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![]() | Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples |
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![]() | The effects of the RNA editing to the stability of the RNA structures |
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Editing gene: ZNF575 (CAeditome ID:284346) |
Gene summary for ZNF575 |
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Gene information | Gene symbol | ZNF575 | Gene ID | 284346 |
Gene name | zinc finger protein 575 | |
Synonyms | - | |
Cytomap | 19q13.31 | |
Type of gene | protein-coding | |
Description | zinc finger protein 575 | |
Modification date | 20210519 | |
UniProtAcc | Q86XF7 | |
Context |
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Gene | GO ID | GO term | PubMed ID |
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RNA A-to-I events for ZNF575 |
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CAediting_1358329(43529679, +), CAediting_1358330(43531817, +), CAediting_1358331(43531837, +), CAediting_1358332(43531844, +), |
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RNA editing positional annotations for ZNF575 using Annovar |
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CAeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
CAediting_1358330 | chr19_43531817_+ | nonsynonymous SNV | ENST00000458714.2 | c.A148G | p.T50A | D | B | N |
CAediting_1358332 | chr19_43531844_+ | nonsynonymous SNV | ENST00000458714.2 | c.A175G | p.N59D | D | B | N |
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CAeditome ID | Position | Variant type |
CAediting_1358329 | chr19_43529679_+ | intronic |
CAediting_1358330 | chr19_43531817_+ | exonic |
CAediting_1358331 | chr19_43531837_+ | exonic |
CAediting_1358332 | chr19_43531844_+ | exonic |
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CAeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
CAediting_1358329 | chr19_43529679_+ | SINE | Alu | AluY |
CAediting_1358330 | chr19_43531817_+ | SINE | Alu | AluJo |
CAediting_1358331 | chr19_43531837_+ | SINE | Alu | AluJo |
CAediting_1358332 | chr19_43531844_+ | SINE | Alu | AluJo |
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RNA A-to-I editing events in the alternative splicing sites for ZNF575 |
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AStype | CAeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
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Differntial gene expression between RNA A-to-I edited versus non-edited samples for ZNF575 |
![]() * The grey color means N/A. |
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Protein coding region RNA A-to-I editings for ZNF575 |
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The effects of the RNA editing to the miRNA binding sites for ZNF575 |
**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page. |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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The effects of the RNA editing to the stability of the RNA structures for ZNF575 |
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ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
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CAeditom_ID | ENST | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
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Relation with ADAR for ZNF575 |
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Cancer | CAeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
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Relation with cancer stages for ZNF575 |
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Cancer | Stage_type | CAeditomID | position | P-val | Coeff. |
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Relation with survival for ZNF575 |
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Cancer | CAeditomID | position | KMpvalue | Coxpvalue | CoxHR |
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RelatedDrugs for ZNF575 |
![]() (DrugBank Version 5.1.8 2021-01-03) |
Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for ZNF575 |
![]() (DisGeNet 7.0) |
Gene | Disease ID | Disease name | # pubmeds | Source |