_26083640_+	ncRNA_exonic
CAediting_1411365	chr20_26083644_+	ncRNA_exonic
CAediting_1411366	chr20_26083659_+	ncRNA_exonic
CAediting_1411367	chr20_26083662_+	ncRNA_exonic
CAediting_1411368	chr20_26083672_+	ncRNA_exonic
CAediting_1411369	chr20_26083687_+	ncRNA_exonic
CAediting_1411370	chr20_26083698_+	ncRNA_exonic
CAediting_1411371	chr20_26083699_+	ncRNA_exonic
CAediting_1411372	chr20_26083705_+	ncRNA_exonic
CAediting_1411373	chr20_26083713_+	ncRNA_exonic
CAediting_1411374	chr20_26083717_+	ncRNA_exonic
CAediting_1411375	chr20_26083724_+	ncRNA_exonic
CAediting_1411376	chr20_26083735_+	ncRNA_exonic
CAediting_1411377	chr20_26083742_+	ncRNA_exonic
CAediting_1411378	chr20_26083753_+	ncRNA_exonic
CAediting_1411379	chr20_26083764_+	ncRNA_exonic
CAediting_1411380	chr20_26083768_+	ncRNA_exonic
CAediting_1411381	chr20_26083779_+	ncRNA_exonic
CAediting_1411382	chr20_26083791_+	ncRNA_exonic
CAediting_1411383	chr20_26083802_+	ncRNA_exonic
CAediting_1411384	chr20_26083809_+	ncRNA_exonic
CAediting_1411385	chr20_26083943_+	ncRNA_exonic
CAediting_1411386	chr20_26084013_+	ncRNA_exonic

Repat-regional RNA editing(s).

CAeditome ID

Position

Repeat family

Repeat sub family

Repeat name

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RNA A-to-I editing events in the alternative splicing sites for FAM182A

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000125804.12.FAM182A.

Correlation between RNA A-to-I editing and PSI for ENSG00000125804.12.FAM182A.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for FAM182A

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for FAM182A

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for FAM182A

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1411352	chr20_26083485_+	ENSG00000125804.12	ENST00000376398.5	hsa-miR-10398-3p	26083481	26083487	7mer-m8	26083464	26083488	144	-31.04
CAediting_1411352	chr20_26083485_+	ENSG00000125804.12	ENST00000376398.5	hsa-miR-3940-3p	26083483	26083489	7mer-m8	26083469	26083490	145	-19.23
CAediting_1411354	chr20_26083550_+	ENSG00000125804.12	ENST00000376398.5	hsa-miR-6784-5p	26083545	26083551	7mer-m8	26083534	26083552	151	-26.03
CAediting_1411355	chr20_26083571_+	ENSG00000125804.12	ENST00000376398.5	hsa-miR-516b-5p	26083566	26083572	7mer-m8	26083552	26083573	140	-14.96
CAediting_1411356	chr20_26083600_+	ENSG00000125804.12	ENST00000376398.5	hsa-miR-6765-3p	26083594	26083600	7mer-m8	26083578	26083601	143	-20.79
CAediting_1411357	chr20_26083615_+	ENSG00000125804.12	ENST00000376398.5	hsa-miR-378j	26083609	26083616	8mer-1a	26083598	26083616	144	-12.4
CAediting_1411357	chr20_26083615_+	ENSG00000125804.12	ENST00000376398.5	hsa-miR-4782-5p	26083610	26083616	7mer-m8	26083595	26083617	151	-11.61
CAediting_1411357	chr20_26083615_+	ENSG00000125804.12	ENST00000376398.5	hsa-miR-5706	26083610	26083616	7mer-m8	26083594	26083617	147	-14.78
CAediting_1411357	chr20_26083615_+	ENSG00000125804.12	ENST00000376398.5	hsa-miR-6839-5p	26083609	26083616	8mer-1a	26083595	26083616	156	-16.67
CAediting_1411358	chr20_26083616_+	ENSG00000125804.12	ENST00000376398.5	hsa-miR-890	26083611	26083617	7mer-m8	26083598	26083618	140	-10.92
CAediting_1411362	chr20_26083625_+	ENSG00000125804.12	ENST00000376398.5	hsa-miR-1538	26083623	26083629	7mer-m8	26083610	26083630	148	-17.56
CAediting_1411362	chr20_26083625_+	ENSG00000125804.12	ENST00000376398.5	hsa-miR-4745-3p	26083623	26083629	7mer-m8	26083608	26083630	142	-19.53
CAediting_1411362	chr20_26083625_+	ENSG00000125804.12	ENST00000376398.5	hsa-miR-4783-3p	26083621	26083627	7mer-m8	26083606	26083628	156	-23.78
CAediting_1411363	chr20_26083634_+	ENSG00000125804.12	ENST00000376398.5	hsa-miR-6765-3p	26083630	26083636	7mer-m8	26083619	26083637	149	-22.14
CAediting_1411363	chr20_26083634_+	ENSG00000125804.12	ENST00000376398.5	hsa-miR-6852-5p	26083628	26083634	7mer-m8	26083616	26083635	147	-21.95
CAediting_1411363	chr20_26083634_+	ENSG00000125804.12	ENST00000376398.5	hsa-miR-7851-3p	26083629	26083635	7mer-m8	26083616	26083636	162	-28.19
CAediting_1411364	chr20_26083640_+	ENSG00000125804.12	ENST00000376398.5	hsa-miR-4486	26083639	26083645	7mer-m8	26083628	26083646	142	-21.8
CAediting_1411365	chr20_26083644_+	ENSG00000125804.12	ENST00000376398.5	hsa-miR-1538	26083642	26083648	7mer-m8	26083626	26083649	150	-24.15
CAediting_1411365	chr20_26083644_+	ENSG00000125804.12	ENST00000376398.5	hsa-miR-4745-3p	26083642	26083648	7mer-m8	26083625	26083649	142	-28.37
CAediting_1411365	chr20_26083644_+	ENSG00000125804.12	ENST00000376398.5	hsa-miR-4747-3p	26083643	26083649	7mer-m8	26083629	26083650	162	-26.39
CAediting_1411368	chr20_26083672_+	ENSG00000125804.12	ENST00000376398.5	hsa-miR-2276-5p	26083668	26083674	7mer-m8	26083655	26083675	146	-17.94
CAediting_1411369	chr20_26083687_+	ENSG00000125804.12	ENST00000376398.5	hsa-miR-615-3p	26083681	26083687	7mer-m8	26083668	26083688	154	-26.26
CAediting_1411371	chr20_26083699_+	ENSG00000125804.12	ENST00000376398.5	hsa-miR-2861	26083697	26083703	7mer-m8	26083686	26083704	143	-23.01
CAediting_1411372	chr20_26083705_+	ENSG00000125804.12	ENST00000376398.5	hsa-miR-4508	26083699	26083705	7mer-m8	26083690	26083706	145	-17.9
CAediting_1411372	chr20_26083705_+	ENSG00000125804.12	ENST00000376398.5	hsa-miR-6784-5p	26083700	26083706	7mer-m8	26083688	26083707	155	-24.46
CAediting_1411377	chr20_26083742_+	ENSG00000125804.12	ENST00000376398.5	hsa-miR-10396a-5p	26083737	26083743	7mer-m8	26083725	26083744	148	-25.29
CAediting_1411377	chr20_26083742_+	ENSG00000125804.12	ENST00000376398.5	hsa-miR-4781-5p	26083738	26083744	7mer-m8	26083727	26083745	148	-18.82
CAediting_1411377	chr20_26083742_+	ENSG00000125804.12	ENST00000376398.5	hsa-miR-744-5p	26083737	26083743	7mer-m8	26083723	26083744	144	-21.84
CAediting_1411379	chr20_26083764_+	ENSG00000125804.12	ENST00000376398.5	hsa-miR-500b-3p	26083758	26083764	7mer-m8	26083745	26083765	149	-18.97
CAediting_1411380	chr20_26083768_+	ENSG00000125804.12	ENST00000376398.5	hsa-miR-3910	26083766	26083772	7mer-m8	26083754	26083773	153	-16.16
CAediting_1411383	chr20_26083802_+	ENSG00000125804.12	ENST00000376398.5	hsa-miR-6787-3p	26083798	26083804	7mer-m8	26083784	26083805	142	-14.11
CAediting_1411385	chr20_26083943_+	ENSG00000125804.12	ENST00000376398.5	hsa-miR-659-5p	26083941	26083947	7mer-m8	26083927	26083948	140	-16.71
CAediting_1411360	chr20_26083620_+	ENSG00000125804.12	ENST00000376398.5	hsa-miR-29a-5p	26083614	26083620	7mer-m8	26083598	26083621	154	-12.31

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1411354	chr20_26083550_+	ENSG00000125804.12	ENST00000376398.5	hsa-miR-1227-5p	26083544	26083550	7mer-m8	26083535	26083551	150	-21.12
CAediting_1411377	chr20_26083742_+	ENSG00000125804.12	ENST00000376398.5	hsa-miR-1227-5p	26083736	26083742	7mer-m8	26083727	26083743	143	-19.89
CAediting_1411368	chr20_26083672_+	ENSG00000125804.12	ENST00000376398.5	hsa-miR-1237-3p	26083668	26083674	7mer-m8	26083650	26083675	149	-23.35
CAediting_1411382	chr20_26083791_+	ENSG00000125804.12	ENST00000376398.5	hsa-miR-1243	26083787	26083793	7mer-m8	26083774	26083794	150	-16.91
CAediting_1411377	chr20_26083742_+	ENSG00000125804.12	ENST00000376398.5	hsa-miR-1296-3p	26083738	26083744	7mer-m8	26083723	26083745	152	-24.52
CAediting_1411363	chr20_26083634_+	ENSG00000125804.12	ENST00000376398.5	hsa-miR-1298-3p	26083629	26083635	7mer-m8	26083616	26083636	140	-20.24
CAediting_1411362	chr20_26083625_+	ENSG00000125804.12	ENST00000376398.5	hsa-miR-2861	26083624	26083630	7mer-m8	26083613	26083631	155	-25.7
CAediting_1411376	chr20_26083735_+	ENSG00000125804.12	ENST00000376398.5	hsa-miR-2861	26083734	26083740	7mer-m8	26083723	26083741	141	-21.1
CAediting_1411352	chr20_26083485_+	ENSG00000125804.12	ENST00000376398.5	hsa-miR-3116	26083482	26083488	7mer-m8	26083465	26083489	141	-22.62
CAediting_1411377	chr20_26083742_+	ENSG00000125804.12	ENST00000376398.5	hsa-miR-3151-5p	26083737	26083743	7mer-m8	26083725	26083744	151	-20.8
CAediting_1411368	chr20_26083672_+	ENSG00000125804.12	ENST00000376398.5	hsa-miR-3182	26083668	26083673	6mer	26083658	26083674	141	-15.11
CAediting_1411378	chr20_26083753_+	ENSG00000125804.12	ENST00000376398.5	hsa-miR-3199	26083752	26083758	7mer-m8	26083737	26083759	145	-18.16
CAediting_1411373	chr20_26083713_+	ENSG00000125804.12	ENST00000376398.5	hsa-miR-331-5p	26083711	26083717	7mer-m8	26083697	26083718	152	-21.61
CAediting_1411374	chr20_26083717_+	ENSG00000125804.12	ENST00000376398.5	hsa-miR-331-5p	26083711	26083717	7mer-m8	26083697	26083718	152	-21.61
CAediting_1411381	chr20_26083779_+	ENSG00000125804.12	ENST00000376398.5	hsa-miR-3622a-3p	26083777	26083783	7mer-m8	26083763	26083784	140	-15.47
CAediting_1411381	chr20_26083779_+	ENSG00000125804.12	ENST00000376398.5	hsa-miR-3622b-3p	26083777	26083783	7mer-m8	26083764	26083784	148	-19.95
CAediting_1411364	chr20_26083640_+	ENSG00000125804.12	ENST00000376398.5	hsa-miR-3912-5p	26083634	26083640	7mer-m8	26083622	26083641	144	-16.67
CAediting_1411384	chr20_26083809_+	ENSG00000125804.12	ENST00000376398.5	hsa-miR-4293	26083807	26083813	7mer-m8	26083798	26083814	140	-11.26
CAediting_1411353	chr20_26083493_+	ENSG00000125804.12	ENST00000376398.5	hsa-miR-4436b-5p	26083492	26083498	7mer-m8	26083477	26083499	150	-22.39
CAediting_1411381	chr20_26083779_+	ENSG00000125804.12	ENST00000376398.5	hsa-miR-4649-3p	26083774	26083780	7mer-m8	26083759	26083781	150	-26.14
CAediting_1411377	chr20_26083742_+	ENSG00000125804.12	ENST00000376398.5	hsa-miR-4796-3p	26083740	26083746	7mer-m8	26083724	26083747	145	-15.29
CAediting_1411357	chr20_26083615_+	ENSG00000125804.12	ENST00000376398.5	hsa-miR-5004-3p	26083609	26083616	8mer-1a	26083595	26083616	146	-14.32
CAediting_1411377	chr20_26083742_+	ENSG00000125804.12	ENST00000376398.5	hsa-miR-520g-3p	26083741	26083748	8mer-1a	26083725	26083748	142	-11.11
CAediting_1411377	chr20_26083742_+	ENSG00000125804.12	ENST00000376398.5	hsa-miR-520h	26083741	26083748	8mer-1a	26083727	26083748	142	-11.11
CAediting_1411368	chr20_26083672_+	ENSG00000125804.12	ENST00000376398.5	hsa-miR-544a	26083666	26083672	7mer-m8	26083652	26083673	150	-10.14
CAediting_1411381	chr20_26083779_+	ENSG00000125804.12	ENST00000376398.5	hsa-miR-544b	26083775	26083781	7mer-m8	26083762	26083782	150	-20.07
CAediting_1411367	chr20_26083662_+	ENSG00000125804.12	ENST00000376398.5	hsa-miR-622	26083661	26083667	7mer-m8	26083648	26083668	147	-13.54
CAediting_1411352	chr20_26083485_+	ENSG00000125804.12	ENST00000376398.5	hsa-miR-661	26083483	26083488	6mer	26083466	26083489	141	-21.11
CAediting_1411365	chr20_26083644_+	ENSG00000125804.12	ENST00000376398.5	hsa-miR-6742-3p	26083640	26083646	7mer-m8	26083630	26083647	154	-22.49
CAediting_1411377	chr20_26083742_+	ENSG00000125804.12	ENST00000376398.5	hsa-miR-6742-5p	26083738	26083743	6mer	26083721	26083744	143	-26.85
CAediting_1411354	chr20_26083550_+	ENSG00000125804.12	ENST00000376398.5	hsa-miR-6765-3p	26083548	26083555	8mer-1a	26083537	26083555	149	-22.48
CAediting_1411364	chr20_26083640_+	ENSG00000125804.12	ENST00000376398.5	hsa-miR-6776-5p	26083639	26083645	7mer-m8	26083626	26083646	152	-26.54
CAediting_1411365	chr20_26083644_+	ENSG00000125804.12	ENST00000376398.5	hsa-miR-6776-5p	26083639	26083645	7mer-m8	26083626	26083646	152	-26.54
CAediting_1411375	chr20_26083724_+	ENSG00000125804.12	ENST00000376398.5	hsa-miR-6852-5p	26083720	26083726	7mer-m8	26083709	26083727	144	-21.42
CAediting_1411375	chr20_26083724_+	ENSG00000125804.12	ENST00000376398.5	hsa-miR-6857-5p	26083719	26083724	6mer	26083704	26083725	145	-27.69
CAediting_1411386	chr20_26084013_+	ENSG00000125804.12	ENST00000376398.5	hsa-miR-7152-3p	26084008	26084015	8mer-1a	26083992	26084015	149	-28.1
CAediting_1411354	chr20_26083550_+	ENSG00000125804.12	ENST00000376398.5	hsa-miR-7155-5p	26083546	26083551	6mer	26083533	26083552	140	-25.94
CAediting_1411354	chr20_26083550_+	ENSG00000125804.12	ENST00000376398.5	hsa-miR-7851-3p	26083547	26083553	7mer-m8	26083534	26083554	148	-21.2
CAediting_1411361	chr20_26083622_+	ENSG00000125804.12	ENST00000376398.5	hsa-miR-7978	26083620	26083626	7mer-m8	26083609	26083627	141	-13.62
CAediting_1411362	chr20_26083625_+	ENSG00000125804.12	ENST00000376398.5	hsa-miR-7978	26083620	26083626	7mer-m8	26083609	26083627	141	-13.62
CAediting_1411378	chr20_26083753_+	ENSG00000125804.12	ENST00000376398.5	hsa-miR-7978	26083748	26083754	7mer-m8	26083734	26083755	150	-15.93
CAediting_1411378	chr20_26083753_+	ENSG00000125804.12	ENST00000376398.5	hsa-miR-8052	26083752	26083758	7mer-m8	26083731	26083759	146	-20.98
CAediting_1411385	chr20_26083943_+	ENSG00000125804.12	ENST00000376398.5	hsa-miR-8083	26083942	26083948	7mer-m8	26083929	26083949	143	-14.65
CAediting_1411382	chr20_26083791_+	ENSG00000125804.12	ENST00000376398.5	hsa-miR-873-3p	26083790	26083796	7mer-m8	26083775	26083797	147	-20.64

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_748296	chr10_51299626_+	ENSG00000125804.12	ENST00000376398.5	hsa-miR-605-3p	26086585	26086591	7mer-m8	26086570	26086592	158	-17.93
CAediting_1054808	chr15_66496985_-	ENSG00000125804.12	ENST00000376398.5	hsa-miR-4512	26083543	26083550	8mer-1a	26083526	26083550	142	-24.25
CAediting_1054808	chr15_66496985_-	ENSG00000125804.12	ENST00000376398.5	hsa-miR-4512	26083625	26083632	8mer-1a	26083611	26083632	140	-16.21
CAediting_1054808	chr15_66496985_-	ENSG00000125804.12	ENST00000376398.5	hsa-miR-4512	26083735	26083742	8mer-1a	26083723	26083742	152	-21.89
CAediting_1229415	chr17_67471547_+	ENSG00000125804.12	ENST00000376398.5	hsa-miR-548aa	26086451	26086457	7mer-m8	26086434	26086458	140	-15.34
CAediting_86358	chr1_109598906_+	ENSG00000125804.12	ENST00000376398.5	hsa-miR-197-5p	26085245	26085252	8mer-1a	26085230	26085252	142	-23.33
CAediting_86358	chr1_109598906_+	ENSG00000125804.12	ENST00000376398.5	hsa-miR-197-5p	26085355	26085362	8mer-1a	26085338	26085362	147	-26.7
CAediting_86358	chr1_109598906_+	ENSG00000125804.12	ENST00000376398.5	hsa-miR-197-5p	26085373	26085379	7mer-m8	26085356	26085380	147	-32.3
CAediting_86358	chr1_109598906_+	ENSG00000125804.12	ENST00000376398.5	hsa-miR-197-5p	26086210	26086217	8mer-1a	26086194	26086217	159	-26.54
CAediting_86358	chr1_109598906_+	ENSG00000125804.12	ENST00000376398.5	hsa-miR-197-5p	26068948	26068954	7mer-m8	26068933	26068955	140	-18.01
CAediting_77128	chr1_85133844_+	ENSG00000125804.12	ENST00000376398.5	hsa-miR-4423-3p	26085406	26085412	7mer-m8	26085393	26085413	140	-14.27
CAediting_77128	chr1_85133844_+	ENSG00000125804.12	ENST00000376398.5	hsa-miR-4423-3p	26081273	26081279	7mer-m8	26081260	26081280	145	-18.62
CAediting_396018	chr5_1062918_-	ENSG00000125804.12	ENST00000376398.5	hsa-miR-4635	26085651	26085657	7mer-m8	26085638	26085658	146	-14.68
CAediting_604450	chr7_133034877_-	ENSG00000125804.12	ENST00000376398.5	hsa-miR-3654	26084017	26084023	7mer-m8	26084007	26084024	148	-19.75
CAediting_524911	chr7_5495852_-	ENSG00000125804.12	ENST00000376398.5	hsa-miR-589-3p	26054785	26054792	8mer-1a	26054768	26054792	153	-18.56

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_604450	chr7_133034877_-	ENSG00000125804.12	ENST00000376398.5	hsa-miR-3654	26084312	26084318	7mer-m8	26084301	26084319	140	-14.44
CAediting_604450	chr7_133034877_-	ENSG00000125804.12	ENST00000376398.5	hsa-miR-3654	26085657	26085663	7mer-m8	26085649	26085664	145	-18.73
CAediting_77128	chr1_85133844_+	ENSG00000125804.12	ENST00000376398.5	hsa-miR-4423-3p	26084889	26084896	8mer-1a	26084876	26084896	150	-16.83
CAediting_1054808	chr15_66496985_-	ENSG00000125804.12	ENST00000376398.5	hsa-miR-4512	26083465	26083472	8mer-1a	26083453	26083472	153	-21.3
CAediting_1054808	chr15_66496985_-	ENSG00000125804.12	ENST00000376398.5	hsa-miR-4512	26083826	26083833	8mer-1a	26083812	26083833	140	-19.51
CAediting_524911	chr7_5495852_-	ENSG00000125804.12	ENST00000376398.5	hsa-miR-589-3p	26086861	26086867	7mer-m8	26086841	26086868	155	-20.43
CAediting_1351755	chr19_40282625_-	ENSG00000125804.12	ENST00000376398.5	hsa-miR-641	26084988	26084994	7mer-m8	26084972	26084995	140	-17.56
CAediting_580943	chr7_100356700_+	ENSG00000125804.12	ENST00000376398.5	hsa-miR-6840-3p	26084994	26085000	7mer-m8	26084980	26085001	141	-16.1
CAediting_580943	chr7_100356700_+	ENSG00000125804.12	ENST00000376398.5	hsa-miR-6840-3p	26085722	26085728	7mer-m8	26085708	26085729	140	-17.24
CAediting_468389	chr6_31355314_-	ENSG00000125804.12	ENST00000376398.5	hsa-miR-6891-5p	26069052	26069058	7mer-m8	26069041	26069059	145	-19.57

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for FAM182A

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST

ENST type

RNA structure without RNA A-to-I editing.

RNA structure with RNA A-to-I editing.

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID

ENST

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

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Relation with ADAR for FAM182A

Correlation between ADAR gene expression and RNA editing frequency

Cancer	CAeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
LGG	CAediting_1411368	chr20_26083672_+	0.0290570241027968	0.197693972695403	.	.	0.000295045884459979	0.322235529646475
LGG	CAediting_1411371	chr20_26083699_+	0.00816357374285937	0.240438687697677	.	.	.	.

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Relation with cancer stages for FAM182A

Correlation between Cancer stages and RNA editing frequency

Cancer

Stage_type

CAeditomID

position

P-val

Coeff.

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Relation with survival for FAM182A

Correlation between RNA editing and survival

Cancer	CAeditomID	position	KMpvalue	Coxpvalue	CoxHR
LGG	CAediting_1411358	chr20_26083616_+	0.0347679867069446	0.0385322	0.00215713
LGG	CAediting_1411376	chr20_26083735_+	0.022064594737201	0.0409509	654.915

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RelatedDrugs for FAM182A

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for FAM182A

Diseases associated with this gene.
(DisGeNet 7.0)

Gene

Disease ID

Disease name

# pubmeds

Source

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene