|
Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples | |
The effects of the RNA editing to the stability of the RNA structures | |
Editing gene: TTC9C (CAeditome ID:283237) |
Gene summary for TTC9C |
Gene summary |
Gene information | Gene symbol | TTC9C | Gene ID | 283237 |
Gene name | tetratricopeptide repeat domain 9C | |
Synonyms | - | |
Cytomap | 11q12.3 | |
Type of gene | protein-coding | |
Description | tetratricopeptide repeat protein 9CTPR repeat protein 9C | |
Modification date | 20210518 | |
UniProtAcc | Q8N5M4 | |
Context |
Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Gene | GO ID | GO term | PubMed ID |
Top |
RNA A-to-I events for TTC9C |
RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure. |
RNA editing frequencies across 33 cancers of gene: ENSG00000162222.12 |
RNA A-to-I editing events in Cancer. |
CAediting_818971(62730137, +), CAediting_818972(62730156, +), CAediting_818973(62730175, +), CAediting_818974(62730214, +), CAediting_818975(62730230, +), CAediting_818976(62730262, +), CAediting_818977(62730337, +), CAediting_818978(62730349, +), CAediting_818979(62730677, +), CAediting_818980(62730703, +), CAediting_818981(62730793, +), CAediting_818982(62731069, +), CAediting_818983(62731072, +), CAediting_818984(62731098, +), CAediting_818985(62731110, +), CAediting_818986(62731151, +), CAediting_818987(62731356, +), CAediting_818988(62731358, +), CAediting_818989(62731365, +), CAediting_818990(62731370, +), CAediting_818991(62731395, +), CAediting_818992(62731409, +), CAediting_818993(62731434, +), CAediting_818994(62731435, +), CAediting_818995(62731436, +), CAediting_818996(62731437, +), CAediting_818997(62731438, +), CAediting_818998(62731450, +), CAediting_818999(62731458, +), CAediting_819000(62731476, +), CAediting_819001(62731517, +), CAediting_819002(62731538, +), CAediting_819003(62731546, +), CAediting_819004(62731547, +), CAediting_819005(62731557, +), CAediting_819006(62731759, +), CAediting_819007(62731764, +), CAediting_819008(62731765, +), CAediting_819009(62731821, +), CAediting_819010(62731920, +), CAediting_819011(62732489, +), CAediting_819012(62732490, +), CAediting_819013(62732560, +), CAediting_819014(62732665, +), CAediting_819015(62732696, +), CAediting_819016(62732742, +), CAediting_819017(62732772, +), CAediting_819018(62732819, +), CAediting_819019(62732879, +), CAediting_819020(62733622, +), CAediting_819021(62733937, +), CAediting_819022(62733941, +), CAediting_819023(62734195, +), CAediting_819024(62734328, +), CAediting_819025(62734536, +), CAediting_819026(62734692, +), CAediting_819027(62734730, +), CAediting_819028(62734751, +), CAediting_819029(62734757, +), CAediting_819030(62734759, +), CAediting_819031(62734919, +), CAediting_819032(62734927, +), CAediting_819033(62734958, +), CAediting_819034(62734990, +), CAediting_819035(62735036, +), CAediting_819036(62735069, +), CAediting_819037(62735103, +), CAediting_819038(62735109, +), CAediting_819039(62735156, +), CAediting_819040(62736143, +), CAediting_819041(62736149, +), CAediting_819042(62736158, +), CAediting_819043(62736268, +), CAediting_819044(62736286, +), CAediting_819045(62736287, +), CAediting_819046(62736303, +), CAediting_819047(62736340, +), CAediting_819048(62736547, +), CAediting_819049(62736669, +), CAediting_819050(62736735, +), CAediting_819051(62736736, +), CAediting_819052(62736745, +), CAediting_819053(62736749, +), CAediting_819054(62737125, +), CAediting_819055(62737777, +), CAediting_819056(62737885, +), CAediting_819057(62737889, +), CAediting_819058(62738827, +), CAediting_819059(62738835, +), CAediting_819060(62738836, +), CAediting_819061(62738858, +), CAediting_819062(62738871, +), CAediting_819063(62738876, +), CAediting_819064(62738884, +), CAediting_819065(62738890, +), CAediting_819066(62738895, +), CAediting_819067(62738904, +), CAediting_819068(62738905, +), CAediting_819069(62738907, +), CAediting_819070(62738913, +), CAediting_819071(62738914, +), CAediting_819072(62738915, +), CAediting_819073(62738926, +), CAediting_819074(62738929, +), CAediting_819075(62738932, +), CAediting_819076(62738935, +), CAediting_819077(62738938, +), CAediting_819078(62738939, +), CAediting_819079(62738940, +), CAediting_819080(62738944, +), CAediting_819081(62738952, +), CAediting_819082(62738953, +), CAediting_819083(62738955, +), CAediting_819084(62738958, +), CAediting_819085(62738960, +), CAediting_819086(62738976, +), CAediting_819087(62738980, +), CAediting_819088(62739018, +), CAediting_819089(62739028, +), CAediting_819090(62739036, +), CAediting_819091(62739037, +), CAediting_819092(62739045, +), CAediting_819093(62739052, +), CAediting_819094(62739053, +), CAediting_819095(62739063, +), CAediting_819096(62739065, +), CAediting_819097(62739067, +), CAediting_819098(62739069, +), CAediting_819099(62739071, +), CAediting_819100(62739075, +), CAediting_819101(62739081, +), CAediting_819102(62739086, +), CAediting_819103(62739089, +), CAediting_819104(62739094, +), CAediting_819105(62739095, +), CAediting_819106(62739114, +), CAediting_819107(62739134, +), CAediting_819108(62739135, +), CAediting_819109(62739136, +), CAediting_819110(62739143, +), CAediting_819111(62739156, +), CAediting_819112(62739166, +), CAediting_819113(62739175, +), CAediting_819114(62739180, +), CAediting_819115(62739183, +), CAediting_819116(62739197, +), CAediting_819117(62739201, +), CAediting_819118(62739205, +), CAediting_819119(62739218, +), CAediting_819120(62739242, +), CAediting_819121(62739263, +), CAediting_819122(62739266, +), CAediting_819123(62739267, +), CAediting_819124(62739272, +), CAediting_819125(62739282, +), CAediting_819126(62739308, +), CAediting_819127(62739314, +), CAediting_819128(62739318, +), CAediting_819129(62739331, +), CAediting_819130(62739341, +), CAediting_819131(62739346, +), CAediting_819132(62739349, +), CAediting_819133(62739350, +), CAediting_819134(62739384, +), CAediting_819135(62739399, +), CAediting_819136(62739409, +), CAediting_819137(62739411, +), CAediting_819138(62739417, +), CAediting_819139(62739448, +), CAediting_819140(62739449, +), CAediting_819141(62739454, +), CAediting_819142(62739463, +), CAediting_819143(62739477, +), CAediting_819144(62739483, +), CAediting_819145(62739487, +), CAediting_819146(62739494, +), CAediting_819147(62739499, +), CAediting_819148(62739500, +), CAediting_819149(62739518, +), CAediting_819150(62739519, +), CAediting_819151(62739530, +), CAediting_819152(62739548, +), CAediting_819153(62739580, +), CAediting_819154(62739582, +), CAediting_819155(62739586, +), CAediting_819156(62739595, +), CAediting_819157(62739596, +), CAediting_819158(62739598, +), CAediting_819159(62739599, +), CAediting_819160(62739600, +), CAediting_819161(62739603, +), CAediting_819162(62739642, +), CAediting_819163(62739644, +), CAediting_819164(62739646, +), CAediting_819165(62739648, +), CAediting_819166(62739654, +), CAediting_819167(62739673, +), CAediting_819168(62739687, +), CAediting_819169(62739697, +), CAediting_819170(62739702, +), CAediting_819171(62739703, +), CAediting_819172(62739716, +), CAediting_819173(62739722, +), CAediting_819174(62739723, +), CAediting_819175(62739727, +), CAediting_819176(62739740, +), CAediting_819177(62739744, +), CAediting_819178(62739748, +), CAediting_819179(62739749, +), CAediting_819180(62739759, +), CAediting_819181(62739762, +), CAediting_819182(62739764, +), CAediting_819183(62739768, +), CAediting_819184(62739775, +), CAediting_819185(62739778, +), CAediting_819186(62739788, +), CAediting_819187(62739789, +), CAediting_819188(62739799, +), CAediting_819189(62739810, +), CAediting_819190(62739813, +), CAediting_819191(62739815, +), CAediting_819192(62739817, +), CAediting_819193(62739819, +), CAediting_819194(62739830, +), CAediting_819195(62739839, +), CAediting_819196(62739864, +), CAediting_819197(62739869, +), CAediting_819198(62739873, +), CAediting_819199(62739889, +), CAediting_819200(62739890, +), CAediting_819201(62739891, +), CAediting_819202(62739903, +), CAediting_819203(62739905, +), CAediting_819204(62739912, +), CAediting_819205(62739919, +), CAediting_819206(62739980, +), CAediting_819207(62739998, +), |
Top |
RNA editing positional annotations for TTC9C using Annovar |
Protein coding RNA editing(s). |
CAeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
Gene structure information of RNA editing(s). |
CAeditome ID | Position | Variant type |
CAediting_818971 | chr11_62730137_+ | intronic |
CAediting_818972 | chr11_62730156_+ | intronic |
CAediting_818973 | chr11_62730175_+ | intronic |
CAediting_818974 | chr11_62730214_+ | intronic |
CAediting_818975 | chr11_62730230_+ | intronic |
CAediting_818976 | chr11_62730262_+ | intronic |
CAediting_818977 | chr11_62730337_+ | intronic |
CAediting_818978 | chr11_62730349_+ | intronic |
CAediting_818979 | chr11_62730677_+ | intronic |
CAediting_818980 | chr11_62730703_+ | intronic |
CAediting_818981 | chr11_62730793_+ | intronic |
CAediting_818982 | chr11_62731069_+ | intronic |
CAediting_818983 | chr11_62731072_+ | intronic |
CAediting_818984 | chr11_62731098_+ | intronic |
CAediting_818985 | chr11_62731110_+ | intronic |
CAediting_818986 | chr11_62731151_+ | intronic |
CAediting_818987 | chr11_62731356_+ | intronic |
CAediting_818988 | chr11_62731358_+ | intronic |
CAediting_818989 | chr11_62731365_+ | intronic |
CAediting_818990 | chr11_62731370_+ | intronic |
CAediting_818991 | chr11_62731395_+ | intronic |
CAediting_818992 | chr11_62731409_+ | intronic |
CAediting_818993 | chr11_62731434_+ | intronic |
CAediting_818994 | chr11_62731435_+ | intronic |
CAediting_818995 | chr11_62731436_+ | intronic |
CAediting_818996 | chr11_62731437_+ | intronic |
CAediting_818997 | chr11_62731438_+ | intronic |
CAediting_818998 | chr11_62731450_+ | intronic |
CAediting_818999 | chr11_62731458_+ | intronic |
CAediting_819000 | chr11_62731476_+ | intronic |
CAediting_819001 | chr11_62731517_+ | intronic |
CAediting_819002 | chr11_62731538_+ | intronic |
CAediting_819003 | chr11_62731546_+ | intronic |
CAediting_819004 | chr11_62731547_+ | intronic |
CAediting_819005 | chr11_62731557_+ | intronic |
CAediting_819006 | chr11_62731759_+ | intronic |
CAediting_819007 | chr11_62731764_+ | intronic |
CAediting_819008 | chr11_62731765_+ | intronic |
CAediting_819009 | chr11_62731821_+ | intronic |
CAediting_819010 | chr11_62731920_+ | intronic |
CAediting_819011 | chr11_62732489_+ | intronic |
CAediting_819012 | chr11_62732490_+ | intronic |
CAediting_819013 | chr11_62732560_+ | intronic |
CAediting_819014 | chr11_62732665_+ | intronic |
CAediting_819015 | chr11_62732696_+ | intronic |
CAediting_819016 | chr11_62732742_+ | intronic |
CAediting_819017 | chr11_62732772_+ | intronic |
CAediting_819018 | chr11_62732819_+ | intronic |
CAediting_819019 | chr11_62732879_+ | intronic |
CAediting_819020 | chr11_62733622_+ | intronic |
CAediting_819021 | chr11_62733937_+ | intronic |
CAediting_819022 | chr11_62733941_+ | intronic |
CAediting_819023 | chr11_62734195_+ | intronic |
CAediting_819024 | chr11_62734328_+ | intronic |
CAediting_819025 | chr11_62734536_+ | intronic |
CAediting_819026 | chr11_62734692_+ | intronic |
CAediting_819027 | chr11_62734730_+ | intronic |
CAediting_819028 | chr11_62734751_+ | intronic |
CAediting_819029 | chr11_62734757_+ | intronic |
CAediting_819030 | chr11_62734759_+ | intronic |
CAediting_819031 | chr11_62734919_+ | intronic |
CAediting_819032 | chr11_62734927_+ | intronic |
CAediting_819033 | chr11_62734958_+ | intronic |
CAediting_819034 | chr11_62734990_+ | intronic |
CAediting_819035 | chr11_62735036_+ | intronic |
CAediting_819036 | chr11_62735069_+ | intronic |
CAediting_819037 | chr11_62735103_+ | intronic |
CAediting_819038 | chr11_62735109_+ | intronic |
CAediting_819039 | chr11_62735156_+ | intronic |
CAediting_819040 | chr11_62736143_+ | UTR3 |
CAediting_819041 | chr11_62736149_+ | UTR3 |
CAediting_819042 | chr11_62736158_+ | UTR3 |
CAediting_819043 | chr11_62736268_+ | intronic |
CAediting_819044 | chr11_62736286_+ | intronic |
CAediting_819045 | chr11_62736287_+ | intronic |
CAediting_819046 | chr11_62736303_+ | intronic |
CAediting_819047 | chr11_62736340_+ | intronic |
CAediting_819048 | chr11_62736547_+ | intronic |
CAediting_819049 | chr11_62736669_+ | intronic |
CAediting_819050 | chr11_62736735_+ | intronic |
CAediting_819051 | chr11_62736736_+ | intronic |
CAediting_819052 | chr11_62736745_+ | intronic |
CAediting_819053 | chr11_62736749_+ | intronic |
CAediting_819054 | chr11_62737125_+ | intronic |
CAediting_819055 | chr11_62737777_+ | intronic |
CAediting_819056 | chr11_62737885_+ | intronic |
CAediting_819057 | chr11_62737889_+ | intronic |
CAediting_819058 | chr11_62738827_+ | intronic |
CAediting_819059 | chr11_62738835_+ | intronic |
CAediting_819060 | chr11_62738836_+ | intronic |
CAediting_819061 | chr11_62738858_+ | intronic |
CAediting_819062 | chr11_62738871_+ | intronic |
CAediting_819063 | chr11_62738876_+ | intronic |
CAediting_819064 | chr11_62738884_+ | intronic |
CAediting_819065 | chr11_62738890_+ | intronic |
CAediting_819066 | chr11_62738895_+ | intronic |
CAediting_819067 | chr11_62738904_+ | intronic |
CAediting_819068 | chr11_62738905_+ | intronic |
CAediting_819069 | chr11_62738907_+ | intronic |
CAediting_819070 | chr11_62738913_+ | intronic |
CAediting_819071 | chr11_62738914_+ | intronic |
CAediting_819072 | chr11_62738915_+ | intronic |
CAediting_819073 | chr11_62738926_+ | intronic |
CAediting_819074 | chr11_62738929_+ | intronic |
CAediting_819075 | chr11_62738932_+ | intronic |
CAediting_819076 | chr11_62738935_+ | intronic |
CAediting_819077 | chr11_62738938_+ | intronic |
CAediting_819078 | chr11_62738939_+ | intronic |
CAediting_819079 | chr11_62738940_+ | intronic |
CAediting_819080 | chr11_62738944_+ | intronic |
CAediting_819081 | chr11_62738952_+ | intronic |
CAediting_819082 | chr11_62738953_+ | intronic |
CAediting_819083 | chr11_62738955_+ | intronic |
CAediting_819084 | chr11_62738958_+ | intronic |
CAediting_819085 | chr11_62738960_+ | intronic |
CAediting_819086 | chr11_62738976_+ | intronic |
CAediting_819087 | chr11_62738980_+ | intronic |
CAediting_819088 | chr11_62739018_+ | intronic |
CAediting_819089 | chr11_62739028_+ | intronic |
CAediting_819090 | chr11_62739036_+ | intronic |
CAediting_819091 | chr11_62739037_+ | intronic |
CAediting_819092 | chr11_62739045_+ | intronic |
CAediting_819093 | chr11_62739052_+ | intronic |
CAediting_819094 | chr11_62739053_+ | intronic |
CAediting_819095 | chr11_62739063_+ | intronic |
CAediting_819096 | chr11_62739065_+ | intronic |
CAediting_819097 | chr11_62739067_+ | intronic |
CAediting_819098 | chr11_62739069_+ | intronic |
CAediting_819099 | chr11_62739071_+ | intronic |
CAediting_819100 | chr11_62739075_+ | intronic |
CAediting_819101 | chr11_62739081_+ | intronic |
CAediting_819102 | chr11_62739086_+ | intronic |
CAediting_819103 | chr11_62739089_+ | intronic |
CAediting_819104 | chr11_62739094_+ | intronic |
CAediting_819105 | chr11_62739095_+ | intronic |
CAediting_819106 | chr11_62739114_+ | intronic |
CAediting_819107 | chr11_62739134_+ | intronic |
CAediting_819108 | chr11_62739135_+ | intronic |
CAediting_819109 | chr11_62739136_+ | intronic |
CAediting_819110 | chr11_62739143_+ | intronic |
CAediting_819111 | chr11_62739156_+ | intronic |
CAediting_819112 | chr11_62739166_+ | intronic |
CAediting_819113 | chr11_62739175_+ | intronic |
CAediting_819114 | chr11_62739180_+ | intronic |
CAediting_819115 | chr11_62739183_+ | intronic |
CAediting_819116 | chr11_62739197_+ | intronic |
CAediting_819117 | chr11_62739201_+ | intronic |
CAediting_819118 | chr11_62739205_+ | intronic |
CAediting_819119 | chr11_62739218_+ | intronic |
CAediting_819120 | chr11_62739242_+ | intronic |
CAediting_819121 | chr11_62739263_+ | intronic |
CAediting_819122 | chr11_62739266_+ | intronic |
CAediting_819123 | chr11_62739267_+ | intronic |
CAediting_819124 | chr11_62739272_+ | intronic |
CAediting_819125 | chr11_62739282_+ | intronic |
CAediting_819126 | chr11_62739308_+ | intronic |
CAediting_819127 | chr11_62739314_+ | intronic |
CAediting_819128 | chr11_62739318_+ | intronic |
CAediting_819129 | chr11_62739331_+ | intronic |
CAediting_819130 | chr11_62739341_+ | intronic |
CAediting_819131 | chr11_62739346_+ | intronic |
CAediting_819132 | chr11_62739349_+ | intronic |
CAediting_819133 | chr11_62739350_+ | intronic |
CAediting_819134 | chr11_62739384_+ | intronic |
CAediting_819135 | chr11_62739399_+ | intronic |
CAediting_819136 | chr11_62739409_+ | intronic |
CAediting_819137 | chr11_62739411_+ | intronic |
CAediting_819138 | chr11_62739417_+ | intronic |
CAediting_819139 | chr11_62739448_+ | intronic |
CAediting_819140 | chr11_62739449_+ | intronic |
CAediting_819141 | chr11_62739454_+ | intronic |
CAediting_819142 | chr11_62739463_+ | intronic |
CAediting_819143 | chr11_62739477_+ | intronic |
CAediting_819144 | chr11_62739483_+ | intronic |
CAediting_819145 | chr11_62739487_+ | intronic |
CAediting_819146 | chr11_62739494_+ | intronic |
CAediting_819147 | chr11_62739499_+ | intronic |
CAediting_819148 | chr11_62739500_+ | intronic |
CAediting_819149 | chr11_62739518_+ | intronic |
CAediting_819150 | chr11_62739519_+ | intronic |
CAediting_819151 | chr11_62739530_+ | intronic |
CAediting_819152 | chr11_62739548_+ | intronic |
CAediting_819153 | chr11_62739580_+ | intronic |
CAediting_819154 | chr11_62739582_+ | intronic |
CAediting_819155 | chr11_62739586_+ | intronic |
CAediting_819156 | chr11_62739595_+ | intronic |
CAediting_819157 | chr11_62739596_+ | intronic |
CAediting_819158 | chr11_62739598_+ | intronic |
CAediting_819159 | chr11_62739599_+ | intronic |
CAediting_819160 | chr11_62739600_+ | intronic |
CAediting_819161 | chr11_62739603_+ | intronic |
CAediting_819162 | chr11_62739642_+ | intronic |
CAediting_819163 | chr11_62739644_+ | intronic |
CAediting_819164 | chr11_62739646_+ | intronic |
CAediting_819165 | chr11_62739648_+ | intronic |
CAediting_819166 | chr11_62739654_+ | intronic |
CAediting_819167 | chr11_62739673_+ | intronic |
CAediting_819168 | chr11_62739687_+ | intronic |
CAediting_819169 | chr11_62739697_+ | intronic |
CAediting_819170 | chr11_62739702_+ | intronic |
CAediting_819171 | chr11_62739703_+ | intronic |
CAediting_819172 | chr11_62739716_+ | intronic |
CAediting_819173 | chr11_62739722_+ | intronic |
CAediting_819174 | chr11_62739723_+ | intronic |
CAediting_819175 | chr11_62739727_+ | intronic |
CAediting_819176 | chr11_62739740_+ | intronic |
CAediting_819177 | chr11_62739744_+ | intronic |
CAediting_819178 | chr11_62739748_+ | intronic |
CAediting_819179 | chr11_62739749_+ | intronic |
CAediting_819180 | chr11_62739759_+ | intronic |
CAediting_819181 | chr11_62739762_+ | intronic |
CAediting_819182 | chr11_62739764_+ | intronic |
CAediting_819183 | chr11_62739768_+ | intronic |
CAediting_819184 | chr11_62739775_+ | intronic |
CAediting_819185 | chr11_62739778_+ | intronic |
CAediting_819186 | chr11_62739788_+ | intronic |
CAediting_819187 | chr11_62739789_+ | intronic |
CAediting_819188 | chr11_62739799_+ | intronic |
CAediting_819189 | chr11_62739810_+ | intronic |
CAediting_819190 | chr11_62739813_+ | intronic |
CAediting_819191 | chr11_62739815_+ | intronic |
CAediting_819192 | chr11_62739817_+ | intronic |
CAediting_819193 | chr11_62739819_+ | intronic |
CAediting_819194 | chr11_62739830_+ | intronic |
CAediting_819195 | chr11_62739839_+ | intronic |
CAediting_819196 | chr11_62739864_+ | intronic |
CAediting_819197 | chr11_62739869_+ | intronic |
CAediting_819198 | chr11_62739873_+ | intronic |
CAediting_819199 | chr11_62739889_+ | intronic |
CAediting_819200 | chr11_62739890_+ | intronic |
CAediting_819201 | chr11_62739891_+ | intronic |
CAediting_819202 | chr11_62739903_+ | intronic |
CAediting_819203 | chr11_62739905_+ | intronic |
CAediting_819204 | chr11_62739912_+ | intronic |
CAediting_819205 | chr11_62739919_+ | intronic |
CAediting_819206 | chr11_62739980_+ | ncRNA_exonic |
CAediting_819207 | chr11_62739998_+ | ncRNA_exonic |
Repat-regional RNA editing(s). |
CAeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
CAediting_818971 | chr11_62730137_+ | SINE | Alu | AluSq2 |
CAediting_818972 | chr11_62730156_+ | SINE | Alu | AluSq2 |
CAediting_818973 | chr11_62730175_+ | SINE | Alu | AluSq2 |
CAediting_818974 | chr11_62730214_+ | SINE | Alu | AluSq2 |
CAediting_818975 | chr11_62730230_+ | SINE | Alu | AluSq2 |
CAediting_818976 | chr11_62730262_+ | SINE | Alu | AluSq2 |
CAediting_818977 | chr11_62730337_+ | SINE | Alu | AluSq2 |
CAediting_818978 | chr11_62730349_+ | SINE | Alu | AluSq2 |
CAediting_818979 | chr11_62730677_+ | SINE | Alu | AluSp |
CAediting_818980 | chr11_62730703_+ | SINE | Alu | AluSp |
CAediting_818981 | chr11_62730793_+ | SINE | Alu | AluSp |
CAediting_818982 | chr11_62731069_+ | SINE | Alu | AluSx1 |
CAediting_818983 | chr11_62731072_+ | SINE | Alu | AluSx1 |
CAediting_818984 | chr11_62731098_+ | SINE | Alu | AluSx1 |
CAediting_818985 | chr11_62731110_+ | SINE | Alu | AluSx1 |
CAediting_818986 | chr11_62731151_+ | SINE | Alu | AluSx1 |
CAediting_818987 | chr11_62731356_+ | SINE | Alu | AluJb |
CAediting_818988 | chr11_62731358_+ | SINE | Alu | AluJb |
CAediting_818989 | chr11_62731365_+ | SINE | Alu | AluJb |
CAediting_818990 | chr11_62731370_+ | SINE | Alu | AluJb |
CAediting_818991 | chr11_62731395_+ | SINE | Alu | AluJb |
CAediting_818992 | chr11_62731409_+ | SINE | Alu | AluJb |
CAediting_818993 | chr11_62731434_+ | SINE | Alu | AluJb |
CAediting_818994 | chr11_62731435_+ | SINE | Alu | AluJb |
CAediting_818995 | chr11_62731436_+ | SINE | Alu | AluJb |
CAediting_818996 | chr11_62731437_+ | SINE | Alu | AluJb |
CAediting_818997 | chr11_62731438_+ | SINE | Alu | AluJb |
CAediting_818998 | chr11_62731450_+ | SINE | Alu | AluJb |
CAediting_818999 | chr11_62731458_+ | SINE | Alu | AluJb |
CAediting_819000 | chr11_62731476_+ | SINE | Alu | AluJb |
CAediting_819001 | chr11_62731517_+ | SINE | Alu | AluJb |
CAediting_819002 | chr11_62731538_+ | SINE | Alu | AluJb |
CAediting_819003 | chr11_62731546_+ | SINE | Alu | AluJb |
CAediting_819004 | chr11_62731547_+ | SINE | Alu | AluJb |
CAediting_819005 | chr11_62731557_+ | SINE | Alu | AluJb |
CAediting_819006 | chr11_62731759_+ | SINE | Alu | AluY |
CAediting_819007 | chr11_62731764_+ | SINE | Alu | AluY |
CAediting_819008 | chr11_62731765_+ | SINE | Alu | AluY |
CAediting_819009 | chr11_62731821_+ | SINE | Alu | AluY |
CAediting_819010 | chr11_62731920_+ | SINE | Alu | AluY |
CAediting_819011 | chr11_62732489_+ | SINE | Alu | AluSp |
CAediting_819012 | chr11_62732490_+ | SINE | Alu | AluSp |
CAediting_819013 | chr11_62732560_+ | SINE | Alu | AluSp |
CAediting_819014 | chr11_62732665_+ | SINE | Alu | AluSc8 |
CAediting_819015 | chr11_62732696_+ | SINE | Alu | AluSc8 |
CAediting_819016 | chr11_62732742_+ | SINE | Alu | AluSc8 |
CAediting_819017 | chr11_62732772_+ | SINE | Alu | AluSc8 |
CAediting_819018 | chr11_62732819_+ | SINE | Alu | AluSc8 |
CAediting_819019 | chr11_62732879_+ | SINE | Alu | AluSc8 |
CAediting_819020 | chr11_62733622_+ | SINE | Alu | AluYj4 |
CAediting_819021 | chr11_62733937_+ | SINE | Alu | AluSg |
CAediting_819022 | chr11_62733941_+ | SINE | Alu | AluSg |
CAediting_819023 | chr11_62734195_+ | SINE | Alu | AluSx |
CAediting_819024 | chr11_62734328_+ | SINE | Alu | AluSz |
CAediting_819025 | chr11_62734536_+ | SINE | Alu | AluSz |
CAediting_819026 | chr11_62734692_+ | SINE | Alu | FLAM_C |
CAediting_819027 | chr11_62734730_+ | SINE | Alu | FLAM_C |
CAediting_819028 | chr11_62734751_+ | SINE | Alu | FLAM_C |
CAediting_819029 | chr11_62734757_+ | SINE | Alu | FLAM_C |
CAediting_819030 | chr11_62734759_+ | SINE | Alu | FLAM_C |
CAediting_819031 | chr11_62734919_+ | SINE | Alu | AluSp |
CAediting_819032 | chr11_62734927_+ | SINE | Alu | AluSp |
CAediting_819033 | chr11_62734958_+ | SINE | Alu | AluSp |
CAediting_819034 | chr11_62734990_+ | SINE | Alu | AluSp |
CAediting_819035 | chr11_62735036_+ | SINE | Alu | AluSp |
CAediting_819036 | chr11_62735069_+ | SINE | Alu | AluSp |
CAediting_819037 | chr11_62735103_+ | SINE | Alu | AluSp |
CAediting_819038 | chr11_62735109_+ | SINE | Alu | AluSp |
CAediting_819039 | chr11_62735156_+ | SINE | Alu | AluSp |
CAediting_819040 | chr11_62736143_+ | SINE | Alu | AluSp |
CAediting_819041 | chr11_62736149_+ | SINE | Alu | AluSp |
CAediting_819042 | chr11_62736158_+ | SINE | Alu | AluSp |
CAediting_819043 | chr11_62736268_+ | SINE | Alu | AluSx1 |
CAediting_819044 | chr11_62736286_+ | SINE | Alu | AluSx1 |
CAediting_819045 | chr11_62736287_+ | SINE | Alu | AluSx1 |
CAediting_819046 | chr11_62736303_+ | SINE | Alu | AluSx1 |
CAediting_819047 | chr11_62736340_+ | SINE | Alu | AluSx1 |
CAediting_819048 | chr11_62736547_+ | SINE | Alu | AluY |
CAediting_819049 | chr11_62736669_+ | SINE | Alu | AluY |
CAediting_819050 | chr11_62736735_+ | SINE | Alu | AluSx1 |
CAediting_819051 | chr11_62736736_+ | SINE | Alu | AluSx1 |
CAediting_819052 | chr11_62736745_+ | SINE | Alu | AluSx1 |
CAediting_819053 | chr11_62736749_+ | SINE | Alu | AluSx1 |
CAediting_819054 | chr11_62737125_+ | SINE | Alu | AluY |
CAediting_819055 | chr11_62737777_+ | SINE | Alu | AluSg |
CAediting_819056 | chr11_62737885_+ | SINE | Alu | AluSg |
CAediting_819057 | chr11_62737889_+ | SINE | Alu | AluSg |
CAediting_819058 | chr11_62738827_+ | SINE | Alu | AluSx |
CAediting_819059 | chr11_62738835_+ | SINE | Alu | AluSx |
CAediting_819060 | chr11_62738836_+ | SINE | Alu | AluSx |
CAediting_819061 | chr11_62738858_+ | SINE | Alu | AluSx |
CAediting_819062 | chr11_62738871_+ | SINE | Alu | AluSx |
CAediting_819063 | chr11_62738876_+ | SINE | Alu | AluSx |
CAediting_819064 | chr11_62738884_+ | SINE | Alu | AluSx |
CAediting_819065 | chr11_62738890_+ | SINE | Alu | AluSx |
CAediting_819066 | chr11_62738895_+ | SINE | Alu | AluSx |
CAediting_819067 | chr11_62738904_+ | SINE | Alu | AluSx |
CAediting_819068 | chr11_62738905_+ | SINE | Alu | AluSx |
CAediting_819069 | chr11_62738907_+ | SINE | Alu | AluSx |
CAediting_819070 | chr11_62738913_+ | SINE | Alu | AluSx |
CAediting_819071 | chr11_62738914_+ | SINE | Alu | AluSx |
CAediting_819072 | chr11_62738915_+ | SINE | Alu | AluSx |
CAediting_819073 | chr11_62738926_+ | SINE | Alu | AluSx |
CAediting_819074 | chr11_62738929_+ | SINE | Alu | AluSx |
CAediting_819075 | chr11_62738932_+ | SINE | Alu | AluSx |
CAediting_819076 | chr11_62738935_+ | SINE | Alu | AluSx |
CAediting_819077 | chr11_62738938_+ | SINE | Alu | AluSx |
CAediting_819078 | chr11_62738939_+ | SINE | Alu | AluSx |
CAediting_819079 | chr11_62738940_+ | SINE | Alu | AluSx |
CAediting_819080 | chr11_62738944_+ | SINE | Alu | AluSx |
CAediting_819081 | chr11_62738952_+ | SINE | Alu | AluSx |
CAediting_819082 | chr11_62738953_+ | SINE | Alu | AluSx |
CAediting_819083 | chr11_62738955_+ | SINE | Alu | AluSx |
CAediting_819084 | chr11_62738958_+ | SINE | Alu | AluSx |
CAediting_819085 | chr11_62738960_+ | SINE | Alu | AluSx |
CAediting_819086 | chr11_62738976_+ | SINE | Alu | AluSx |
CAediting_819087 | chr11_62738980_+ | SINE | Alu | AluSx |
CAediting_819088 | chr11_62739018_+ | SINE | Alu | AluJb |
CAediting_819089 | chr11_62739028_+ | SINE | Alu | AluJb |
CAediting_819090 | chr11_62739036_+ | SINE | Alu | AluJb |
CAediting_819091 | chr11_62739037_+ | SINE | Alu | AluJb |
CAediting_819092 | chr11_62739045_+ | SINE | Alu | AluJb |
CAediting_819093 | chr11_62739052_+ | SINE | Alu | AluJb |
CAediting_819094 | chr11_62739053_+ | SINE | Alu | AluJb |
CAediting_819095 | chr11_62739063_+ | SINE | Alu | AluJb |
CAediting_819096 | chr11_62739065_+ | SINE | Alu | AluJb |
CAediting_819097 | chr11_62739067_+ | SINE | Alu | AluJb |
CAediting_819098 | chr11_62739069_+ | SINE | Alu | AluJb |
CAediting_819099 | chr11_62739071_+ | SINE | Alu | AluJb |
CAediting_819100 | chr11_62739075_+ | SINE | Alu | AluJb |
CAediting_819101 | chr11_62739081_+ | SINE | Alu | AluJb |
CAediting_819102 | chr11_62739086_+ | SINE | Alu | AluJb |
CAediting_819103 | chr11_62739089_+ | SINE | Alu | AluJb |
CAediting_819104 | chr11_62739094_+ | SINE | Alu | AluJb |
CAediting_819105 | chr11_62739095_+ | SINE | Alu | AluJb |
CAediting_819106 | chr11_62739114_+ | SINE | Alu | AluJb |
CAediting_819107 | chr11_62739134_+ | SINE | Alu | AluJb |
CAediting_819108 | chr11_62739135_+ | SINE | Alu | AluJb |
CAediting_819109 | chr11_62739136_+ | SINE | Alu | AluJb |
CAediting_819110 | chr11_62739143_+ | SINE | Alu | AluJb |
CAediting_819111 | chr11_62739156_+ | SINE | Alu | AluYm1 |
CAediting_819112 | chr11_62739166_+ | SINE | Alu | AluYm1 |
CAediting_819113 | chr11_62739175_+ | SINE | Alu | AluYm1 |
CAediting_819114 | chr11_62739180_+ | SINE | Alu | AluYm1 |
CAediting_819115 | chr11_62739183_+ | SINE | Alu | AluYm1 |
CAediting_819116 | chr11_62739197_+ | SINE | Alu | AluYm1 |
CAediting_819117 | chr11_62739201_+ | SINE | Alu | AluYm1 |
CAediting_819118 | chr11_62739205_+ | SINE | Alu | AluYm1 |
CAediting_819119 | chr11_62739218_+ | SINE | Alu | AluYm1 |
CAediting_819120 | chr11_62739242_+ | SINE | Alu | AluYm1 |
CAediting_819121 | chr11_62739263_+ | SINE | Alu | AluYm1 |
CAediting_819122 | chr11_62739266_+ | SINE | Alu | AluYm1 |
CAediting_819123 | chr11_62739267_+ | SINE | Alu | AluYm1 |
CAediting_819124 | chr11_62739272_+ | SINE | Alu | AluYm1 |
CAediting_819125 | chr11_62739282_+ | SINE | Alu | AluYm1 |
CAediting_819126 | chr11_62739308_+ | SINE | Alu | AluYm1 |
CAediting_819127 | chr11_62739314_+ | SINE | Alu | AluYm1 |
CAediting_819128 | chr11_62739318_+ | SINE | Alu | AluYm1 |
CAediting_819129 | chr11_62739331_+ | SINE | Alu | AluYm1 |
CAediting_819130 | chr11_62739341_+ | SINE | Alu | AluYm1 |
CAediting_819131 | chr11_62739346_+ | SINE | Alu | AluYm1 |
CAediting_819132 | chr11_62739349_+ | SINE | Alu | AluYm1 |
CAediting_819133 | chr11_62739350_+ | SINE | Alu | AluYm1 |
CAediting_819134 | chr11_62739384_+ | SINE | Alu | AluYm1 |
CAediting_819135 | chr11_62739399_+ | SINE | Alu | AluYm1 |
CAediting_819136 | chr11_62739409_+ | SINE | Alu | AluYm1 |
CAediting_819137 | chr11_62739411_+ | SINE | Alu | AluYm1 |
CAediting_819138 | chr11_62739417_+ | SINE | Alu | AluYm1 |
CAediting_819139 | chr11_62739448_+ | SINE | Alu | AluJb |
CAediting_819140 | chr11_62739449_+ | SINE | Alu | AluJb |
CAediting_819141 | chr11_62739454_+ | SINE | Alu | AluJb |
CAediting_819142 | chr11_62739463_+ | SINE | Alu | AluJb |
CAediting_819143 | chr11_62739477_+ | SINE | Alu | AluJb |
CAediting_819144 | chr11_62739483_+ | SINE | Alu | AluJb |
CAediting_819145 | chr11_62739487_+ | SINE | Alu | AluJb |
CAediting_819146 | chr11_62739494_+ | SINE | Alu | AluJb |
CAediting_819147 | chr11_62739499_+ | SINE | Alu | AluJb |
CAediting_819148 | chr11_62739500_+ | SINE | Alu | AluJb |
CAediting_819149 | chr11_62739518_+ | SINE | Alu | AluJb |
CAediting_819150 | chr11_62739519_+ | SINE | Alu | AluJb |
CAediting_819151 | chr11_62739530_+ | SINE | Alu | AluJb |
CAediting_819152 | chr11_62739548_+ | SINE | Alu | AluJb |
CAediting_819153 | chr11_62739580_+ | SINE | Alu | AluJb |
CAediting_819154 | chr11_62739582_+ | SINE | Alu | AluJb |
CAediting_819155 | chr11_62739586_+ | SINE | Alu | AluJb |
CAediting_819156 | chr11_62739595_+ | SINE | Alu | AluJb |
CAediting_819157 | chr11_62739596_+ | SINE | Alu | AluJb |
CAediting_819158 | chr11_62739598_+ | SINE | Alu | AluJb |
CAediting_819159 | chr11_62739599_+ | SINE | Alu | AluJb |
CAediting_819160 | chr11_62739600_+ | SINE | Alu | AluJb |
CAediting_819161 | chr11_62739603_+ | SINE | Alu | AluJb |
CAediting_819162 | chr11_62739642_+ | SINE | Alu | AluSz6 |
CAediting_819163 | chr11_62739644_+ | SINE | Alu | AluSz6 |
CAediting_819164 | chr11_62739646_+ | SINE | Alu | AluSz6 |
CAediting_819165 | chr11_62739648_+ | SINE | Alu | AluSz6 |
CAediting_819166 | chr11_62739654_+ | SINE | Alu | AluSz6 |
CAediting_819167 | chr11_62739673_+ | SINE | Alu | AluSz6 |
CAediting_819168 | chr11_62739687_+ | SINE | Alu | AluSz6 |
CAediting_819169 | chr11_62739697_+ | SINE | Alu | AluSz6 |
CAediting_819170 | chr11_62739702_+ | SINE | Alu | AluSz6 |
CAediting_819171 | chr11_62739703_+ | SINE | Alu | AluSz6 |
CAediting_819172 | chr11_62739716_+ | SINE | Alu | AluSz6 |
CAediting_819173 | chr11_62739722_+ | SINE | Alu | AluSz6 |
CAediting_819174 | chr11_62739723_+ | SINE | Alu | AluSz6 |
CAediting_819175 | chr11_62739727_+ | SINE | Alu | AluSz6 |
CAediting_819176 | chr11_62739740_+ | SINE | Alu | AluSz6 |
CAediting_819177 | chr11_62739744_+ | SINE | Alu | AluSz6 |
CAediting_819178 | chr11_62739748_+ | SINE | Alu | AluSz6 |
CAediting_819179 | chr11_62739749_+ | SINE | Alu | AluSz6 |
CAediting_819180 | chr11_62739759_+ | SINE | Alu | AluSz6 |
CAediting_819181 | chr11_62739762_+ | SINE | Alu | AluSz6 |
CAediting_819182 | chr11_62739764_+ | SINE | Alu | AluSz6 |
CAediting_819183 | chr11_62739768_+ | SINE | Alu | AluSz6 |
CAediting_819184 | chr11_62739775_+ | SINE | Alu | AluSz6 |
CAediting_819185 | chr11_62739778_+ | SINE | Alu | AluSz6 |
CAediting_819186 | chr11_62739788_+ | SINE | Alu | AluSz6 |
CAediting_819187 | chr11_62739789_+ | SINE | Alu | AluSz6 |
CAediting_819188 | chr11_62739799_+ | SINE | Alu | AluSz6 |
CAediting_819189 | chr11_62739810_+ | SINE | Alu | AluSz6 |
CAediting_819190 | chr11_62739813_+ | SINE | Alu | AluSz6 |
CAediting_819191 | chr11_62739815_+ | SINE | Alu | AluSz6 |
CAediting_819192 | chr11_62739817_+ | SINE | Alu | AluSz6 |
CAediting_819193 | chr11_62739819_+ | SINE | Alu | AluSz6 |
CAediting_819194 | chr11_62739830_+ | SINE | Alu | AluSz6 |
CAediting_819195 | chr11_62739839_+ | SINE | Alu | AluSz6 |
CAediting_819196 | chr11_62739864_+ | SINE | Alu | AluSz6 |
CAediting_819197 | chr11_62739869_+ | SINE | Alu | AluSz6 |
CAediting_819198 | chr11_62739873_+ | SINE | Alu | AluSz6 |
CAediting_819199 | chr11_62739889_+ | SINE | Alu | AluSz6 |
CAediting_819200 | chr11_62739890_+ | SINE | Alu | AluSz6 |
CAediting_819201 | chr11_62739891_+ | SINE | Alu | AluSz6 |
CAediting_819202 | chr11_62739903_+ | SINE | Alu | AluSz6 |
CAediting_819203 | chr11_62739905_+ | SINE | Alu | AluSz6 |
CAediting_819204 | chr11_62739912_+ | SINE | Alu | AluSz6 |
CAediting_819205 | chr11_62739919_+ | SINE | Alu | AluSz6 |
CAediting_819206 | chr11_62739980_+ | LINE | L1 | L1PA10 |
CAediting_819207 | chr11_62739998_+ | LINE | L1 | L1PA10 |
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RNA A-to-I editing events in the alternative splicing sites for TTC9C |
RNA A-to-I editing(s) in the alternative splicing sites. |
AStype | CAeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
ES | CAediting_819086 | chr11_62738976_+ | 62738975:62738983 | 5SS | 2+0i | CAGGTACTG | 9.04 | CGGGTACTG | 5.43 |
IR | CAediting_819086 | chr11_62738976_+ | 62738975:62738983 | 5SS | 2+0i | CAGGTACTG | 9.04 | CGGGTACTG | 5.43 |
ES | CAediting_819087 | chr11_62738980_+ | 62738975:62738983 | 5SS | 0+3i | CAGGTACTG | 9.04 | CAGGTGCTG | 4.87 |
IR | CAediting_819087 | chr11_62738980_+ | 62738975:62738983 | 5SS | 0+3i | CAGGTACTG | 9.04 | CAGGTGCTG | 4.87 |
Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000162222.12.TTC9C. |
Correlation between RNA A-to-I editing and PSI for ENSG00000162222.12.TTC9C. |
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Differntial gene expression between RNA A-to-I edited versus non-edited samples for TTC9C |
Differential gene expressions between RNA A-to-I edited and non-edited tumor samples. * The grey color means N/A. |
Correlation between RNA A-to-I editing and gene expression. |
- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
Top |
Protein coding region RNA A-to-I editings for TTC9C |
- Lollipop plot for RNA A-to-I editings across protein structure. * Click on the image to enlarge it in a new window. |
Top |
The effects of the RNA editing to the miRNA binding sites for TTC9C |
**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page. |
RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites. |
CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
CAediting_819041 | chr11_62736149_+ | ENSG00000162222.12 | ENST00000294161 | hsa-miR-891b | 62736147 | 62736152 | 6mer | 62736132 | 62736153 | 150.00 | -18.80 |
CAediting_819042 | chr11_62736158_+ | ENSG00000162222.12 | ENST00000294161 | hsa-miR-10400-3p | 62736155 | 62736161 | 7mer-m8 | 62736141 | 62736162 | 141.00 | -22.13 |
CAediting_819042 | chr11_62736158_+ | ENSG00000162222.12 | ENST00000294161 | hsa-miR-4437 | 62736154 | 62736161 | 8mer-1a | 62736141 | 62736161 | 146.00 | -19.59 |
CAediting_819042 | chr11_62736158_+ | ENSG00000162222.12 | ENST00000294161 | hsa-miR-4674 | 62736155 | 62736161 | 7mer-m8 | 62736142 | 62736162 | 147.00 | -23.48 |
CAediting_819207 | chr11_62739998_+ | ENSG00000162222.12 | ENST00000532276 | hsa-miR-4793-5p | 62739991 | 62739997 | 7mer-m8 | 62739978 | 62739998 | 150.00 | -20.83 |
RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites. |
CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
CAediting_819040 | chr11_62736143_+ | ENSG00000162222.12 | ENST00000294161 | hsa-miR-1976 | 62736140 | 62736147 | 8mer-1a | 62736127 | 62736147 | 149 | -24.39 |
CAediting_819042 | chr11_62736158_+ | ENSG00000162222.12 | ENST00000294161 | hsa-miR-498-5p | 62736151 | 62736157 | 7mer-m8 | 62736136 | 62736158 | 142 | -10.65 |
CAediting_819041 | chr11_62736149_+ | ENSG00000162222.12 | ENST00000294161 | hsa-miR-5571-5p | 62736144 | 62736150 | 7mer-m8 | 62736129 | 62736151 | 142 | -26.87 |
CAediting_819040 | chr11_62736143_+ | ENSG00000162222.12 | ENST00000294161 | hsa-miR-6747-3p | 62736138 | 62736145 | 8mer-1a | 62736123 | 62736145 | 149 | -23.68 |
CAediting_819207 | chr11_62739998_+ | ENSG00000162222.12 | ENST00000532276 | hsa-miR-448 | 62739995 | 62740001 | 7mer-m8 | 62739981 | 62740002 | 149 | -11.94 |
RNA A-to-I editing in lncRNA gained miRNA binding sites. |
CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
RNA A-to-I editing in lncRNA lost miRNA binding sites. |
CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
RNA A-to-I editing in miRNAs gained binding to lncRNA. |
CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
RNA A-to-I editing in miRNAs lost binding to lncRNA. |
CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA. |
CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
CAediting_1160181 | chr17_7017644_- | ENSG00000162222.12 | ENST00000294161 | hsa-miR-195-3p | 62733161 | 62733168 | 8mer-1a | 62733150 | 62733168 | 144 | -10.84 |
CAediting_1306323 | chr19_13836462_- | ENSG00000162222.12 | ENST00000294161 | hsa-miR-27a-3p | 62735543 | 62735549 | 7mer-1a | 62735529 | 62735549 | 143 | -19.38 |
CAediting_573000 | chr7_92204081_- | ENSG00000162222.12 | ENST00000294161 | hsa-miR-1285-5p | 62736205 | 62736210 | 6mer | 62736190 | 62736211 | 154 | -33.75 |
CAediting_604450 | chr7_133034877_- | ENSG00000162222.12 | ENST00000532276 | hsa-miR-3654 | 62740072 | 62740079 | 8mer-1a | 62740058 | 62740079 | 155 | -24.24 |
RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA. |
CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
Differentially expressed gene-miRNA network |
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The effects of the RNA editing to the stability of the RNA structures for TTC9C |
- RNA A-to-I editing in mRNA. * Click on the image to enlarge it in a new window. |
ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
RNA A-to-I editing in RNA structures for Minimum free energy (MFE). |
CAeditom_ID | ENST | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
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Relation with ADAR for TTC9C |
Correlation between ADAR gene expression and RNA editing frequency |
Cancer | CAeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
BLCA | CAediting_819058 | chr11_62738827_+ | 0.000706472444162755 | 0.214094851101788 | . | . | . | . |
LGG | CAediting_819058 | chr11_62738827_+ | . | . | . | . | 0.0321227369075938 | 0.102766768292036 |
BRCA | CAediting_819058 | chr11_62738827_+ | 4.27907158639202e-07 | 0.164271687058119 | . | . | . | . |
LUSC | CAediting_819058 | chr11_62738827_+ | 0.000372098766880353 | 0.190549585407353 | . | . | . | . |
HNSC | CAediting_819058 | chr11_62738827_+ | 0.0320664071987799 | 0.13535405134809 | . | . | . | . |
SARC | CAediting_819058 | chr11_62738827_+ | 0.0383527133637966 | 0.152824377639355 | . | . | . | . |
TGCT | CAediting_819058 | chr11_62738827_+ | 0.00402871116947004 | 0.275848629084218 | . | . | . | . |
BRCA | CAediting_819065 | chr11_62738890_+ | 4.48327822993876e-07 | 0.227695281918505 | . | . | . | . |
LUAD | CAediting_819065 | chr11_62738890_+ | 0.0298601517509191 | 0.162852816480747 | . | . | . | . |
KIRC | CAediting_819065 | chr11_62738890_+ | 0.0269086632424984 | 0.135944673817758 | . | . | . | . |
SKCM | CAediting_819065 | chr11_62738890_+ | 0.0219518520235345 | 0.20646744666854 | . | . | . | . |
STAD | CAediting_819068 | chr11_62738905_+ | . | . | . | . | 6.01266300875689e-06 | 0.459168033296741 |
BLCA | CAediting_819080 | chr11_62738944_+ | 0.000694685866361626 | 0.206680018999021 | . | . | . | . |
LGG | CAediting_819080 | chr11_62738944_+ | . | . | . | . | 0.0110433371299292 | 0.134361957646255 |
BRCA | CAediting_819080 | chr11_62738944_+ | 5.33901628470075e-12 | 0.224159143919871 | . | . | . | . |
CESC | CAediting_819080 | chr11_62738944_+ | 0.00650971540177306 | 0.201562083151606 | . | . | . | . |
LUAD | CAediting_819080 | chr11_62738944_+ | 6.23371229338472e-07 | 0.252671193060096 | . | . | . | . |
COAD | CAediting_819080 | chr11_62738944_+ | 0.0456045374698823 | 0.133119614844221 | . | . | . | . |
LUSC | CAediting_819080 | chr11_62738944_+ | 4.1823459318108e-05 | 0.213012976805485 | . | . | . | . |
HNSC | CAediting_819080 | chr11_62738944_+ | 0.0226880164590696 | 0.146444673054073 | . | . | . | . |
STAD | CAediting_819080 | chr11_62738944_+ | 0.000214114057400576 | 0.228514027252342 | . | . | . | . |
OV | CAediting_819080 | chr11_62738944_+ | 0.00757646835827224 | 0.154930143584484 | . | . | . | . |
SKCM | CAediting_819080 | chr11_62738944_+ | 7.33909125949303e-07 | 0.27100249654789 | . | . | . | . |
READ | CAediting_819080 | chr11_62738944_+ | 0.0432294042136041 | 0.228063424802027 | . | . | . | . |
TGCT | CAediting_819080 | chr11_62738944_+ | 0.00203322250542112 | 0.311117321618462 | . | . | . | . |
BRCA | CAediting_819088 | chr11_62739018_+ | 0.0455371507635897 | 0.159839837406477 | . | . | . | . |
BRCA | CAediting_819089 | chr11_62739028_+ | 0.0140000072097046 | 0.12680324789079 | . | . | . | . |
STAD | CAediting_819089 | chr11_62739028_+ | . | . | . | . | 0.00915367161960044 | 0.198770871026764 |
BLCA | CAediting_819112 | chr11_62739166_+ | 5.53865271731961e-06 | 0.269142382623709 | . | . | . | . |
LGG | CAediting_819112 | chr11_62739166_+ | 0.00388934813789041 | 0.14404723093256 | . | . | . | . |
BRCA | CAediting_819112 | chr11_62739166_+ | 6.34117491608363e-28 | 0.349954274488223 | . | . | . | . |
LIHC | CAediting_819112 | chr11_62739166_+ | 0.0411506810345578 | 0.158207073544376 | . | . | . | . |
CESC | CAediting_819112 | chr11_62739166_+ | 0.0015721405845441 | 0.220485351916354 | . | . | . | . |
LUAD | CAediting_819112 | chr11_62739166_+ | 1.15685665080882e-11 | 0.339701011368689 | . | . | . | . |
COAD | CAediting_819112 | chr11_62739166_+ | 0.00049633288353033 | 0.22451944789953 | . | . | . | . |
LUSC | CAediting_819112 | chr11_62739166_+ | 0.00015267154324674 | 0.209813323267774 | . | . | . | . |
THCA | CAediting_819112 | chr11_62739166_+ | 0.000489589052470195 | 0.167234978403355 | . | . | . | . |
KIRC | CAediting_819112 | chr11_62739166_+ | 0.000340177223945142 | 0.16473760835912 | . | . | . | . |
UCEC | CAediting_819112 | chr11_62739166_+ | 0.00268400225794298 | 0.233652925332359 | . | . | . | . |
ESCA | CAediting_819112 | chr11_62739166_+ | 0.0122179324720227 | 0.252251683100033 | . | . | . | . |
OV | CAediting_819112 | chr11_62739166_+ | 0.00126700813303785 | 0.196996163514987 | . | . | . | . |
PCPG | CAediting_819112 | chr11_62739166_+ | 0.0128048558052796 | 0.242187477789121 | 0.00577425798130781 | 0.267651518126144 | . | . |
SKCM | CAediting_819112 | chr11_62739166_+ | 1.36965345845816e-12 | 0.365867736318679 | . | . | . | . |
MESO | CAediting_819112 | chr11_62739166_+ | 0.000239976956551362 | 0.41727678759462 | . | . | 0.019561467364453 | 0.272755275328008 |
SARC | CAediting_819112 | chr11_62739166_+ | 7.42083945833712e-06 | 0.327058646820403 | . | . | . | . |
TGCT | CAediting_819112 | chr11_62739166_+ | 0.00053385031137878 | 0.33229162150501 | . | . | . | . |
THYM | CAediting_819112 | chr11_62739166_+ | 5.69743867979471e-06 | 0.475003607493908 | . | . | 0.0311496633973933 | 0.236775054888213 |
GBM | CAediting_819118 | chr11_62739205_+ | 0.000393052447838892 | 0.35819124221856 | . | . | . | . |
BLCA | CAediting_819148 | chr11_62739500_+ | 0.000291680605314859 | 0.284477855484735 | 0.0120499535714905 | 0.199313188781467 | . | . |
BRCA | CAediting_819148 | chr11_62739500_+ | 2.1680333491692e-35 | 0.457129836932349 | . | . | . | . |
LIHC | CAediting_819148 | chr11_62739500_+ | 0.000147491794502412 | 0.28303385566687 | . | . | . | . |
CESC | CAediting_819148 | chr11_62739500_+ | 0.0212689614618263 | 0.215545426131992 | . | . | . | . |
LUAD | CAediting_819148 | chr11_62739500_+ | 1.32496753791156e-09 | 0.350536534703141 | . | . | . | . |
LUSC | CAediting_819148 | chr11_62739500_+ | 0.000779629830134406 | 0.248232119673146 | . | . | . | . |
HNSC | CAediting_819148 | chr11_62739500_+ | 0.00117476484814578 | 0.265984619051563 | . | . | . | . |
THCA | CAediting_819148 | chr11_62739500_+ | 0.0322912506574333 | 0.136825696716122 | . | . | . | . |
UCEC | CAediting_819148 | chr11_62739500_+ | 0.0192245965111064 | 0.177350896874595 | . | . | . | . |
OV | CAediting_819148 | chr11_62739500_+ | 0.0346070256787355 | 0.133971202371481 | . | . | . | . |
PAAD | CAediting_819148 | chr11_62739500_+ | . | . | . | . | 0.0156636320502392 | 0.258413699302015 |
SKCM | CAediting_819148 | chr11_62739500_+ | 1.83767717367766e-05 | 0.31680076840136 | . | . | . | . |
SARC | CAediting_819148 | chr11_62739500_+ | 1.26354522385589e-05 | 0.383996990138643 | . | . | . | . |
TGCT | CAediting_819148 | chr11_62739500_+ | 0.000105257740557623 | 0.412794076233653 | . | . | . | . |
BLCA | CAediting_819149 | chr11_62739518_+ | 0.000115188072751447 | 0.196022670649021 | . | . | . | . |
LGG | CAediting_819149 | chr11_62739518_+ | 5.2060005196677e-05 | 0.178169562616314 | . | . | . | . |
BRCA | CAediting_819149 | chr11_62739518_+ | 3.31582451215347e-06 | 0.141807282880522 | . | . | . | . |
LUAD | CAediting_819149 | chr11_62739518_+ | 0.00899812424024508 | 0.116478156484714 | . | . | . | . |
COAD | CAediting_819149 | chr11_62739518_+ | 0.00451663937882756 | 0.139300168544558 | . | . | . | . |
PRAD | CAediting_819149 | chr11_62739518_+ | 0.00081892066805274 | 0.153197785526023 | . | . | . | . |
HNSC | CAediting_819149 | chr11_62739518_+ | 0.000361514477206156 | 0.170056047196915 | . | . | . | . |
STAD | CAediting_819149 | chr11_62739518_+ | 0.00119100191982535 | 0.183845576577534 | . | . | . | . |
THCA | CAediting_819149 | chr11_62739518_+ | 2.24465588418107e-05 | 0.187793037758103 | . | . | . | . |
UCEC | CAediting_819149 | chr11_62739518_+ | 0.0345659695845808 | 0.0988893931732959 | . | . | . | . |
PAAD | CAediting_819149 | chr11_62739518_+ | 0.0194215762902085 | 0.181824404900385 | . | . | . | . |
SKCM | CAediting_819149 | chr11_62739518_+ | 0.00012776091527666 | 0.180007645448035 | . | . | . | . |
MESO | CAediting_819149 | chr11_62739518_+ | 0.00694663408389328 | 0.294171438006377 | . | . | . | . |
SARC | CAediting_819149 | chr11_62739518_+ | 0.0161232079507497 | 0.153593270845059 | . | . | . | . |
TGCT | CAediting_819149 | chr11_62739518_+ | 0.0120152231422295 | 0.212519051259215 | . | . | . | . |
THYM | CAediting_819149 | chr11_62739518_+ | 0.0151916317144 | 0.236388413478743 | . | . | 0.0133243839042811 | 0.240849563237388 |
COAD | CAediting_819162 | chr11_62739642_+ | 0.0485987366737625 | 0.269683279775861 | . | . | . | . |
BLCA | CAediting_819163 | chr11_62739644_+ | 0.00158221763729176 | 0.18284597955329 | . | . | . | . |
BRCA | CAediting_819163 | chr11_62739644_+ | 2.09218397468903e-05 | 0.135324067279354 | . | . | . | . |
LUAD | CAediting_819163 | chr11_62739644_+ | 0.0151975609036266 | 0.121769832531668 | . | . | . | . |
COAD | CAediting_819163 | chr11_62739644_+ | 0.00073440935177939 | 0.208896011091391 | . | . | . | . |
THCA | CAediting_819163 | chr11_62739644_+ | 0.030174044696454 | 0.100437010520751 | . | . | . | . |
ACC | CAediting_819163 | chr11_62739644_+ | 0.0222233607984554 | 0.305106293421176 | . | . | . | . |
SKCM | CAediting_819163 | chr11_62739644_+ | 0.0020956916391942 | 0.161408701160076 | . | . | . | . |
TGCT | CAediting_819163 | chr11_62739644_+ | 0.00333455491375657 | 0.277501394307835 | . | . | . | . |
THYM | CAediting_819163 | chr11_62739644_+ | . | . | . | . | 0.00949366785413734 | 0.267652738547584 |
BLCA | CAediting_819164 | chr11_62739646_+ | . | . | . | . | 1.43104214792613e-06 | 0.593478372592017 |
LUAD | CAediting_819164 | chr11_62739646_+ | 0.0495559184765984 | 0.240901056172882 | . | . | . | . |
BRCA | CAediting_819166 | chr11_62739654_+ | 0.0173428374432969 | 0.109712242631744 | . | . | . | . |
GBM | CAediting_819166 | chr11_62739654_+ | 0.00944109317849439 | 0.347018664617796 | . | . | . | . |
BLCA | CAediting_819172 | chr11_62739716_+ | 0.000988017901896435 | 0.276418343595108 | . | . | . | . |
LGG | CAediting_819172 | chr11_62739716_+ | . | . | 0.00721366752233377 | 0.212984520312269 | . | . |
BRCA | CAediting_819172 | chr11_62739716_+ | 4.0677838900237e-12 | 0.280580248836851 | . | . | . | . |
CESC | CAediting_819172 | chr11_62739716_+ | . | . | . | . | 0.0416345705953759 | 0.209455980004477 |
LUAD | CAediting_819172 | chr11_62739716_+ | 0.000275077916331761 | 0.231846718283482 | . | . | . | . |
STAD | CAediting_819172 | chr11_62739716_+ | 0.0163670505064983 | 0.192573338086297 | . | . | . | . |
UCEC | CAediting_819172 | chr11_62739716_+ | 0.0117107681125365 | 0.188567998174229 | . | . | . | . |
ESCA | CAediting_819172 | chr11_62739716_+ | 0.00676451628888726 | 0.325460624664497 | . | . | . | . |
OV | CAediting_819172 | chr11_62739716_+ | 0.0162714490802576 | 0.142478372469237 | . | . | . | . |
PAAD | CAediting_819172 | chr11_62739716_+ | . | . | 0.013803156686165 | 0.31124232984531 | . | . |
SKCM | CAediting_819172 | chr11_62739716_+ | 0.00024469346681902 | 0.282700808679443 | . | . | . | . |
SARC | CAediting_819172 | chr11_62739716_+ | 0.000589565993751356 | 0.355297069890976 | . | . | . | . |
BLCA | CAediting_819174 | chr11_62739723_+ | 0.0455017584057373 | 0.206814036817371 | . | . | . | . |
BRCA | CAediting_819174 | chr11_62739723_+ | 0.000144625725163751 | 0.180394108044946 | 0.0170952770386081 | 0.113767858019052 | . | . |
LUAD | CAediting_819174 | chr11_62739723_+ | 0.0494612982039984 | 0.156077710216174 | . | . | . | . |
OV | CAediting_819174 | chr11_62739723_+ | . | . | . | . | 0.0175866639437563 | 0.161794515921004 |
BRCA | CAediting_819176 | chr11_62739740_+ | 2.4347113674656e-06 | 0.191524389470396 | . | . | . | . |
LUAD | CAediting_819176 | chr11_62739740_+ | 0.0101041388412056 | 0.17428353627756 | . | . | . | . |
STAD | CAediting_819176 | chr11_62739740_+ | 0.00407764259657864 | 0.26253783854436 | . | . | . | . |
UCEC | CAediting_819176 | chr11_62739740_+ | 0.00578497578124283 | 0.244548655547225 | . | . | 0.00335668931249214 | 0.25939265790879 |
ESCA | CAediting_819176 | chr11_62739740_+ | . | . | 0.00520397108115271 | 0.36530028041284 | . | . |
OV | CAediting_819176 | chr11_62739740_+ | 0.00327879155342066 | 0.184183993485643 | . | . | . | . |
SKCM | CAediting_819176 | chr11_62739740_+ | 0.00571192144120188 | 0.221036332791904 | . | . | . | . |
SARC | CAediting_819176 | chr11_62739740_+ | 4.57022088722057e-05 | 0.420271272938467 | . | . | . | . |
BRCA | CAediting_819178 | chr11_62739748_+ | 3.95235006446635e-09 | 0.268374576880259 | . | . | . | . |
COAD | CAediting_819178 | chr11_62739748_+ | 0.046045312708952 | 0.217012774949397 | . | . | . | . |
SARC | CAediting_819178 | chr11_62739748_+ | 0.00155205222023044 | 0.390578692971698 | . | . | . | . |
BRCA | CAediting_819179 | chr11_62739749_+ | 3.1860017863774e-06 | 0.191554955547142 | . | . | . | . |
CESC | CAediting_819179 | chr11_62739749_+ | . | . | . | . | 0.040300166935007 | 0.211935896900142 |
LUAD | CAediting_819179 | chr11_62739749_+ | 3.57666140774816e-05 | 0.289975162203585 | . | . | . | . |
COAD | CAediting_819179 | chr11_62739749_+ | 0.0042017973816547 | 0.320695513657294 | . | . | . | . |
LUSC | CAediting_819179 | chr11_62739749_+ | 0.00487191632309042 | 0.241856324406979 | . | . | . | . |
THCA | CAediting_819179 | chr11_62739749_+ | 0.0137659968787093 | 0.145014663990897 | . | . | . | . |
KIRC | CAediting_819179 | chr11_62739749_+ | 0.00208784701279307 | 0.179095894284413 | . | . | . | . |
UCEC | CAediting_819179 | chr11_62739749_+ | 0.001892879347588 | 0.273101480205892 | 0.0195659656959164 | 0.206957649476667 | . | . |
OV | CAediting_819179 | chr11_62739749_+ | . | . | . | . | 0.0180625978214481 | 0.162264739309443 |
SARC | CAediting_819179 | chr11_62739749_+ | 0.000260825198165244 | 0.40477615506918 | . | . | . | . |
BLCA | CAediting_819181 | chr11_62739762_+ | 3.73324338776506e-08 | 0.321533099701725 | . | . | 0.0212148788727418 | 0.137658236557282 |
BRCA | CAediting_819181 | chr11_62739762_+ | 2.06363604321074e-22 | 0.313701186262689 | . | . | . | . |
LIHC | CAediting_819181 | chr11_62739762_+ | 8.79466641718006e-05 | 0.317741269286564 | . | . | . | . |
CESC | CAediting_819181 | chr11_62739762_+ | 0.00341293359266053 | 0.203590103440134 | . | . | . | . |
LUAD | CAediting_819181 | chr11_62739762_+ | 3.03486008323173e-05 | 0.219131992372206 | . | . | . | . |
COAD | CAediting_819181 | chr11_62739762_+ | 1.35083669787701e-09 | 0.390129170674138 | 0.00636322013348468 | 0.18139570681013 | . | . |
LUSC | CAediting_819181 | chr11_62739762_+ | 0.009126162305066 | 0.142683470399262 | . | . | . | . |
GBM | CAediting_819181 | chr11_62739762_+ | 0.00707469151385271 | 0.236068965820111 | . | . | . | . |
HNSC | CAediting_819181 | chr11_62739762_+ | 0.00228525973219793 | 0.20746362643283 | . | . | . | . |
STAD | CAediting_819181 | chr11_62739762_+ | 0.0262056986531257 | 0.160448835823859 | . | . | . | . |
THCA | CAediting_819181 | chr11_62739762_+ | 7.0058683153938e-06 | 0.207563608316176 | . | . | . | . |
KIRC | CAediting_819181 | chr11_62739762_+ | 0.00521485359010936 | 0.129764828149546 | . | . | . | . |
UCEC | CAediting_819181 | chr11_62739762_+ | 3.61377567270573e-05 | 0.24550174236579 | . | . | . | . |
KIRP | CAediting_819181 | chr11_62739762_+ | 0.00338502059683823 | 0.222903451948793 | . | . | . | . |
ACC | CAediting_819181 | chr11_62739762_+ | 0.0171167798072793 | 0.335813149754434 | . | . | . | . |
ESCA | CAediting_819181 | chr11_62739762_+ | . | . | 0.0213444638094027 | 0.224448711458162 | . | . |
OV | CAediting_819181 | chr11_62739762_+ | 1.33368011823575e-05 | 0.246492539515565 | . | . | . | . |
PAAD | CAediting_819181 | chr11_62739762_+ | 0.0121934349880596 | 0.229123329180755 | . | . | . | . |
PCPG | CAediting_819181 | chr11_62739762_+ | 0.00698452983840302 | 0.264282546506309 | . | . | . | . |
SKCM | CAediting_819181 | chr11_62739762_+ | 3.66679508211217e-16 | 0.419819357105112 | . | . | . | . |
MESO | CAediting_819181 | chr11_62739762_+ | 0.00261813759392543 | 0.359325992191416 | . | . | . | . |
SARC | CAediting_819181 | chr11_62739762_+ | 0.011328403916674 | 0.192130613901238 | . | . | . | . |
TGCT | CAediting_819181 | chr11_62739762_+ | 0.000944744136806218 | 0.332181519457988 | . | . | . | . |
THYM | CAediting_819181 | chr11_62739762_+ | 0.00521653251632889 | 0.298677010724361 | . | . | 0.00249649393807874 | 0.322040002756446 |
BLCA | CAediting_819182 | chr11_62739764_+ | 0.0103637689737211 | 0.170592283419184 | . | . | . | . |
BRCA | CAediting_819182 | chr11_62739764_+ | 5.54978152465325e-08 | 0.193367148374081 | . | . | . | . |
LUAD | CAediting_819182 | chr11_62739764_+ | 0.00201193735879413 | 0.181895467809896 | . | . | . | . |
COAD | CAediting_819182 | chr11_62739764_+ | 0.021654839555674 | 0.168763376484508 | . | . | . | . |
GBM | CAediting_819182 | chr11_62739764_+ | . | . | 0.016144821707564 | 0.243718483747485 | . | . |
PCPG | CAediting_819182 | chr11_62739764_+ | 0.0377970226867742 | 0.247050503286326 | . | . | . | . |
SKCM | CAediting_819182 | chr11_62739764_+ | 0.0129739931487422 | 0.144019274805868 | . | . | . | . |
SARC | CAediting_819182 | chr11_62739764_+ | 0.00105426968749474 | 0.26662453155512 | . | . | . | . |
BLCA | CAediting_819183 | chr11_62739768_+ | 0.000162739168051471 | 0.217463569864459 | 0.020698798923243 | 0.134423539684389 | . | . |
LGG | CAediting_819183 | chr11_62739768_+ | 0.00145683951063409 | 0.19386355033259 | . | . | . | . |
BRCA | CAediting_819183 | chr11_62739768_+ | 4.18118047695413e-10 | 0.205720217514589 | . | . | . | . |
LUAD | CAediting_819183 | chr11_62739768_+ | 3.12712163714429e-07 | 0.260803648407357 | . | . | . | . |
COAD | CAediting_819183 | chr11_62739768_+ | 6.65797372727059e-06 | 0.292095977106492 | . | . | . | . |
LUSC | CAediting_819183 | chr11_62739768_+ | 0.00966153333341777 | 0.140367274693721 | . | . | . | . |
PRAD | CAediting_819183 | chr11_62739768_+ | 0.00710719374410807 | 0.14048370477935 | . | . | . | . |
HNSC | CAediting_819183 | chr11_62739768_+ | 0.0163270044255203 | 0.164782393703946 | . | . | . | . |
THCA | CAediting_819183 | chr11_62739768_+ | 0.00794557353547727 | 0.12443446274848 | . | . | . | . |
UCEC | CAediting_819183 | chr11_62739768_+ | 0.000727205773224996 | 0.200778468052628 | . | . | . | . |
ACC | CAediting_819183 | chr11_62739768_+ | 0.0102758380216505 | 0.356321775623872 | . | . | . | . |
PCPG | CAediting_819183 | chr11_62739768_+ | 0.001439566976241 | 0.305690145024137 | . | . | . | . |
SKCM | CAediting_819183 | chr11_62739768_+ | 4.8266194914439e-07 | 0.263688667176256 | . | . | . | . |
UCS | CAediting_819183 | chr11_62739768_+ | 0.000450345643932666 | 0.477760724346508 | . | . | . | . |
READ | CAediting_819183 | chr11_62739768_+ | 0.0240600268585289 | 0.243182921611161 | . | . | . | . |
SARC | CAediting_819183 | chr11_62739768_+ | 0.000467044578507953 | 0.255397334626682 | . | . | . | . |
TGCT | CAediting_819183 | chr11_62739768_+ | 0.000119307770642193 | 0.3717950998014 | . | . | . | . |
THYM | CAediting_819183 | chr11_62739768_+ | 1.54011240582819e-07 | 0.532688419341165 | . | . | 0.04783910959351 | 0.215294066715083 |
BLCA | CAediting_819189 | chr11_62739810_+ | 3.61555890900969e-05 | 0.268242075837385 | 0.0191218449125513 | 0.154081832120006 | . | . |
LGG | CAediting_819189 | chr11_62739810_+ | 5.15944671133093e-05 | 0.309727702680151 | . | . | . | . |
BRCA | CAediting_819189 | chr11_62739810_+ | 5.00336276164272e-24 | 0.343407638815917 | . | . | . | . |
LIHC | CAediting_819189 | chr11_62739810_+ | 3.7883367967313e-05 | 0.317731500076981 | . | . | . | . |
LUAD | CAediting_819189 | chr11_62739810_+ | 3.58642338769789e-08 | 0.293725314923257 | . | . | . | . |
COAD | CAediting_819189 | chr11_62739810_+ | 0.0115110566931562 | 0.199314521452977 | . | . | . | . |
LUSC | CAediting_819189 | chr11_62739810_+ | 6.15192963678654e-06 | 0.295629137033669 | . | . | 0.0287392945358279 | 0.145511712125212 |
PRAD | CAediting_819189 | chr11_62739810_+ | 0.000256626647082692 | 0.22488079314125 | . | . | . | . |
THCA | CAediting_819189 | chr11_62739810_+ | 0.00103959537821305 | 0.178146710688768 | . | . | . | . |
KIRC | CAediting_819189 | chr11_62739810_+ | 0.00355446789760925 | 0.153908847815428 | . | . | . | . |
UCEC | CAediting_819189 | chr11_62739810_+ | 0.000685824819062727 | 0.214169387392385 | . | . | . | . |
OV | CAediting_819189 | chr11_62739810_+ | 3.43832577006773e-05 | 0.243173481819379 | . | . | . | . |
PCPG | CAediting_819189 | chr11_62739810_+ | 0.000795776433136615 | 0.367582120529548 | . | . | . | . |
SKCM | CAediting_819189 | chr11_62739810_+ | 1.356396879215e-09 | 0.372769577127116 | . | . | . | . |
TGCT | CAediting_819189 | chr11_62739810_+ | 0.0236494624559542 | 0.268359106087279 | . | . | . | . |
THYM | CAediting_819189 | chr11_62739810_+ | 6.1100436598353e-05 | 0.497469931185434 | . | . | . | . |
BLCA | CAediting_819190 | chr11_62739813_+ | 1.81589301019244e-12 | 0.406849563146689 | . | . | . | . |
LGG | CAediting_819190 | chr11_62739813_+ | . | . | 0.0397228982689329 | 0.117642002483743 | . | . |
BRCA | CAediting_819190 | chr11_62739813_+ | 5.58490970508678e-26 | 0.345796909786123 | . | . | . | . |
LIHC | CAediting_819190 | chr11_62739813_+ | 0.000620368413711113 | 0.25988969257367 | . | . | . | . |
CESC | CAediting_819190 | chr11_62739813_+ | 0.0154391186474526 | 0.184426877910407 | 0.0196928839663022 | 0.17770274111288 | . | . |
LUAD | CAediting_819190 | chr11_62739813_+ | 3.34506285210033e-10 | 0.320740875802936 | . | . | . | . |
COAD | CAediting_819190 | chr11_62739813_+ | 0.00205448999557603 | 0.224619947953984 | . | . | . | . |
LUSC | CAediting_819190 | chr11_62739813_+ | 4.09693222066043e-05 | 0.247805273915923 | . | . | . | . |
PRAD | CAediting_819190 | chr11_62739813_+ | 5.25820752727316e-06 | 0.256198142010791 | . | . | . | . |
THCA | CAediting_819190 | chr11_62739813_+ | 2.81611654494174e-07 | 0.252745089465709 | . | . | . | . |
KIRC | CAediting_819190 | chr11_62739813_+ | 0.000111419257796228 | 0.187442130296614 | . | . | . | . |
UCEC | CAediting_819190 | chr11_62739813_+ | 0.00050363039086195 | 0.214268460208335 | . | . | . | . |
OV | CAediting_819190 | chr11_62739813_+ | 0.00698910036136524 | 0.156740167019961 | . | . | . | . |
SKCM | CAediting_819190 | chr11_62739813_+ | 1.2016379996555e-08 | 0.324733075386362 | . | . | . | . |
SARC | CAediting_819190 | chr11_62739813_+ | 1.19347475580988e-07 | 0.385221303032288 | . | . | . | . |
TGCT | CAediting_819190 | chr11_62739813_+ | 9.4279348867925e-05 | 0.422589253616822 | . | . | . | . |
THYM | CAediting_819190 | chr11_62739813_+ | 2.43289131524078e-08 | 0.578017756659741 | . | . | . | . |
BLCA | CAediting_819194 | chr11_62739830_+ | 3.55706186027965e-14 | 0.414485865631195 | . | . | . | . |
LGG | CAediting_819194 | chr11_62739830_+ | . | . | 0.000643921204603865 | 0.175433046762137 | 0.00262999272664523 | 0.154909368412623 |
BRCA | CAediting_819194 | chr11_62739830_+ | 3.07006954594257e-47 | 0.441637527230376 | . | . | . | . |
LIHC | CAediting_819194 | chr11_62739830_+ | 2.7230793837288e-06 | 0.304253291345118 | . | . | . | . |
CESC | CAediting_819194 | chr11_62739830_+ | 9.48937726374953e-07 | 0.324822193248799 | . | . | . | . |
LUAD | CAediting_819194 | chr11_62739830_+ | 1.19440291115118e-12 | 0.350810251242654 | . | . | . | . |
COAD | CAediting_819194 | chr11_62739830_+ | 0.00164218290573901 | 0.201346757765223 | . | . | . | . |
LUSC | CAediting_819194 | chr11_62739830_+ | 7.7419654709356e-09 | 0.301219731654338 | . | . | . | . |
GBM | CAediting_819194 | chr11_62739830_+ | 0.00287482485932714 | 0.264504166060788 | . | . | . | . |
PRAD | CAediting_819194 | chr11_62739830_+ | 4.31437575360187e-08 | 0.275357072943222 | . | . | . | . |
HNSC | CAediting_819194 | chr11_62739830_+ | 0.0140630869991215 | 0.160008556192938 | . | . | . | . |
STAD | CAediting_819194 | chr11_62739830_+ | 0.00222381617171286 | 0.188885399940577 | . | . | . | . |
THCA | CAediting_819194 | chr11_62739830_+ | 8.46240260790539e-07 | 0.226727326117986 | . | . | . | . |
KIRC | CAediting_819194 | chr11_62739830_+ | 0.000170323947228896 | 0.172564935083383 | . | . | . | . |
UCEC | CAediting_819194 | chr11_62739830_+ | 8.59810195700814e-11 | 0.359957850162479 | . | . | . | . |
KIRP | CAediting_819194 | chr11_62739830_+ | 0.0183792691606738 | 0.16619080932627 | . | . | . | . |
ACC | CAediting_819194 | chr11_62739830_+ | 5.20583012590094e-06 | 0.567029543810856 | . | . | . | . |
ESCA | CAediting_819194 | chr11_62739830_+ | . | . | 0.00601094079961034 | 0.254718969733918 | . | . |
OV | CAediting_819194 | chr11_62739830_+ | 8.07340991551116e-07 | 0.261180027533845 | . | . | . | . |
PCPG | CAediting_819194 | chr11_62739830_+ | 0.0112376554841414 | 0.222572816352588 | . | . | . | . |
SKCM | CAediting_819194 | chr11_62739830_+ | 2.39920923709589e-06 | 0.247299874004506 | 0.0320208753464813 | 0.113830996913056 | . | . |
UCS | CAediting_819194 | chr11_62739830_+ | 5.32955129380915e-05 | 0.534558929507158 | . | . | . | . |
MESO | CAediting_819194 | chr11_62739830_+ | . | . | . | . | 0.00234638263365505 | 0.365617845299314 |
READ | CAediting_819194 | chr11_62739830_+ | 0.018935106533042 | 0.249762772356956 | . | . | . | . |
SARC | CAediting_819194 | chr11_62739830_+ | 8.29409848344615e-06 | 0.29943798458426 | . | . | . | . |
TGCT | CAediting_819194 | chr11_62739830_+ | 8.36481813021713e-07 | 0.431991565473776 | . | . | . | . |
THYM | CAediting_819194 | chr11_62739830_+ | 8.24879066075263e-05 | 0.388931227427992 | . | . | . | . |
BLCA | CAediting_819195 | chr11_62739839_+ | 0.000253573711843846 | 0.213285644920788 | . | . | . | . |
LGG | CAediting_819195 | chr11_62739839_+ | . | . | 0.0319163388660338 | 0.11171721521711 | . | . |
BRCA | CAediting_819195 | chr11_62739839_+ | 5.97571710404431e-07 | 0.160447688428257 | . | . | . | . |
LUAD | CAediting_819195 | chr11_62739839_+ | 0.000972549018170433 | 0.171945760368785 | . | . | . | . |
COAD | CAediting_819195 | chr11_62739839_+ | 0.00123862062848956 | 0.199633770734501 | . | . | 0.00281290994337358 | 0.184923576102735 |
LUSC | CAediting_819195 | chr11_62739839_+ | 0.0213605999869799 | 0.129645278383461 | . | . | . | . |
GBM | CAediting_819195 | chr11_62739839_+ | . | . | . | . | 0.0465705071150732 | 0.17836937375327 |
HNSC | CAediting_819195 | chr11_62739839_+ | 0.00123149162471984 | 0.205713881651744 | . | . | . | . |
KICH | CAediting_819195 | chr11_62739839_+ | 0.000990833726600882 | 0.447572963350044 | . | . | . | . |
THCA | CAediting_819195 | chr11_62739839_+ | 0.0228904699551785 | 0.107604664314356 | . | . | . | . |
KIRC | CAediting_819195 | chr11_62739839_+ | 0.0339902716579352 | 0.0984535367932689 | . | . | . | . |
UCEC | CAediting_819195 | chr11_62739839_+ | 0.000298740911381428 | 0.210521910983357 | . | . | . | . |
ACC | CAediting_819195 | chr11_62739839_+ | 0.00979587375222829 | 0.333712099643958 | . | . | . | . |
SKCM | CAediting_819195 | chr11_62739839_+ | 0.000713718202858181 | 0.181608179683271 | . | . | . | . |
MESO | CAediting_819195 | chr11_62739839_+ | 0.00158652902917082 | 0.381256094017636 | . | . | 0.00146297428810797 | 0.383879682523206 |
READ | CAediting_819195 | chr11_62739839_+ | 0.0378554043039102 | 0.213400332685872 | . | . | . | . |
SARC | CAediting_819195 | chr11_62739839_+ | 2.62036847181036e-07 | 0.354415115789282 | . | . | . | . |
TGCT | CAediting_819195 | chr11_62739839_+ | 0.0263353705769103 | 0.213748576678277 | . | . | . | . |
THYM | CAediting_819195 | chr11_62739839_+ | 0.000245359782143473 | 0.377418469902569 | . | . | . | . |
BRCA | CAediting_819198 | chr11_62739873_+ | 1.50365750116027e-05 | 0.249483016055738 | . | . | . | . |
STAD | CAediting_819198 | chr11_62739873_+ | . | . | 0.0492500455490708 | 0.2012745786794 | 8.63462674548019e-05 | 0.389835335563064 |
THCA | CAediting_819198 | chr11_62739873_+ | 0.0222726245238838 | 0.278923241679362 | . | . | . | . |
UCEC | CAediting_819198 | chr11_62739873_+ | 0.02191538310576 | 0.266126668063083 | . | . | . | . |
OV | CAediting_819198 | chr11_62739873_+ | 0.00436633673985133 | 0.2059281035854 | . | . | . | . |
BLCA | CAediting_819200 | chr11_62739890_+ | 0.0401242382934852 | 0.28561021816762 | . | . | . | . |
KIRC | CAediting_819200 | chr11_62739890_+ | 0.0172995980009443 | 0.25465339256511 | . | . | . | . |
SKCM | CAediting_819200 | chr11_62739890_+ | 0.0397880559902275 | 0.259761382635566 | . | . | . | . |
BLCA | CAediting_819201 | chr11_62739891_+ | 7.17932212355992e-09 | 0.360516007411869 | . | . | . | . |
LGG | CAediting_819201 | chr11_62739891_+ | 0.000384998910330673 | 0.26180652810754 | . | . | . | . |
BRCA | CAediting_819201 | chr11_62739891_+ | 1.1543630435103e-21 | 0.316280673091601 | . | . | . | . |
LIHC | CAediting_819201 | chr11_62739891_+ | 0.00186088379295592 | 0.208189975966067 | . | . | . | . |
CESC | CAediting_819201 | chr11_62739891_+ | 0.0113478223338742 | 0.185777617452528 | . | . | . | . |
LUAD | CAediting_819201 | chr11_62739891_+ | 2.04902214243379e-08 | 0.292144161204324 | . | . | . | . |
COAD | CAediting_819201 | chr11_62739891_+ | 0.0240449232276253 | 0.163242960424137 | . | . | . | . |
LUSC | CAediting_819201 | chr11_62739891_+ | 9.3317110176067e-07 | 0.288688327530876 | . | . | . | . |
GBM | CAediting_819201 | chr11_62739891_+ | 0.000880283089012733 | 0.344626952660876 | . | . | . | . |
PRAD | CAediting_819201 | chr11_62739891_+ | 0.000302383000609098 | 0.22757345280968 | . | . | . | . |
HNSC | CAediting_819201 | chr11_62739891_+ | 0.000628326892316243 | 0.233504112073581 | . | . | . | . |
STAD | CAediting_819201 | chr11_62739891_+ | 4.42010780876288e-06 | 0.296814040447797 | . | . | . | . |
THCA | CAediting_819201 | chr11_62739891_+ | 0.000134354519452092 | 0.20712549693057 | . | . | . | . |
KIRC | CAediting_819201 | chr11_62739891_+ | 0.000213255665357414 | 0.181023032477215 | . | . | . | . |
UCEC | CAediting_819201 | chr11_62739891_+ | 3.22609920022385e-05 | 0.249208212490243 | . | . | . | . |
KIRP | CAediting_819201 | chr11_62739891_+ | 0.0201823386279331 | 0.210983444323394 | . | . | . | . |
ESCA | CAediting_819201 | chr11_62739891_+ | 0.0361425859875736 | 0.19150600707967 | . | . | . | . |
OV | CAediting_819201 | chr11_62739891_+ | 5.57559811844465e-06 | 0.243148198917351 | . | . | . | . |
PCPG | CAediting_819201 | chr11_62739891_+ | 0.000282147520875991 | 0.353949867425835 | . | . | . | . |
SKCM | CAediting_819201 | chr11_62739891_+ | 7.80641624716323e-08 | 0.329222075051282 | . | . | . | . |
MESO | CAediting_819201 | chr11_62739891_+ | 0.0428810363155615 | 0.264558390898799 | . | . | . | . |
READ | CAediting_819201 | chr11_62739891_+ | 0.0201336709312332 | 0.28992577954643 | . | . | . | . |
SARC | CAediting_819201 | chr11_62739891_+ | 8.62731233759133e-09 | 0.430636785664643 | . | . | . | . |
TGCT | CAediting_819201 | chr11_62739891_+ | 1.53478368746444e-07 | 0.489594245680909 | . | . | . | . |
THYM | CAediting_819201 | chr11_62739891_+ | 2.86495960913468e-08 | 0.661436429104143 | . | . | 0.0443240770655376 | 0.269811818876854 |
BRCA | CAediting_819202 | chr11_62739903_+ | 3.14539276210416e-10 | 0.352399672013452 | . | . | . | . |
CESC | CAediting_819202 | chr11_62739903_+ | 0.0066284724831404 | 0.371926919295459 | . | . | . | . |
OV | CAediting_819202 | chr11_62739903_+ | 0.00218121661693667 | 0.226377543796909 | . | . | . | . |
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Relation with cancer stages for TTC9C |
Correlation between Cancer stages and RNA editing frequency |
Cancer | Stage_type | CAeditomID | position | P-val | Coeff. |
BLCA | pathologic_stage | CAediting_819058 | chr11_62738827_+ | 0.0265435124121558 | 0.141433792371339 |
BLCA | pathologic_stage | CAediting_819149 | chr11_62739518_+ | 0.00265216760364926 | 0.153763357453023 |
BLCA | pathologic_stage | CAediting_819178 | chr11_62739748_+ | 0.00974629486976394 | 0.242209613482802 |
BLCA | pathologic_stage | CAediting_819181 | chr11_62739762_+ | 0.0227825063819573 | 0.136299279121231 |
BLCA | pathologic_stage | CAediting_819190 | chr11_62739813_+ | 0.0015590256247407 | 0.189890490431874 |
BLCA | pathologic_stage | CAediting_819195 | chr11_62739839_+ | 0.00324562570001919 | 0.17259171118127 |
BRCA | pathologic_stage | CAediting_819060 | chr11_62738836_+ | 0.021616398524067 | 0.309202368214002 |
BRCA | pathologic_stage | CAediting_819099 | chr11_62739071_+ | 0.0459548132056023 | -0.139223755469202 |
BRCA | pathologic_stage | CAediting_819149 | chr11_62739518_+ | 0.015704623797658 | 0.0746777706442543 |
BRCA | pathologic_stage | CAediting_819163 | chr11_62739644_+ | 0.0151565230716068 | 0.0782427172167597 |
BRCA | pathologic_stage | CAediting_819181 | chr11_62739762_+ | 0.00275397151101759 | 0.0997432720969916 |
BRCA | pathologic_stage | CAediting_819182 | chr11_62739764_+ | 0.0224880229248389 | 0.0826089498370578 |
BRCA | pathologic_stage | CAediting_819195 | chr11_62739839_+ | 0.00278206897921857 | 0.0973963272258515 |
CESC | clinical_stage | CAediting_819163 | chr11_62739644_+ | 0.0356211767381178 | -0.143396904585116 |
CESC | clinical_stage | CAediting_819176 | chr11_62739740_+ | 0.0255439926432349 | -0.239380831349354 |
CESC | clinical_stage | CAediting_819183 | chr11_62739768_+ | 0.00334687561895223 | -0.21757294483883 |
CESC | clinical_stage | CAediting_819195 | chr11_62739839_+ | 0.0257847377187888 | -0.15458492933031 |
ESCA | clinical_stage | CAediting_819080 | chr11_62738944_+ | 0.0109266724381513 | -0.403186734049251 |
ESCA | clinical_stage | CAediting_819176 | chr11_62739740_+ | 0.026590534630202 | -0.552103930165531 |
ESCA | clinical_stage | CAediting_819182 | chr11_62739764_+ | 0.0163779387348419 | -0.46616884540997 |
ESCA | pathologic_stage | CAediting_819065 | chr11_62738890_+ | 0.0253469059095773 | -0.227009007853814 |
ESCA | pathologic_stage | CAediting_819149 | chr11_62739518_+ | 0.0263419881655526 | 0.194072307097484 |
ESCA | pathologic_stage | CAediting_819163 | chr11_62739644_+ | 0.0134930716574719 | 0.278661361317024 |
HNSC | clinical_stage | CAediting_819190 | chr11_62739813_+ | 0.0379029344900244 | 0.156626038848957 |
HNSC | pathologic_stage | CAediting_819058 | chr11_62738827_+ | 0.00507399573894156 | 0.188737005465206 |
HNSC | pathologic_stage | CAediting_819163 | chr11_62739644_+ | 0.0237357955395984 | 0.158301273137431 |
HNSC | pathologic_stage | CAediting_819190 | chr11_62739813_+ | 0.0241131085658557 | 0.178825419466358 |
HNSC | pathologic_stage | CAediting_819194 | chr11_62739830_+ | 0.0390851028860075 | 0.144233978808157 |
HNSC | pathologic_stage | CAediting_819201 | chr11_62739891_+ | 0.00620701773307638 | 0.201053615408736 |
KIRC | pathologic_stage | CAediting_819058 | chr11_62738827_+ | 0.048004508398406 | 0.0909697745976714 |
KIRC | pathologic_stage | CAediting_819065 | chr11_62738890_+ | 0.0209209817697346 | 0.142086560281862 |
KIRC | pathologic_stage | CAediting_819080 | chr11_62738944_+ | 0.0236197751865377 | 0.107888396297039 |
KIRC | pathologic_stage | CAediting_819088 | chr11_62739018_+ | 0.0257569421728868 | 0.274426938773343 |
KIRC | pathologic_stage | CAediting_819089 | chr11_62739028_+ | 0.0227343728985154 | 0.189093410186603 |
KIRC | pathologic_stage | CAediting_819112 | chr11_62739166_+ | 0.0325839198331581 | 0.0989190106621032 |
KIRC | pathologic_stage | CAediting_819149 | chr11_62739518_+ | 0.0337619271877535 | 0.0936593819391371 |
KIRC | pathologic_stage | CAediting_819183 | chr11_62739768_+ | 0.00486608718598726 | 0.132666253475282 |
KIRC | pathologic_stage | CAediting_819189 | chr11_62739810_+ | 0.000316935540831603 | 0.190049381963854 |
KIRC | pathologic_stage | CAediting_819190 | chr11_62739813_+ | 0.00363841931765153 | 0.141935294445954 |
KIRC | pathologic_stage | CAediting_819194 | chr11_62739830_+ | 0.000272335015815081 | 0.167529592521487 |
KIRC | pathologic_stage | CAediting_819195 | chr11_62739839_+ | 0.000941397083996129 | 0.153381882310167 |
KIRC | pathologic_stage | CAediting_819201 | chr11_62739891_+ | 0.0032184199077096 | 0.144816483286126 |
KIRP | clinical_stage | CAediting_819080 | chr11_62738944_+ | 0.0268190058743924 | 0.217141443945856 |
KIRP | clinical_stage | CAediting_819181 | chr11_62739762_+ | 0.0397838289178158 | 0.187976001179909 |
KIRP | clinical_stage | CAediting_819183 | chr11_62739768_+ | 0.00158887671753811 | 0.279607985683712 |
KIRP | clinical_stage | CAediting_819190 | chr11_62739813_+ | 0.0136883932858602 | 0.248309211778011 |
KIRP | pathologic_stage | CAediting_819162 | chr11_62739642_+ | 0.0210643654625007 | 0.350861074209155 |
KIRP | pathologic_stage | CAediting_819181 | chr11_62739762_+ | 0.0126288784885051 | 0.199280811812987 |
KIRP | pathologic_stage | CAediting_819183 | chr11_62739768_+ | 0.00196266812946649 | 0.246802092238895 |
KIRP | pathologic_stage | CAediting_819190 | chr11_62739813_+ | 0.0259533920302998 | 0.198389687694069 |
KIRP | pathologic_stage | CAediting_819194 | chr11_62739830_+ | 0.0353665992848124 | 0.157833722725219 |
LIHC | pathologic_stage | CAediting_819182 | chr11_62739764_+ | 0.0234512882213922 | -0.207646256777421 |
LUAD | pathologic_stage | CAediting_819149 | chr11_62739518_+ | 0.0378696754678266 | 0.0934477072236687 |
LUAD | pathologic_stage | CAediting_819172 | chr11_62739716_+ | 0.0416077252294412 | 0.132182357170077 |
LUAD | pathologic_stage | CAediting_819181 | chr11_62739762_+ | 0.0366852007735413 | 0.111885033369676 |
LUAD | pathologic_stage | CAediting_819189 | chr11_62739810_+ | 0.0322325708420033 | 0.117389651999154 |
LUAD | pathologic_stage | CAediting_819201 | chr11_62739891_+ | 0.0165760952102056 | 0.128184106665194 |
LUSC | pathologic_stage | CAediting_819149 | chr11_62739518_+ | 1.25449877274162e-05 | 0.198519117857701 |
LUSC | pathologic_stage | CAediting_819166 | chr11_62739654_+ | 0.0142182738190028 | 0.257654301722273 |
LUSC | pathologic_stage | CAediting_819181 | chr11_62739762_+ | 0.000422290114537861 | 0.192702156380252 |
LUSC | pathologic_stage | CAediting_819183 | chr11_62739768_+ | 0.00923422170704659 | 0.141410239144561 |
LUSC | pathologic_stage | CAediting_819189 | chr11_62739810_+ | 0.0353974032234202 | 0.141285207001086 |
LUSC | pathologic_stage | CAediting_819190 | chr11_62739813_+ | 0.0293273331481228 | 0.133888168115796 |
LUSC | pathologic_stage | CAediting_819202 | chr11_62739903_+ | 0.0278497561334231 | 0.266807369630102 |
READ | pathologic_stage | CAediting_819149 | chr11_62739518_+ | 0.0375523852960962 | -0.175344496516744 |
SKCM | pathologic_stage | CAediting_819149 | chr11_62739518_+ | 0.0342094280803279 | 0.106989174735451 |
SKCM | pathologic_stage | CAediting_819162 | chr11_62739642_+ | 0.0171429165415157 | 0.267535216201976 |
SKCM | pathologic_stage | CAediting_819179 | chr11_62739749_+ | 0.00352107540727904 | 0.249490697218816 |
SKCM | pathologic_stage | CAediting_819182 | chr11_62739764_+ | 0.01154730536885 | 0.155238302157193 |
STAD | pathologic_stage | CAediting_819176 | chr11_62739740_+ | 0.0222182612975867 | 0.214031856977827 |
TGCT | pathologic_stage | CAediting_819112 | chr11_62739166_+ | 0.0246454878703045 | -0.302778132569126 |
THCA | pathologic_stage | CAediting_819058 | chr11_62738827_+ | 0.0118044796415973 | 0.122040403948199 |
THCA | pathologic_stage | CAediting_819112 | chr11_62739166_+ | 0.0178573964456117 | 0.114447042868732 |
THCA | pathologic_stage | CAediting_819163 | chr11_62739644_+ | 0.0329225182016134 | 0.0994767527707784 |
THCA | pathologic_stage | CAediting_819166 | chr11_62739654_+ | 0.00178548994062061 | 0.261735399538128 |
THCA | pathologic_stage | CAediting_819179 | chr11_62739749_+ | 0.0228392686349311 | 0.135038783141192 |
THCA | pathologic_stage | CAediting_819182 | chr11_62739764_+ | 0.0244200697790187 | 0.11279966228171 |
THCA | pathologic_stage | CAediting_819183 | chr11_62739768_+ | 0.0108616205850394 | 0.120239126343764 |
THCA | pathologic_stage | CAediting_819194 | chr11_62739830_+ | 0.000926620661046356 | 0.154585313188342 |
THCA | pathologic_stage | CAediting_819195 | chr11_62739839_+ | 0.0324146881505737 | 0.101778026363747 |
THCA | pathologic_stage | CAediting_819201 | chr11_62739891_+ | 0.0326219622724775 | 0.11730422713442 |
UCEC | clinical_stage | CAediting_819148 | chr11_62739500_+ | 0.0139499633152082 | 0.18609243384889 |
UCEC | clinical_stage | CAediting_819201 | chr11_62739891_+ | 0.0457203546059477 | 0.121255544599555 |
UCS | clinical_stage | CAediting_819149 | chr11_62739518_+ | 0.025607380995366 | -0.30364613895192 |
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Relation with survival for TTC9C |
Correlation between RNA editing and survival |
Cancer | CAeditomID | position | KMpvalue | Coxpvalue | CoxHR |
LIHC | CAediting_819202 | chr11_62739903_+ | 0.016675736870419 | 0.0394118 | 0.0022257 |
CESC | CAediting_819176 | chr11_62739740_+ | 0.0444687429162532 | 0.0400573 | 2.63777e-06 |
ESCA | CAediting_819148 | chr11_62739500_+ | 0.0493863786968367 | 0.0215943 | 287.024 |
ESCA | CAediting_819189 | chr11_62739810_+ | 0.0216142892162181 | 0.0357389 | 0.00794674 |
OV | CAediting_819166 | chr11_62739654_+ | 0.00239568220972664 | 0.00293296 | 44.1771 |
PAAD | CAediting_819163 | chr11_62739644_+ | 0.00217945862814561 | 0.00668109 | 15.6893 |
MESO | CAediting_819182 | chr11_62739764_+ | 0.0306308133935517 | 0.0330979 | 124.852 |
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RelatedDrugs for TTC9C |
Approved drugs targeting this gene. (DrugBank Version 5.1.8 2021-01-03) |
Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for TTC9C |
Diseases associated with this gene. (DisGeNet 7.0) |
Gene | Disease ID | Disease name | # pubmeds | Source |
TTC9C | C0033578 | Prostatic Neoplasms | 1 | CTD_human |
TTC9C | C0376358 | Malignant neoplasm of prostate | 1 | CTD_human |