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| Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples |
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| The effects of the RNA editing to the stability of the RNA structures |
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Editing gene: GOLGA3 (CAeditome ID:2802) |
Gene summary for GOLGA3 |
 Gene summary |
| Gene information | Gene symbol | GOLGA3 | Gene ID | 2802 |
| Gene name | golgin A3 | |
| Synonyms | GCP170|MEA-2 | |
| Cytomap | 12q24.33 | |
| Type of gene | protein-coding | |
| Description | golgin subfamily A member 3Golgi membrane associated proteinGolgi peripheral membrane proteinSY2/SY10 proteingolgi autoantigen, golgin subfamily a, 3golgi complex-associated protein of 170 kDagolgin-160golgin-165male enhanced antigen-2 | |
| Modification date | 20210529 | |
| UniProtAcc | Q08378 | |
| Context |
| Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Gene | GO ID | GO term | PubMed ID |
| GOLGA3 | GO:0005654 | Golgin subfamily A member 3 | 0000052 |
| GOLGA3 | GO:0005730 | Golgin subfamily A member 3 | 0000052 |
| GOLGA3 | GO:0005794 | Golgin subfamily A member 3 | 0000052 |
| GOLGA3 | GO:0005829 | Golgin subfamily A member 3 | 14522980 |
| GOLGA3 | GO:0090498 | Golgin subfamily A member 3 | 14522980 |
Top |
RNA A-to-I events for GOLGA3 |
| RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure. |
 |
| RNA editing frequencies across 33 cancers of gene: ENSG00000090615.11 |
 |
| RNA A-to-I editing events in Cancer. |
| CAediting_949243(132769944, -), CAediting_949244(132769968, -), CAediting_949245(132769969, -), CAediting_949246(132769976, -), CAediting_949247(132769978, -), CAediting_949248(132769981, -), CAediting_949249(132769990, -), CAediting_949250(132770000, -), CAediting_949251(132770006, -), CAediting_949252(132770022, -), CAediting_949253(132770029, -), CAediting_949254(132770042, -), CAediting_949255(132770054, -), CAediting_949256(132770070, -), CAediting_949257(132770076, -), CAediting_949258(132770085, -), CAediting_949259(132770090, -), CAediting_949260(132770093, -), CAediting_949261(132770095, -), CAediting_949262(132770109, -), CAediting_949263(132770111, -), CAediting_949264(132770114, -), CAediting_949265(132770121, -), CAediting_949266(132770124, -), CAediting_949267(132770150, -), CAediting_949268(132770151, -), CAediting_949269(132770171, -), CAediting_949270(132770176, -), CAediting_949271(132770186, -), CAediting_949272(132770195, -), CAediting_949273(132770227, -), CAediting_949274(132770231, -), CAediting_949275(132770670, -), CAediting_949276(132770672, -), CAediting_949277(132770673, -), CAediting_949278(132770682, -), CAediting_949279(132770692, -), CAediting_949280(132770711, -), CAediting_949281(132770724, -), CAediting_949282(132770731, -), CAediting_949283(132770732, -), CAediting_949284(132770740, -), CAediting_949285(132770746, -), CAediting_949286(132770750, -), CAediting_949287(132770763, -), CAediting_949288(132770767, -), CAediting_949289(132770772, -), CAediting_949290(132770773, -), CAediting_949291(132770775, -), CAediting_949292(132770779, -), CAediting_949293(132770786, -), CAediting_949294(132770799, -), CAediting_949295(132770802, -), CAediting_949296(132770803, -), CAediting_949297(132770804, -), CAediting_949298(132770805, -), CAediting_949299(132770806, -), CAediting_949300(132770808, -), CAediting_949301(132770810, -), CAediting_949302(132770813, -), CAediting_949303(132770814, -), CAediting_949304(132770828, -), CAediting_949305(132770830, -), CAediting_949306(132770831, -), CAediting_949307(132770851, -), CAediting_949308(132770853, -), CAediting_949309(132770862, -), CAediting_949310(132770867, -), CAediting_949311(132770872, -), CAediting_949312(132770885, -), CAediting_949313(132770891, -), CAediting_949314(132770902, -), CAediting_949315(132770907, -), CAediting_949316(132770916, -), CAediting_949317(132770947, -), CAediting_949318(132770948, -), CAediting_949319(132772278, -), CAediting_949320(132772285, -), CAediting_949321(132772299, -), CAediting_949322(132772300, -), CAediting_949323(132772309, -), CAediting_949324(132772314, -), CAediting_949325(132772322, -), CAediting_949326(132772326, -), CAediting_949327(132772327, -), CAediting_949328(132772352, -), CAediting_949329(132772364, -), CAediting_949330(132772378, -), CAediting_949331(132772381, -), CAediting_949332(132772396, -), CAediting_949333(132772406, -), CAediting_949334(132772409, -), CAediting_949335(132772420, -), CAediting_949336(132772422, -), CAediting_949337(132772432, -), CAediting_949338(132772457, -), CAediting_949339(132772462, -), CAediting_949340(132772518, -), CAediting_949341(132772538, -), CAediting_949342(132772540, -), CAediting_949343(132778771, -), CAediting_949344(132778812, -), CAediting_949345(132779325, -), CAediting_949346(132779352, -), CAediting_949347(132782620, -), CAediting_949348(132782634, -), CAediting_949349(132782672, -), CAediting_949350(132782674, -), CAediting_949351(132782697, -), CAediting_949352(132782714, -), CAediting_949353(132782729, -), CAediting_949354(132782752, -), CAediting_949355(132782754, -), CAediting_949356(132782764, -), CAediting_949357(132782767, -), CAediting_949358(132782793, -), CAediting_949359(132782819, -), CAediting_949360(132782824, -), CAediting_949361(132782830, -), CAediting_949362(132782832, -), CAediting_949363(132782963, -), CAediting_949364(132782975, -), CAediting_949365(132782976, -), CAediting_949366(132783024, -), CAediting_949367(132783028, -), CAediting_949368(132783030, -), CAediting_949369(132783039, -), CAediting_949370(132783048, -), CAediting_949371(132783072, -), CAediting_949372(132783074, -), CAediting_949373(132783077, -), CAediting_949374(132783078, -), CAediting_949375(132783084, -), CAediting_949376(132783109, -), CAediting_949377(132783113, -), CAediting_949378(132783114, -), CAediting_949379(132783120, -), CAediting_949380(132783134, -), CAediting_949381(132783150, -), CAediting_949382(132783176, -), CAediting_949383(132783184, -), CAediting_949384(132783186, -), CAediting_949385(132783188, -), CAediting_949386(132783612, -), CAediting_949387(132783646, -), CAediting_949388(132783647, -), CAediting_949389(132783662, -), CAediting_949390(132783674, -), CAediting_949391(132783675, -), CAediting_949392(132783689, -), CAediting_949393(132783706, -), CAediting_949394(132783716, -), CAediting_949395(132783742, -), CAediting_949396(132783745, -), CAediting_949397(132783746, -), CAediting_949398(132783747, -), CAediting_949399(132783748, -), CAediting_949400(132783754, -), CAediting_949401(132783755, -), CAediting_949402(132783757, -), CAediting_949403(132783760, -), CAediting_949404(132783766, -), CAediting_949405(132783771, -), CAediting_949406(132783772, -), CAediting_949407(132783773, -), CAediting_949408(132783791, -), CAediting_949409(132783848, -), CAediting_949410(132783849, -), CAediting_949411(132783857, -), CAediting_949412(132783870, -), CAediting_949413(132795639, -), CAediting_949414(132795649, -), CAediting_949415(132795685, -), CAediting_949416(132799442, -), CAediting_949417(132799445, -), CAediting_949418(132799471, -), CAediting_949419(132799472, -), CAediting_949420(132799517, -), CAediting_949421(132799554, -), CAediting_949422(132799556, -), CAediting_949423(132799588, -), CAediting_949424(132799606, -), CAediting_949425(132799637, -), CAediting_949426(132799769, -), CAediting_949427(132799771, -), CAediting_949428(132799808, -), CAediting_949429(132799837, -), CAediting_949430(132799869, -), CAediting_949431(132799873, -), CAediting_949432(132799879, -), CAediting_949433(132799901, -), CAediting_949434(132800013, -), CAediting_949435(132800014, -), CAediting_949436(132800027, -), CAediting_949437(132800030, -), CAediting_949438(132800309, -), CAediting_949439(132800372, -), CAediting_949440(132800394, -), CAediting_949441(132800726, -), CAediting_949442(132800767, -), CAediting_949443(132800793, -), CAediting_949444(132800824, -), CAediting_949445(132800837, -), CAediting_949446(132800877, -), CAediting_949447(132800883, -), CAediting_949448(132800890, -), CAediting_949449(132800891, -), CAediting_949450(132800907, -), CAediting_949451(132800957, -), CAediting_949452(132809203, -), CAediting_949453(132809847, -), CAediting_949454(132809853, -), CAediting_949455(132809854, -), CAediting_949456(132812102, -), CAediting_949457(132812106, -), CAediting_949458(132812111, -), CAediting_949459(132812161, -), CAediting_949460(132813822, -), CAediting_949461(132813836, -), CAediting_949462(132813863, -), CAediting_949463(132813889, -), CAediting_949464(132814162, -), CAediting_949465(132814163, -), CAediting_949466(132814297, -), CAediting_949467(132814299, -), CAediting_949468(132815637, -), CAediting_949469(132815651, -), CAediting_949470(132815727, -), CAediting_949471(132815778, -), CAediting_949472(132818313, -), CAediting_949473(132818356, -), CAediting_949474(132818374, -), CAediting_949475(132818381, -), CAediting_949476(132818388, -), CAediting_949477(132818397, -), CAediting_949478(132818398, -), CAediting_949479(132818404, -), CAediting_949480(132818420, -), CAediting_949481(132818465, -), CAediting_949482(132818488, -), CAediting_949483(132818527, -), CAediting_949484(132820093, -), CAediting_949485(132820287, -), CAediting_949486(132820865, -), CAediting_949487(132823804, -), CAediting_949488(132823838, -), |
Top |
RNA editing positional annotations for GOLGA3 using Annovar |
| Protein coding RNA editing(s). |
| CAeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
| Gene structure information of RNA editing(s). |
| CAeditome ID | Position | Variant type |
| CAediting_949243 | chr12_132769944_- | UTR3 |
| CAediting_949244 | chr12_132769968_- | UTR3 |
| CAediting_949245 | chr12_132769969_- | UTR3 |
| CAediting_949246 | chr12_132769976_- | UTR3 |
| CAediting_949247 | chr12_132769978_- | UTR3 |
| CAediting_949248 | chr12_132769981_- | UTR3 |
| CAediting_949249 | chr12_132769990_- | UTR3 |
| CAediting_949250 | chr12_132770000_- | UTR3 |
| CAediting_949251 | chr12_132770006_- | UTR3 |
| CAediting_949252 | chr12_132770022_- | UTR3 |
| CAediting_949253 | chr12_132770029_- | UTR3 |
| CAediting_949254 | chr12_132770042_- | UTR3 |
| CAediting_949255 | chr12_132770054_- | UTR3 |
| CAediting_949256 | chr12_132770070_- | UTR3 |
| CAediting_949257 | chr12_132770076_- | UTR3 |
| CAediting_949258 | chr12_132770085_- | UTR3 |
| CAediting_949259 | chr12_132770090_- | UTR3 |
| CAediting_949260 | chr12_132770093_- | UTR3 |
| CAediting_949261 | chr12_132770095_- | UTR3 |
| CAediting_949262 | chr12_132770109_- | UTR3 |
| CAediting_949263 | chr12_132770111_- | UTR3 |
| CAediting_949264 | chr12_132770114_- | UTR3 |
| CAediting_949265 | chr12_132770121_- | UTR3 |
| CAediting_949266 | chr12_132770124_- | UTR3 |
| CAediting_949267 | chr12_132770150_- | UTR3 |
| CAediting_949268 | chr12_132770151_- | UTR3 |
| CAediting_949269 | chr12_132770171_- | UTR3 |
| CAediting_949270 | chr12_132770176_- | UTR3 |
| CAediting_949271 | chr12_132770186_- | UTR3 |
| CAediting_949272 | chr12_132770195_- | UTR3 |
| CAediting_949273 | chr12_132770227_- | UTR3 |
| CAediting_949274 | chr12_132770231_- | UTR3 |
| CAediting_949275 | chr12_132770670_- | UTR3 |
| CAediting_949276 | chr12_132770672_- | UTR3 |
| CAediting_949277 | chr12_132770673_- | UTR3 |
| CAediting_949278 | chr12_132770682_- | UTR3 |
| CAediting_949279 | chr12_132770692_- | UTR3 |
| CAediting_949280 | chr12_132770711_- | UTR3 |
| CAediting_949281 | chr12_132770724_- | UTR3 |
| CAediting_949282 | chr12_132770731_- | UTR3 |
| CAediting_949283 | chr12_132770732_- | UTR3 |
| CAediting_949284 | chr12_132770740_- | UTR3 |
| CAediting_949285 | chr12_132770746_- | UTR3 |
| CAediting_949286 | chr12_132770750_- | UTR3 |
| CAediting_949287 | chr12_132770763_- | UTR3 |
| CAediting_949288 | chr12_132770767_- | UTR3 |
| CAediting_949289 | chr12_132770772_- | UTR3 |
| CAediting_949290 | chr12_132770773_- | UTR3 |
| CAediting_949291 | chr12_132770775_- | UTR3 |
| CAediting_949292 | chr12_132770779_- | UTR3 |
| CAediting_949293 | chr12_132770786_- | UTR3 |
| CAediting_949294 | chr12_132770799_- | UTR3 |
| CAediting_949295 | chr12_132770802_- | UTR3 |
| CAediting_949296 | chr12_132770803_- | UTR3 |
| CAediting_949297 | chr12_132770804_- | UTR3 |
| CAediting_949298 | chr12_132770805_- | UTR3 |
| CAediting_949299 | chr12_132770806_- | UTR3 |
| CAediting_949300 | chr12_132770808_- | UTR3 |
| CAediting_949301 | chr12_132770810_- | UTR3 |
| CAediting_949302 | chr12_132770813_- | UTR3 |
| CAediting_949303 | chr12_132770814_- | UTR3 |
| CAediting_949304 | chr12_132770828_- | UTR3 |
| CAediting_949305 | chr12_132770830_- | UTR3 |
| CAediting_949306 | chr12_132770831_- | UTR3 |
| CAediting_949307 | chr12_132770851_- | UTR3 |
| CAediting_949308 | chr12_132770853_- | UTR3 |
| CAediting_949309 | chr12_132770862_- | UTR3 |
| CAediting_949310 | chr12_132770867_- | UTR3 |
| CAediting_949311 | chr12_132770872_- | UTR3 |
| CAediting_949312 | chr12_132770885_- | UTR3 |
| CAediting_949313 | chr12_132770891_- | UTR3 |
| CAediting_949314 | chr12_132770902_- | UTR3 |
| CAediting_949315 | chr12_132770907_- | UTR3 |
| CAediting_949316 | chr12_132770916_- | UTR3 |
| CAediting_949317 | chr12_132770947_- | UTR3 |
| CAediting_949318 | chr12_132770948_- | UTR3 |
| CAediting_949319 | chr12_132772278_- | UTR3 |
| CAediting_949320 | chr12_132772285_- | UTR3 |
| CAediting_949321 | chr12_132772299_- | UTR3 |
| CAediting_949322 | chr12_132772300_- | UTR3 |
| CAediting_949323 | chr12_132772309_- | UTR3 |
| CAediting_949324 | chr12_132772314_- | UTR3 |
| CAediting_949325 | chr12_132772322_- | UTR3 |
| CAediting_949326 | chr12_132772326_- | UTR3 |
| CAediting_949327 | chr12_132772327_- | UTR3 |
| CAediting_949328 | chr12_132772352_- | UTR3 |
| CAediting_949329 | chr12_132772364_- | UTR3 |
| CAediting_949330 | chr12_132772378_- | UTR3 |
| CAediting_949331 | chr12_132772381_- | UTR3 |
| CAediting_949332 | chr12_132772396_- | UTR3 |
| CAediting_949333 | chr12_132772406_- | UTR3 |
| CAediting_949334 | chr12_132772409_- | UTR3 |
| CAediting_949335 | chr12_132772420_- | UTR3 |
| CAediting_949336 | chr12_132772422_- | UTR3 |
| CAediting_949337 | chr12_132772432_- | UTR3 |
| CAediting_949338 | chr12_132772457_- | UTR3 |
| CAediting_949339 | chr12_132772462_- | UTR3 |
| CAediting_949340 | chr12_132772518_- | UTR3 |
| CAediting_949341 | chr12_132772538_- | UTR3 |
| CAediting_949342 | chr12_132772540_- | UTR3 |
| CAediting_949343 | chr12_132778771_- | intronic |
| CAediting_949344 | chr12_132778812_- | intronic |
| CAediting_949345 | chr12_132779325_- | intronic |
| CAediting_949346 | chr12_132779352_- | intronic |
| CAediting_949347 | chr12_132782620_- | intronic |
| CAediting_949348 | chr12_132782634_- | intronic |
| CAediting_949349 | chr12_132782672_- | intronic |
| CAediting_949350 | chr12_132782674_- | intronic |
| CAediting_949351 | chr12_132782697_- | intronic |
| CAediting_949352 | chr12_132782714_- | intronic |
| CAediting_949353 | chr12_132782729_- | intronic |
| CAediting_949354 | chr12_132782752_- | intronic |
| CAediting_949355 | chr12_132782754_- | intronic |
| CAediting_949356 | chr12_132782764_- | intronic |
| CAediting_949357 | chr12_132782767_- | intronic |
| CAediting_949358 | chr12_132782793_- | intronic |
| CAediting_949359 | chr12_132782819_- | intronic |
| CAediting_949360 | chr12_132782824_- | intronic |
| CAediting_949361 | chr12_132782830_- | intronic |
| CAediting_949362 | chr12_132782832_- | intronic |
| CAediting_949363 | chr12_132782963_- | intronic |
| CAediting_949364 | chr12_132782975_- | intronic |
| CAediting_949365 | chr12_132782976_- | intronic |
| CAediting_949366 | chr12_132783024_- | intronic |
| CAediting_949367 | chr12_132783028_- | intronic |
| CAediting_949368 | chr12_132783030_- | intronic |
| CAediting_949369 | chr12_132783039_- | intronic |
| CAediting_949370 | chr12_132783048_- | intronic |
| CAediting_949371 | chr12_132783072_- | intronic |
| CAediting_949372 | chr12_132783074_- | intronic |
| CAediting_949373 | chr12_132783077_- | intronic |
| CAediting_949374 | chr12_132783078_- | intronic |
| CAediting_949375 | chr12_132783084_- | intronic |
| CAediting_949376 | chr12_132783109_- | intronic |
| CAediting_949377 | chr12_132783113_- | intronic |
| CAediting_949378 | chr12_132783114_- | intronic |
| CAediting_949379 | chr12_132783120_- | intronic |
| CAediting_949380 | chr12_132783134_- | intronic |
| CAediting_949381 | chr12_132783150_- | intronic |
| CAediting_949382 | chr12_132783176_- | intronic |
| CAediting_949383 | chr12_132783184_- | intronic |
| CAediting_949384 | chr12_132783186_- | intronic |
| CAediting_949385 | chr12_132783188_- | intronic |
| CAediting_949386 | chr12_132783612_- | intronic |
| CAediting_949387 | chr12_132783646_- | intronic |
| CAediting_949388 | chr12_132783647_- | intronic |
| CAediting_949389 | chr12_132783662_- | intronic |
| CAediting_949390 | chr12_132783674_- | intronic |
| CAediting_949391 | chr12_132783675_- | intronic |
| CAediting_949392 | chr12_132783689_- | intronic |
| CAediting_949393 | chr12_132783706_- | intronic |
| CAediting_949394 | chr12_132783716_- | intronic |
| CAediting_949395 | chr12_132783742_- | intronic |
| CAediting_949396 | chr12_132783745_- | intronic |
| CAediting_949397 | chr12_132783746_- | intronic |
| CAediting_949398 | chr12_132783747_- | intronic |
| CAediting_949399 | chr12_132783748_- | intronic |
| CAediting_949400 | chr12_132783754_- | intronic |
| CAediting_949401 | chr12_132783755_- | intronic |
| CAediting_949402 | chr12_132783757_- | intronic |
| CAediting_949403 | chr12_132783760_- | intronic |
| CAediting_949404 | chr12_132783766_- | intronic |
| CAediting_949405 | chr12_132783771_- | intronic |
| CAediting_949406 | chr12_132783772_- | intronic |
| CAediting_949407 | chr12_132783773_- | intronic |
| CAediting_949408 | chr12_132783791_- | intronic |
| CAediting_949409 | chr12_132783848_- | intronic |
| CAediting_949410 | chr12_132783849_- | intronic |
| CAediting_949411 | chr12_132783857_- | intronic |
| CAediting_949412 | chr12_132783870_- | ncRNA_exonic |
| CAediting_949413 | chr12_132795639_- | ncRNA_intronic |
| CAediting_949414 | chr12_132795649_- | ncRNA_intronic |
| CAediting_949415 | chr12_132795685_- | ncRNA_intronic |
| CAediting_949416 | chr12_132799442_- | ncRNA_intronic |
| CAediting_949417 | chr12_132799445_- | ncRNA_intronic |
| CAediting_949418 | chr12_132799471_- | ncRNA_intronic |
| CAediting_949419 | chr12_132799472_- | ncRNA_intronic |
| CAediting_949420 | chr12_132799517_- | ncRNA_intronic |
| CAediting_949421 | chr12_132799554_- | ncRNA_intronic |
| CAediting_949422 | chr12_132799556_- | ncRNA_intronic |
| CAediting_949423 | chr12_132799588_- | ncRNA_intronic |
| CAediting_949424 | chr12_132799606_- | ncRNA_intronic |
| CAediting_949425 | chr12_132799637_- | ncRNA_intronic |
| CAediting_949426 | chr12_132799769_- | ncRNA_intronic |
| CAediting_949427 | chr12_132799771_- | ncRNA_intronic |
| CAediting_949428 | chr12_132799808_- | ncRNA_intronic |
| CAediting_949429 | chr12_132799837_- | ncRNA_intronic |
| CAediting_949430 | chr12_132799869_- | ncRNA_intronic |
| CAediting_949431 | chr12_132799873_- | ncRNA_intronic |
| CAediting_949432 | chr12_132799879_- | ncRNA_intronic |
| CAediting_949433 | chr12_132799901_- | ncRNA_intronic |
| CAediting_949434 | chr12_132800013_- | ncRNA_intronic |
| CAediting_949435 | chr12_132800014_- | ncRNA_intronic |
| CAediting_949436 | chr12_132800027_- | ncRNA_intronic |
| CAediting_949437 | chr12_132800030_- | ncRNA_intronic |
| CAediting_949438 | chr12_132800309_- | ncRNA_intronic |
| CAediting_949439 | chr12_132800372_- | ncRNA_intronic |
| CAediting_949440 | chr12_132800394_- | ncRNA_intronic |
| CAediting_949441 | chr12_132800726_- | ncRNA_intronic |
| CAediting_949442 | chr12_132800767_- | ncRNA_intronic |
| CAediting_949443 | chr12_132800793_- | ncRNA_intronic |
| CAediting_949444 | chr12_132800824_- | ncRNA_intronic |
| CAediting_949445 | chr12_132800837_- | ncRNA_intronic |
| CAediting_949446 | chr12_132800877_- | ncRNA_intronic |
| CAediting_949447 | chr12_132800883_- | ncRNA_intronic |
| CAediting_949448 | chr12_132800890_- | ncRNA_intronic |
| CAediting_949449 | chr12_132800891_- | ncRNA_intronic |
| CAediting_949450 | chr12_132800907_- | ncRNA_intronic |
| CAediting_949451 | chr12_132800957_- | ncRNA_intronic |
| CAediting_949452 | chr12_132809203_- | ncRNA_intronic |
| CAediting_949453 | chr12_132809847_- | ncRNA_intronic |
| CAediting_949454 | chr12_132809853_- | ncRNA_intronic |
| CAediting_949455 | chr12_132809854_- | ncRNA_intronic |
| CAediting_949456 | chr12_132812102_- | ncRNA_intronic |
| CAediting_949457 | chr12_132812106_- | ncRNA_intronic |
| CAediting_949458 | chr12_132812111_- | ncRNA_intronic |
| CAediting_949459 | chr12_132812161_- | ncRNA_intronic |
| CAediting_949460 | chr12_132813822_- | ncRNA_intronic |
| CAediting_949461 | chr12_132813836_- | ncRNA_intronic |
| CAediting_949462 | chr12_132813863_- | ncRNA_intronic |
| CAediting_949463 | chr12_132813889_- | ncRNA_intronic |
| CAediting_949464 | chr12_132814162_- | ncRNA_intronic |
| CAediting_949465 | chr12_132814163_- | ncRNA_intronic |
| CAediting_949466 | chr12_132814297_- | ncRNA_intronic |
| CAediting_949467 | chr12_132814299_- | ncRNA_intronic |
| CAediting_949468 | chr12_132815637_- | ncRNA_intronic |
| CAediting_949469 | chr12_132815651_- | ncRNA_intronic |
| CAediting_949470 | chr12_132815727_- | ncRNA_intronic |
| CAediting_949471 | chr12_132815778_- | ncRNA_intronic |
| CAediting_949472 | chr12_132818313_- | ncRNA_intronic |
| CAediting_949473 | chr12_132818356_- | ncRNA_intronic |
| CAediting_949474 | chr12_132818374_- | ncRNA_intronic |
| CAediting_949475 | chr12_132818381_- | ncRNA_intronic |
| CAediting_949476 | chr12_132818388_- | ncRNA_intronic |
| CAediting_949477 | chr12_132818397_- | ncRNA_intronic |
| CAediting_949478 | chr12_132818398_- | ncRNA_intronic |
| CAediting_949479 | chr12_132818404_- | ncRNA_intronic |
| CAediting_949480 | chr12_132818420_- | ncRNA_intronic |
| CAediting_949481 | chr12_132818465_- | ncRNA_intronic |
| CAediting_949482 | chr12_132818488_- | ncRNA_intronic |
| CAediting_949483 | chr12_132818527_- | ncRNA_intronic |
| CAediting_949484 | chr12_132820093_- | ncRNA_intronic |
| CAediting_949485 | chr12_132820287_- | ncRNA_intronic |
| CAediting_949486 | chr12_132820865_- | ncRNA_intronic |
| CAediting_949487 | chr12_132823804_- | ncRNA_intronic |
| CAediting_949488 | chr12_132823838_- | ncRNA_intronic |
| Repat-regional RNA editing(s). |
| CAeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
| CAediting_949244 | chr12_132769968_- | SINE | Alu | AluSx1 |
| CAediting_949245 | chr12_132769969_- | SINE | Alu | AluSx1 |
| CAediting_949246 | chr12_132769976_- | SINE | Alu | AluSx1 |
| CAediting_949247 | chr12_132769978_- | SINE | Alu | AluSx1 |
| CAediting_949248 | chr12_132769981_- | SINE | Alu | AluSx1 |
| CAediting_949249 | chr12_132769990_- | SINE | Alu | AluSx1 |
| CAediting_949250 | chr12_132770000_- | SINE | Alu | AluSx1 |
| CAediting_949251 | chr12_132770006_- | SINE | Alu | AluSx1 |
| CAediting_949252 | chr12_132770022_- | SINE | Alu | AluSx1 |
| CAediting_949253 | chr12_132770029_- | SINE | Alu | AluSx1 |
| CAediting_949254 | chr12_132770042_- | SINE | Alu | AluSx1 |
| CAediting_949255 | chr12_132770054_- | SINE | Alu | AluSx1 |
| CAediting_949256 | chr12_132770070_- | SINE | Alu | AluSx1 |
| CAediting_949257 | chr12_132770076_- | SINE | Alu | AluSx1 |
| CAediting_949258 | chr12_132770085_- | SINE | Alu | AluSx1 |
| CAediting_949259 | chr12_132770090_- | SINE | Alu | AluSx1 |
| CAediting_949260 | chr12_132770093_- | SINE | Alu | AluSx1 |
| CAediting_949261 | chr12_132770095_- | SINE | Alu | AluSx1 |
| CAediting_949262 | chr12_132770109_- | SINE | Alu | AluSx1 |
| CAediting_949263 | chr12_132770111_- | SINE | Alu | AluSx1 |
| CAediting_949264 | chr12_132770114_- | SINE | Alu | AluSx1 |
| CAediting_949265 | chr12_132770121_- | SINE | Alu | AluSx1 |
| CAediting_949266 | chr12_132770124_- | SINE | Alu | AluSx1 |
| CAediting_949267 | chr12_132770150_- | SINE | Alu | AluSx1 |
| CAediting_949268 | chr12_132770151_- | SINE | Alu | AluSx1 |
| CAediting_949269 | chr12_132770171_- | SINE | Alu | AluSx1 |
| CAediting_949270 | chr12_132770176_- | SINE | Alu | AluSx1 |
| CAediting_949271 | chr12_132770186_- | SINE | Alu | AluSx1 |
| CAediting_949272 | chr12_132770195_- | SINE | Alu | AluSx1 |
| CAediting_949273 | chr12_132770227_- | SINE | Alu | AluSx1 |
| CAediting_949274 | chr12_132770231_- | SINE | Alu | AluSx1 |
| CAediting_949275 | chr12_132770670_- | SINE | Alu | AluSx |
| CAediting_949276 | chr12_132770672_- | SINE | Alu | AluSx |
| CAediting_949277 | chr12_132770673_- | SINE | Alu | AluSx |
| CAediting_949278 | chr12_132770682_- | SINE | Alu | AluSx |
| CAediting_949279 | chr12_132770692_- | SINE | Alu | AluSx |
| CAediting_949280 | chr12_132770711_- | SINE | Alu | AluSx |
| CAediting_949281 | chr12_132770724_- | SINE | Alu | AluSx |
| CAediting_949282 | chr12_132770731_- | SINE | Alu | AluSx |
| CAediting_949283 | chr12_132770732_- | SINE | Alu | AluSx |
| CAediting_949284 | chr12_132770740_- | SINE | Alu | AluSx |
| CAediting_949285 | chr12_132770746_- | SINE | Alu | AluSx |
| CAediting_949286 | chr12_132770750_- | SINE | Alu | AluSx |
| CAediting_949287 | chr12_132770763_- | SINE | Alu | AluSx |
| CAediting_949288 | chr12_132770767_- | SINE | Alu | AluSx |
| CAediting_949289 | chr12_132770772_- | SINE | Alu | AluSx |
| CAediting_949290 | chr12_132770773_- | SINE | Alu | AluSx |
| CAediting_949291 | chr12_132770775_- | SINE | Alu | AluSx |
| CAediting_949292 | chr12_132770779_- | SINE | Alu | AluSx |
| CAediting_949293 | chr12_132770786_- | SINE | Alu | AluSx |
| CAediting_949294 | chr12_132770799_- | SINE | Alu | AluSx |
| CAediting_949295 | chr12_132770802_- | SINE | Alu | AluSx |
| CAediting_949296 | chr12_132770803_- | SINE | Alu | AluSx |
| CAediting_949297 | chr12_132770804_- | SINE | Alu | AluSx |
| CAediting_949298 | chr12_132770805_- | SINE | Alu | AluSx |
| CAediting_949299 | chr12_132770806_- | SINE | Alu | AluSx |
| CAediting_949300 | chr12_132770808_- | SINE | Alu | AluSx |
| CAediting_949301 | chr12_132770810_- | SINE | Alu | AluSx |
| CAediting_949302 | chr12_132770813_- | SINE | Alu | AluSx |
| CAediting_949303 | chr12_132770814_- | SINE | Alu | AluSx |
| CAediting_949304 | chr12_132770828_- | SINE | Alu | AluSx |
| CAediting_949305 | chr12_132770830_- | SINE | Alu | AluSx |
| CAediting_949306 | chr12_132770831_- | SINE | Alu | AluSx |
| CAediting_949307 | chr12_132770851_- | SINE | Alu | AluSx |
| CAediting_949308 | chr12_132770853_- | SINE | Alu | AluSx |
| CAediting_949309 | chr12_132770862_- | SINE | Alu | AluSx |
| CAediting_949310 | chr12_132770867_- | SINE | Alu | AluSx |
| CAediting_949311 | chr12_132770872_- | SINE | Alu | AluSx |
| CAediting_949312 | chr12_132770885_- | SINE | Alu | AluSx |
| CAediting_949313 | chr12_132770891_- | SINE | Alu | AluSx |
| CAediting_949314 | chr12_132770902_- | SINE | Alu | AluSx |
| CAediting_949315 | chr12_132770907_- | SINE | Alu | AluSx |
| CAediting_949316 | chr12_132770916_- | SINE | Alu | AluSx |
| CAediting_949319 | chr12_132772278_- | SINE | Alu | AluSz |
| CAediting_949320 | chr12_132772285_- | SINE | Alu | AluSz |
| CAediting_949321 | chr12_132772299_- | SINE | Alu | AluSz |
| CAediting_949322 | chr12_132772300_- | SINE | Alu | AluSz |
| CAediting_949323 | chr12_132772309_- | SINE | Alu | AluSz |
| CAediting_949324 | chr12_132772314_- | SINE | Alu | AluSz |
| CAediting_949325 | chr12_132772322_- | SINE | Alu | AluSz |
| CAediting_949326 | chr12_132772326_- | SINE | Alu | AluSz |
| CAediting_949327 | chr12_132772327_- | SINE | Alu | AluSz |
| CAediting_949328 | chr12_132772352_- | SINE | Alu | AluSz |
| CAediting_949329 | chr12_132772364_- | SINE | Alu | AluSz |
| CAediting_949330 | chr12_132772378_- | SINE | Alu | AluSz |
| CAediting_949331 | chr12_132772381_- | SINE | Alu | AluSz |
| CAediting_949332 | chr12_132772396_- | SINE | Alu | AluSz |
| CAediting_949333 | chr12_132772406_- | SINE | Alu | AluSz |
| CAediting_949334 | chr12_132772409_- | SINE | Alu | AluSz |
| CAediting_949335 | chr12_132772420_- | SINE | Alu | AluSz |
| CAediting_949336 | chr12_132772422_- | SINE | Alu | AluSz |
| CAediting_949337 | chr12_132772432_- | SINE | Alu | AluSz |
| CAediting_949338 | chr12_132772457_- | SINE | Alu | AluSz |
| CAediting_949339 | chr12_132772462_- | SINE | Alu | AluSz |
| CAediting_949340 | chr12_132772518_- | SINE | Alu | AluSz |
| CAediting_949341 | chr12_132772538_- | SINE | Alu | AluSz |
| CAediting_949342 | chr12_132772540_- | SINE | Alu | AluSz |
| CAediting_949343 | chr12_132778771_- | SINE | Alu | AluSc8 |
| CAediting_949344 | chr12_132778812_- | SINE | Alu | AluSc8 |
| CAediting_949345 | chr12_132779325_- | SINE | Alu | AluSp |
| CAediting_949346 | chr12_132779352_- | SINE | Alu | AluSp |
| CAediting_949347 | chr12_132782620_- | SINE | Alu | AluSx |
| CAediting_949348 | chr12_132782634_- | SINE | Alu | AluSx |
| CAediting_949349 | chr12_132782672_- | SINE | Alu | AluSx |
| CAediting_949350 | chr12_132782674_- | SINE | Alu | AluSx |
| CAediting_949351 | chr12_132782697_- | SINE | Alu | AluSx |
| CAediting_949352 | chr12_132782714_- | SINE | Alu | AluSx |
| CAediting_949353 | chr12_132782729_- | SINE | Alu | AluSx |
| CAediting_949354 | chr12_132782752_- | SINE | Alu | AluSx |
| CAediting_949355 | chr12_132782754_- | SINE | Alu | AluSx |
| CAediting_949356 | chr12_132782764_- | SINE | Alu | AluSx |
| CAediting_949357 | chr12_132782767_- | SINE | Alu | AluSx |
| CAediting_949358 | chr12_132782793_- | SINE | Alu | AluSx |
| CAediting_949359 | chr12_132782819_- | SINE | Alu | AluSx |
| CAediting_949360 | chr12_132782824_- | SINE | Alu | AluSx |
| CAediting_949361 | chr12_132782830_- | SINE | Alu | AluSx |
| CAediting_949362 | chr12_132782832_- | SINE | Alu | AluSx |
| CAediting_949363 | chr12_132782963_- | SINE | Alu | AluSg |
| CAediting_949364 | chr12_132782975_- | SINE | Alu | AluSg |
| CAediting_949365 | chr12_132782976_- | SINE | Alu | AluSg |
| CAediting_949366 | chr12_132783024_- | SINE | Alu | AluSg |
| CAediting_949367 | chr12_132783028_- | SINE | Alu | AluSg |
| CAediting_949368 | chr12_132783030_- | SINE | Alu | AluSg |
| CAediting_949369 | chr12_132783039_- | SINE | Alu | AluSg |
| CAediting_949370 | chr12_132783048_- | SINE | Alu | AluSg |
| CAediting_949371 | chr12_132783072_- | SINE | Alu | AluSg |
| CAediting_949372 | chr12_132783074_- | SINE | Alu | AluSg |
| CAediting_949373 | chr12_132783077_- | SINE | Alu | AluSg |
| CAediting_949374 | chr12_132783078_- | SINE | Alu | AluSg |
| CAediting_949375 | chr12_132783084_- | SINE | Alu | AluSg |
| CAediting_949376 | chr12_132783109_- | SINE | Alu | AluSg |
| CAediting_949377 | chr12_132783113_- | SINE | Alu | AluSg |
| CAediting_949378 | chr12_132783114_- | SINE | Alu | AluSg |
| CAediting_949379 | chr12_132783120_- | SINE | Alu | AluSg |
| CAediting_949380 | chr12_132783134_- | SINE | Alu | AluSg |
| CAediting_949381 | chr12_132783150_- | SINE | Alu | AluSg |
| CAediting_949382 | chr12_132783176_- | SINE | Alu | AluSg |
| CAediting_949383 | chr12_132783184_- | SINE | Alu | AluSg |
| CAediting_949384 | chr12_132783186_- | SINE | Alu | AluSg |
| CAediting_949385 | chr12_132783188_- | SINE | Alu | AluSg |
| CAediting_949386 | chr12_132783612_- | SINE | Alu | AluSx1 |
| CAediting_949387 | chr12_132783646_- | SINE | Alu | AluSx1 |
| CAediting_949388 | chr12_132783647_- | SINE | Alu | AluSx1 |
| CAediting_949389 | chr12_132783662_- | SINE | Alu | AluSx1 |
| CAediting_949390 | chr12_132783674_- | SINE | Alu | AluSx1 |
| CAediting_949391 | chr12_132783675_- | SINE | Alu | AluSx1 |
| CAediting_949392 | chr12_132783689_- | SINE | Alu | AluSx1 |
| CAediting_949393 | chr12_132783706_- | SINE | Alu | AluSx1 |
| CAediting_949394 | chr12_132783716_- | SINE | Alu | AluSx1 |
| CAediting_949395 | chr12_132783742_- | SINE | Alu | AluSx1 |
| CAediting_949396 | chr12_132783745_- | SINE | Alu | AluSx1 |
| CAediting_949397 | chr12_132783746_- | SINE | Alu | AluSx1 |
| CAediting_949398 | chr12_132783747_- | SINE | Alu | AluSx1 |
| CAediting_949399 | chr12_132783748_- | SINE | Alu | AluSx1 |
| CAediting_949400 | chr12_132783754_- | SINE | Alu | AluSx1 |
| CAediting_949401 | chr12_132783755_- | SINE | Alu | AluSx1 |
| CAediting_949402 | chr12_132783757_- | SINE | Alu | AluSx1 |
| CAediting_949403 | chr12_132783760_- | SINE | Alu | AluSx1 |
| CAediting_949404 | chr12_132783766_- | SINE | Alu | AluSx1 |
| CAediting_949405 | chr12_132783771_- | SINE | Alu | AluSx1 |
| CAediting_949406 | chr12_132783772_- | SINE | Alu | AluSx1 |
| CAediting_949407 | chr12_132783773_- | SINE | Alu | AluSx1 |
| CAediting_949408 | chr12_132783791_- | SINE | Alu | AluSx1 |
| CAediting_949409 | chr12_132783848_- | SINE | Alu | AluSx1 |
| CAediting_949410 | chr12_132783849_- | SINE | Alu | AluSx1 |
| CAediting_949411 | chr12_132783857_- | SINE | Alu | AluSx1 |
| CAediting_949412 | chr12_132783870_- | SINE | Alu | AluSx1 |
| CAediting_949413 | chr12_132795639_- | SINE | Alu | AluSz6 |
| CAediting_949414 | chr12_132795649_- | SINE | Alu | AluSz6 |
| CAediting_949415 | chr12_132795685_- | SINE | Alu | AluSz6 |
| CAediting_949416 | chr12_132799442_- | SINE | Alu | AluJo |
| CAediting_949417 | chr12_132799445_- | SINE | Alu | AluJo |
| CAediting_949418 | chr12_132799471_- | SINE | Alu | AluJo |
| CAediting_949419 | chr12_132799472_- | SINE | Alu | AluJo |
| CAediting_949420 | chr12_132799517_- | SINE | Alu | AluJo |
| CAediting_949421 | chr12_132799554_- | SINE | Alu | AluJo |
| CAediting_949422 | chr12_132799556_- | SINE | Alu | AluJo |
| CAediting_949423 | chr12_132799588_- | SINE | Alu | AluJo |
| CAediting_949424 | chr12_132799606_- | SINE | Alu | AluJo |
| CAediting_949425 | chr12_132799637_- | SINE | Alu | AluJo |
| CAediting_949426 | chr12_132799769_- | SINE | Alu | AluSz6 |
| CAediting_949427 | chr12_132799771_- | SINE | Alu | AluSz6 |
| CAediting_949428 | chr12_132799808_- | SINE | Alu | AluSz6 |
| CAediting_949429 | chr12_132799837_- | SINE | Alu | AluSz6 |
| CAediting_949430 | chr12_132799869_- | SINE | Alu | AluSz6 |
| CAediting_949431 | chr12_132799873_- | SINE | Alu | AluSz6 |
| CAediting_949432 | chr12_132799879_- | SINE | Alu | AluSz6 |
| CAediting_949433 | chr12_132799901_- | SINE | Alu | AluSz6 |
| CAediting_949434 | chr12_132800013_- | SINE | Alu | AluSz6 |
| CAediting_949435 | chr12_132800014_- | SINE | Alu | AluSz6 |
| CAediting_949436 | chr12_132800027_- | SINE | Alu | AluSz6 |
| CAediting_949437 | chr12_132800030_- | SINE | Alu | AluSz6 |
| CAediting_949438 | chr12_132800309_- | SINE | Alu | AluSg |
| CAediting_949439 | chr12_132800372_- | SINE | Alu | AluSg |
| CAediting_949440 | chr12_132800394_- | SINE | Alu | AluSg |
| CAediting_949441 | chr12_132800726_- | SINE | Alu | AluJb |
| CAediting_949442 | chr12_132800767_- | SINE | Alu | AluJb |
| CAediting_949443 | chr12_132800793_- | SINE | Alu | AluJb |
| CAediting_949444 | chr12_132800824_- | SINE | Alu | AluJb |
| CAediting_949445 | chr12_132800837_- | SINE | Alu | AluJb |
| CAediting_949446 | chr12_132800877_- | SINE | Alu | AluJb |
| CAediting_949447 | chr12_132800883_- | SINE | Alu | AluJb |
| CAediting_949448 | chr12_132800890_- | SINE | Alu | AluJb |
| CAediting_949449 | chr12_132800891_- | SINE | Alu | AluJb |
| CAediting_949450 | chr12_132800907_- | SINE | Alu | AluJb |
| CAediting_949451 | chr12_132800957_- | SINE | Alu | AluJb |
| CAediting_949452 | chr12_132809203_- | LTR | ERVK | LTR13 |
| CAediting_949453 | chr12_132809847_- | LTR | ERVK | LTR13 |
| CAediting_949454 | chr12_132809853_- | LTR | ERVK | LTR13 |
| CAediting_949455 | chr12_132809854_- | LTR | ERVK | LTR13 |
| CAediting_949456 | chr12_132812102_- | SINE | Alu | AluSx |
| CAediting_949457 | chr12_132812106_- | SINE | Alu | AluSx |
| CAediting_949458 | chr12_132812111_- | SINE | Alu | AluSx |
| CAediting_949459 | chr12_132812161_- | SINE | Alu | AluSx |
| CAediting_949460 | chr12_132813822_- | SINE | Alu | AluY |
| CAediting_949461 | chr12_132813836_- | SINE | Alu | AluY |
| CAediting_949462 | chr12_132813863_- | SINE | Alu | AluY |
| CAediting_949463 | chr12_132813889_- | SINE | Alu | AluY |
| CAediting_949464 | chr12_132814162_- | SINE | Alu | AluSp |
| CAediting_949465 | chr12_132814163_- | SINE | Alu | AluSp |
| CAediting_949466 | chr12_132814297_- | SINE | Alu | AluSp |
| CAediting_949467 | chr12_132814299_- | SINE | Alu | AluSp |
| CAediting_949468 | chr12_132815637_- | SINE | Alu | AluJb |
| CAediting_949469 | chr12_132815651_- | SINE | Alu | AluJb |
| CAediting_949470 | chr12_132815727_- | SINE | Alu | AluJb |
| CAediting_949471 | chr12_132815778_- | SINE | Alu | AluJb |
| CAediting_949472 | chr12_132818313_- | SINE | Alu | AluSx1 |
| CAediting_949473 | chr12_132818356_- | SINE | Alu | AluSx1 |
| CAediting_949474 | chr12_132818374_- | SINE | Alu | AluSx1 |
| CAediting_949475 | chr12_132818381_- | SINE | Alu | AluSx1 |
| CAediting_949476 | chr12_132818388_- | SINE | Alu | AluSx1 |
| CAediting_949477 | chr12_132818397_- | SINE | Alu | AluSx1 |
| CAediting_949478 | chr12_132818398_- | SINE | Alu | AluSx1 |
| CAediting_949479 | chr12_132818404_- | SINE | Alu | AluSx1 |
| CAediting_949480 | chr12_132818420_- | SINE | Alu | AluSx1 |
| CAediting_949481 | chr12_132818465_- | SINE | Alu | AluSx1 |
| CAediting_949482 | chr12_132818488_- | SINE | Alu | AluSx1 |
| CAediting_949483 | chr12_132818527_- | SINE | Alu | AluSx1 |
| CAediting_949484 | chr12_132820093_- | SINE | Alu | AluSp |
| CAediting_949485 | chr12_132820287_- | SINE | Alu | AluJr |
| CAediting_949486 | chr12_132820865_- | SINE | Alu | AluSx1 |
| CAediting_949487 | chr12_132823804_- | SINE | Alu | AluSz |
| CAediting_949488 | chr12_132823838_- | SINE | Alu | AluSz |
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RNA A-to-I editing events in the alternative splicing sites for GOLGA3 |
| RNA A-to-I editing(s) in the alternative splicing sites. |
| AStype | CAeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
| IR | CAediting_949281 | chr12_132770724_- | 132770720:132770742 | 3SS | 0+2i | GAATCACTTGAACCCAGGAGGCG | -15.68 | GAATCACTTGAACCCAGGGGGCG | -23.64 |
| IR | CAediting_949282 | chr12_132770731_- | 132770720:132770742 | 3SS | 0+9i | GAATCACTTGAACCCAGGAGGCG | -15.68 | GAATCACTTGAGCCCAGGAGGCG | -20.29 |
| IR | CAediting_949283 | chr12_132770732_- | 132770720:132770742 | 3SS | 0+10i | GAATCACTTGAACCCAGGAGGCG | -15.68 | GAATCACTTGGACCCAGGAGGCG | -15.25 |
| IR | CAediting_949284 | chr12_132770740_- | 132770720:132770742 | 3SS | 0+18i | GAATCACTTGAACCCAGGAGGCG | -15.68 | GAGTCACTTGAACCCAGGAGGCG | -16.02 |
| IR | CAediting_949320 | chr12_132772285_- | 132772281:132772303 | 3SS | 0+2i | CCAAAGTGCTGGGATTACAGGCG | -1.62 | CCAAAGTGCTGGGATTACGGGCG | -9.57 |
| IR | CAediting_949321 | chr12_132772299_- | 132772281:132772303 | 3SS | 0+16i | CCAAAGTGCTGGGATTACAGGCG | -1.62 | CCAAGGTGCTGGGATTACAGGCG | -1.12 |
| IR | CAediting_949322 | chr12_132772300_- | 132772281:132772303 | 3SS | 0+17i | CCAAAGTGCTGGGATTACAGGCG | -1.62 | CCAGAGTGCTGGGATTACAGGCG | -2.23 |
| IR | CAediting_949335 | chr12_132772420_- | 132772412:132772420 | 5SS | 3+0i | AGGCGTGCG | -26.75 | GGGCGTGCG | -30.36 |
| IR | CAediting_949340 | chr12_132772518_- | 132772510:132772518 | 5SS | 3+0i | AGGCTGGAG | -12.94 | GGGCTGGAG | -15.85 |
| Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000090615.11.GOLGA3. |
| Correlation between RNA A-to-I editing and PSI for ENSG00000090615.11.GOLGA3. |
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Differntial gene expression between RNA A-to-I edited versus non-edited samples for GOLGA3 |
| Differential gene expressions between RNA A-to-I edited and non-edited tumor samples. * The grey color means N/A. |
 | |
| Correlation between RNA A-to-I editing and gene expression. |
 | |
| - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
TGCT.CAediting_949247.ENSG00000090615.GOLGA3.png  |
TGCT.CAediting_949250.ENSG00000090615.GOLGA3.png  |
THYM.CAediting_949247.ENSG00000090615.GOLGA3.png  |
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Protein coding region RNA A-to-I editings for GOLGA3 |
| - Lollipop plot for RNA A-to-I editings across protein structure. * Click on the image to enlarge it in a new window. |
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The effects of the RNA editing to the miRNA binding sites for GOLGA3 |
| **If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page. |
| RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites. |
| CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites. |
| CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in lncRNA gained miRNA binding sites. |
| CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in lncRNA lost miRNA binding sites. |
| CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs gained binding to lncRNA. |
| CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs lost binding to lncRNA. |
| CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA. |
| CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| CAediting_1368054 | chr19_46709310_- | ENSG00000090615.11 | ENST00000541013 | hsa-miR-320e | 132774292 | 132774298 | 7mer-m8 | 132774291 | 132774308 | 143 | -16.55 |
| CAediting_396018 | chr5_1062918_- | ENSG00000090615.11 | ENST00000541013 | hsa-miR-4635 | 132774185 | 132774192 | 8mer-1a | 132774185 | 132774205 | 140 | -15.74 |
| CAediting_1229413 | chr17_67471544_+ | ENSG00000090615.11 | ENST00000456883 | hsa-miR-548aa | 132774962 | 132774969 | 8mer-1a | 132774962 | 132774988 | 157 | -10.48 |
| CAediting_77128 | chr1_85133844_+ | ENSG00000090615.11 | ENST00000456883 | hsa-miR-4423-3p | 132774822 | 132774828 | 7mer-m8 | 132774821 | 132774841 | 140 | -14.32 |
| CAediting_524911 | chr7_5495852_- | ENSG00000090615.11 | ENST00000456883 | hsa-miR-589-3p | 132774534 | 132774540 | 7mer-m8 | 132774533 | 132774555 | 154 | -19.87 |
| RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA. |
| CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| CAediting_1524209 | chrX_134546392_- | ENSG00000090615.11 | ENST00000541013 | hsa-miR-503-5p | 132774235 | 132774241 | 7mer-m8 | 132774234 | 132774256 | 148 | -21.85 |
| CAediting_1229413 | chr17_67471544_+ | ENSG00000090615.11 | ENST00000456883 | hsa-miR-548aa | 132774529 | 132774535 | 7mer-m8 | 132774528 | 132774552 | 142 | -5.6 |
| CAediting_1229414 | chr17_67471546_+ | ENSG00000090615.11 | ENST00000456883 | hsa-miR-548aa | 132774529 | 132774535 | 7mer-m8 | 132774528 | 132774552 | 142 | -5.6 |
| Differentially expressed gene-miRNA network |
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The effects of the RNA editing to the stability of the RNA structures for GOLGA3 |
| - RNA A-to-I editing in mRNA. * Click on the image to enlarge it in a new window. |
| ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
| RNA A-to-I editing in RNA structures for Minimum free energy (MFE). |
| CAeditom_ID | ENST | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
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Relation with ADAR for GOLGA3 |
| Correlation between ADAR gene expression and RNA editing frequency |
| Cancer | CAeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| CESC | CAediting_949245 | chr12_132769969_- | 0.0189081508233792 | 0.27606846923936 | . | . | . | . |
| LUAD | CAediting_949245 | chr12_132769969_- | 0.0439093238791708 | 0.185850762975248 | . | . | . | . |
| GBM | CAediting_949245 | chr12_132769969_- | 0.000729674245098586 | 0.365662836599339 | 0.0206142713798539 | 0.255313286973191 | . | . |
| STAD | CAediting_949245 | chr12_132769969_- | 0.00556734938775399 | 0.218906416236722 | . | . | . | . |
| BLCA | CAediting_949247 | chr12_132769978_- | 9.23935607493595e-06 | 0.293998393966925 | . | . | . | . |
| LGG | CAediting_949247 | chr12_132769978_- | . | . | 1.48320136641014e-06 | 0.22686217932995 | . | . |
| BRCA | CAediting_949247 | chr12_132769978_- | 6.38948097978943e-08 | 0.178553250965439 | . | . | . | . |
| CESC | CAediting_949247 | chr12_132769978_- | 0.00502115375168323 | 0.192033113522126 | . | . | . | . |
| LUAD | CAediting_949247 | chr12_132769978_- | 7.51830082472346e-08 | 0.283790057097505 | . | . | . | . |
| PRAD | CAediting_949247 | chr12_132769978_- | 0.0339330621587444 | 0.112602800554953 | . | . | . | . |
| STAD | CAediting_949247 | chr12_132769978_- | 3.87959810460184e-05 | 0.242850746181579 | . | . | . | . |
| THCA | CAediting_949247 | chr12_132769978_- | 3.13318078354634e-05 | 0.211308725933874 | . | . | . | . |
| OV | CAediting_949247 | chr12_132769978_- | 3.60042728426206e-05 | 0.223709283971615 | . | . | . | . |
| PCPG | CAediting_949247 | chr12_132769978_- | 0.045786444673241 | 0.1547898876041 | . | . | . | . |
| SKCM | CAediting_949247 | chr12_132769978_- | 0.000976786142736073 | 0.173782420481233 | . | . | . | . |
| SARC | CAediting_949247 | chr12_132769978_- | 2.08792201897791e-05 | 0.287749699811303 | . | . | . | . |
| TGCT | CAediting_949247 | chr12_132769978_- | 0.000432568708550624 | 0.332816689437186 | . | . | . | . |
| THYM | CAediting_949247 | chr12_132769978_- | 8.10106586266766e-06 | 0.580201995135686 | . | . | . | . |
| BLCA | CAediting_949250 | chr12_132770000_- | 9.79377681588016e-08 | 0.321459095120864 | . | . | . | . |
| LGG | CAediting_949250 | chr12_132770000_- | 0.0025283892270509 | 0.164242172596565 | 0.0204550184748351 | 0.126414950815748 | . | . |
| BRCA | CAediting_949250 | chr12_132770000_- | 5.19685088699309e-08 | 0.180342357921813 | 7.45334646107015e-05 | 0.131724931714246 | . | . |
| CESC | CAediting_949250 | chr12_132770000_- | 0.000220389713196425 | 0.233940604726054 | . | . | . | . |
| LUAD | CAediting_949250 | chr12_132770000_- | 0.024118298959583 | 0.114485134223263 | . | . | . | . |
| PRAD | CAediting_949250 | chr12_132770000_- | 0.0254178183057393 | 0.116191092067626 | . | . | . | . |
| HNSC | CAediting_949250 | chr12_132770000_- | 0.000338759506214705 | 0.181245084336102 | 0.00117323295729373 | 0.16437654270063 | . | . |
| STAD | CAediting_949250 | chr12_132770000_- | 0.00208553136587494 | 0.179418886451172 | . | . | . | . |
| ACC | CAediting_949250 | chr12_132770000_- | 0.0109287346728396 | 0.334720126639737 | . | . | . | . |
| OV | CAediting_949250 | chr12_132770000_- | 5.95467331526463e-06 | 0.24418292023902 | . | . | . | . |
| SKCM | CAediting_949250 | chr12_132770000_- | 0.000372895783860113 | 0.189437273262974 | . | . | . | . |
| MESO | CAediting_949250 | chr12_132770000_- | . | . | 0.010193893949607 | 0.318997095256144 | . | . |
| SARC | CAediting_949250 | chr12_132770000_- | 0.00247147740312145 | 0.200405260028362 | . | . | . | . |
| TGCT | CAediting_949250 | chr12_132770000_- | 0.000462512365074778 | 0.318660578016238 | . | . | . | . |
| THYM | CAediting_949250 | chr12_132770000_- | 0.0203922605348271 | 0.306522237396781 | . | . | . | . |
| BRCA | CAediting_949254 | chr12_132770042_- | . | . | 0.00605276159529717 | 0.121394688748479 | . | . |
| BRCA | CAediting_949265 | chr12_132770121_- | . | . | 0.00133811959639425 | 0.246233762468128 | . | . |
| SARC | CAediting_949265 | chr12_132770121_- | 0.0149811975877356 | 0.302893032930295 | . | . | . | . |
| BLCA | CAediting_949267 | chr12_132770150_- | . | . | 0.0167148394090171 | 0.271985042095487 | . | . |
| COAD | CAediting_949267 | chr12_132770150_- | . | . | . | . | 0.00752283299318956 | 0.278466690204356 |
| STAD | CAediting_949273 | chr12_132770227_- | . | . | . | . | 0.0239973277075668 | 0.211338806225912 |
| BLCA | CAediting_949293 | chr12_132770786_- | 3.74665022956013e-05 | 0.220338496212337 | . | . | . | . |
| LGG | CAediting_949293 | chr12_132770786_- | 0.0408164799745829 | 0.0935935438990052 | . | . | . | . |
| BRCA | CAediting_949293 | chr12_132770786_- | 0.00021959243428707 | 0.115347459713089 | 0.0291585937532616 | 0.0682373716926045 | . | . |
| CESC | CAediting_949293 | chr12_132770786_- | 0.0374821885624885 | 0.13062494249815 | . | . | . | . |
| LUAD | CAediting_949293 | chr12_132770786_- | 5.92457749768704e-07 | 0.230319731276278 | . | . | . | . |
| PRAD | CAediting_949293 | chr12_132770786_- | 0.040361679089446 | 0.0960429501451012 | 0.0190062471903964 | 0.109802897099882 | . | . |
| HNSC | CAediting_949293 | chr12_132770786_- | . | . | 0.029451745131978 | 0.103116635468763 | . | . |
| STAD | CAediting_949293 | chr12_132770786_- | 0.034315825599759 | 0.140855352898606 | . | . | . | . |
| KICH | CAediting_949293 | chr12_132770786_- | . | . | 0.000929814058327673 | 0.441691875073127 | . | . |
| MESO | CAediting_949293 | chr12_132770786_- | 0.00443005094215229 | 0.322990158218778 | . | . | . | . |
| TGCT | CAediting_949293 | chr12_132770786_- | 2.10120435038038e-05 | 0.358542341181905 | . | . | . | . |
| THYM | CAediting_949293 | chr12_132770786_- | 0.0147792949537674 | 0.25483350214028 | . | . | 0.00483007193247167 | 0.292961390107715 |
| BRCA | CAediting_949316 | chr12_132770916_- | . | . | 0.00766837779142968 | 0.172084412511593 | . | . |
| KIRC | CAediting_949316 | chr12_132770916_- | . | . | . | . | 0.00215673094615362 | 0.348891484833395 |
| LUAD | CAediting_949366 | chr12_132783024_- | 0.00967585007285958 | 0.295024882181049 | . | . | . | . |
| LUSC | CAediting_949368 | chr12_132783030_- | . | . | . | . | 0.0497142710064705 | 0.27626790536429 |
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Relation with cancer stages for GOLGA3 |
| Correlation between Cancer stages and RNA editing frequency |
| Cancer | Stage_type | CAeditomID | position | P-val | Coeff. |
| BLCA | pathologic_stage | CAediting_949293 | chr12_132770786_- | 0.0488909614908503 | 0.106587260992735 |
| BRCA | pathologic_stage | CAediting_949250 | chr12_132770000_- | 0.0278058565938548 | 0.074123631398668 |
| BRCA | pathologic_stage | CAediting_949268 | chr12_132770151_- | 0.0175616288026377 | 0.291499981118359 |
| BRCA | pathologic_stage | CAediting_949294 | chr12_132770799_- | 0.032612098686952 | 0.212828956827418 |
| CESC | clinical_stage | CAediting_949250 | chr12_132770000_- | 0.0205858737688016 | 0.149404694127737 |
| KIRP | pathologic_stage | CAediting_949293 | chr12_132770786_- | 0.000207655396236242 | 0.274610193943437 |
| LUAD | pathologic_stage | CAediting_949247 | chr12_132769978_- | 0.00619432206914683 | 0.147529999477352 |
| LUAD | pathologic_stage | CAediting_949293 | chr12_132770786_- | 0.0226208997415402 | 0.107100935273848 |
| LUSC | pathologic_stage | CAediting_949245 | chr12_132769969_- | 0.0287532246765419 | 0.231914239835416 |
| LUSC | pathologic_stage | CAediting_949316 | chr12_132770916_- | 0.0247369569750675 | 0.208449750075224 |
| TGCT | clinical_stage | CAediting_949247 | chr12_132769978_- | 0.017822846221198 | -0.297661009140177 |
| TGCT | clinical_stage | CAediting_949267 | chr12_132770150_- | 0.0427094717221244 | -0.339628855744323 |
| TGCT | pathologic_stage | CAediting_949247 | chr12_132769978_- | 0.00298688622567128 | -0.376986373242766 |
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Relation with survival for GOLGA3 |
| Correlation between RNA editing and survival |
| Cancer | CAeditomID | position | KMpvalue | Coxpvalue | CoxHR |
| BRCA | CAediting_949316 | chr12_132770916_- | 0.0457261702981218 | 0.0274883 | 259.378 |
| LUAD | CAediting_949368 | chr12_132783030_- | 0.0173552532540873 | 0.0206144 | 0.0026922 |
| PRAD | CAediting_949250 | chr12_132770000_- | 0.0344133725409935 | 0.0438425 | 4.21992e+14 |
| PAAD | CAediting_949250 | chr12_132770000_- | 0.00590716846397066 | 0.000162794 | 231023000 |
| READ | CAediting_949254 | chr12_132770042_- | 0.0309242544880038 | 0.0267126 | 17688500000 |
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RelatedDrugs for GOLGA3 |
| Approved drugs targeting this gene. (DrugBank Version 5.1.8 2021-01-03) |
| Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for GOLGA3 |
| Diseases associated with this gene. (DisGeNet 7.0) |
| Gene | Disease ID | Disease name | # pubmeds | Source |
